Rorug02G0174600
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000662
Physical Location & Seq
Reverse (-)
16000364 .. 16004704
4341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0174600.1

Sequence Viewer

Length: 1434 bp
ATGAATACTGTTCTTTTATACTGTTTTGTATTTGCTCTACTCTCTTTCATATTACTTGGAAAACAAACGAGAAACAAACCCCGAGCAAAGCTTCCTCCAGGTTCAATGGGATGGCCATATCTTGGAGAAACCCTGCAACTCTACTCTCAAAATCCAAATGTCTTCTTTGGCACTAGGCAGCAAAGGTATGGAGAAATTTTCAAGACCCATATTCTTGGGAGCCCTGGTGTGATGCTGTGTAGCCCAGAGGCTATCCGGTTTGTGTTGGTGACTCAGGCACATTTGTTTAAGCCAACATACCCTAAAAGTAAGGAAAAATTGATTGGCCCCTCGGCACTTTTCTTCCACCAAGATGACTACCATACTCAAATGAGAAGATTAGTCCAAGAATCACTGTCCTTGGATGCTATCAAGAACTTAGTCCCGGATATTGAAGCCATTGCCATTTCTACCTTGGACTCATGGTCTGGTGGGCAAATTGTCAACACCTTTTATGAATTGAAGAAGTTCACTTTTGATGTTGCTGCATTGTTTATCTTCGGTCGCTTGAACACTCACTACAAAGAACAGCTAAAGAAAAACTACTTCACTCTAGACAAAGGTTACAATTGTTTCCCTATAAACCTACCAGGCTCTTCATACAATAAGTCGGTCTTGGCAAGGAGAAGGCTAAGCTTAATTCTCGGTGAGATAATAAAGGAGAGAAAGGAAAATAAATTGGTCGAGAAAGATCTATTGGGAAGCTTATTGAAGTTCAAGGATGAACAGGGTCAAACCTTAACACACAACCAGATCCTTGATAACATTATTGGGGTATTGTTTGCTGCTCAGGACACCACAGCTACTCTCCTGACTTGGATTCTCAAATACATGCACGATTACTCTGAACTTCTAGAAGCTATTCAGGTAGAACAGAAGGCAATTTTTGCAGCAAATGAGGGTGGAAACCAGTCGCTCAGTTGGGCTCAAACTAGAAATATGCCCCTTACCAGTAGGGCTATAAAGGAGAGTTTGAGGATGGCAAGCATAATTTCTTTCACCTTCAGAGAAGCCGTTGAAGACGTTGAATATAAAGGATACTTGATCCGAAAGGGATGGAAGGTACTGCCTTTGTTCCGGAACATTCATCACAATCCTGATTTTTTCAATGAACCCCATAATTTCAATCCATCAAGATTTGAGCTTGGAATAAGACCCAATACGTTCGTGCCATTTGGCAATGGAGTTCATACTTGTCCTGGAAATGAAGTTGCCAAGACTGAGATACTTATTTTCATCTACCACCTCGTTAACAAGTTCAGGTGGGAAGCAGCAGCGTCCGATGGTGGGATTCATTATGACCCATTTCCGGTACCTCAGCAAGGACTTCCGGCCAAATTTTGGAAAGAGTATTCCGGCAGCCAAGGAGCGCTGTATGATAAAAGAGCAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03018 ko04212 ko05152 map03018 map04212 map05152
Pfam Domains
Protein Families
HSP70

Protein Analysis

477

Amino Acids

54.54

Weight (kDa)

9.22

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 437 1.1e-67 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1351
AccB1I GGYRCC 1 cut(s) 1351
AccB7I CCANNNNNTGG 2 cut(s) 122, 1380
AccIII TCCGGA 1 cut(s) 1116
AclWI GGATC 2 cut(s) 787, 1078
AcoI YGGCCR 2 cut(s) 113, 1371
AcsI RAATTY 2 cut(s) 195, 1376
AcuI CTGAAG 1 cut(s) 1027
AfaI GTAC 2 cut(s) 1104, 1353
AfeI AGCGCT 1 cut(s) 1410
AfiI CCNNNNNNNGG 5 cut(s) 122, 1326, 1348, 1361, 1380
AhdI GACNNNNNGTC 1 cut(s) 463
AjnI CCWGG 4 cut(s) 97, 223, 628, 1237
AjuI GAANNNNNNNTTGG 4 cut(s) 306, 338, 719, 751
AluBI AGCT 7 cut(s) 91, 571, 675, 744, 842, 899, 1183
AluI AGCT 7 cut(s) 91, 571, 675, 744, 842, 899, 1183
AlwI GGATC 2 cut(s) 787, 1078
Ama87I CYCGRG 1 cut(s) 81
Aor13HI TCCGGA 1 cut(s) 1116
Aor51HI AGCGCT 1 cut(s) 1410
AoxI GGCC 3 cut(s) 113, 325, 1371
ApeKI GCWGC 7 cut(s) 178, 524, 824, 929, 1310, 1313, 1398
ApoI RAATTY 2 cut(s) 195, 1376
Asp700I GAANNNNTTC 2 cut(s) 506, 900
Asp718I GGTACC 1 cut(s) 1351
AspLEI GCGC 1 cut(s) 1411
AspS9I GGNCC 1 cut(s) 326
AsuC2I CCSGG 1 cut(s) 425
AsuHPI GGTGA 3 cut(s) 280, 698, 1030
AvaI CYCGRG 1 cut(s) 81
BalI TGGCCA 1 cut(s) 115
BanI GGYRCC 1 cut(s) 1351
BanII GRGCYC 2 cut(s) 224, 967
BbsI GAAGAC 2 cut(s) 154, 1065
BbvCI CCTCAGC 1 cut(s) 1356
BbvI GCAGC 7 cut(s) 190, 511, 811, 941, 1322, 1325, 1410
BccI CCATC 5 cut(s) 105, 1012, 1089, 1177, 1316
BceAI ACGGC 1 cut(s) 1037
BciT130I CCWGG 4 cut(s) 99, 225, 630, 1239
BciVI GTATCC 1 cut(s) 1070
BcnI CCSGG 1 cut(s) 425
BfaI CTAG 5 cut(s) 174, 593, 893, 972, 1432
BfoI RGCGCY 1 cut(s) 1412
BfuI GTATCC 1 cut(s) 1070
BglII AGATCT 1 cut(s) 730
BisI GCNGC 7 cut(s) 179, 525, 825, 930, 1311, 1314, 1399
BlpI GCTNAGC 1 cut(s) 671
BlsI GCNGC 7 cut(s) 180, 526, 826, 931, 1312, 1315, 1400
Bme1390I CCNGG 5 cut(s) 99, 225, 425, 630, 1239
BmeRI GACNNNNNGTC 1 cut(s) 463
BmeT110I CYCGRG 1 cut(s) 81
BmgT120I GGNCC 1 cut(s) 326
BmiI GGNNCC 3 cut(s) 221, 328, 1353
BmrFI CCNGG 5 cut(s) 99, 225, 425, 630, 1239
BmsI GCATC 2 cut(s) 222, 394
BpiI GAAGAC 2 cut(s) 154, 1065
BpmI CTGGAG 1 cut(s) 81
Bpu10I CCTNAGC 2 cut(s) 828, 1356
Bpu1102I GCTNAGC 1 cut(s) 671
BpuMI CCSGG 1 cut(s) 425
BsaJI CCNNGG 5 cut(s) 223, 330, 399, 453, 1402
BsaWI WCCGGW 3 cut(s) 255, 1116, 1348
BsaXI ACNNNNNCTCC 2 cut(s) 211, 241
Bsc4I CCNNNNNNNGG 5 cut(s) 122, 1326, 1348, 1361, 1380
Bse1I ACTGG 2 cut(s) 949, 990
Bse3DI GCAATG 2 cut(s) 438, 1225
BseAI TCCGGA 1 cut(s) 1116
BseBI CCWGG 4 cut(s) 99, 225, 630, 1239
BseDI CCNNGG 5 cut(s) 223, 330, 399, 453, 1402
BseGI GGATG 5 cut(s) 116, 409, 766, 1023, 1100
BseLI CCNNNNNNNGG 5 cut(s) 122, 1326, 1348, 1361, 1380
BseMI GCAATG 2 cut(s) 438, 1225
BseMII CTCAG 5 cut(s) 287, 842, 970, 1251, 1370
BseNI ACTGG 2 cut(s) 949, 990
BseXI GCAGC 7 cut(s) 190, 511, 811, 941, 1322, 1325, 1410
Bsh1285I CGRYCG 1 cut(s) 544
BshFI GGCC 3 cut(s) 115, 327, 1373
BshNI GGYRCC 1 cut(s) 1351
BsiEI CGRYCG 1 cut(s) 544
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 6 cut(s) 256, 425, 1117, 1349, 1370, 1395
BslFI GGGAC 1 cut(s) 407
BslI CCNNNNNNNGG 5 cut(s) 122, 1326, 1348, 1361, 1380
BsmFI GGGAC 1 cut(s) 407
BsnI GGCC 3 cut(s) 115, 327, 1373
BsoBI CYCGRG 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 224, 967
Bsp13I TCCGGA 1 cut(s) 1116
Bsp143I GATC 3 cut(s) 730, 792, 1083
Bsp1720I GCTNAGC 1 cut(s) 671
BspANI GGCC 3 cut(s) 115, 327, 1373
BspCNI CTCAG 5 cut(s) 286, 841, 969, 1252, 1369
BspEI TCCGGA 1 cut(s) 1116
BspLI GGNNCC 3 cut(s) 221, 328, 1353
BspPI GGATC 2 cut(s) 787, 1078
BspQI GCTCTTC 1 cut(s) 640
BspT107I GGYRCC 1 cut(s) 1351
BsrDI GCAATG 2 cut(s) 438, 1225
BsrI ACTGG 2 cut(s) 949, 990
BssECI CCNNGG 5 cut(s) 223, 330, 399, 453, 1402
BssMI GATC 3 cut(s) 730, 792, 1083
BssT1I CCWWGG 3 cut(s) 399, 453, 1402
Bst2UI CCWGG 4 cut(s) 99, 225, 630, 1239
Bst4CI ACNGT 3 cut(s) 10, 23, 396
Bst6I CTCTTC 1 cut(s) 640
BstAPI GCANNNNNTGC 1 cut(s) 926
BstC8I GCNNGC 1 cut(s) 1024
BstDEI CTNAG 7 cut(s) 273, 418, 671, 828, 956, 1260, 1356
BstENI CCTNNNNNAGG 1 cut(s) 1359
BstF5I GGATG 5 cut(s) 116, 409, 766, 1023, 1100
BstH2I RGCGCY 1 cut(s) 1412
BstHHI GCGC 1 cut(s) 1411
BstKTI GATC 3 cut(s) 733, 795, 1086
BstMBI GATC 3 cut(s) 730, 792, 1083
BstMCI CGRYCG 1 cut(s) 544
BstMWI GCNNNNNNNGC 1 cut(s) 926
BstNI CCWGG 4 cut(s) 99, 225, 630, 1239
BstNSI RCATGY 1 cut(s) 874
BstSCI CCNGG 5 cut(s) 97, 223, 423, 628, 1237
BstV1I GCAGC 7 cut(s) 190, 511, 811, 941, 1322, 1325, 1410
BstV2I GAAGAC 2 cut(s) 154, 1065
BstX2I RGATCY 2 cut(s) 730, 792
BstXI CCANNNNNNTGG 1 cut(s) 215
BstYI RGATCY 2 cut(s) 730, 792
BsuI GTATCC 1 cut(s) 1070
BsuRI GGCC 3 cut(s) 115, 327, 1373
BtsCI GGATG 5 cut(s) 116, 409, 766, 1023, 1100
BtsIMutI CAGTG 1 cut(s) 392
Cac8I GCNNGC 1 cut(s) 1024
CfoI GCGC 1 cut(s) 1411
Cfr13I GGNCC 1 cut(s) 326
CseI GACGC 1 cut(s) 1305
Csp6I GTAC 2 cut(s) 1103, 1352
CviAII CATG 2 cut(s) 462, 871
CviQI GTAC 2 cut(s) 1103, 1352
DdeI CTNAG 7 cut(s) 273, 418, 671, 828, 956, 1260, 1356
DpnI GATC 3 cut(s) 732, 794, 1085
DpnII GATC 3 cut(s) 730, 792, 1083
DriI GACNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 2 cut(s) 113, 1371
Eam1104I CTCTTC 1 cut(s) 640
Eam1105I GACNNNNNGTC 1 cut(s) 463
EarI CTCTTC 1 cut(s) 640
Eco130I CCWWGG 3 cut(s) 399, 453, 1402
Eco24I GRGCYC 2 cut(s) 224, 967
Eco47III AGCGCT 1 cut(s) 1410
Eco57I CTGAAG 1 cut(s) 1027
Eco88I CYCGRG 1 cut(s) 81
EcoNI CCTNNNNNAGG 1 cut(s) 1359
EcoRII CCWGG 4 cut(s) 97, 223, 628, 1237
EcoT14I CCWWGG 3 cut(s) 399, 453, 1402
EcoT38I GRGCYC 2 cut(s) 224, 967
ErhI CCWWGG 3 cut(s) 399, 453, 1402
FaeI CATG 2 cut(s) 465, 874
FalI AAGNNNNNCTT 2 cut(s) 638, 670
FaqI GGGAC 1 cut(s) 407
FatI CATG 2 cut(s) 461, 870
Fnu4HI GCNGC 7 cut(s) 179, 525, 825, 930, 1311, 1314, 1399
FokI GGATG 5 cut(s) 123, 416, 773, 1030, 1107
FriOI GRGCYC 2 cut(s) 224, 967
Fsp4HI GCNGC 7 cut(s) 179, 525, 825, 930, 1311, 1314, 1399
FspBI CTAG 5 cut(s) 174, 593, 893, 972, 1432
GlaI GCGC 1 cut(s) 1410
GluI GCNGC 7 cut(s) 179, 525, 825, 930, 1311, 1314, 1399
GsuI CTGGAG 1 cut(s) 81
HaeII RGCGCY 1 cut(s) 1412
HaeIII GGCC 3 cut(s) 115, 327, 1373
HapII CCGG 6 cut(s) 256, 425, 1117, 1349, 1370, 1395
HgaI GACGC 1 cut(s) 1305
HhaI GCGC 1 cut(s) 1411
Hin1II CATG 2 cut(s) 465, 874
Hin6I GCGC 1 cut(s) 1409
HinP1I GCGC 1 cut(s) 1409
HincII GTYRAC 2 cut(s) 484, 1291
HindII GTYRAC 2 cut(s) 484, 1291
HindIII AAGCTT 3 cut(s) 89, 673, 742
HinfI GANTC 5 cut(s) 271, 389, 458, 859, 1330
HpaI GTTAAC 1 cut(s) 1291
HpaII CCGG 6 cut(s) 256, 425, 1117, 1349, 1370, 1395
HphI GGTGA 3 cut(s) 280, 698, 1030
Hpy166II GTNNAC 3 cut(s) 484, 510, 1291
Hpy188I TCNGA 4 cut(s) 886, 1046, 1088, 1321
Hpy8I GTNNAC 3 cut(s) 484, 510, 1291
HpyAV CCTTC 4 cut(s) 660, 910, 1051, 1093
HpyCH4III ACNGT 3 cut(s) 10, 23, 396
HpyCH4IV ACGT 2 cut(s) 1062, 1202
HpyCH4V TGCA 4 cut(s) 136, 527, 874, 929
HpyF10VI GCNNNNNNNGC 1 cut(s) 926
HpyF3I CTNAG 7 cut(s) 273, 418, 671, 828, 956, 1260, 1356
HpySE526I ACGT 2 cut(s) 1062, 1202
Hsp92II CATG 2 cut(s) 465, 874
HspAI GCGC 1 cut(s) 1409
Kpn2I TCCGGA 1 cut(s) 1116
KpnI GGTACC 1 cut(s) 1355
KspAI GTTAAC 1 cut(s) 1291
Kzo9I GATC 3 cut(s) 730, 792, 1083
LguI GCTCTTC 1 cut(s) 640
LmnI GCTCC 2 cut(s) 219, 1406
Lsp1109I GCAGC 7 cut(s) 190, 511, 811, 941, 1322, 1325, 1410
LweI GCATC 2 cut(s) 222, 394
MaeI CTAG 5 cut(s) 174, 593, 893, 972, 1432
MaeII ACGT 2 cut(s) 1062, 1202
MaeIII GTNAC 2 cut(s) 268, 602
MalI GATC 3 cut(s) 732, 794, 1085
MboI GATC 3 cut(s) 730, 792, 1083
MboII GAAGA 7 cut(s) 154, 334, 387, 514, 529, 627, 1070
MfeI CAATTG 1 cut(s) 607
MflI RGATCY 2 cut(s) 730, 792
MhlI GDGCHC 2 cut(s) 224, 967
MlsI TGGCCA 1 cut(s) 115
MluNI TGGCCA 1 cut(s) 115
MlyI GAGTC 2 cut(s) 265, 452
MnlI CCTC 7 cut(s) 105, 241, 340, 931, 1008, 1295, 1365
Mox20I TGGCCA 1 cut(s) 115
MroI TCCGGA 1 cut(s) 1116
MroXI GAANNNNTTC 2 cut(s) 506, 900
MscI TGGCCA 1 cut(s) 115
MseI TTAA 4 cut(s) 288, 677, 779, 1290
MslI CAYNNNNRTG 1 cut(s) 351
Msp20I TGGCCA 1 cut(s) 115
MspI CCGG 6 cut(s) 256, 425, 1117, 1349, 1370, 1395
MspR9I CCNGG 5 cut(s) 99, 225, 425, 630, 1239
MunI CAATTG 1 cut(s) 607
MvaI CCWGG 4 cut(s) 99, 225, 630, 1239
MwoI GCNNNNNNNGC 1 cut(s) 926
NciI CCSGG 1 cut(s) 425
NdeII GATC 3 cut(s) 730, 792, 1083
NlaIII CATG 2 cut(s) 465, 874
NlaIV GGNNCC 3 cut(s) 221, 328, 1353
NmeAIII GCCGAG 1 cut(s) 311
NmuCI GTSAC 1 cut(s) 268
NspI RCATGY 1 cut(s) 874
PciSI GCTCTTC 1 cut(s) 640
PdmI GAANNNNTTC 2 cut(s) 506, 900
PfeI GAWTC 3 cut(s) 389, 859, 1330
PflMI CCANNNNNTGG 2 cut(s) 122, 1380
PfoI TCCNGGA 2 cut(s) 423, 1237
PkrI GCNGC 7 cut(s) 180, 526, 826, 931, 1312, 1315, 1400
PleI GAGTC 2 cut(s) 265, 452
PpsI GAGTC 2 cut(s) 265, 452
Psp6I CCWGG 4 cut(s) 97, 223, 628, 1237
PspGI CCWGG 4 cut(s) 97, 223, 628, 1237
PspN4I GGNNCC 3 cut(s) 221, 328, 1353
PspPI GGNCC 1 cut(s) 326
PsrI GAACNNNNNNTAC 2 cut(s) 542, 574
PsuI RGATCY 2 cut(s) 730, 792
RsaI GTAC 2 cut(s) 1104, 1353
RsaNI GTAC 2 cut(s) 1103, 1352
RseI CAYNNNNRTG 1 cut(s) 351
SapI GCTCTTC 1 cut(s) 640
SaqAI TTAA 4 cut(s) 288, 677, 779, 1290
SatI GCNGC 7 cut(s) 179, 525, 825, 930, 1311, 1314, 1399
Sau3AI GATC 3 cut(s) 730, 792, 1083
Sau96I GGNCC 1 cut(s) 326
SchI GAGTC 2 cut(s) 265, 452
ScrFI CCNGG 5 cut(s) 99, 225, 425, 630, 1239
SduI GDGCHC 2 cut(s) 224, 967
SfaNI GCATC 2 cut(s) 222, 394
SmiMI CAYNNNNRTG 1 cut(s) 351
SspMI CTAG 5 cut(s) 174, 593, 893, 972, 1432
StyD4I CCNGG 5 cut(s) 97, 223, 423, 628, 1237
StyI CCWWGG 3 cut(s) 399, 453, 1402
TaaI ACNGT 3 cut(s) 10, 23, 396
TaiI ACGT 2 cut(s) 1065, 1205
TaqI TCGA 1 cut(s) 723
TaqII GACCGA 2 cut(s) 530, 640
TfiI GAWTC 3 cut(s) 389, 859, 1330
Tru1I TTAA 4 cut(s) 288, 677, 779, 1290
Tru9I TTAA 4 cut(s) 288, 677, 779, 1290
TscAI CASTG 1 cut(s) 399
TseFI GTSAC 1 cut(s) 268
TseI GCWGC 7 cut(s) 178, 524, 824, 929, 1310, 1313, 1398
Tsp45I GTSAC 1 cut(s) 268
TspRI CASTG 1 cut(s) 399
Van91I CCANNNNNTGG 2 cut(s) 122, 1380
XagI CCTNNNNNAGG 1 cut(s) 1359
XapI RAATTY 2 cut(s) 195, 1376
XbaI TCTAGA 2 cut(s) 592, 892
XceI RCATGY 1 cut(s) 874
XcmI CCANNNNNNNNNTGG 1 cut(s) 451
XmnI GAANNNNTTC 2 cut(s) 506, 900
XspI CTAG 5 cut(s) 174, 593, 893, 972, 1432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.