RchiOBHm_Chr2g0111471

Domain of unknown function (DUF4220)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000662
Physical Location & Seq
Reverse (-)
23129914 .. 23131884
1971 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48506

Sequence Viewer

Length: 1971 bp
ATGGAAGATAACGCCTTGTGGCCAAGACACTTTCTTGGTCTCATATTCCAGGTTTTGGCTGTGACGTACGTCTTTATTATGCAGTCAACTCGAGAAAACAAGCTATGGTGGCCAACACTGTTGCTAATTTTCCCAGGACTTGTAAAGTATGGCGAGCGAACACGTGCTTTGTATCTTGCCAGCTTAAGCAGTCTCAAGGACTCCATACTTGCAGTACCGGACACTGGACCGGATTATGCAAAGTACATGGATGAGTACTCTTCAAGAAAAGCTGCCAATCTTCCAATTCATATACACACCGAAACAGGCCGTGGCCCAGAATCCAAGAGTGAGACTTACCCTGAGGAAGAAGCAGGCGGCGACAAAATTGATAATATTGTTGTGGTGCGGCTTGCTCATGAATTCTTTAAAATCTCCATGGGTCTTATTATAGATATTGTTCTTGATTTTCATCAGCGCAAGCAGAGCCGTGCCTATTTCGATAAGAGAACATCCGAAGCGGCTTATACATTGATTGCAACAGAGCTCAACTTTATGTATGAAGCTCTTTACACCAAAGCTTATGTGGTGCATTATGTGTGGGGATACGTTTTAAGGGCTATATCATTTGGAACGGTTTGTATAGCCCTTGGTTTCTTCTATAAGTTGGACAAGCATGGCTTCCACAGGTTTGATGTTAGAAATACCTATTCCTTGCTCTTGGGTGCAATAGCCCTAGATTCAATAGCTATTTCGATGCTTATCTTGTCTGATTGGACTGTTGTAATTAGCAAGTGTCGCCCAAATTCTTGTTTAGCCACTAATCTCATGAACAAGCACCTCAATTTGAAGAGATCTTTATGGTCTACCACTGAAATACCAACGAAGTGTTTAGAGGGGACCAGGAAGATTTTATTTCAAAGATGGTCTGAATCTGTCTCTGCATTCAGCTTTATAGATTATTCTCTCCACGAATATGGAAGAGCACCACCTACAGTTATGGACTATGCAGGCTTTTTGGGCATTAAAATAATCAGATTCATGGGTCTCAAGGATATTCGAGATGAGATCAAATATAGAACCAGCAAGAAACTCTCTGGGGAACTGTGGAAGTTCATTTTTGAAGAGTTGAAAAGTAAATCGGAGGATGCAGTTGATCCTCAAAATGGCAGCAAAATATGTTCAGCAAGAGGGGAGTGGATTCTTAAGGAGTACTACTATGGGGATGGCGGGCCACTGTTTAACAATTTAAGATCGCGAATTTATCTTGCAGGGGAGTGGATTCTTAAGGAGTACTACTATGTTACTTATGACCGAAGCATTCTGTTGTGGCACATTGCAACCGAGTTGCGCTATCACGATGAGAAGCCTCAGAATAGCAATGCTGGTGATCATAAGAATAGCAATGCTGGTGGTGATGATGGTGATCATCGAGAGTTTAGTAAGACATTGTCTGATTATATGTTATATCTCTTAGTTATGCAGCCTGATTTGATGTCTTCTGTAGCGGGAATTGGTCAGAAAAGATTTTCTGATACTTTTGCAGAAGCCAAACAATTCTTTGAAAAAAGGGCACTGGGATCGGATGAAACACTGGAAAATGCTTGCAGAAAACTCCTCGAAGTAAATACAGAAATTAAACCTGTTGATGTCAAAGGGAATAGAAGCAAGTCTGTATTGTTTGATGCATGTATTCTGGCAAGGGAGCTGAAGAATTTGAGATGGAAATTCATAAGTGAAGTGTGGGTGGAATTACTATCATATGCTGCAAGTCATTGCAGACCAAGTAGCCATGCCCAATTGCTGAGTAAAGGTGGAGAGCTTGTCACTTTTGTTTGGTTATTAATGGCTCATTTTGGCATAGCAGAGCAGTTCCAAGTGCAAGAGGACCAAGCAAGAGTAAAACTGACAGTTGGAAAGCCAGCGGATGAAGTCTTTTATTGGTCTGGTGAAAAGCCACCCGAGTCAAAAGCCACCGGGTCAATTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4220 DUF594

Protein Analysis

656

Amino Acids

75.16

Weight (kDa)

7.61

Isoelectric Point (pI)

40.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 1 - 314 2.7e-64 Domain of unknown function (DUF4220)
DUF594 PF04578 565 - 614 2e-23 Protein of unknown function, DUF594
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 55
AccI GTMKAC 1 cut(s) 845
AccII CGCG 1 cut(s) 1237
AciI CCGC 6 cut(s) 357, 388, 500, 1209, 1487, 1904
AclWI GGATC 2 cut(s) 1130, 1567
AcoI YGGCCR 2 cut(s) 20, 110
AcsI RAATTY 5 cut(s) 401, 784, 1239, 1693, 1706
AcuI CTGAAG 1 cut(s) 1709
AcvI CACGTG 1 cut(s) 164
AfaI GTAC 6 cut(s) 68, 216, 245, 257, 1193, 1274
AfiI CCNNNNNNNGG 3 cut(s) 55, 224, 1145
AflII CTTAAG 3 cut(s) 184, 1184, 1265
AflIII ACRYGT 1 cut(s) 161
AgsI TTSAA 8 cut(s) 264, 723, 829, 899, 1103, 1111, 1544, 1967
AjnI CCWGG 3 cut(s) 48, 133, 881
Alw21I GWGCWC 2 cut(s) 528, 967
Alw26I GTCTC 5 cut(s) 44, 197, 326, 922, 1031
AlwI GGATC 2 cut(s) 1130, 1567
Ama87I CYCGRG 2 cut(s) 90, 1940
AoxI GGCC 5 cut(s) 20, 110, 307, 313, 1211
ApeKI GCWGC 4 cut(s) 272, 1149, 1462, 1745
ApoI RAATTY 5 cut(s) 401, 784, 1239, 1693, 1706
AseI ATTAAT 1 cut(s) 1823
AspLEI GCGC 2 cut(s) 459, 1332
AspS9I GGNCC 5 cut(s) 227, 314, 879, 1211, 1867
AsuC2I CCSGG 1 cut(s) 1957
AsuHPI GGTGA 4 cut(s) 1379, 1406, 1415, 1940
AvaI CYCGRG 2 cut(s) 90, 1940
AvaII GGWCC 3 cut(s) 227, 879, 1867
AxyI CCTNAGG 1 cut(s) 342
BaeGI GKGCMC 1 cut(s) 1555
BalI TGGCCA 2 cut(s) 22, 112
BanII GRGCYC 1 cut(s) 528
BbrPI CACGTG 1 cut(s) 164
BbsI GAAGAC 1 cut(s) 1470
Bbv12I GWGCWC 2 cut(s) 528, 967
BbvI GCAGC 4 cut(s) 259, 1161, 1474, 1732
BccI CCATC 4 cut(s) 897, 1199, 1394, 1695
BceAI ACGGC 2 cut(s) 294, 453
BcgI CGANNNNNNTGC 4 cut(s) 71, 105, 1542, 1576
BciT130I CCWGG 3 cut(s) 50, 135, 883
BciVI GTATCC 1 cut(s) 578
BclI TGATCA 2 cut(s) 1369, 1405
BcnI CCSGG 1 cut(s) 1957
BcoDI GTCTC 5 cut(s) 44, 197, 326, 922, 1031
BfaI CTAG 1 cut(s) 716
BfmI CTRYAG 2 cut(s) 972, 1482
BfrI CTTAAG 3 cut(s) 184, 1184, 1265
BfuI GTATCC 1 cut(s) 578
BglII AGATCT 1 cut(s) 833
BisI GCNGC 7 cut(s) 273, 358, 389, 501, 1150, 1463, 1746
BlsI GCNGC 7 cut(s) 274, 359, 390, 502, 1151, 1464, 1747
BmcAI AGTACT 3 cut(s) 257, 1193, 1274
Bme1390I CCNGG 4 cut(s) 50, 135, 883, 1957
Bme18I GGWCC 3 cut(s) 227, 879, 1867
BmeT110I CYCGRG 2 cut(s) 90, 1940
BmgT120I GGNCC 5 cut(s) 227, 314, 879, 1211, 1867
BmiI GGNNCC 1 cut(s) 880
BmrFI CCNGG 4 cut(s) 50, 135, 883, 1957
BmrI ACTGGG 1 cut(s) 1565
BmsI GCATC 3 cut(s) 726, 1117, 1654
BmuI ACTGGG 1 cut(s) 1565
BoxI GACNNNNGTC 1 cut(s) 68
BpiI GAAGAC 1 cut(s) 1470
BpuEI CTTGAG 2 cut(s) 179, 1013
BpuMI CCSGG 1 cut(s) 1957
BsaAI YACGTR 1 cut(s) 164
BsaBI GATNNNNATC 3 cut(s) 450, 740, 1404
BsaI GGTCTC 2 cut(s) 44, 1031
BsaJI CCNNGG 4 cut(s) 133, 310, 417, 628
BsaWI WCCGGW 2 cut(s) 217, 229
BsaXI ACNNNNNCTCC 2 cut(s) 1788, 1818
Bsc4I CCNNNNNNNGG 3 cut(s) 55, 224, 1145
Bse1I ACTGG 3 cut(s) 229, 1560, 1578
Bse21I CCTNAGG 1 cut(s) 342
Bse3DI GCAATG 4 cut(s) 1314, 1366, 1390, 1753
Bse8I GATNNNNATC 3 cut(s) 450, 740, 1404
BseBI CCWGG 3 cut(s) 50, 135, 883
BseDI CCNNGG 4 cut(s) 133, 310, 417, 628
BseGI GGATG 6 cut(s) 256, 491, 1132, 1210, 1570, 1912
BseJI GATNNNNATC 3 cut(s) 450, 740, 1404
BseLI CCNNNNNNNGG 3 cut(s) 55, 224, 1145
BseMI GCAATG 4 cut(s) 1314, 1366, 1390, 1753
BseMII CTCAG 3 cut(s) 333, 1364, 1775
BseNI ACTGG 3 cut(s) 229, 1560, 1578
BseRI GAGGAG 1 cut(s) 1586
BseSI GKGCMC 1 cut(s) 1555
BseXI GCAGC 4 cut(s) 259, 1161, 1474, 1732
Bsh1236I CGCG 1 cut(s) 1237
BshFI GGCC 5 cut(s) 22, 112, 309, 315, 1213
BsiHKAI GWGCWC 2 cut(s) 528, 967
BsiHKCI CYCGRG 2 cut(s) 90, 1940
BsiSI CCGG 3 cut(s) 218, 230, 1956
BsiWI CGTACG 1 cut(s) 66
BslFI GGGAC 1 cut(s) 892
BslI CCNNNNNNNGG 3 cut(s) 55, 224, 1145
BsmAI GTCTC 5 cut(s) 44, 197, 326, 922, 1031
BsmFI GGGAC 1 cut(s) 892
BsmI GAATGC 2 cut(s) 923, 1299
BsnI GGCC 5 cut(s) 22, 112, 309, 315, 1213
Bso31I GGTCTC 2 cut(s) 44, 1031
BsoBI CYCGRG 2 cut(s) 90, 1940
Bsp1286I GDGCHC 3 cut(s) 528, 967, 1555
Bsp143I GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
Bsp19I CCATGG 1 cut(s) 417
Bsp68I TCGCGA 1 cut(s) 1237
BspACI CCGC 6 cut(s) 357, 388, 500, 1209, 1487, 1904
BspANI GGCC 5 cut(s) 22, 112, 309, 315, 1213
BspCNI CTCAG 3 cut(s) 334, 1363, 1776
BspFNI CGCG 1 cut(s) 1237
BspHI TCATGA 2 cut(s) 397, 807
BspLI GGNNCC 1 cut(s) 880
BspPI GGATC 2 cut(s) 1130, 1567
BspQI GCTCTTC 1 cut(s) 955
BspTI CTTAAG 3 cut(s) 184, 1184, 1265
BspTNI GGTCTC 2 cut(s) 44, 1031
BsrDI GCAATG 4 cut(s) 1314, 1366, 1390, 1753
BsrI ACTGG 3 cut(s) 229, 1560, 1578
BssECI CCNNGG 4 cut(s) 133, 310, 417, 628
BssMI GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
BssT1I CCWWGG 2 cut(s) 417, 628
Bst2UI CCWGG 3 cut(s) 50, 135, 883
Bst4CI ACNGT 7 cut(s) 120, 616, 760, 976, 1086, 1218, 1891
Bst6I CTCTTC 4 cut(s) 265, 824, 955, 1098
BstAFI CTTAAG 3 cut(s) 184, 1184, 1265
BstBAI YACGTR 1 cut(s) 164
BstC8I GCNNGC 9 cut(s) 155, 181, 355, 393, 461, 991, 1211, 1585, 1902
BstDEI CTNAG 4 cut(s) 342, 1350, 1453, 1784
BstDSI CCRYGG 2 cut(s) 310, 417
BstF5I GGATG 6 cut(s) 256, 491, 1132, 1210, 1570, 1912
BstFNI CGCG 1 cut(s) 1237
BstHHI GCGC 2 cut(s) 459, 1332
BstKTI GATC 7 cut(s) 836, 1050, 1138, 1235, 1372, 1408, 1562
BstMAI GTCTC 5 cut(s) 44, 197, 326, 922, 1031
BstMBI GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
BstMWI GCNNNNNNNGC 4 cut(s) 109, 465, 777, 999
BstNI CCWGG 3 cut(s) 50, 135, 883
BstNSI RCATGY 1 cut(s) 1671
BstPAI GACNNNNGTC 1 cut(s) 68
BstSCI CCNGG 4 cut(s) 48, 133, 881, 1955
BstSFI CTRYAG 2 cut(s) 972, 1482
BstSLI GKGCMC 1 cut(s) 1555
BstUI CGCG 1 cut(s) 1237
BstV1I GCAGC 4 cut(s) 259, 1161, 1474, 1732
BstV2I GAAGAC 1 cut(s) 1470
BstX2I RGATCY 1 cut(s) 833
BstXI CCANNNNNNTGG 1 cut(s) 956
BstYI RGATCY 1 cut(s) 833
Bsu36I CCTNAGG 1 cut(s) 342
BsuI GTATCC 1 cut(s) 578
BsuRI GGCC 5 cut(s) 22, 112, 309, 315, 1213
BtgI CCRYGG 2 cut(s) 310, 417
BtsCI GGATG 6 cut(s) 256, 491, 1132, 1210, 1570, 1912
BtsIMutI CAGTG 6 cut(s) 116, 222, 849, 1214, 1553, 1571
BtuMI TCGCGA 1 cut(s) 1237
Cac8I GCNNGC 9 cut(s) 155, 181, 355, 393, 461, 991, 1211, 1585, 1902
CciI TCATGA 2 cut(s) 397, 807
CfoI GCGC 2 cut(s) 459, 1332
Cfr13I GGNCC 5 cut(s) 227, 314, 879, 1211, 1867
Csp6I GTAC 6 cut(s) 67, 215, 244, 256, 1192, 1273
CspCI CAANNNNNGTGG 2 cut(s) 1372, 1407
CviAII CATG 8 cut(s) 247, 398, 418, 656, 808, 1021, 1668, 1772
CviQI GTAC 6 cut(s) 67, 215, 244, 256, 1192, 1273
DdeI CTNAG 4 cut(s) 342, 1350, 1453, 1784
DpnI GATC 7 cut(s) 835, 1049, 1137, 1234, 1371, 1407, 1561
DpnII GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
DraI TTTAAA 1 cut(s) 409
EaeI YGGCCR 2 cut(s) 20, 110
Eam1104I CTCTTC 4 cut(s) 265, 824, 955, 1098
EarI CTCTTC 4 cut(s) 265, 824, 955, 1098
Ecl136II GAGCTC 1 cut(s) 526
Eco130I CCWWGG 2 cut(s) 417, 628
Eco24I GRGCYC 1 cut(s) 528
Eco31I GGTCTC 2 cut(s) 44, 1031
Eco47I GGWCC 3 cut(s) 227, 879, 1867
Eco53kI GAGCTC 1 cut(s) 526
Eco57I CTGAAG 1 cut(s) 1709
Eco72I CACGTG 1 cut(s) 164
Eco81I CCTNAGG 1 cut(s) 342
Eco88I CYCGRG 2 cut(s) 90, 1940
EcoICRI GAGCTC 1 cut(s) 526
EcoRI GAATTC 1 cut(s) 401
EcoRII CCWGG 3 cut(s) 48, 133, 881
EcoT14I CCWWGG 2 cut(s) 417, 628
EcoT22I ATGCAT 1 cut(s) 1669
EcoT38I GRGCYC 1 cut(s) 528
ErhI CCWWGG 2 cut(s) 417, 628
FaeI CATG 8 cut(s) 250, 401, 421, 659, 811, 1024, 1671, 1775
FalI AAGNNNNNCTT 2 cut(s) 644, 676
FaqI GGGAC 1 cut(s) 892
FatI CATG 8 cut(s) 246, 397, 417, 655, 807, 1020, 1667, 1771
FauI CCCGC 2 cut(s) 1202, 1480
FauNDI CATATG 1 cut(s) 1741
FbaI TGATCA 2 cut(s) 1369, 1405
FblI GTMKAC 1 cut(s) 845
Fnu4HI GCNGC 7 cut(s) 273, 358, 389, 501, 1150, 1463, 1746
FokI GGATG 6 cut(s) 263, 478, 1139, 1217, 1577, 1919
FriOI GRGCYC 1 cut(s) 528
Fsp4HI GCNGC 7 cut(s) 273, 358, 389, 501, 1150, 1463, 1746
FspBI CTAG 1 cut(s) 716
GlaI GCGC 2 cut(s) 458, 1331
GluI GCNGC 7 cut(s) 273, 358, 389, 501, 1150, 1463, 1746
HaeIII GGCC 5 cut(s) 22, 112, 309, 315, 1213
HapII CCGG 3 cut(s) 218, 230, 1956
HhaI GCGC 2 cut(s) 459, 1332
Hin1II CATG 8 cut(s) 250, 401, 421, 659, 811, 1024, 1671, 1775
Hin6I GCGC 2 cut(s) 457, 1330
HinP1I GCGC 2 cut(s) 457, 1330
HincII GTYRAC 1 cut(s) 87
HindII GTYRAC 1 cut(s) 87
HindIII AAGCTT 1 cut(s) 558
HinfI GANTC 8 cut(s) 200, 320, 719, 911, 1017, 1180, 1261, 1943
HpaII CCGG 3 cut(s) 218, 230, 1956
HphI GGTGA 4 cut(s) 1379, 1406, 1415, 1940
Hpy166II GTNNAC 2 cut(s) 87, 846
Hpy188III TCNNGA 9 cut(s) 92, 264, 398, 443, 808, 1040, 1236, 1337, 1412
Hpy8I GTNNAC 2 cut(s) 87, 846
HpyCH4III ACNGT 7 cut(s) 120, 616, 760, 976, 1086, 1218, 1891
HpyCH4IV ACGT 4 cut(s) 65, 69, 163, 588
HpyF10VI GCNNNNNNNGC 4 cut(s) 109, 465, 777, 999
HpyF3I CTNAG 4 cut(s) 342, 1350, 1453, 1784
HpySE526I ACGT 4 cut(s) 65, 69, 163, 588
Hsp92II CATG 8 cut(s) 250, 401, 421, 659, 811, 1024, 1671, 1775
HspAI GCGC 2 cut(s) 457, 1330
Ksp22I TGATCA 2 cut(s) 1369, 1405
Kzo9I GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
LguI GCTCTTC 1 cut(s) 955
LmnI GCTCC 1 cut(s) 1684
Lsp1109I GCAGC 4 cut(s) 259, 1161, 1474, 1732
LweI GCATC 3 cut(s) 726, 1117, 1654
MaeI CTAG 1 cut(s) 716
MaeII ACGT 4 cut(s) 65, 69, 163, 588
MaeIII GTNAC 3 cut(s) 61, 1282, 1804
MalI GATC 7 cut(s) 835, 1049, 1137, 1234, 1371, 1407, 1561
MboI GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
MfeI CAATTG 1 cut(s) 1778
MflI RGATCY 1 cut(s) 833
MhlI GDGCHC 3 cut(s) 528, 967, 1555
MlsI TGGCCA 2 cut(s) 22, 112
MluNI TGGCCA 2 cut(s) 22, 112
MlyI GAGTC 2 cut(s) 194, 1952
MmeI TCCRAC 2 cut(s) 627, 1873
MnlI CCTC 9 cut(s) 337, 830, 868, 1117, 1149, 1163, 1359, 1607, 1858
Mox20I TGGCCA 2 cut(s) 22, 112
Mph1103I ATGCAT 1 cut(s) 1669
MscI TGGCCA 2 cut(s) 22, 112
MslI CAYNNNNRTG 1 cut(s) 954
Msp20I TGGCCA 2 cut(s) 22, 112
MspA1I CMGCKG 1 cut(s) 1904
MspCI CTTAAG 3 cut(s) 184, 1184, 1265
MspI CCGG 3 cut(s) 218, 230, 1956
MspR9I CCNGG 4 cut(s) 50, 135, 883, 1957
MunI CAATTG 1 cut(s) 1778
Mva1269I GAATGC 2 cut(s) 923, 1299
MvaI CCWGG 3 cut(s) 50, 135, 883
MvnI CGCG 1 cut(s) 1237
MwoI GCNNNNNNNGC 4 cut(s) 109, 465, 777, 999
NciI CCSGG 1 cut(s) 1957
NcoI CCATGG 1 cut(s) 417
NdeI CATATG 1 cut(s) 1741
NdeII GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
NlaIII CATG 8 cut(s) 250, 401, 421, 659, 811, 1024, 1671, 1775
NlaIV GGNNCC 1 cut(s) 880
NmuCI GTSAC 2 cut(s) 61, 1804
NruI TCGCGA 1 cut(s) 1237
NsiI ATGCAT 1 cut(s) 1669
NspI RCATGY 1 cut(s) 1671
PaeR7I CTCGAG 1 cut(s) 90
PagI TCATGA 2 cut(s) 397, 807
PciSI GCTCTTC 1 cut(s) 955
PctI GAATGC 2 cut(s) 923, 1299
PfeI GAWTC 6 cut(s) 320, 719, 911, 1017, 1180, 1261
Pfl23II CGTACG 1 cut(s) 66
PflFI GACNNNGTC 1 cut(s) 1429
PflMI CCANNNNNTGG 1 cut(s) 55
PkrI GCNGC 7 cut(s) 274, 359, 390, 502, 1151, 1464, 1747
PleI GAGTC 2 cut(s) 194, 1951
PmaCI CACGTG 1 cut(s) 164
PmlI CACGTG 1 cut(s) 164
PpsI GAGTC 2 cut(s) 194, 1951
Ppu21I YACGTR 1 cut(s) 164
PshAI GACNNNNGTC 1 cut(s) 68
PshBI ATTAAT 1 cut(s) 1823
Psp124BI GAGCTC 1 cut(s) 528
Psp6I CCWGG 3 cut(s) 48, 133, 881
PspCI CACGTG 1 cut(s) 164
PspGI CCWGG 3 cut(s) 48, 133, 881
PspLI CGTACG 1 cut(s) 66
PspN4I GGNNCC 1 cut(s) 880
PspPI GGNCC 5 cut(s) 227, 314, 879, 1211, 1867
PsuI RGATCY 1 cut(s) 833
PsyI GACNNNGTC 1 cut(s) 1429
RruI TCGCGA 1 cut(s) 1237
RsaI GTAC 6 cut(s) 68, 216, 245, 257, 1193, 1274
RsaNI GTAC 6 cut(s) 67, 215, 244, 256, 1192, 1273
RseI CAYNNNNRTG 1 cut(s) 954
SacI GAGCTC 1 cut(s) 528
SapI GCTCTTC 1 cut(s) 955
SatI GCNGC 7 cut(s) 273, 358, 389, 501, 1150, 1463, 1746
Sau3AI GATC 7 cut(s) 833, 1047, 1135, 1232, 1369, 1405, 1559
Sau96I GGNCC 5 cut(s) 227, 314, 879, 1211, 1867
ScaI AGTACT 3 cut(s) 257, 1193, 1274
SchI GAGTC 2 cut(s) 194, 1952
ScrFI CCNGG 4 cut(s) 50, 135, 883, 1957
SduI GDGCHC 3 cut(s) 528, 967, 1555
SfaNI GCATC 3 cut(s) 726, 1117, 1654
SfcI CTRYAG 2 cut(s) 972, 1482
Sfr274I CTCGAG 1 cut(s) 90
SinI GGWCC 3 cut(s) 227, 879, 1867
SlaI CTCGAG 1 cut(s) 90
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 6 cut(s) 90, 184, 194, 1028, 1184, 1265
SmoI CTYRAG 6 cut(s) 90, 184, 194, 1028, 1184, 1265
SsiI CCGC 6 cut(s) 357, 388, 500, 1209, 1487, 1904
SspI AATATT 1 cut(s) 376
SspMI CTAG 1 cut(s) 716
SstI GAGCTC 1 cut(s) 528
StyD4I CCNGG 4 cut(s) 48, 133, 881, 1955
StyI CCWWGG 2 cut(s) 417, 628
TaaI ACNGT 7 cut(s) 120, 616, 760, 976, 1086, 1218, 1891
TaiI ACGT 4 cut(s) 68, 72, 166, 591
TaqI TCGA 6 cut(s) 91, 480, 734, 1039, 1411, 1599
TaqII GACCGA 1 cut(s) 1308
TatI WGTACW 4 cut(s) 243, 255, 1191, 1272
TauI GCSGC 3 cut(s) 360, 391, 503
TfiI GAWTC 6 cut(s) 320, 719, 911, 1017, 1180, 1261
TscAI CASTG 6 cut(s) 123, 229, 856, 1221, 1560, 1578
TseFI GTSAC 2 cut(s) 61, 1804
TseI GCWGC 4 cut(s) 272, 1149, 1462, 1745
Tsp45I GTSAC 2 cut(s) 61, 1804
TspRI CASTG 6 cut(s) 123, 229, 856, 1221, 1560, 1578
Tth111I GACNNNGTC 1 cut(s) 1429
Van91I CCANNNNNTGG 1 cut(s) 55
Vha464I CTTAAG 3 cut(s) 184, 1184, 1265
VpaK11BI GGWCC 3 cut(s) 227, 879, 1867
VspI ATTAAT 1 cut(s) 1823
XapI RAATTY 5 cut(s) 401, 784, 1239, 1693, 1706
XceI RCATGY 1 cut(s) 1671
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XhoI CTCGAG 1 cut(s) 90
XmiI GTMKAC 1 cut(s) 845
XspI CTAG 1 cut(s) 716
ZrmI AGTACT 3 cut(s) 257, 1193, 1274
Zsp2I ATGCAT 1 cut(s) 1669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.