Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000662

Physical Location & Seq

Genomic Coordinates Reverse (-)

23757271 .. 23759538

Gene Structure 2268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G018420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGCTTCATCAGCGGCTCCTATTTCTGACAGCCTCAAGAAGATCTGGGATAAGTGGAATCTCCGGAGCTTCATCATGTTAAGTCTCACATTGCAGACCTTCTTGATTCTCTTCGCACCCTTGAGAAAGCGATCATCGAGCAAATGGGTAATCGTGCCCATCTGGCTGGCTTACTTGCTCGCTGACTGGGCTGCTAACTTCGCTATCGGACTAATTGCAAGCAGCCAAACGAACATTGATCAAGGTTCGCCAGAGAACGGTAATCTATTGGCATTCTGGGCTCCCTTTCTTCTTTTGCACCTTGGTGGTCCAGACACCATAATTGCAATTGCTATGGAAGACAATGCGTTGTGGCCAAGGCACTTGCTTGGTCTCATATTCCAGGTTGTAGCTGCAATGTACGTCTTTGGTATGCAGTTCTCTAACCAAAACAAGCTACTGTGGCCAACACTCTTCCTGTTTGTACCAGGACTCGTCAAGTACGGCGAGCGAACACGTGCGTTATATCTTGCCAGCTTGGAAAGTCTCAAGGAAACCATACTTGCAGTACCGGAACCTGGACCAGATTATGCAAAGTACATGGATGAGTACTCCTCAAGAAAAGTTGCCCATCTTCCAATTAAAATAGAAATCAAAGAAGGTCGTAGCTCAGATTCGAAGAACGTGACGTATCGGCTGGGAGAAGGAGACGTCGTCATTGATAATATTACACTAGTGGAGGGTGCTCATCACTTGTTTCAAATTTCCATGGGTCTTATTATAGATCTTGTGTTCGACTATCATCAGCGCAAAGAGAGCCGTGCCTATTTCATCAAATTAGAATCAGGAGATGCTTTTACATCAATTGCTACTGAGCTCAATTTTATGTATGAAGCTCTGTACACCAAAGTTTATGTGGTACATTCTCGACGGGGATACTTGTTGAGAGCCGCATCCTTCATCGCCGTTTGCATAGCCTTTGTTTTCTTCTATAGATTAGAGAAACATGGCTTTCACAGCTTTGATGTTGGAATTACTTATTCCTTGCTTTTTGGTGCCATAGCTCTTGATTCAGTAGCTCTTTCGATGCTGATATTATCTGATTGGACGATCGCTGTTGTATACAAGTACTGTAAAAAGTGTCGTGTAGTCACTGATCTCATGATGAAGTACCTGGAGTTTAAGAGATCATGGCGACCAACTACTCCACCAAAGTGTCTGGAGCGGACCAGAAAGATTTTATTTCGGAGATGGTGTGAATCTGTCTCCGGTTTCAGCTTCATAGATTATTCTCTCCGAGAATGTGGAAGATCAGTAGTCCGACCTGCAATTTTGGACCAAATTGGCATTTACCGAAGGATCATCAGATTTTTGGGCTACCTTTACCATAGAATCATCATATTCCTAGGCCACCTTTACCTCAGAATCATTAAATTCTTTGGCCTCAAGTATCTTCGAGATGAGATGAAGTACAGATCCAGCAAGAGACTGGAAGAGAATTTGTGGAAATTCATTTTTGATGAGTTGAAAAGTAAATCCTCAGAAGTTGTTGATGATCCCAAAATTGGTAGAGAAATATGTTCATCCCAAGGGGATTGGGTTCTCCTAAAAAAGTACGAGAACCATCCGGAGTACAAGAACTTGCTAGCATGCTTTGTTGATGTTACTTATGACCGACGCGTTCTGATGTGGCATATTGCTACTGAGATGTGCTATTACAGAGTTGACACAGGCAATGGCGGTGAGCATGGTGAATATAGTAAGACGTTGTCTGATTATTTGCTATATCTCTTAATTATGCAACCTGCTTTGATGTCATCTGTAGCGGGAATTGGACAAAAGAGATTTAGAGATACGGTTGCAGAAGCCAAAAAATTCTTCAAAAAAGGGCGATTGGGATCCGATGTGAAACTAGGCGAGGGAAAACTAGGCGAGGCTTGCTACAAACTCCTTGATGTAGATACAGGAGTTAAACCTGTCAATGTCAAAGGGAATAGAAGTAAATCTGTTTTGTTTGATGCATGTATTCTGGCCAAGCAGCTGATGAAATTCGAAGACTCGAAATGGGAATTAATAAGCTCAGTGTGGGTGGAATTGCTATCATATGCTGCAAGTCATTGCAGAGCACAAAGCCACGCACAATTGCTGACTAAAGGTGGAGAGCTTGTCACTTTTGTTTGGTTACTGATGGCTCGCTTTGGCATTGAGGAGGACATCCAAGTACTGGAGGTCCAAGCAAGAGTAAAACTGATCATGGAAAAGCAACCTGATGTATTCAAGAGTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4220 DUF594

Protein Analysis

755

Amino Acids

86.75

Weight (kDa)

9.14

Isoelectric Point (pI)

38.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4220	PF13968	55 - 423	9.6e-91	Domain of unknown function (DUF4220)
DUF594	PF04578	678 - 728	7.6e-22	Protein of unknown function, DUF594

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000662)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19080 AT4G19090 AT5G45460 AT5G45470 AT5G45480 AT5G45530 AT5G45540
fragaria_vesca	FvH4_3g03690 FvH4_3g03690
malus_domestica	MD05G1327200.v1.1 MD17G1136800.v1.1 MD17G1216700.v1.1
prunus_persica	Prupe.4G034100_v2.0.a1
pyrus_communis	pycom05g16250 pycom05g30160 pycom17g13040
rosa_chinensis	RchiOBHm_Chr2g0111471 RchiOBHm_Chr2g0112841 RchiOBHm_Chr2g0112871 RchiOBHm_Chr2g0151851 RchiOBHm_Chr5g0005741
rosa_laevigata	RLG00000017895 RLG00000018015 RLG00000018017 RLG00000020583 RLG00000031322
rosa_multiflora	Rmu_sc0000570.1_g000032 Rmu_sc0002351.1_g000021 Rmu_sc0002351.1_g000026 Rmu_sc0002351.1_g000069 Rmu_sc0004286.1_g000001 Rmu_sc0004286.1_g000007 Rmu_sc0005791.1_g000006 Rmu_sc0024477.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070110 Rroxscaffold_2G00096140 Rroxscaffold_2G00131100 Rroxscaffold_2G00131110 Rroxscaffold_2G00132290 Rroxscaffold_6G00399620
rosa_rugosa	Rorug02G0174600 Rorug02G0182900 Rorug02G0183000 Rorug02G0183100 Rorug02G0429200 Rorug04G0417700
rosa_samantha	Rh2AG227300 Rh2AG237700 Rh2AG238000 Rh2AG490000 Rh2BG239100 Rh2BG250500 Rh2BG250700 Rh2BG251300 Rh2BG502500 Rh2CG230900 Rh2CG241500 Rh2CG242000 Rh2CG476300 Rh2DG235100 Rh2DG245200 Rh2DG245500 Rh2DG513700 Rh5AG045300 Rh5BG044000 Rh5CG052800 Rh5DG043800 Rh6CG067200 Rh6DG064100
rosa_wichuraiana	Rw0G018030 Rw2G017560 Rw2G018420 Rw2G018610 Rw2G040170 Rw2G040290 Rw5G004550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	693
Acc36I	ACCTGC	2 cut(s)	1312, 1792
AccB1I	GGYRCC	1 cut(s)	1034
AccB7I	CCANNNNNTGG	1 cut(s)	2203
AccBSI	CCGCTC	1 cut(s)	1204
AccI	GTMKAC	1 cut(s)	1101
AccII	CGCG	1 cut(s)	1659
AccIII	TCCGGA	2 cut(s)	63, 1606
AciI	CCGC	5 cut(s)	14, 930, 1204, 1719, 1805
AclWI	GGATC	5 cut(s)	1346, 1449, 1529, 1872, 1885
AcoI	YGGCCR	3 cut(s)	353, 443, 2010
AcsI	RAATTY	6 cut(s)	741, 1412, 1477, 1487, 1853, 2027
AcvI	CACGTG	1 cut(s)	497
AcyI	GRCGYC	1 cut(s)	690
AfiI	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2203
AflIII	ACRYGT	2 cut(s)	494, 1657
AgsI	TTSAA	4 cut(s)	740, 1507, 1861, 2257
AhlI	ACTAGT	1 cut(s)	712
AjnI	CCWGG	4 cut(s)	381, 466, 556, 1152
AjuI	GAANNNNNNNTTGG	2 cut(s)	1841, 1873
AleI	CACNNNNGTG	2 cut(s)	303, 1192
Alw21I	GWGCWC	3 cut(s)	727, 858, 2107
Alw26I	GTCTC	6 cut(s)	89, 377, 530, 681, 1249, 1459
AlwI	GGATC	5 cut(s)	1346, 1449, 1529, 1872, 1885
Aor13HI	TCCGGA	2 cut(s)	63, 1606
AoxI	GGCC	5 cut(s)	353, 443, 1387, 1420, 2010
ApeKI	GCWGC	5 cut(s)	191, 222, 392, 2017, 2087
ApoI	RAATTY	6 cut(s)	741, 1412, 1477, 1487, 1853, 2027
AseI	ATTAAT	1 cut(s)	2051
AspA2I	CCTAGG	1 cut(s)	1384
AspLEI	GCGC	1 cut(s)	789
AspS9I	GGNCC	5 cut(s)	308, 560, 1206, 1315, 2209
AsuHPI	GGTGA	2 cut(s)	1733, 1742
AsuII	TTCGAA	2 cut(s)	656, 2031
AsuNHI	GCTAGC	1 cut(s)	1624
AvaII	GGWCC	5 cut(s)	308, 560, 1206, 1315, 2209
AvrII	CCTAGG	1 cut(s)	1384
BaeGI	GKGCMC	1 cut(s)	159
BaeI	ACNNNNGTAYC	2 cut(s)	1932, 1965
BalI	TGGCCA	3 cut(s)	355, 445, 2012
BamHI	GGATCC	1 cut(s)	1877
BanI	GGYRCC	1 cut(s)	1034
BanII	GRGCYC	2 cut(s)	283, 858
BbrPI	CACGTG	1 cut(s)	497
BbsI	GAAGAC	2 cut(s)	345, 2040
Bbv12I	GWGCWC	3 cut(s)	727, 858, 2107
BbvI	GCAGC	5 cut(s)	178, 234, 379, 2029, 2074
BccI	CCATC	5 cut(s)	167, 618, 1224, 1611, 2161
BceAI	ACGGC	3 cut(s)	499, 783, 929
BciT130I	CCWGG	4 cut(s)	383, 468, 558, 1154
BciVI	GTATCC	1 cut(s)	908
BclI	TGATCA	2 cut(s)	238, 2229
BcoDI	GTCTC	6 cut(s)	89, 377, 530, 681, 1249, 1459
BcuI	ACTAGT	1 cut(s)	712
BfaI	CTAG	5 cut(s)	713, 1385, 1625, 1892, 1907
BfmI	CTRYAG	2 cut(s)	970, 1800
BfuAI	ACCTGC	2 cut(s)	1312, 1792
BfuI	GTATCC	1 cut(s)	908
BglI	GCCNNNNNGGC	1 cut(s)	163
BglII	AGATCT	2 cut(s)	42, 763
BisI	GCNGC	7 cut(s)	15, 192, 223, 393, 930, 2018, 2088
BlnI	CCTAGG	1 cut(s)	1384
BlsI	GCNGC	7 cut(s)	16, 193, 224, 394, 931, 2019, 2089
BmcAI	AGTACT	3 cut(s)	590, 1109, 2202
Bme1390I	CCNGG	4 cut(s)	383, 468, 558, 1154
Bme18I	GGWCC	5 cut(s)	308, 560, 1206, 1315, 2209
BmgT120I	GGNCC	5 cut(s)	308, 560, 1206, 1315, 2209
BmiI	GGNNCC	5 cut(s)	18, 282, 555, 1036, 1879
BmrFI	CCNGG	4 cut(s)	383, 468, 558, 1154
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	4 cut(s)	820, 941, 1056, 1987
BmtI	GCTAGC	1 cut(s)	1628
BmuI	ACTGGG	1 cut(s)	196
BpiI	GAAGAC	2 cut(s)	345, 2040
BplI	GAGNNNNNCTC	2 cut(s)	578, 610
BpmI	CTGGAG	3 cut(s)	1175, 1220, 2225
Bpu14I	TTCGAA	2 cut(s)	656, 2031
BpuEI	CTTGAG	5 cut(s)	20, 142, 512, 580, 1409
BsaAI	YACGTR	1 cut(s)	497
BsaBI	GATNNNNATC	1 cut(s)	1876
BsaHI	GRCGYC	1 cut(s)	690
BsaI	GGTCTC	1 cut(s)	377
BsaJI	CCNNGG	5 cut(s)	301, 356, 747, 1384, 1567
BsaWI	WCCGGW	4 cut(s)	63, 550, 1247, 1606
BsaXI	ACNNNNNCTCC	6 cut(s)	678, 708, 1219, 1249, 2130, 2160
Bsc4I	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2203
Bse1I	ACTGG	3 cut(s)	191, 1473, 2208
Bse3DI	GCAATG	4 cut(s)	89, 402, 1720, 2095
Bse8I	GATNNNNATC	1 cut(s)	1876
BseAI	TCCGGA	2 cut(s)	63, 1606
BseBI	CCWGG	4 cut(s)	383, 468, 558, 1154
BseDI	CCNNGG	5 cut(s)	301, 356, 747, 1384, 1567
BseGI	GGATG	5 cut(s)	589, 932, 1562, 1603, 2193
BseJI	GATNNNNATC	1 cut(s)	1876
BseLI	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2203
BseMI	GCAATG	4 cut(s)	89, 402, 1720, 2095
BseMII	CTCAG	6 cut(s)	663, 843, 1414, 1533, 1674, 2073
BseNI	ACTGG	3 cut(s)	191, 1473, 2208
BseRI	GAGGAG	2 cut(s)	583, 2201
BseSI	GKGCMC	1 cut(s)	159
BseXI	GCAGC	5 cut(s)	178, 234, 379, 2029, 2074
BseYI	CCCAGC	1 cut(s)	676
Bsh1236I	CGCG	1 cut(s)	1659
Bsh1285I	CGRYCG	1 cut(s)	1092
BshFI	GGCC	5 cut(s)	355, 445, 1389, 1422, 2012
BshNI	GGYRCC	1 cut(s)	1034
BsiEI	CGRYCG	1 cut(s)	1092
BsiHKAI	GWGCWC	3 cut(s)	727, 858, 2107
BsiSI	CCGG	4 cut(s)	64, 551, 1248, 1607
BslI	CCNNNNNNNGG	4 cut(s)	257, 557, 1544, 2203
BsmAI	GTCTC	6 cut(s)	89, 377, 530, 681, 1249, 1459
BsmBI	CGTCTC	1 cut(s)	681
BsmI	GAATGC	1 cut(s)	272
BsnI	GGCC	5 cut(s)	355, 445, 1389, 1422, 2012
Bso31I	GGTCTC	1 cut(s)	377
Bsp119I	TTCGAA	2 cut(s)	656, 2031
Bsp1286I	GDGCHC	5 cut(s)	159, 283, 727, 858, 2107
Bsp13I	TCCGGA	2 cut(s)	63, 1606
Bsp1407I	TGTACA	1 cut(s)	879
Bsp19I	CCATGG	1 cut(s)	747
BspACI	CCGC	5 cut(s)	14, 930, 1204, 1719, 1805
BspANI	GGCC	5 cut(s)	355, 445, 1389, 1422, 2012
BspCNI	CTCAG	6 cut(s)	662, 844, 1413, 1532, 1675, 2072
BspEI	TCCGGA	2 cut(s)	63, 1606
BspFNI	CGCG	1 cut(s)	1659
BspHI	TCATGA	1 cut(s)	1140
BspLI	GGNNCC	5 cut(s)	18, 282, 555, 1036, 1879
BspMI	ACCTGC	2 cut(s)	1312, 1792
BspOI	GCTAGC	1 cut(s)	1628
BspPI	GGATC	5 cut(s)	1346, 1449, 1529, 1872, 1885
BspT104I	TTCGAA	2 cut(s)	656, 2031
BspT107I	GGYRCC	1 cut(s)	1034
BspTNI	GGTCTC	1 cut(s)	377
BsrBI	CCGCTC	1 cut(s)	1204
BsrDI	GCAATG	4 cut(s)	89, 402, 1720, 2095
BsrGI	TGTACA	1 cut(s)	879
BsrI	ACTGG	3 cut(s)	191, 1473, 2208
BssECI	CCNNGG	5 cut(s)	301, 356, 747, 1384, 1567
BssNAI	GTATAC	1 cut(s)	1102
BssNI	GRCGYC	1 cut(s)	690
BssT1I	CCWWGG	5 cut(s)	301, 356, 747, 1384, 1567
Bst1107I	GTATAC	1 cut(s)	1102
Bst2UI	CCWGG	4 cut(s)	383, 468, 558, 1154
Bst4CI	ACNGT	4 cut(s)	260, 441, 1112, 1837
Bst6I	CTCTTC	3 cut(s)	116, 458, 1467
BstACI	GRCGYC	1 cut(s)	690
BstAUI	TGTACA	1 cut(s)	879
BstBAI	YACGTR	1 cut(s)	497
BstBI	TTCGAA	2 cut(s)	656, 2031
BstC8I	GCNNGC	9 cut(s)	168, 180, 220, 488, 514, 1626, 1630, 1918, 2173
BstDEI	CTNAG	6 cut(s)	649, 852, 1400, 1519, 1683, 2059
BstDSI	CCRYGG	1 cut(s)	747
BstF5I	GGATG	5 cut(s)	589, 932, 1562, 1603, 2193
BstFNI	CGCG	1 cut(s)	1659
BstHHI	GCGC	1 cut(s)	789
BstMAI	GTCTC	6 cut(s)	89, 377, 530, 681, 1249, 1459
BstMCI	CGRYCG	1 cut(s)	1092
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 163, 188, 200, 278, 442, 795, 996, 1917
BstNI	CCWGG	4 cut(s)	383, 468, 558, 1154
BstNSI	RCATGY	2 cut(s)	1632, 2004
BstSCI	CCNGG	4 cut(s)	381, 466, 556, 1152
BstSFI	CTRYAG	2 cut(s)	970, 1800
BstSLI	GKGCMC	1 cut(s)	159
BstUI	CGCG	1 cut(s)	1659
BstV1I	GCAGC	5 cut(s)	178, 234, 379, 2029, 2074
BstV2I	GAAGAC	2 cut(s)	345, 2040
BstX2I	RGATCY	4 cut(s)	42, 763, 1454, 1877
BstXI	CCANNNNNNTGG	1 cut(s)	166
BstYI	RGATCY	4 cut(s)	42, 763, 1454, 1877
BstZ17I	GTATAC	1 cut(s)	1102
BsuI	GTATCC	1 cut(s)	908
BsuRI	GGCC	5 cut(s)	355, 445, 1389, 1422, 2012
BtgI	CCRYGG	1 cut(s)	747
BtgZI	GCGATG	1 cut(s)	925
BtsCI	GGATG	5 cut(s)	589, 932, 1562, 1603, 2193
BtsIMutI	CAGTG	2 cut(s)	1131, 2067
BveI	ACCTGC	2 cut(s)	1312, 1792
Cac8I	GCNNGC	9 cut(s)	168, 180, 220, 488, 514, 1626, 1630, 1918, 2173
CciI	TCATGA	1 cut(s)	1140
CfoI	GCGC	1 cut(s)	789
Cfr13I	GGNCC	5 cut(s)	308, 560, 1206, 1315, 2209
CseI	GACGC	1 cut(s)	1665
DdeI	CTNAG	6 cut(s)	649, 852, 1400, 1519, 1683, 2059
EaeI	YGGCCR	3 cut(s)	353, 443, 2010
Eam1104I	CTCTTC	3 cut(s)	116, 458, 1467
EarI	CTCTTC	3 cut(s)	116, 458, 1467
Ecl136II	GAGCTC	1 cut(s)	856
Eco130I	CCWWGG	5 cut(s)	301, 356, 747, 1384, 1567
Eco24I	GRGCYC	2 cut(s)	283, 858
Eco31I	GGTCTC	1 cut(s)	377
Eco47I	GGWCC	5 cut(s)	308, 560, 1206, 1315, 2209
Eco53kI	GAGCTC	1 cut(s)	856
Eco72I	CACGTG	1 cut(s)	497
EcoICRI	GAGCTC	1 cut(s)	856
EcoRII	CCWGG	4 cut(s)	381, 466, 556, 1152
EcoT14I	CCWWGG	5 cut(s)	301, 356, 747, 1384, 1567
EcoT22I	ATGCAT	1 cut(s)	2002
EcoT38I	GRGCYC	2 cut(s)	283, 858
ErhI	CCWWGG	5 cut(s)	301, 356, 747, 1384, 1567
Esp3I	CGTCTC	1 cut(s)	681
FauI	CCCGC	1 cut(s)	1798
FauNDI	CATATG	1 cut(s)	2083
FbaI	TGATCA	2 cut(s)	238, 2229
FblI	GTMKAC	1 cut(s)	1101
Fnu4HI	GCNGC	7 cut(s)	15, 192, 223, 393, 930, 2018, 2088
FokI	GGATG	5 cut(s)	596, 919, 1549, 1590, 2180
FriOI	GRGCYC	2 cut(s)	283, 858
Fsp4HI	GCNGC	7 cut(s)	15, 192, 223, 393, 930, 2018, 2088
FspBI	CTAG	5 cut(s)	713, 1385, 1625, 1892, 1907
GlaI	GCGC	1 cut(s)	788
GluI	GCNGC	7 cut(s)	15, 192, 223, 393, 930, 2018, 2088
GsaI	CCCAGC	1 cut(s)	680
GsuI	CTGGAG	3 cut(s)	1175, 1220, 2225
HaeIII	GGCC	5 cut(s)	355, 445, 1389, 1422, 2012
HapII	CCGG	4 cut(s)	64, 551, 1248, 1607
HgaI	GACGC	1 cut(s)	1665
HhaI	GCGC	1 cut(s)	789
Hin1I	GRCGYC	1 cut(s)	690
Hin6I	GCGC	1 cut(s)	787
HinP1I	GCGC	1 cut(s)	787
HincII	GTYRAC	1 cut(s)	1705
HindII	GTYRAC	1 cut(s)	1705
HpaII	CCGG	4 cut(s)	64, 551, 1248, 1607
HphI	GGTGA	2 cut(s)	1733, 1742
Hpy166II	GTNNAC	3 cut(s)	882, 1102, 1705
Hpy8I	GTNNAC	3 cut(s)	882, 1102, 1705
Hpy99I	CGWCG	3 cut(s)	695, 912, 1659
HpyAV	CCTTC	5 cut(s)	109, 632, 677, 946, 1329
HpyCH4III	ACNGT	4 cut(s)	260, 441, 1112, 1837
HpyCH4IV	ACGT	6 cut(s)	402, 496, 663, 668, 690, 1745
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 163, 188, 200, 278, 442, 795, 996, 1917
HpyF3I	CTNAG	6 cut(s)	649, 852, 1400, 1519, 1683, 2059
HpySE526I	ACGT	6 cut(s)	402, 496, 663, 668, 690, 1745
Hsp92I	GRCGYC	1 cut(s)	690
HspAI	GCGC	1 cut(s)	787
Kpn2I	TCCGGA	2 cut(s)	63, 1606
Ksp22I	TGATCA	2 cut(s)	238, 2229
LmnI	GCTCC	4 cut(s)	22, 66, 286, 1201
Lsp1109I	GCAGC	5 cut(s)	178, 234, 379, 2029, 2074
LweI	GCATC	4 cut(s)	820, 941, 1056, 1987
MaeI	CTAG	5 cut(s)	713, 1385, 1625, 1892, 1907
MaeII	ACGT	6 cut(s)	402, 496, 663, 668, 690, 1745
MaeIII	GTNAC	5 cut(s)	664, 1129, 1642, 2146, 2160
MbiI	CCGCTC	1 cut(s)	1204
MfeI	CAATTG	3 cut(s)	327, 843, 2120
MflI	RGATCY	4 cut(s)	42, 763, 1454, 1877
MhlI	GDGCHC	5 cut(s)	159, 283, 727, 858, 2107
MlsI	TGGCCA	3 cut(s)	355, 445, 2012
MluI	ACGCGT	1 cut(s)	1657
MluNI	TGGCCA	3 cut(s)	355, 445, 2012
MlyI	GAGTC	2 cut(s)	465, 2030
MmeI	TCCRAC	2 cut(s)	988, 1324
Mox20I	TGGCCA	3 cut(s)	355, 445, 2012
Mph1103I	ATGCAT	1 cut(s)	2002
MroI	TCCGGA	2 cut(s)	63, 1606
MscI	TGGCCA	3 cut(s)	355, 445, 2012
MseI	TTAA	7 cut(s)	80, 621, 1161, 1410, 1772, 1950, 2051
MslI	CAYNNNNRTG	2 cut(s)	303, 1192
Msp20I	TGGCCA	3 cut(s)	355, 445, 2012
MspA1I	CMGCKG	2 cut(s)	14, 2020
MspI	CCGG	4 cut(s)	64, 551, 1248, 1607
MspR9I	CCNGG	4 cut(s)	383, 468, 558, 1154
MunI	CAATTG	3 cut(s)	327, 843, 2120
Mva1269I	GAATGC	1 cut(s)	272
MvaI	CCWGG	4 cut(s)	383, 468, 558, 1154
MvnI	CGCG	1 cut(s)	1659
MwoI	GCNNNNNNNGC	9 cut(s)	11, 163, 188, 200, 278, 442, 795, 996, 1917
NcoI	CCATGG	1 cut(s)	747
NdeI	CATATG	1 cut(s)	2083
NheI	GCTAGC	1 cut(s)	1624
NlaIV	GGNNCC	5 cut(s)	18, 282, 555, 1036, 1879
NmuCI	GTSAC	3 cut(s)	664, 1129, 2146
NsiI	ATGCAT	1 cut(s)	2002
NspI	RCATGY	2 cut(s)	1632, 2004
NspV	TTCGAA	2 cut(s)	656, 2031
OliI	CACNNNNGTG	2 cut(s)	303, 1192
PaeI	GCATGC	1 cut(s)	1632
PagI	TCATGA	1 cut(s)	1140
PctI	GAATGC	1 cut(s)	272
PfeI	GAWTC	8 cut(s)	58, 106, 653, 821, 1049, 1238, 1371, 1404
PflFI	GACNNNGTC	2 cut(s)	692, 1747
PflMI	CCANNNNNTGG	1 cut(s)	2203
PkrI	GCNGC	7 cut(s)	16, 193, 224, 394, 931, 2019, 2089
Ple19I	CGATCG	1 cut(s)	1092
PleI	GAGTC	2 cut(s)	465, 2030
PmaCI	CACGTG	1 cut(s)	497
PmlI	CACGTG	1 cut(s)	497
PpsI	GAGTC	2 cut(s)	465, 2030
Ppu21I	YACGTR	1 cut(s)	497
PshBI	ATTAAT	1 cut(s)	2051
Psp124BI	GAGCTC	1 cut(s)	858
Psp6I	CCWGG	4 cut(s)	381, 466, 556, 1152
PspCI	CACGTG	1 cut(s)	497
PspFI	CCCAGC	1 cut(s)	676
PspGI	CCWGG	4 cut(s)	381, 466, 556, 1152
PspN4I	GGNNCC	5 cut(s)	18, 282, 555, 1036, 1879
PspPI	GGNCC	5 cut(s)	308, 560, 1206, 1315, 2209
PsuI	RGATCY	4 cut(s)	42, 763, 1454, 1877
PsyI	GACNNNGTC	2 cut(s)	692, 1747
PvuI	CGATCG	1 cut(s)	1092
PvuII	CAGCTG	1 cut(s)	2020
RseI	CAYNNNNRTG	2 cut(s)	303, 1192
SacI	GAGCTC	1 cut(s)	858
SaqAI	TTAA	7 cut(s)	80, 621, 1161, 1410, 1772, 1950, 2051
SatI	GCNGC	7 cut(s)	15, 192, 223, 393, 930, 2018, 2088
Sau96I	GGNCC	5 cut(s)	308, 560, 1206, 1315, 2209
ScaI	AGTACT	3 cut(s)	590, 1109, 2202
SchI	GAGTC	2 cut(s)	465, 2030
ScrFI	CCNGG	4 cut(s)	383, 468, 558, 1154
SduI	GDGCHC	5 cut(s)	159, 283, 727, 858, 2107
SfaNI	GCATC	4 cut(s)	820, 941, 1056, 1987
SfcI	CTRYAG	2 cut(s)	970, 1800
SfuI	TTCGAA	2 cut(s)	656, 2031
SinI	GGWCC	5 cut(s)	308, 560, 1206, 1315, 2209
SmiMI	CAYNNNNRTG	2 cut(s)	303, 1192
SmlI	CTYRAG	5 cut(s)	35, 121, 527, 595, 1424
SmoI	CTYRAG	5 cut(s)	35, 121, 527, 595, 1424
SpeI	ACTAGT	1 cut(s)	712
SphI	GCATGC	1 cut(s)	1632
SsiI	CCGC	5 cut(s)	14, 930, 1204, 1719, 1805
SspI	AATATT	1 cut(s)	706
SspMI	CTAG	5 cut(s)	713, 1385, 1625, 1892, 1907
SstI	GAGCTC	1 cut(s)	858
StyD4I	CCNGG	4 cut(s)	381, 466, 556, 1152
StyI	CCWWGG	5 cut(s)	301, 356, 747, 1384, 1567
TaaI	ACNGT	4 cut(s)	260, 441, 1112, 1837
TaiI	ACGT	6 cut(s)	405, 499, 666, 671, 693, 1748
TaqI	TCGA	8 cut(s)	137, 656, 774, 907, 1064, 1435, 2031, 2039
TaqII	GACCGA	1 cut(s)	1668
TatI	WGTACW	7 cut(s)	576, 588, 879, 1107, 1449, 1611, 2200
TauI	GCSGC	2 cut(s)	17, 932
TfiI	GAWTC	8 cut(s)	58, 106, 653, 821, 1049, 1238, 1371, 1404
Tru1I	TTAA	7 cut(s)	80, 621, 1161, 1410, 1772, 1950, 2051
Tru9I	TTAA	7 cut(s)	80, 621, 1161, 1410, 1772, 1950, 2051
TscAI	CASTG	2 cut(s)	1138, 2067
TseFI	GTSAC	3 cut(s)	664, 1129, 2146
TseI	GCWGC	5 cut(s)	191, 222, 392, 2017, 2087
Tsp45I	GTSAC	3 cut(s)	664, 1129, 2146
TspRI	CASTG	2 cut(s)	1138, 2067
Tth111I	GACNNNGTC	2 cut(s)	692, 1747
Van91I	CCANNNNNTGG	1 cut(s)	2203
VpaK11BI	GGWCC	5 cut(s)	308, 560, 1206, 1315, 2209
VspI	ATTAAT	1 cut(s)	2051
XapI	RAATTY	6 cut(s)	741, 1412, 1477, 1487, 1853, 2027
XceI	RCATGY	2 cut(s)	1632, 2004
XcmI	CCANNNNNNNNNTGG	2 cut(s)	892, 1465
XmaJI	CCTAGG	1 cut(s)	1384
XmiI	GTMKAC	1 cut(s)	1101
XspI	CTAG	5 cut(s)	713, 1385, 1625, 1892, 1907
ZraI	GACGTC	1 cut(s)	691
ZrmI	AGTACT	3 cut(s)	590, 1109, 2202
Zsp2I	ATGCAT	1 cut(s)	2002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.