Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1142 |
| AarI | CACCTGC | 1 cut(s) | 335 |
| AatII | GACGTC | 1 cut(s) | 2226 |
| Acc36I | ACCTGC | 2 cut(s) | 335, 631 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1872 |
| AccI | GTMKAC | 2 cut(s) | 927, 2202 |
| AccII | CGCG | 2 cut(s) | 2154, 2273 |
| AciI | CCGC | 2 cut(s) | 2231, 2238 |
| AclWI | GGATC | 6 cut(s) | 283, 440, 1217, 1985, 2078, 2091 |
| AcoI | YGGCCR | 3 cut(s) | 266, 620, 1914 |
| AcsI | RAATTY | 4 cut(s) | 9, 1316, 1718, 2105 |
| AcuI | CTGAAG | 2 cut(s) | 1311, 2112 |
| AcyI | GRCGYC | 2 cut(s) | 1952, 2223 |
| AfaI | GTAC | 2 cut(s) | 427, 1817 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 224, 298, 1872 |
| AflIII | ACRYGT | 1 cut(s) | 1594 |
| AhlI | ACTAGT | 1 cut(s) | 2042 |
| AjnI | CCWGG | 1 cut(s) | 433 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1185, 1217 |
| AleI | CACNNNNGTG | 1 cut(s) | 852 |
| Alw21I | GWGCWC | 4 cut(s) | 326, 394, 1594, 2042 |
| Alw26I | GTCTC | 1 cut(s) | 2214 |
| Alw44I | GTGCAC | 3 cut(s) | 322, 1590, 2038 |
| AlwI | GGATC | 6 cut(s) | 283, 440, 1217, 1985, 2078, 2091 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1331, 1361 |
| AoxI | GGCC | 7 cut(s) | 266, 620, 1008, 1735, 1914, 2028, 2266 |
| ApaLI | GTGCAC | 3 cut(s) | 322, 1590, 2038 |
| ApeKI | GCWGC | 6 cut(s) | 707, 1091, 1171, 1178, 1325, 1488 |
| ApoI | RAATTY | 4 cut(s) | 9, 1316, 1718, 2105 |
| AspLEI | GCGC | 2 cut(s) | 2154, 2275 |
| AspS9I | GGNCC | 5 cut(s) | 107, 1008, 1259, 1534, 2029 |
| AsuHPI | GGTGA | 7 cut(s) | 449, 721, 866, 1591, 1673, 1988, 2177 |
| AvaII | GGWCC | 3 cut(s) | 107, 1259, 1534 |
| BaeGI | GKGCMC | 3 cut(s) | 326, 1594, 2042 |
| BalI | TGGCCA | 2 cut(s) | 622, 1916 |
| BamHI | GGATCC | 1 cut(s) | 2083 |
| BbsI | GAAGAC | 2 cut(s) | 1671, 2103 |
| Bbv12I | GWGCWC | 4 cut(s) | 326, 394, 1594, 2042 |
| BbvI | GCAGC | 6 cut(s) | 694, 1103, 1158, 1165, 1337, 1500 |
| BccI | CCATC | 8 cut(s) | 49, 998, 1055, 1143, 1204, 1727, 2156, 2252 |
| BceAI | ACGGC | 1 cut(s) | 253 |
| BciT130I | CCWGG | 1 cut(s) | 435 |
| BcoDI | GTCTC | 1 cut(s) | 2214 |
| BcuI | ACTAGT | 1 cut(s) | 2042 |
| BfaI | CTAG | 7 cut(s) | 195, 279, 470, 633, 717, 2033, 2043 |
| BfmI | CTRYAG | 1 cut(s) | 708 |
| BfuAI | ACCTGC | 2 cut(s) | 335, 631 |
| BglII | AGATCT | 2 cut(s) | 310, 900 |
| BisI | GCNGC | 7 cut(s) | 708, 1092, 1172, 1179, 1326, 1489, 2239 |
| BlsI | GCNGC | 7 cut(s) | 709, 1093, 1173, 1180, 1327, 1490, 2240 |
| BmcAI | AGTACT | 1 cut(s) | 1817 |
| Bme1390I | CCNGG | 1 cut(s) | 435 |
| Bme18I | GGWCC | 3 cut(s) | 107, 1259, 1534 |
| BmgT120I | GGNCC | 5 cut(s) | 107, 1008, 1259, 1534, 2029 |
| BmiI | GGNNCC | 3 cut(s) | 1009, 1536, 2085 |
| BmrFI | CCNGG | 1 cut(s) | 435 |
| BmsI | GCATC | 3 cut(s) | 86, 784, 2012 |
| BpiI | GAAGAC | 2 cut(s) | 1671, 2103 |
| BpmI | CTGGAG | 2 cut(s) | 335, 504 |
| BpuEI | CTTGAG | 1 cut(s) | 2150 |
| Bsa29I | ATCGAT | 1 cut(s) | 749 |
| BsaBI | GATNNNNATC | 1 cut(s) | 725 |
| BsaHI | GRCGYC | 2 cut(s) | 1952, 2223 |
| BsaJI | CCNNGG | 3 cut(s) | 648, 1848, 1917 |
| BsaWI | WCCGGW | 1 cut(s) | 613 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 224, 298, 1872 |
| Bse1I | ACTGG | 4 cut(s) | 27, 806, 1813, 1898 |
| Bse3DI | GCAATG | 3 cut(s) | 1391, 1575, 1888 |
| Bse8I | GATNNNNATC | 1 cut(s) | 725 |
| BseBI | CCWGG | 1 cut(s) | 435 |
| BseCI | ATCGAT | 1 cut(s) | 749 |
| BseDI | CCNNGG | 3 cut(s) | 648, 1848, 1917 |
| BseGI | GGATG | 7 cut(s) | 77, 307, 556, 799, 1215, 1738, 2167 |
| BseJI | GATNNNNATC | 1 cut(s) | 725 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 224, 298, 1872 |
| BseMI | GCAATG | 3 cut(s) | 1391, 1575, 1888 |
| BseMII | CTCAG | 4 cut(s) | 1331, 1392, 1674, 2238 |
| BseNI | ACTGG | 4 cut(s) | 27, 806, 1813, 1898 |
| BseRI | GAGGAG | 2 cut(s) | 2183, 2186 |
| BseSI | GKGCMC | 3 cut(s) | 326, 1594, 2042 |
| BseXI | GCAGC | 6 cut(s) | 694, 1103, 1158, 1165, 1337, 1500 |
| Bsh1236I | CGCG | 2 cut(s) | 2154, 2273 |
| BshFI | GGCC | 7 cut(s) | 268, 622, 1010, 1737, 1916, 2030, 2268 |
| BshVI | ATCGAT | 1 cut(s) | 749 |
| BsiHKAI | GWGCWC | 4 cut(s) | 326, 394, 1594, 2042 |
| BsiSI | CCGG | 1 cut(s) | 614 |
| BslFI | GGGAC | 2 cut(s) | 388, 2157 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 224, 298, 1872 |
| BsmAI | GTCTC | 1 cut(s) | 2214 |
| BsmBI | CGTCTC | 1 cut(s) | 2214 |
| BsmFI | GGGAC | 2 cut(s) | 388, 2157 |
| BsmI | GAATGC | 1 cut(s) | 1291 |
| BsnI | GGCC | 7 cut(s) | 268, 622, 1010, 1737, 1916, 2030, 2268 |
| Bsp1286I | GDGCHC | 4 cut(s) | 326, 394, 1594, 2042 |
| Bsp143I | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| BspACI | CCGC | 2 cut(s) | 2231, 2238 |
| BspANI | GGCC | 7 cut(s) | 268, 622, 1010, 1737, 1916, 2030, 2268 |
| BspCNI | CTCAG | 4 cut(s) | 1332, 1393, 1675, 2239 |
| BspDI | ATCGAT | 1 cut(s) | 749 |
| BspFNI | CGCG | 2 cut(s) | 2154, 2273 |
| BspHI | TCATGA | 3 cut(s) | 673, 1515, 1632 |
| BspLI | GGNNCC | 3 cut(s) | 1009, 1536, 2085 |
| BspMAI | CTGCAG | 1 cut(s) | 712 |
| BspMI | ACCTGC | 2 cut(s) | 335, 631 |
| BspPI | GGATC | 6 cut(s) | 283, 440, 1217, 1985, 2078, 2091 |
| BsrDI | GCAATG | 3 cut(s) | 1391, 1575, 1888 |
| BsrI | ACTGG | 4 cut(s) | 27, 806, 1813, 1898 |
| BssECI | CCNNGG | 3 cut(s) | 648, 1848, 1917 |
| BssMI | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| BssNI | GRCGYC | 2 cut(s) | 1952, 2223 |
| BssT1I | CCWWGG | 3 cut(s) | 648, 1848, 1917 |
| Bst2UI | CCWGG | 1 cut(s) | 435 |
| Bst4CI | ACNGT | 6 cut(s) | 58, 456, 516, 925, 1333, 1948 |
| Bst6I | CTCTTC | 3 cut(s) | 962, 1436, 1619 |
| BstACI | GRCGYC | 2 cut(s) | 1952, 2223 |
| BstC8I | GCNNGC | 3 cut(s) | 1033, 1176, 1914 |
| BstDEI | CTNAG | 6 cut(s) | 1340, 1401, 1467, 1683, 2054, 2247 |
| BstF5I | GGATG | 7 cut(s) | 77, 307, 556, 799, 1215, 1738, 2167 |
| BstFNI | CGCG | 2 cut(s) | 2154, 2273 |
| BstHHI | GCGC | 2 cut(s) | 2154, 2275 |
| BstKTI | GATC | 8 cut(s) | 291, 313, 448, 729, 903, 1225, 1993, 2086 |
| BstMAI | GTCTC | 1 cut(s) | 2214 |
| BstMBI | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1565, 1909 |
| BstNI | CCWGG | 1 cut(s) | 435 |
| BstNSI | RCATGY | 2 cut(s) | 572, 1598 |
| BstSCI | CCNGG | 1 cut(s) | 433 |
| BstSFI | CTRYAG | 1 cut(s) | 708 |
| BstSLI | GKGCMC | 3 cut(s) | 326, 1594, 2042 |
| BstUI | CGCG | 2 cut(s) | 2154, 2273 |
| BstV1I | GCAGC | 6 cut(s) | 694, 1103, 1158, 1165, 1337, 1500 |
| BstV2I | GAAGAC | 2 cut(s) | 1671, 2103 |
| BstX2I | RGATCY | 5 cut(s) | 288, 310, 900, 1222, 2083 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2156 |
| BstYI | RGATCY | 5 cut(s) | 288, 310, 900, 1222, 2083 |
| Bsu15I | ATCGAT | 1 cut(s) | 749 |
| BsuRI | GGCC | 7 cut(s) | 268, 622, 1010, 1737, 1916, 2030, 2268 |
| BsuTUI | ATCGAT | 1 cut(s) | 749 |
| BtgZI | GCGATG | 1 cut(s) | 1141 |
| BtsCI | GGATG | 7 cut(s) | 77, 307, 556, 799, 1215, 1738, 2167 |
| BtsI | GCAGTG | 3 cut(s) | 899, 960, 1559 |
| BtsIMutI | CAGTG | 8 cut(s) | 899, 921, 960, 1362, 1425, 1559, 1905, 1953 |
| BveI | ACCTGC | 2 cut(s) | 335, 631 |
| Cac8I | GCNNGC | 3 cut(s) | 1033, 1176, 1914 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1331, 1361 |
| CciI | TCATGA | 3 cut(s) | 673, 1515, 1632 |
| CfoI | GCGC | 2 cut(s) | 2154, 2275 |
| Cfr13I | GGNCC | 5 cut(s) | 107, 1008, 1259, 1534, 2029 |
| ClaI | ATCGAT | 1 cut(s) | 749 |
| CseI | GACGC | 1 cut(s) | 1941 |
| CsiI | ACCWGGT | 1 cut(s) | 433 |
| Csp6I | GTAC | 2 cut(s) | 426, 1816 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 319, 354, 599, 634, 2004, 2039 |
| CviQI | GTAC | 2 cut(s) | 426, 1816 |
| DdeI | CTNAG | 6 cut(s) | 1340, 1401, 1467, 1683, 2054, 2247 |
| DpnI | GATC | 8 cut(s) | 290, 312, 447, 728, 902, 1224, 1992, 2085 |
| DpnII | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| EaeI | YGGCCR | 3 cut(s) | 266, 620, 1914 |
| Eam1104I | CTCTTC | 3 cut(s) | 962, 1436, 1619 |
| EarI | CTCTTC | 3 cut(s) | 962, 1436, 1619 |
| EciI | GGCGGA | 1 cut(s) | 2246 |
| Eco130I | CCWWGG | 3 cut(s) | 648, 1848, 1917 |
| Eco47I | GGWCC | 3 cut(s) | 107, 1259, 1534 |
| Eco57I | CTGAAG | 2 cut(s) | 1311, 2112 |
| EcoO109I | RGGNCCY | 3 cut(s) | 107, 1008, 2029 |
| EcoRII | CCWGG | 1 cut(s) | 433 |
| EcoT14I | CCWWGG | 3 cut(s) | 648, 1848, 1917 |
| EcoT22I | ATGCAT | 1 cut(s) | 1796 |
| ErhI | CCWWGG | 3 cut(s) | 648, 1848, 1917 |
| Esp3I | CGTCTC | 1 cut(s) | 2214 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1015, 1047 |
| FaqI | GGGAC | 2 cut(s) | 388, 2157 |
| FblI | GTMKAC | 2 cut(s) | 927, 2202 |
| Fnu4HI | GCNGC | 7 cut(s) | 708, 1092, 1172, 1179, 1326, 1489, 2239 |
| FokI | GGATG | 7 cut(s) | 64, 314, 563, 806, 1222, 1745, 2174 |
| Fsp4HI | GCNGC | 7 cut(s) | 708, 1092, 1172, 1179, 1326, 1489, 2239 |
| FspBI | CTAG | 7 cut(s) | 195, 279, 470, 633, 717, 2033, 2043 |
| GlaI | GCGC | 2 cut(s) | 2153, 2274 |
| GluI | GCNGC | 7 cut(s) | 708, 1092, 1172, 1179, 1326, 1489, 2239 |
| GsuI | CTGGAG | 2 cut(s) | 335, 504 |
| HaeIII | GGCC | 7 cut(s) | 268, 622, 1010, 1737, 1916, 2030, 2268 |
| HapII | CCGG | 1 cut(s) | 614 |
| HgaI | GACGC | 1 cut(s) | 1941 |
| HhaI | GCGC | 2 cut(s) | 2154, 2275 |
| Hin1I | GRCGYC | 2 cut(s) | 1952, 2223 |
| Hin6I | GCGC | 2 cut(s) | 2152, 2273 |
| HinP1I | GCGC | 2 cut(s) | 2152, 2273 |
| HincII | GTYRAC | 2 cut(s) | 928, 1810 |
| HindII | GTYRAC | 2 cut(s) | 928, 1810 |
| HindIII | AAGCTT | 3 cut(s) | 1275, 1293, 2071 |
| HinfI | GANTC | 6 cut(s) | 167, 191, 819, 1421, 1454, 1629 |
| HpaII | CCGG | 1 cut(s) | 614 |
| HphI | GGTGA | 7 cut(s) | 449, 721, 866, 1591, 1673, 1988, 2177 |
| Hpy166II | GTNNAC | 6 cut(s) | 324, 928, 1592, 1810, 2040, 2203 |
| Hpy188I | TCNGA | 9 cut(s) | 24, 139, 172, 301, 345, 1825, 1957, 2219, 2279 |
| Hpy188III | TCNNGA | 8 cut(s) | 200, 314, 483, 674, 1247, 1516, 1633, 1695 |
| Hpy8I | GTNNAC | 6 cut(s) | 324, 928, 1592, 1810, 2040, 2203 |
| HpyCH4III | ACNGT | 6 cut(s) | 58, 456, 516, 925, 1333, 1948 |
| HpyCH4IV | ACGT | 1 cut(s) | 2223 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1565, 1909 |
| HpyF3I | CTNAG | 6 cut(s) | 1340, 1401, 1467, 1683, 2054, 2247 |
| HpySE526I | ACGT | 1 cut(s) | 2223 |
| Hsp92I | GRCGYC | 2 cut(s) | 1952, 2223 |
| HspAI | GCGC | 2 cut(s) | 2152, 2273 |
| Kzo9I | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| LmnI | GCTCC | 2 cut(s) | 877, 2280 |
| Lsp1109I | GCAGC | 6 cut(s) | 694, 1103, 1158, 1165, 1337, 1500 |
| LweI | GCATC | 3 cut(s) | 86, 784, 2012 |
| MabI | ACCWGGT | 1 cut(s) | 433 |
| MaeI | CTAG | 7 cut(s) | 195, 279, 470, 633, 717, 2033, 2043 |
| MaeII | ACGT | 1 cut(s) | 2223 |
| MaeIII | GTNAC | 4 cut(s) | 411, 845, 1357, 1418 |
| MalI | GATC | 8 cut(s) | 290, 312, 447, 728, 902, 1224, 1992, 2085 |
| MboI | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| MflI | RGATCY | 5 cut(s) | 288, 310, 900, 1222, 2083 |
| MhlI | GDGCHC | 4 cut(s) | 326, 394, 1594, 2042 |
| MlsI | TGGCCA | 2 cut(s) | 622, 1916 |
| MluNI | TGGCCA | 2 cut(s) | 622, 1916 |
| MlyI | GAGTC | 1 cut(s) | 1415 |
| MmeI | TCCRAC | 4 cut(s) | 1056, 1237, 2111, 2164 |
| Mox20I | TGGCCA | 2 cut(s) | 622, 1916 |
| Mph1103I | ATGCAT | 1 cut(s) | 1796 |
| MscI | TGGCCA | 2 cut(s) | 622, 1916 |
| MslI | CAYNNNNRTG | 2 cut(s) | 852, 1514 |
| Msp20I | TGGCCA | 2 cut(s) | 622, 1916 |
| MspI | CCGG | 1 cut(s) | 614 |
| MspR9I | CCNGG | 1 cut(s) | 435 |
| Mva1269I | GAATGC | 1 cut(s) | 1291 |
| MvaI | CCWGG | 1 cut(s) | 435 |
| MvnI | CGCG | 2 cut(s) | 2154, 2273 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1565, 1909 |
| NdeII | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| NlaIV | GGNNCC | 3 cut(s) | 1009, 1536, 2085 |
| NmuCI | GTSAC | 3 cut(s) | 845, 1357, 1418 |
| NsiI | ATGCAT | 1 cut(s) | 1796 |
| NspI | RCATGY | 2 cut(s) | 572, 1598 |
| OliI | CACNNNNGTG | 1 cut(s) | 852 |
| PagI | TCATGA | 3 cut(s) | 673, 1515, 1632 |
| PaqCI | CACCTGC | 1 cut(s) | 335 |
| PciI | ACATGT | 1 cut(s) | 1594 |
| PctI | GAATGC | 1 cut(s) | 1291 |
| PfeI | GAWTC | 5 cut(s) | 167, 191, 819, 1454, 1629 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1872 |
| PkrI | GCNGC | 7 cut(s) | 709, 1093, 1173, 1180, 1327, 1490, 2240 |
| PleI | GAGTC | 1 cut(s) | 1415 |
| PpsI | GAGTC | 1 cut(s) | 1415 |
| PpuMI | RGGWCCY | 1 cut(s) | 107 |
| PscI | ACATGT | 1 cut(s) | 1594 |
| PsiI | TTATAA | 1 cut(s) | 1142 |
| Psp5II | RGGWCCY | 1 cut(s) | 107 |
| Psp6I | CCWGG | 1 cut(s) | 433 |
| PspGI | CCWGG | 1 cut(s) | 433 |
| PspN4I | GGNNCC | 3 cut(s) | 1009, 1536, 2085 |
| PspPI | GGNCC | 5 cut(s) | 107, 1008, 1259, 1534, 2029 |
| PspPPI | RGGWCCY | 1 cut(s) | 107 |
| PstI | CTGCAG | 1 cut(s) | 712 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1331, 1361 |
| PsuI | RGATCY | 5 cut(s) | 288, 310, 900, 1222, 2083 |
| RsaI | GTAC | 2 cut(s) | 427, 1817 |
| RsaNI | GTAC | 2 cut(s) | 426, 1816 |
| RseI | CAYNNNNRTG | 2 cut(s) | 852, 1514 |
| SalI | GTCGAC | 1 cut(s) | 926 |
| SatI | GCNGC | 7 cut(s) | 708, 1092, 1172, 1179, 1326, 1489, 2239 |
| Sau3AI | GATC | 8 cut(s) | 288, 310, 445, 726, 900, 1222, 1990, 2083 |
| Sau96I | GGNCC | 5 cut(s) | 107, 1008, 1259, 1534, 2029 |
| ScaI | AGTACT | 1 cut(s) | 1817 |
| SchI | GAGTC | 1 cut(s) | 1415 |
| ScrFI | CCNGG | 1 cut(s) | 435 |
| SduI | GDGCHC | 4 cut(s) | 326, 394, 1594, 2042 |
| SexAI | ACCWGGT | 1 cut(s) | 433 |
| SfaNI | GCATC | 3 cut(s) | 86, 784, 2012 |
| SfcI | CTRYAG | 1 cut(s) | 708 |
| SinI | GGWCC | 3 cut(s) | 107, 1259, 1534 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 852, 1514 |
| SmlI | CTYRAG | 1 cut(s) | 2129 |
| SmoI | CTYRAG | 1 cut(s) | 2129 |
| SpeI | ACTAGT | 1 cut(s) | 2042 |
| SsiI | CCGC | 2 cut(s) | 2231, 2238 |
| SspI | AATATT | 1 cut(s) | 884 |
| SspMI | CTAG | 7 cut(s) | 195, 279, 470, 633, 717, 2033, 2043 |
| StyD4I | CCNGG | 1 cut(s) | 433 |
| StyI | CCWWGG | 3 cut(s) | 648, 1848, 1917 |
| TaaI | ACNGT | 6 cut(s) | 58, 456, 516, 925, 1333, 1948 |
| TaiI | ACGT | 1 cut(s) | 2226 |
| TaqI | TCGA | 6 cut(s) | 725, 749, 927, 1740, 1989, 2263 |
| TatI | WGTACW | 1 cut(s) | 1815 |
| TauI | GCSGC | 1 cut(s) | 2241 |
| TfiI | GAWTC | 5 cut(s) | 167, 191, 819, 1454, 1629 |
| TscAI | CASTG | 8 cut(s) | 899, 928, 960, 1362, 1432, 1559, 1905, 1953 |
| TseFI | GTSAC | 3 cut(s) | 845, 1357, 1418 |
| TseI | GCWGC | 6 cut(s) | 707, 1091, 1171, 1178, 1325, 1488 |
| Tsp45I | GTSAC | 3 cut(s) | 845, 1357, 1418 |
| TspRI | CASTG | 8 cut(s) | 899, 928, 960, 1362, 1432, 1559, 1905, 1953 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1872 |
| VneI | GTGCAC | 3 cut(s) | 322, 1590, 2038 |
| VpaK11BI | GGWCC | 3 cut(s) | 107, 1259, 1534 |
| XapI | RAATTY | 4 cut(s) | 9, 1316, 1718, 2105 |
| XceI | RCATGY | 2 cut(s) | 572, 1598 |
| XmiI | GTMKAC | 2 cut(s) | 927, 2202 |
| XspI | CTAG | 7 cut(s) | 195, 279, 470, 633, 717, 2033, 2043 |
| ZraI | GACGTC | 1 cut(s) | 2224 |
| ZrmI | AGTACT | 1 cut(s) | 1817 |
| Zsp2I | ATGCAT | 1 cut(s) | 1796 |