RchiOBHm_Chr2g0102801

Zinc finger BED domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001336
Physical Location & Seq
Forward (+)
14440486 .. 14444273
3788 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47720

Sequence Viewer

Length: 2295 bp
ATGGCTTCTACAAGTAGGTCAGGAAGTCATTGTTGTTCATCCCCTTCCATAACTTCTAACATGGGTACTGCAAGTTGTCAATCAATAGGTGTTCCCCCAAATAATAACCAAAACACTATACCACCTCCACAAAACATTACCCCTAACTCAGTTCCTATTCCAACCCCAACTGAAACACCAAATCCAGATCCTCAAACGGTGGAAGCTACTGCGGGATTGGGGAAAAGAAGGTGTCAAGATAAGACCACAAAGGGTAGGAAACAGAGTCGAGTGTGGGACTGTTTCACAAGGCCTTTACTCCCTGATGGCAAGCCTGACCCCGATAATGCACAATGTAATTATTGTAAAGCAATAGTTCCTGCATCTAGTTCAAAGAATGGAACCAGTTCTTGTTGGTCACATGGAAGAAATTGCAAGGTTAACCCTTTATTTGAGAAACCTATCGAGAAAGGGCAGCCTATATTATGTAGGGATAATGTAACCGGGGCTCCACAATATCACAAATTTAATCAAGGTAGGATAGATGAGAAGCTGTACAAGATGATCATAAGGGATGAACTTCCCTTTAGGCATGTAGAGGGTTATGGGTTTAAAGAGTTTTTGTATGAAGCTCAGCCACAGTGGGTTCAACCAAGTAGGAAGTTAGTGGCCAAGGGAGTGTGGGAATTGTACCAATCTGAGAAGGGAAAGATGATGTCCATCTTTGCTCAGCATGCAAAGAGAGTTAGTGTAACCACTGACACTTGGACATCAATTCAGAACATTAACTACATGGTGGTCACTGCCCATTTCATGGATAGCGACTGGAAGTTGCACAAAAGGATTATAAACTTTTGTTCAATTACCAGTCACAAAGGGGAAGACATAGGGAGGGTTTTGGAGCAGTGTTTGAGGGAATGGGATATCAATAGGGTGTTCACTATCACAGTGGACAATGCTAGTTCAAATGACCTAGCCGTTGTATACATGAAAAGAAGGCTGAGGAACATGAACACTTTGAGCTTCGATGGGGACTTTTTGCACCTTCGATGTGCATGTCACATCATCAATTTGATAGTCAAGGACGGAATAAAAGAATTAGAGAATGGGATTGATGCAATTTGGCATTGTGTCAAGTTTATTAGGTCAAGTTCAAGCCGATTAGACAAGTTTAGGGAGTTTTCTGTCCTTGAGCACCTGAATAAGAATGCTAATGTTCCCCTAGATGTGATCACTAGGTGGAATAGCACTTATTTAATGCTTGATGCAGCATTAAAATATGAGAAAGTGTTTGGTAGGATGGCTGATGAAGATGCTCAGTTTCAGCATTACTTTGAGGAGAAAGATACCAAAGGTAGGAAGAGGACAGGCCCCCTTGTAGAGGAAGATTGGAGAAATGCTCAAGCATTTGTGCATTTTCTCAAAAAGTTTTACGAGGCAACACTCAAATTGAGTGCTTGGAAAACTGTGACTGCAAACTTGCAGTTCAAAGAGATGATCGGCCTTCAAACAGAGATTGATAAGAAGGCAAGTGATCCCTCTGATGAGATTTTGCAGAGAGTGGCAATGGGGATGAAAGCCAAATTCGACAAATATTGGGGCAGCTTTGAAATCATGAATCAAATCATGGTGATTGCAAATGTCCTAGACCCTCGTTGGAAACTTCAATATCAAAAAAAAGCATTTGCAAGGGTGGGAATCAGACCTGCCAAGATTGAAATCATTACTAGGGACTTGAAGAACATTCTTTTGAGAATGTATGATGAGTATAGATGTTGTGAGGCAGGTTTAAGCCAATCAAACCAATCAGATGGTGTTGCAGCAATGGAGGGGCTTGAGCTTGATGATTTAGAAGATGGACAAGCTGAGATACTTGTTGATCTCATGCAAGAAAGACTTGAAAATGAACATGAAATGATATCCAACGAGGTTGACAAGTACCTTGCAGATAGATATGTCAATCCTTTAGTAAAAGGCTTTGATGTTTCACAATGGTGGAGGGTCAATGCAGTTGCGTATCCTACTCTTTCAAAGCTTGCAAAAGACATTTTTGCAATTCCTTGCTCTACTGTGGCAAGTGAGAATGCATTTAGCTTGGGAAAAAGGGTAGTTGATCCTTTTAGGAGTTCACTCACTCCTCAAATGGTTGAGGCACTAATCTGCACTAGTGATTGGTTAAGAGTTGAGCAGCCTAATTTCTATTCCAAACCAACAACGGAGGAGCTGTCCTTGTATAAGGATCTAGAAGAACTGCAGAAAGCAACTGCTGCGCTGCATTTGGGAGGTGCAAACTCTTCTACAACAACTGCTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4413 Dimer_Tnp_hAT zf-BED

Protein Analysis

764

Amino Acids

86.98

Weight (kDa)

8.12

Isoelectric Point (pI)

44.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
hAT-like_RNase-H PF14372 481 - 583 1e-16 hAT-like transposase, RNase-H fold
Dimer_Tnp_hAT PF05699 636 - 719 1.5e-26 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 827
Acc36I ACCTGC 2 cut(s) 1693, 1754
AccB7I CCANNNNNTGG 1 cut(s) 793
AccI GTMKAC 1 cut(s) 963
AciI CCGC 1 cut(s) 212
AclWI GGATC 4 cut(s) 182, 1508, 2087, 2226
AcoI YGGCCR 1 cut(s) 648
AcsI RAATTY 2 cut(s) 503, 1562
AdeI CACNNNGTG 1 cut(s) 1218
AfaI GTAC 4 cut(s) 67, 536, 671, 1919
AfiI CCNNNNNNNGG 3 cut(s) 793, 1335, 1360
AhlI ACTAGT 1 cut(s) 2144
AleI CACNNNNGTG 1 cut(s) 1972
Alw21I GWGCWC 1 cut(s) 1176
AlwI GGATC 4 cut(s) 182, 1508, 2087, 2226
AoxI GGCC 4 cut(s) 290, 648, 1348, 1480
ApeKI GCWGC 7 cut(s) 454, 1247, 1581, 1799, 2167, 2246, 2251
ApoI RAATTY 2 cut(s) 503, 1562
Asp700I GAANNNNTTC 1 cut(s) 385
AspLEI GCGC 1 cut(s) 2251
AspS9I GGNCC 1 cut(s) 1349
AsuC2I CCSGG 1 cut(s) 484
AsuHPI GGTGA 1 cut(s) 1621
BalI TGGCCA 1 cut(s) 650
BanII GRGCYC 1 cut(s) 490
BbsI GAAGAC 1 cut(s) 867
Bbv12I GWGCWC 1 cut(s) 1176
BbvCI CCTCAGC 1 cut(s) 980
BbvI GCAGC 7 cut(s) 466, 1259, 1593, 1811, 2179, 2233, 2238
BccI CCATC 6 cut(s) 299, 707, 1001, 1273, 1784, 1829
BceAI ACGGC 1 cut(s) 941
BciVI GTATCC 1 cut(s) 2007
BclI TGATCA 2 cut(s) 543, 1209
BcnI CCSGG 1 cut(s) 484
BcuI ACTAGT 1 cut(s) 2144
BfaI CTAG 9 cut(s) 366, 939, 953, 1202, 1215, 1625, 1707, 2145, 2222
BfmI CTRYAG 1 cut(s) 2231
BfuAI ACCTGC 2 cut(s) 1693, 1754
BfuI GTATCC 1 cut(s) 2007
BisI GCNGC 7 cut(s) 455, 1248, 1582, 1800, 2168, 2247, 2252
BlpI GCTNAGC 2 cut(s) 612, 708
BlsI GCNGC 7 cut(s) 456, 1249, 1583, 1801, 2169, 2248, 2253
Bme1390I CCNGG 1 cut(s) 484
BmgT120I GGNCC 1 cut(s) 1349
BmiI GGNNCC 3 cut(s) 382, 489, 1351
BmrFI CCNGG 1 cut(s) 484
BmsI GCATC 4 cut(s) 371, 1084, 1234, 1282
BpiI GAAGAC 1 cut(s) 867
BplI GAGNNNNNCTC 2 cut(s) 1363, 1395
Bpu10I CCTNAGC 1 cut(s) 980
Bpu1102I GCTNAGC 2 cut(s) 612, 708
BpuEI CTTGAG 3 cut(s) 1190, 1365, 1835
BpuMI CCSGG 1 cut(s) 484
BsaBI GATNNNNATC 2 cut(s) 698, 1697
BsaJI CCNNGG 2 cut(s) 483, 651
BsaXI ACNNNNNCTCC 4 cut(s) 472, 502, 2189, 2219
Bsc4I CCNNNNNNNGG 3 cut(s) 793, 1335, 1360
Bse1I ACTGG 3 cut(s) 384, 809, 846
Bse3DI GCAATG 2 cut(s) 1551, 1809
Bse8I GATNNNNATC 2 cut(s) 698, 1697
BseDI CCNNGG 2 cut(s) 483, 651
BseGI GGATG 4 cut(s) 38, 559, 1284, 1557
BseJI GATNNNNATC 2 cut(s) 698, 1697
BseLI CCNNNNNNNGG 3 cut(s) 793, 1335, 1360
BseMI GCAATG 2 cut(s) 1551, 1809
BseMII CTCAG 7 cut(s) 162, 626, 669, 722, 971, 1310, 1836
BseNI ACTGG 3 cut(s) 384, 809, 846
BseRI GAGGAG 3 cut(s) 1331, 2106, 2213
BseXI GCAGC 7 cut(s) 466, 1259, 1593, 1811, 2179, 2233, 2238
BsgI GTGCAG 1 cut(s) 2125
BshFI GGCC 4 cut(s) 292, 650, 1350, 1482
BsiHKAI GWGCWC 1 cut(s) 1176
BsiSI CCGG 1 cut(s) 483
BslFI GGGAC 3 cut(s) 290, 1025, 1724
BslI CCNNNNNNNGG 3 cut(s) 793, 1335, 1360
BsmFI GGGAC 3 cut(s) 290, 1025, 1724
BsmI GAATGC 2 cut(s) 1192, 2068
BsnI GGCC 4 cut(s) 292, 650, 1350, 1482
Bsp1286I GDGCHC 2 cut(s) 490, 1176
Bsp1407I TGTACA 1 cut(s) 534
Bsp143I GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
Bsp1720I GCTNAGC 2 cut(s) 612, 708
BspACI CCGC 1 cut(s) 212
BspANI GGCC 4 cut(s) 292, 650, 1350, 1482
BspCNI CTCAG 7 cut(s) 161, 625, 670, 721, 972, 1309, 1837
BspHI TCATGA 1 cut(s) 1593
BspLI GGNNCC 3 cut(s) 382, 489, 1351
BspMAI CTGCAG 1 cut(s) 2235
BspMI ACCTGC 2 cut(s) 1693, 1754
BspPI GGATC 4 cut(s) 182, 1508, 2087, 2226
BsrDI GCAATG 2 cut(s) 1551, 1809
BsrGI TGTACA 1 cut(s) 534
BsrI ACTGG 3 cut(s) 384, 809, 846
BssECI CCNNGG 2 cut(s) 483, 651
BssMI GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
BssNAI GTATAC 1 cut(s) 964
BssT1I CCWWGG 1 cut(s) 651
Bst1107I GTATAC 1 cut(s) 964
Bst4CI ACNGT 6 cut(s) 199, 281, 621, 928, 1447, 2050
Bst6I CTCTTC 2 cut(s) 1334, 2278
BstAPI GCANNNNNTGC 1 cut(s) 2246
BstAUI TGTACA 1 cut(s) 534
BstC8I GCNNGC 3 cut(s) 311, 714, 2016
BstDEI CTNAG 7 cut(s) 148, 612, 678, 708, 980, 1296, 1845
BstENI CCTNNNNNAGG 1 cut(s) 1358
BstF5I GGATG 4 cut(s) 38, 559, 1284, 1557
BstHHI GCGC 1 cut(s) 2251
BstKTI GATC 8 cut(s) 190, 546, 1212, 1479, 1516, 1861, 2095, 2221
BstMBI GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
BstMWI GCNNNNNNNGC 2 cut(s) 713, 2246
BstNSI RCATGY 3 cut(s) 575, 716, 1038
BstSCI CCNGG 1 cut(s) 482
BstSFI CTRYAG 1 cut(s) 2231
BstV1I GCAGC 7 cut(s) 466, 1259, 1593, 1811, 2179, 2233, 2238
BstV2I GAAGAC 1 cut(s) 867
BstX2I RGATCY 2 cut(s) 187, 2218
BstXI CCANNNNNNTGG 1 cut(s) 1790
BstYI RGATCY 2 cut(s) 187, 2218
BstZ17I GTATAC 1 cut(s) 964
BsuI GTATCC 1 cut(s) 2007
BsuRI GGCC 4 cut(s) 292, 650, 1350, 1482
BtsCI GGATG 4 cut(s) 38, 559, 1284, 1557
BtsI GCAGTG 2 cut(s) 780, 890
BtsIMutI CAGTG 5 cut(s) 626, 735, 780, 890, 933
BveI ACCTGC 2 cut(s) 1693, 1754
Cac8I GCNNGC 3 cut(s) 311, 714, 2016
CciI TCATGA 1 cut(s) 1593
CfoI GCGC 1 cut(s) 2251
Cfr13I GGNCC 1 cut(s) 1349
Csp6I GTAC 4 cut(s) 66, 535, 670, 1918
CviQI GTAC 4 cut(s) 66, 535, 670, 1918
DdeI CTNAG 7 cut(s) 148, 612, 678, 708, 980, 1296, 1845
DpnI GATC 8 cut(s) 189, 545, 1211, 1478, 1515, 1860, 2094, 2220
DpnII GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
DraI TTTAAA 1 cut(s) 592
DraIII CACNNNGTG 1 cut(s) 1218
EaeI YGGCCR 1 cut(s) 648
Eam1104I CTCTTC 2 cut(s) 1334, 2278
EarI CTCTTC 2 cut(s) 1334, 2278
Eco130I CCWWGG 1 cut(s) 651
Eco147I AGGCCT 1 cut(s) 292
Eco24I GRGCYC 1 cut(s) 490
Eco32I GATATC 2 cut(s) 904, 1899
EcoNI CCTNNNNNAGG 1 cut(s) 1358
EcoO109I RGGNCCY 1 cut(s) 1349
EcoRV GATATC 2 cut(s) 904, 1899
EcoT14I CCWWGG 1 cut(s) 651
EcoT22I ATGCAT 1 cut(s) 2068
EcoT38I GRGCYC 1 cut(s) 490
ErhI CCWWGG 1 cut(s) 651
FalI AAGNNNNNCTT 2 cut(s) 1860, 1892
FaqI GGGAC 3 cut(s) 290, 1025, 1724
FauI CCCGC 1 cut(s) 205
FbaI TGATCA 2 cut(s) 543, 1209
FblI GTMKAC 1 cut(s) 963
Fnu4HI GCNGC 7 cut(s) 455, 1248, 1582, 1800, 2168, 2247, 2252
FokI GGATG 4 cut(s) 25, 566, 1291, 1564
FriOI GRGCYC 1 cut(s) 490
Fsp4HI GCNGC 7 cut(s) 455, 1248, 1582, 1800, 2168, 2247, 2252
FspBI CTAG 9 cut(s) 366, 939, 953, 1202, 1215, 1625, 1707, 2145, 2222
GlaI GCGC 1 cut(s) 2250
GluI GCNGC 7 cut(s) 455, 1248, 1582, 1800, 2168, 2247, 2252
HaeIII GGCC 4 cut(s) 292, 650, 1350, 1482
HapII CCGG 1 cut(s) 483
HhaI GCGC 1 cut(s) 2251
Hin6I GCGC 1 cut(s) 2249
HinP1I GCGC 1 cut(s) 2249
HincII GTYRAC 2 cut(s) 421, 1912
HindII GTYRAC 2 cut(s) 421, 1912
HindIII AAGCTT 1 cut(s) 2012
HinfI GANTC 3 cut(s) 265, 1597, 1677
HpaI GTTAAC 1 cut(s) 421
HpaII CCGG 1 cut(s) 483
HphI GGTGA 1 cut(s) 1621
Hpy166II GTNNAC 6 cut(s) 421, 918, 931, 964, 1912, 2108
Hpy188I TCNGA 5 cut(s) 679, 759, 1522, 1682, 1789
Hpy188III TCNNGA 6 cut(s) 21, 185, 236, 445, 1594, 2222
Hpy8I GTNNAC 6 cut(s) 421, 918, 931, 964, 1912, 2108
HpyAV CCTTC 7 cut(s) 54, 222, 676, 969, 1034, 1493, 1498
HpyCH4III ACNGT 6 cut(s) 199, 281, 621, 928, 1447, 2050
HpyF10VI GCNNNNNNNGC 2 cut(s) 713, 2246
HpyF3I CTNAG 7 cut(s) 148, 612, 678, 708, 980, 1296, 1845
HspAI GCGC 1 cut(s) 2249
Ksp22I TGATCA 2 cut(s) 543, 1209
KspAI GTTAAC 1 cut(s) 421
Kzo9I GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
LmnI GCTCC 3 cut(s) 493, 880, 2200
Lsp1109I GCAGC 7 cut(s) 466, 1259, 1593, 1811, 2179, 2233, 2238
LweI GCATC 4 cut(s) 371, 1084, 1234, 1282
MaeI CTAG 9 cut(s) 366, 939, 953, 1202, 1215, 1625, 1707, 2145, 2222
MaeIII GTNAC 7 cut(s) 396, 478, 730, 778, 848, 1037, 1447
MalI GATC 8 cut(s) 189, 545, 1211, 1478, 1515, 1860, 2094, 2220
MboI GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
MboII GAAGA 9 cut(s) 417, 872, 1301, 1351, 1376, 1729, 1844, 2237, 2265
MflI RGATCY 2 cut(s) 187, 2218
MhlI GDGCHC 2 cut(s) 490, 1176
MlsI TGGCCA 1 cut(s) 650
MluNI TGGCCA 1 cut(s) 650
MlyI GAGTC 1 cut(s) 274
MmeI TCCRAC 3 cut(s) 185, 1616, 1926
Mox20I TGGCCA 1 cut(s) 650
Mph1103I ATGCAT 1 cut(s) 2068
MroXI GAANNNNTTC 1 cut(s) 385
MscI TGGCCA 1 cut(s) 650
MseI TTAA 8 cut(s) 420, 507, 591, 765, 1235, 1253, 1769, 2156
MslI CAYNNNNRTG 1 cut(s) 1972
Msp20I TGGCCA 1 cut(s) 650
MspI CCGG 1 cut(s) 483
MspR9I CCNGG 1 cut(s) 484
Mva1269I GAATGC 2 cut(s) 1192, 2068
MwoI GCNNNNNNNGC 2 cut(s) 713, 2246
NciI CCSGG 1 cut(s) 484
NdeII GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
NlaIV GGNNCC 3 cut(s) 382, 489, 1351
NmuCI GTSAC 5 cut(s) 396, 778, 848, 1037, 1447
NsiI ATGCAT 1 cut(s) 2068
NspI RCATGY 3 cut(s) 575, 716, 1038
OliI CACNNNNGTG 1 cut(s) 1972
PaeI GCATGC 1 cut(s) 716
PagI TCATGA 1 cut(s) 1593
PceI AGGCCT 1 cut(s) 292
PctI GAATGC 2 cut(s) 1192, 2068
PdmI GAANNNNTTC 1 cut(s) 385
PfeI GAWTC 2 cut(s) 1597, 1677
PflMI CCANNNNNTGG 1 cut(s) 793
PkrI GCNGC 7 cut(s) 456, 1249, 1583, 1801, 2169, 2248, 2253
PleI GAGTC 1 cut(s) 273
PpsI GAGTC 1 cut(s) 273
PsiI TTATAA 1 cut(s) 827
PspN4I GGNNCC 3 cut(s) 382, 489, 1351
PspPI GGNCC 1 cut(s) 1349
PsrI GAACNNNNNNTAC 2 cut(s) 752, 784
PstI CTGCAG 1 cut(s) 2235
PsuI RGATCY 2 cut(s) 187, 2218
RsaI GTAC 4 cut(s) 67, 536, 671, 1919
RsaNI GTAC 4 cut(s) 66, 535, 670, 1918
RseI CAYNNNNRTG 1 cut(s) 1972
SaqAI TTAA 8 cut(s) 420, 507, 591, 765, 1235, 1253, 1769, 2156
SatI GCNGC 7 cut(s) 455, 1248, 1582, 1800, 2168, 2247, 2252
Sau3AI GATC 8 cut(s) 187, 543, 1209, 1476, 1513, 1858, 2092, 2218
Sau96I GGNCC 1 cut(s) 1349
SchI GAGTC 1 cut(s) 274
ScrFI CCNGG 1 cut(s) 484
SduI GDGCHC 2 cut(s) 490, 1176
SfaNI GCATC 4 cut(s) 371, 1084, 1234, 1282
SfcI CTRYAG 1 cut(s) 2231
SmiMI CAYNNNNRTG 1 cut(s) 1972
SmlI CTYRAG 3 cut(s) 1169, 1380, 1814
SmoI CTYRAG 3 cut(s) 1169, 1380, 1814
SpeI ACTAGT 1 cut(s) 2144
SphI GCATGC 1 cut(s) 716
SseBI AGGCCT 1 cut(s) 292
SsiI CCGC 1 cut(s) 212
SspI AATATT 1 cut(s) 1574
SspMI CTAG 9 cut(s) 366, 939, 953, 1202, 1215, 1625, 1707, 2145, 2222
StuI AGGCCT 1 cut(s) 292
StyD4I CCNGG 1 cut(s) 482
StyI CCWWGG 1 cut(s) 651
TaaI ACNGT 6 cut(s) 199, 281, 621, 928, 1447, 2050
TaqI TCGA 5 cut(s) 268, 444, 1005, 1027, 1566
TatI WGTACW 1 cut(s) 534
TfiI GAWTC 2 cut(s) 1597, 1677
Tru1I TTAA 8 cut(s) 420, 507, 591, 765, 1235, 1253, 1769, 2156
Tru9I TTAA 8 cut(s) 420, 507, 591, 765, 1235, 1253, 1769, 2156
TscAI CASTG 5 cut(s) 626, 742, 787, 890, 933
TseFI GTSAC 5 cut(s) 396, 778, 848, 1037, 1447
TseI GCWGC 7 cut(s) 454, 1247, 1581, 1799, 2167, 2246, 2251
Tsp45I GTSAC 5 cut(s) 396, 778, 848, 1037, 1447
TspGWI ACGGA 2 cut(s) 1080, 2210
TspRI CASTG 5 cut(s) 626, 742, 787, 890, 933
Van91I CCANNNNNTGG 1 cut(s) 793
XagI CCTNNNNNAGG 1 cut(s) 1358
XapI RAATTY 2 cut(s) 503, 1562
XbaI TCTAGA 1 cut(s) 2221
XceI RCATGY 3 cut(s) 575, 716, 1038
XmiI GTMKAC 1 cut(s) 963
XmnI GAANNNNTTC 1 cut(s) 385
XspI CTAG 9 cut(s) 366, 939, 953, 1202, 1215, 1625, 1707, 2145, 2222
Zsp2I ATGCAT 1 cut(s) 2068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.