Rh7BG358400

Zinc finger BED domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
37690902 .. 37691419
518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG358400.1

Sequence Viewer

Length: 432 bp
ATGGCTTCTACAAGTAGGTCAGGAAGTCGTTGTTGTTCATCCCCGTCCATAACATCCAACATGGTTAGTGAAAGTGCTCAACCAACAATGGTTTCCCCAAATACTAACCTAAACCCTATACCAGTATTAGAAAACATTACCCCGGACTCAGTTCCTGTTCCAACCCCAAATACTACACCAAATTTAGATCCTACCTCAGTGGAAGACACTGCGGGGCTAGGGAAAAGGAAAACACAAGAAAAGACCACAAAGGGTAGGAAAAAGAGTCAAGTCTGGGATTGTTTCAGTAGGCCTTTGCTCCCTGATGGCAAGGCTGACCCAGATAATGCCCAATGCAACTATTGTAAGGCAATAGTTCCTGCATCTAGTTCCAAAAATGGAACCAGTTCTTGCTGGTCCCATGCTAGAAACTGCAAGATTCAATCAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

15.18

Weight (kDa)

8.92

Isoelectric Point (pI)

51.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 212
AclWI GGATC 1 cut(s) 182
AcsI RAATTY 1 cut(s) 181
AgsI TTSAA 1 cut(s) 422
AjuI GAANNNNNNNTTGG 2 cut(s) 76, 108
Alw21I GWGCWC 1 cut(s) 79
AlwI GGATC 1 cut(s) 182
AlwNI CAGNNNCTG 1 cut(s) 155
AoxI GGCC 1 cut(s) 290
ApoI RAATTY 1 cut(s) 181
Asp700I GAANNNNTTC 1 cut(s) 385
AspS9I GGNCC 1 cut(s) 396
AsuC2I CCSGG 1 cut(s) 143
AvaII GGWCC 1 cut(s) 396
BbsI GAAGAC 1 cut(s) 210
Bbv12I GWGCWC 1 cut(s) 79
BccI CCATC 1 cut(s) 299
BcnI CCSGG 1 cut(s) 143
BfaI CTAG 3 cut(s) 218, 366, 405
Bme1390I CCNGG 1 cut(s) 143
Bme18I GGWCC 1 cut(s) 396
BmgT120I GGNCC 1 cut(s) 396
BmiI GGNNCC 2 cut(s) 382, 398
BmrFI CCNGG 1 cut(s) 143
BmsI GCATC 1 cut(s) 371
BpiI GAAGAC 1 cut(s) 210
BpuMI CCSGG 1 cut(s) 143
BsaJI CCNNGG 1 cut(s) 141
Bse1I ACTGG 2 cut(s) 122, 384
BseDI CCNNGG 1 cut(s) 141
BseGI GGATG 2 cut(s) 38, 53
BseMII CTCAG 2 cut(s) 162, 210
BseNI ACTGG 2 cut(s) 122, 384
BshFI GGCC 1 cut(s) 292
BsiHKAI GWGCWC 1 cut(s) 79
BsiSI CCGG 1 cut(s) 143
BslFI GGGAC 1 cut(s) 382
BsmFI GGGAC 1 cut(s) 382
BsnI GGCC 1 cut(s) 292
Bsp1286I GDGCHC 1 cut(s) 79
Bsp143I GATC 1 cut(s) 187
BspACI CCGC 1 cut(s) 212
BspANI GGCC 1 cut(s) 292
BspCNI CTCAG 2 cut(s) 161, 209
BspLI GGNNCC 2 cut(s) 382, 398
BspPI GGATC 1 cut(s) 182
BsrI ACTGG 2 cut(s) 122, 384
BssECI CCNNGG 1 cut(s) 141
BssMI GATC 1 cut(s) 187
BstDEI CTNAG 2 cut(s) 148, 196
BstF5I GGATG 2 cut(s) 38, 53
BstKTI GATC 1 cut(s) 190
BstMBI GATC 1 cut(s) 187
BstSCI CCNGG 1 cut(s) 141
BstV2I GAAGAC 1 cut(s) 210
BstX2I RGATCY 1 cut(s) 187
BstYI RGATCY 1 cut(s) 187
BsuRI GGCC 1 cut(s) 292
BtsCI GGATG 2 cut(s) 38, 53
BtsI GCAGTG 1 cut(s) 207
BtsIMutI CAGTG 2 cut(s) 204, 207
CaiI CAGNNNCTG 1 cut(s) 155
Cfr13I GGNCC 1 cut(s) 396
CviAII CATG 2 cut(s) 61, 401
CviJI RGCY 4 cut(s) 5, 217, 292, 314
CviKI_1 RGCY 4 cut(s) 5, 217, 292, 314
DdeI CTNAG 2 cut(s) 148, 196
DpnI GATC 1 cut(s) 189
DpnII GATC 1 cut(s) 187
Eco147I AGGCCT 1 cut(s) 292
Eco47I GGWCC 1 cut(s) 396
FaeI CATG 2 cut(s) 64, 404
FaiI YATR 4 cut(s) 50, 62, 119, 402
FaqI GGGAC 1 cut(s) 382
FatI CATG 2 cut(s) 60, 400
FauI CCCGC 1 cut(s) 205
FokI GGATG 2 cut(s) 25, 40
FspBI CTAG 3 cut(s) 218, 366, 405
HaeIII GGCC 1 cut(s) 292
HapII CCGG 1 cut(s) 143
Hin1II CATG 2 cut(s) 64, 404
HinfI GANTC 3 cut(s) 146, 265, 418
HpaII CCGG 1 cut(s) 143
Hpy188III TCNNGA 1 cut(s) 21
HpyCH4V TGCA 3 cut(s) 336, 362, 414
HpyF3I CTNAG 2 cut(s) 148, 196
Hsp92II CATG 2 cut(s) 64, 404
Kzo9I GATC 1 cut(s) 187
LmnI GCTCC 1 cut(s) 303
LweI GCATC 1 cut(s) 371
MaeI CTAG 3 cut(s) 218, 366, 405
MalI GATC 1 cut(s) 189
MboI GATC 1 cut(s) 187
MboII GAAGA 1 cut(s) 215
MflI RGATCY 1 cut(s) 187
MhlI GDGCHC 1 cut(s) 79
MluCI AATT 1 cut(s) 181
MlyI GAGTC 2 cut(s) 140, 274
MmeI TCCRAC 2 cut(s) 81, 185
MnlI CCTC 1 cut(s) 205
MroXI GAANNNNTTC 1 cut(s) 385
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 1 cut(s) 143
NciI CCSGG 1 cut(s) 143
NdeII GATC 1 cut(s) 187
NlaIII CATG 2 cut(s) 64, 404
NlaIV GGNNCC 2 cut(s) 382, 398
PceI AGGCCT 1 cut(s) 292
PdmI GAANNNNTTC 1 cut(s) 385
PfeI GAWTC 1 cut(s) 418
PleI GAGTC 2 cut(s) 140, 273
PpsI GAGTC 2 cut(s) 140, 273
PspN4I GGNNCC 2 cut(s) 382, 398
PspPI GGNCC 1 cut(s) 396
PstNI CAGNNNCTG 1 cut(s) 155
PsuI RGATCY 1 cut(s) 187
Sau3AI GATC 1 cut(s) 187
Sau96I GGNCC 1 cut(s) 396
SchI GAGTC 2 cut(s) 140, 274
ScrFI CCNGG 1 cut(s) 143
SduI GDGCHC 1 cut(s) 79
SetI ASST 3 cut(s) 20, 111, 197
SfaNI GCATC 1 cut(s) 371
SinI GGWCC 1 cut(s) 396
Sse9I AATT 1 cut(s) 181
SseBI AGGCCT 1 cut(s) 292
SsiI CCGC 1 cut(s) 212
SspMI CTAG 3 cut(s) 218, 366, 405
StuI AGGCCT 1 cut(s) 292
StyD4I CCNGG 1 cut(s) 141
TasI AATT 1 cut(s) 181
TfiI GAWTC 1 cut(s) 418
TscAI CASTG 2 cut(s) 204, 214
TspDTI ATGAA 1 cut(s) 27
TspRI CASTG 2 cut(s) 204, 214
VpaK11BI GGWCC 1 cut(s) 396
XapI RAATTY 1 cut(s) 181
XmnI GAANNNNTTC 1 cut(s) 385
XspI CTAG 3 cut(s) 218, 366, 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.