FvH4_6g44064

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000564
Physical Location & Seq
Reverse (-)
33989981 .. 33994841
4861 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g44064.t2

Sequence Viewer

Length: 2358 bp
ATGGAAACCAGAAGCATCCCAATTAAGCTGATGATCTCCTTTTTCTTCTCATGCCTATATCTCAGTACTTCTATCTCCCTTGCAGCTGACTCCATCACTACAATCCAATCTCTATCTGGTGATCAAACCATTGTTTCAGCAGGTGGGGTTTTTCAATTGGGTTTCTTCACACCAGGTACTGCTTCAAACTTCTACATAGGCATGTGGTACACGCAAGTATCAGAGCGAACCATAGTCTGGGTGGCAAATAGGGAACAACCTGTCTTTGATATATTTTCTTCAGTATTGAAGATCTCAGATGGTAATTTAGTACTCTATGATGAGTCCAACACTCCAATTTGGTCTACAAATGTGGCCTCCAACATCACCTTAGGCACTTCTATACAAGCTGTTCTTTTAGATGATGGAAACTTTGTCTTAAGACCCGAGTCTGGTTCCTCCCACCCTTTATGGCAAAGTTTTGATCATCCATCCCATACTTTTCTACCAGGAAGTAAATTGGGATTCAACAGAGTTACCAAACAAAGCCAGATGCTTATTTCATGGAAAAATTCAGAGGATCCTTCACCGGGTCAATTCTCACTTGAGGTAGACCCAACAAGCAACTCATATATCATAAAGTGGAATAGGTCTAAACAGTATTGGACAAGTGGATCTTGGGATGAAAACGAACATACTTTCAGTTTGCTCCCCGAGATGAAGCTTAACTATAGCTACAATCTTAGCTATGTTACAAATGAAAATGAGAGCTACTTCACCTATTCTCTTTATGATGCTAGCATTACATCTCGACTCATAATGGATGTAACGGGTCAGCTTAAGCAACTGTCCTGGTTTAAAGCTCAAGGATGGAACTTGTTTTGGGCTCAGCCGAAGAGACAATGTGAAGTTTATGGTCTATGTGGGGCATTTAGTAGTTGCAATGAAAACTCCTTGCCCTTCTGTAAGTGTCTGATGGGTTTTGAACCAAAGTCAGTGACCCGTTGGGATTTGCAGGATTACTCTGATGGGTGTTCAAGAAAAACCAGGTTGAATTGTGGAAATGTTACTGGTGTTGATGGCACGAGTGACAGCCGCTACAGATATAGCAGCTCTTCTTCTGAATGTTCAACTTGGAAGGGAGATCTGTTGGCGGATGAAAATGGAAGAACTGTATACATAAGAATAGCAGCTTCGGATTATAAGAATCTCAAAAGTAGAAAACGGACCATTGTAATTACAACAGTGGCAGCAACAGCAGGGTTGCTCACTATAGTTTTTCTTGGCTATTTTTTAATGAAGAAAACTTTGGGAAAGAGAAGAACTTTACAGAATCTTAGTGCTGCTGGTGTGGAGAATGATACAGAACTACAACTATTTAGTTTGAGGAGTATATTAGTAGCTACTAATAACTTCTCTGAAGGGAATAAGCTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTGGCCATAAAAAGGCTATCAAAGAAGTCCGGGCAAGGACAACAGGAGTTCAAGAATGAGTTGAAGCTTATAGCGAAGCTCCAACATACCAATCTTGTTAGACTCTTGGGCTGCTGCATTGAAGCAGAGGAAATGATATTGATGTATGAGTACTTGCCAAATCGAAGTTTGGACAAATTTCTGTTCGATCCATCCGAAAAGACAAAATTGGATTGGGGTAAACGTTTTAGAATTATAGAAGGTATAGCTCAAGGATTGCTTTATATCCACAAGTACTCGAGACTAAAAATCATTCACAGGGATCTAAAAGCAAGTAATGTTCTATTGGATGGAACATTGAACCCCAAGATTTCTGACTTTGGAATCGCAAAGATTTTTGATATGAATCAAACTGAAGCAAATACTAACAGGGTTGTAGGGACCTACGGTTACATGTCCCCTGAGTATGCACGCTATGGTCATTTCTCTGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGTTGTTGGAGATTGTAAGTGGAAAGAAGAATGCTAGTTTCTATCGTTTTGAAAGAGTATTAACTCTCTCTGGATGGGCATGGGACCTATGGAAAGAAGGAAGAGGAGCAGAGGTGATTGATGCATCAGTAAGGGAAACAATTCGGATTCATGGAGCTTTAAGGTGTATCCATGTAGGACTTTTGTGCGTTCAAGAATCTGCAGCTGATCGACCTGCAATGGCATCAGTAATTCACATGTTGCAGGGAAATGAAGCTACATCTCTTCCACCCGCCAATGAACCCGCTTTTTCAACACAGACGAATATCAGTACTGCTACAGGTTATTTTTCTCAAACATCTACCAATTATTCAAACAACGCACTCACGATTAGTTTGCCAGAAGCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

786

Amino Acids

88.03

Weight (kDa)

8.06

Isoelectric Point (pI)

35.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 183 3.9e-33 D-mannose binding lectin
S_locus_glycop PF00954 215 - 325 3.9e-29 S-locus glycoprotein domain
PAN_2 PF08276 355 - 414 2.9e-12 PAN-like domain
Pkinase PF00069 503 - 702 1.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 505 - 769 1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1182, 1440
AarI CACCTGC 1 cut(s) 131
Acc36I ACCTGC 2 cut(s) 131, 2188
AccB7I CCANNNNNTGG 1 cut(s) 237
AccI GTMKAC 3 cut(s) 344, 591, 1155
AciI CCGC 4 cut(s) 1075, 1133, 2238, 2250
AclI AACGTT 1 cut(s) 1690
AclWI GGATC 5 cut(s) 554, 567, 661, 1649, 1776
AcoI YGGCCR 1 cut(s) 1470
AcsI RAATTY 2 cut(s) 550, 1643
AcuI CTGAAG 3 cut(s) 264, 1419, 1881
AfaI GTAC 7 cut(s) 67, 178, 209, 312, 1619, 1742, 2278
AfiI CCNNNNNNNGG 4 cut(s) 237, 431, 569, 1479
AflII CTTAAG 2 cut(s) 418, 818
AflIII ACRYGT 2 cut(s) 1899, 2202
AjnI CCWGG 4 cut(s) 172, 487, 830, 1025
AjuI GAANNNNNNNTTGG 2 cut(s) 1271, 1303
Alw26I GTCTC 2 cut(s) 871, 1741
AlwI GGATC 5 cut(s) 554, 567, 661, 1649, 1776
AlwNI CAGNNNCTG 1 cut(s) 179
Ama87I CYCGRG 3 cut(s) 425, 692, 1744
AoxI GGCC 3 cut(s) 354, 1429, 1470
ApeKI GCWGC 8 cut(s) 83, 1089, 1169, 1229, 1322, 1578, 1581, 2168
ApoI RAATTY 2 cut(s) 550, 1643
Asp700I GAANNNNTTC 1 cut(s) 2106
AspS9I GGNCC 4 cut(s) 1206, 1430, 1887, 2050
AsuC2I CCSGG 2 cut(s) 570, 1498
AsuHPI GGTGA 5 cut(s) 131, 358, 558, 748, 2092
AsuNHI GCTAGC 1 cut(s) 776
AvaI CYCGRG 3 cut(s) 425, 692, 1744
AvaII GGWCC 3 cut(s) 1206, 1887, 2050
AxyI CCTNAGG 1 cut(s) 370
BaeI ACNNNNGTAYC 2 cut(s) 201, 234
BalI TGGCCA 1 cut(s) 1472
BamHI GGATCC 1 cut(s) 559
BanII GRGCYC 1 cut(s) 868
BauI CACGAG 1 cut(s) 1063
BbvI GCAGC 8 cut(s) 95, 1101, 1181, 1241, 1309, 1565, 1568, 2180
BcgI CGANNNNNNTGC 2 cut(s) 2323, 2357
BciT130I CCWGG 4 cut(s) 174, 489, 832, 1027
BciVI GTATCC 1 cut(s) 2144
BclI TGATCA 2 cut(s) 121, 463
BcnI CCSGG 2 cut(s) 570, 1498
BcoDI GTCTC 2 cut(s) 871, 1741
BfaI CTAG 3 cut(s) 777, 1412, 2001
BfmI CTRYAG 5 cut(s) 709, 1078, 1251, 2166, 2283
BfrI CTTAAG 2 cut(s) 418, 818
BfuAI ACCTGC 2 cut(s) 131, 2188
BfuI GTATCC 1 cut(s) 2144
BglII AGATCT 2 cut(s) 291, 1123
BisI GCNGC 9 cut(s) 84, 1075, 1090, 1170, 1230, 1323, 1579, 1582, 2169
BlpI GCTNAGC 1 cut(s) 867
BlsI GCNGC 9 cut(s) 85, 1076, 1091, 1171, 1231, 1324, 1580, 1583, 2170
BmcAI AGTACT 5 cut(s) 67, 312, 1619, 1742, 2278
Bme1390I CCNGG 6 cut(s) 174, 489, 570, 832, 1027, 1498
Bme18I GGWCC 3 cut(s) 1206, 1887, 2050
BmeT110I CYCGRG 3 cut(s) 425, 692, 1744
BmgT120I GGNCC 4 cut(s) 1206, 1430, 1887, 2050
BmiI GGNNCC 4 cut(s) 436, 561, 1888, 2051
BmrFI CCNGG 6 cut(s) 174, 489, 570, 832, 1027, 1498
BmsI GCATC 6 cut(s) 24, 522, 763, 2077, 2099, 2198
BmtI GCTAGC 1 cut(s) 780
BoxI GACNNNNGTC 1 cut(s) 427
Bpu1102I GCTNAGC 1 cut(s) 867
BpuEI CTTGAG 3 cut(s) 605, 828, 1701
BpuMI CCSGG 2 cut(s) 570, 1498
BsaBI GATNNNNATC 1 cut(s) 1851
BsaXI ACNNNNNCTCC 2 cut(s) 2064, 2094
Bsc4I CCNNNNNNNGG 4 cut(s) 237, 431, 569, 1479
Bse1I ACTGG 1 cut(s) 1054
Bse21I CCTNAGG 1 cut(s) 370
Bse3DI GCAATG 2 cut(s) 928, 2190
Bse8I GATNNNNATC 1 cut(s) 1851
BseBI CCWGG 4 cut(s) 174, 489, 832, 1027
BseJI GATNNNNATC 1 cut(s) 1851
BseLI CCNNNNNNNGG 4 cut(s) 237, 431, 569, 1479
BseMI GCAATG 2 cut(s) 928, 2190
BseMII CTCAG 5 cut(s) 76, 309, 881, 1899, 1926
BseNI ACTGG 1 cut(s) 1054
BseRI GAGGAG 2 cut(s) 1381, 2085
BseXI GCAGC 8 cut(s) 95, 1101, 1181, 1241, 1309, 1565, 1568, 2180
BshFI GGCC 3 cut(s) 356, 1431, 1472
BsiHKCI CYCGRG 3 cut(s) 425, 692, 1744
BsiSI CCGG 2 cut(s) 569, 1497
BslFI GGGAC 3 cut(s) 1888, 1900, 2063
BslI CCNNNNNNNGG 4 cut(s) 237, 431, 569, 1479
BsmAI GTCTC 2 cut(s) 871, 1741
BsmFI GGGAC 3 cut(s) 1888, 1900, 2063
BsmI GAATGC 1 cut(s) 2002
BsnI GGCC 3 cut(s) 356, 1431, 1472
BsoBI CYCGRG 3 cut(s) 425, 692, 1744
Bsp1286I GDGCHC 1 cut(s) 868
Bsp1720I GCTNAGC 1 cut(s) 867
BspACI CCGC 4 cut(s) 1075, 1133, 2238, 2250
BspANI GGCC 3 cut(s) 356, 1431, 1472
BspCNI CTCAG 5 cut(s) 75, 308, 880, 1900, 1927
BspLI GGNNCC 4 cut(s) 436, 561, 1888, 2051
BspMAI CTGCAG 1 cut(s) 2170
BspMI ACCTGC 2 cut(s) 131, 2188
BspOI GCTAGC 1 cut(s) 780
BspPI GGATC 5 cut(s) 554, 567, 661, 1649, 1776
BspQI GCTCTTC 1 cut(s) 1099
BspTI CTTAAG 2 cut(s) 418, 818
BsrDI GCAATG 2 cut(s) 928, 2190
BsrI ACTGG 1 cut(s) 1054
BssNAI GTATAC 1 cut(s) 1156
BssSI CACGAG 1 cut(s) 1063
Bst1107I GTATAC 1 cut(s) 1156
Bst2BI CACGAG 1 cut(s) 1063
Bst2UI CCWGG 4 cut(s) 174, 489, 832, 1027
Bst4CI ACNGT 5 cut(s) 639, 828, 1153, 1225, 1895
Bst6I CTCTTC 4 cut(s) 869, 1099, 2062, 2235
BstAFI CTTAAG 2 cut(s) 418, 818
BstC8I GCNNGC 2 cut(s) 778, 1918
BstDEI CTNAG 8 cut(s) 62, 295, 370, 722, 867, 1316, 1908, 1935
BstMAI GTCTC 2 cut(s) 871, 1741
BstMWI GCNNNNNNNGC 1 cut(s) 1235
BstNI CCWGG 4 cut(s) 174, 489, 832, 1027
BstNSI RCATGY 3 cut(s) 205, 1903, 2206
BstPAI GACNNNNGTC 1 cut(s) 427
BstSCI CCNGG 6 cut(s) 172, 487, 568, 830, 1025, 1496
BstSFI CTRYAG 5 cut(s) 709, 1078, 1251, 2166, 2283
BstV1I GCAGC 8 cut(s) 95, 1101, 1181, 1241, 1309, 1565, 1568, 2180
BstX2I RGATCY 5 cut(s) 291, 559, 653, 1123, 1768
BstYI RGATCY 5 cut(s) 291, 559, 653, 1123, 1768
BstZ17I GTATAC 1 cut(s) 1156
Bsu36I CCTNAGG 1 cut(s) 370
BsuI GTATCC 1 cut(s) 2144
BsuRI GGCC 3 cut(s) 356, 1431, 1472
BtsIMutI CAGTG 2 cut(s) 981, 1230
BveI ACCTGC 2 cut(s) 131, 2188
Cac8I GCNNGC 2 cut(s) 778, 1918
CaiI CAGNNNCTG 1 cut(s) 179
Cfr13I GGNCC 4 cut(s) 1206, 1430, 1887, 2050
CsiI ACCWGGT 2 cut(s) 172, 1025
Csp6I GTAC 7 cut(s) 66, 177, 208, 311, 1618, 1741, 2277
CviAII CATG 8 cut(s) 51, 202, 543, 1900, 2046, 2117, 2138, 2203
CviQI GTAC 7 cut(s) 66, 177, 208, 311, 1618, 1741, 2277
DdeI CTNAG 8 cut(s) 62, 295, 370, 722, 867, 1316, 1908, 1935
DraI TTTAAA 1 cut(s) 838
EaeI YGGCCR 1 cut(s) 1470
Eam1104I CTCTTC 4 cut(s) 869, 1099, 2062, 2235
EarI CTCTTC 4 cut(s) 869, 1099, 2062, 2235
EciI GGCGGA 1 cut(s) 1148
Eco24I GRGCYC 1 cut(s) 868
Eco47I GGWCC 3 cut(s) 1206, 1887, 2050
Eco57I CTGAAG 3 cut(s) 264, 1419, 1881
Eco81I CCTNAGG 1 cut(s) 370
Eco88I CYCGRG 3 cut(s) 425, 692, 1744
EcoO109I RGGNCCY 2 cut(s) 1887, 2050
EcoRII CCWGG 4 cut(s) 172, 487, 830, 1025
EcoT22I ATGCAT 1 cut(s) 2092
EcoT38I GRGCYC 1 cut(s) 868
FaeI CATG 8 cut(s) 54, 205, 546, 1903, 2049, 2120, 2141, 2206
FalI AAGNNNNNCTT 6 cut(s) 378, 410, 640, 672, 1710, 1742
FaqI GGGAC 3 cut(s) 1888, 1900, 2063
FatI CATG 8 cut(s) 50, 201, 542, 1899, 2045, 2116, 2137, 2202
FauI CCCGC 2 cut(s) 2245, 2257
FbaI TGATCA 2 cut(s) 121, 463
FblI GTMKAC 3 cut(s) 344, 591, 1155
Fnu4HI GCNGC 9 cut(s) 84, 1075, 1090, 1170, 1230, 1323, 1579, 1582, 2169
FriOI GRGCYC 1 cut(s) 868
Fsp4HI GCNGC 9 cut(s) 84, 1075, 1090, 1170, 1230, 1323, 1579, 1582, 2169
FspBI CTAG 3 cut(s) 777, 1412, 2001
GluI GCNGC 9 cut(s) 84, 1075, 1090, 1170, 1230, 1323, 1579, 1582, 2169
HaeIII GGCC 3 cut(s) 356, 1431, 1472
HapII CCGG 2 cut(s) 569, 1497
Hin1II CATG 8 cut(s) 54, 205, 546, 1903, 2049, 2120, 2141, 2206
HindIII AAGCTT 2 cut(s) 701, 1532
HpaII CCGG 2 cut(s) 569, 1497
HphI GGTGA 5 cut(s) 131, 358, 558, 748, 2092
Hpy166II GTNNAC 5 cut(s) 210, 345, 592, 1156, 1688
Hpy188III TCNNGA 8 cut(s) 789, 1017, 1463, 1519, 1746, 2037, 2159, 2332
Hpy8I GTNNAC 5 cut(s) 210, 345, 592, 1156, 1688
HpyAV CCTTC 6 cut(s) 573, 949, 1111, 1394, 1700, 2057
HpyCH4III ACNGT 5 cut(s) 639, 828, 1153, 1225, 1895
HpyCH4IV ACGT 1 cut(s) 1690
HpyCH4V TGCA 9 cut(s) 83, 921, 994, 1584, 1916, 2090, 2168, 2183, 2209
HpyF10VI GCNNNNNNNGC 1 cut(s) 1235
HpyF3I CTNAG 8 cut(s) 62, 295, 370, 722, 867, 1316, 1908, 1935
HpySE526I ACGT 1 cut(s) 1690
Hsp92II CATG 8 cut(s) 54, 205, 546, 1903, 2049, 2120, 2141, 2206
Ksp22I TGATCA 2 cut(s) 121, 463
LguI GCTCTTC 1 cut(s) 1099
LmnI GCTCC 4 cut(s) 693, 1551, 2072, 2120
Lsp1109I GCAGC 8 cut(s) 95, 1101, 1181, 1241, 1309, 1565, 1568, 2180
LweI GCATC 6 cut(s) 24, 522, 763, 2077, 2099, 2198
MabI ACCWGGT 2 cut(s) 172, 1025
MaeI CTAG 3 cut(s) 777, 1412, 2001
MaeII ACGT 1 cut(s) 1690
MaeIII GTNAC 7 cut(s) 514, 730, 805, 976, 1045, 1067, 1895
MfeI CAATTG 1 cut(s) 155
MflI RGATCY 5 cut(s) 291, 559, 653, 1123, 1768
MhlI GDGCHC 1 cut(s) 868
MlsI TGGCCA 1 cut(s) 1472
MluNI TGGCCA 1 cut(s) 1472
MlyI GAGTC 5 cut(s) 83, 332, 437, 786, 1563
MmeI TCCRAC 4 cut(s) 351, 384, 1573, 1953
Mox20I TGGCCA 1 cut(s) 1472
Mph1103I ATGCAT 1 cut(s) 2092
MroXI GAANNNNTTC 1 cut(s) 2106
MscI TGGCCA 1 cut(s) 1472
MseI TTAA 8 cut(s) 24, 419, 705, 819, 837, 1274, 2027, 2126
MslI CAYNNNNRTG 1 cut(s) 200
Msp20I TGGCCA 1 cut(s) 1472
MspA1I CMGCKG 2 cut(s) 86, 2171
MspCI CTTAAG 2 cut(s) 418, 818
MspI CCGG 2 cut(s) 569, 1497
MspR9I CCNGG 6 cut(s) 174, 489, 570, 832, 1027, 1498
MunI CAATTG 1 cut(s) 155
Mva1269I GAATGC 1 cut(s) 2002
MvaI CCWGG 4 cut(s) 174, 489, 832, 1027
MwoI GCNNNNNNNGC 1 cut(s) 1235
NciI CCSGG 2 cut(s) 570, 1498
NheI GCTAGC 1 cut(s) 776
NlaIII CATG 8 cut(s) 54, 205, 546, 1903, 2049, 2120, 2141, 2206
NlaIV GGNNCC 4 cut(s) 436, 561, 1888, 2051
NmuCI GTSAC 2 cut(s) 976, 1067
NsiI ATGCAT 1 cut(s) 2092
NspI RCATGY 3 cut(s) 205, 1903, 2206
PaeR7I CTCGAG 1 cut(s) 1744
PaqCI CACCTGC 1 cut(s) 131
PciI ACATGT 2 cut(s) 1899, 2202
PciSI GCTCTTC 1 cut(s) 1099
PcsI WCGNNNNNNNCGW 1 cut(s) 1659
PctI GAATGC 1 cut(s) 2002
PdmI GAANNNNTTC 1 cut(s) 2106
PfeI GAWTC 8 cut(s) 504, 1186, 1312, 1425, 1830, 1852, 2113, 2162
PflMI CCANNNNNTGG 1 cut(s) 237
PkrI GCNGC 9 cut(s) 85, 1076, 1091, 1171, 1231, 1324, 1580, 1583, 2170
PleI GAGTC 5 cut(s) 83, 331, 436, 786, 1563
PpsI GAGTC 5 cut(s) 83, 331, 436, 786, 1563
PpuMI RGGWCCY 2 cut(s) 1887, 2050
PscI ACATGT 2 cut(s) 1899, 2202
PshAI GACNNNNGTC 1 cut(s) 427
PsiI TTATAA 2 cut(s) 1182, 1440
Psp1406I AACGTT 1 cut(s) 1690
Psp5II RGGWCCY 2 cut(s) 1887, 2050
Psp6I CCWGG 4 cut(s) 172, 487, 830, 1025
PspGI CCWGG 4 cut(s) 172, 487, 830, 1025
PspN4I GGNNCC 4 cut(s) 436, 561, 1888, 2051
PspPI GGNCC 4 cut(s) 1206, 1430, 1887, 2050
PspPPI RGGWCCY 2 cut(s) 1887, 2050
PstI CTGCAG 1 cut(s) 2170
PstNI CAGNNNCTG 1 cut(s) 179
PsuI RGATCY 5 cut(s) 291, 559, 653, 1123, 1768
PvuII CAGCTG 2 cut(s) 86, 2171
RsaI GTAC 7 cut(s) 67, 178, 209, 312, 1619, 1742, 2278
RsaNI GTAC 7 cut(s) 66, 177, 208, 311, 1618, 1741, 2277
RseI CAYNNNNRTG 1 cut(s) 200
SapI GCTCTTC 1 cut(s) 1099
SaqAI TTAA 8 cut(s) 24, 419, 705, 819, 837, 1274, 2027, 2126
SatI GCNGC 9 cut(s) 84, 1075, 1090, 1170, 1230, 1323, 1579, 1582, 2169
Sau96I GGNCC 4 cut(s) 1206, 1430, 1887, 2050
ScaI AGTACT 5 cut(s) 67, 312, 1619, 1742, 2278
SchI GAGTC 5 cut(s) 83, 332, 437, 786, 1563
ScrFI CCNGG 6 cut(s) 174, 489, 570, 832, 1027, 1498
SduI GDGCHC 1 cut(s) 868
SexAI ACCWGGT 2 cut(s) 172, 1025
SfaNI GCATC 6 cut(s) 24, 522, 763, 2077, 2099, 2198
SfcI CTRYAG 5 cut(s) 709, 1078, 1251, 2166, 2283
Sfr274I CTCGAG 1 cut(s) 1744
SinI GGWCC 3 cut(s) 1206, 1887, 2050
SlaI CTCGAG 1 cut(s) 1744
SmiMI CAYNNNNRTG 1 cut(s) 200
SmlI CTYRAG 6 cut(s) 418, 584, 818, 843, 1716, 1744
SmoI CTYRAG 6 cut(s) 418, 584, 818, 843, 1716, 1744
SsiI CCGC 4 cut(s) 1075, 1133, 2238, 2250
SspMI CTAG 3 cut(s) 777, 1412, 2001
StyD4I CCNGG 6 cut(s) 172, 487, 568, 830, 1025, 1496
TaaI ACNGT 5 cut(s) 639, 828, 1153, 1225, 1895
TaiI ACGT 1 cut(s) 1693
TaqI TCGA 6 cut(s) 790, 1630, 1653, 1745, 2176, 2353
TatI WGTACW 5 cut(s) 65, 310, 1617, 1740, 2276
TauI GCSGC 1 cut(s) 1077
TfiI GAWTC 8 cut(s) 504, 1186, 1312, 1425, 1830, 1852, 2113, 2162
Tru1I TTAA 8 cut(s) 24, 419, 705, 819, 837, 1274, 2027, 2126
Tru9I TTAA 8 cut(s) 24, 419, 705, 819, 837, 1274, 2027, 2126
TscAI CASTG 2 cut(s) 981, 1230
TseFI GTSAC 2 cut(s) 976, 1067
TseI GCWGC 8 cut(s) 83, 1089, 1169, 1229, 1322, 1578, 1581, 2168
Tsp45I GTSAC 2 cut(s) 976, 1067
TspGWI ACGGA 1 cut(s) 1219
TspRI CASTG 2 cut(s) 981, 1230
Van91I CCANNNNNTGG 1 cut(s) 237
Vha464I CTTAAG 2 cut(s) 418, 818
VpaK11BI GGWCC 3 cut(s) 1206, 1887, 2050
XapI RAATTY 2 cut(s) 550, 1643
XceI RCATGY 3 cut(s) 205, 1903, 2206
XcmI CCANNNNNNNNNTGG 2 cut(s) 113, 238
XhoI CTCGAG 1 cut(s) 1744
XmiI GTMKAC 3 cut(s) 344, 591, 1155
XmnI GAANNNNTTC 1 cut(s) 2106
XspI CTAG 3 cut(s) 777, 1412, 2001
ZrmI AGTACT 5 cut(s) 67, 312, 1619, 1742, 2278
Zsp2I ATGCAT 1 cut(s) 2092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.