Rmu_sc0012550.1_g000008

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012550.1
OG0000564
Physical Location & Seq
Forward (+)
14997 .. 18182
3186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012550.1_g000008.1.cds

Sequence Viewer

Length: 2490 bp
atggataccaaaaccaacctaatgaagtccatggtttctgttcttttgttatgcctatctctcaaaactcatatctctcttgccgctgacaccatcactgtaaaccaatctctctctggtgatcaaaccattgtttcagcaggtggagtttttgaactgggtttcttcaatccaggtaactcaaagtactatataggcatttggtacaggagaagtccaagaaacgttgtctgggtggcgaatagggagcaaccaggcgccgacacgtcatcagaattgaggatctcagatggtaatttggttctgtttagtgagtccaaaagtccaatttggtccacaaatgtctccacatcaggtacatctgttcacgcagttctttttgataacgggaaccttgttttaagagctgggaattcatcccagcctttatggcagagttttgatcacccaactgacactttgctagcagaaggtagaattgggttcagttctattactaaacaaaaacaaagtttgacttcatggaagagtttagaggatcctgcaccaggtctctattctattgagctagacccaaatgaaaccagctcatacattgtgttgtggaatgggtctagacagtattggaccagtggaccatgggatgtaaagactcggagattcagtttgattcctgagatgaggcttaattacatcttcaatttcagctatgtgacaaacaaaaacgaaagctatttcacctattctctttatgatcctacaatcttgtctagatgtctgatcgatgtctcggggcaagttaagcaactgtcatggttgagaccttccatagactggaaattgttttggtctcaaccaagacaacaatgcaaagtctatgccttttgtggggcttttggcaattgcaatgagaagtcctcacccttctgtaattgtttgaatggttttgagccgaaatcgaaggtggattgggatttgcaggattattctggtgggtgttcaagaagaactgatctgtattctgggaatgctactagtgataatgcggaaaaagaccgatttctagacatgcctagcatgtcattacctgaaaatcaagagtctgtagatgctgcgagtattgttcaatgtgaatcaatctgcttaaataaccaatcttgcactgcttatgcttatgacagcaatggatgccgaatttggattggagatctcttcaatctggaacaactcacgggagatgacagtaatggaacaacattgtacctcagacttgcagcttccgagtttaagaattttaagagtgccaagagtcatgctaataagcggtcccttataattgcaacagtctcagcaacagccggattgcttatagtaattgttggctgcatcttttggaagaaaactttgggaaagagaagggggcgtagaaggaagtacgatgagactataagtaatgttggtgcaaagaatgatgcagaactaccagtctatagtttaaagagcatattagttgctacaaacaacttctctgaaactaataaactgggagagggaggatttggccctgtttataagggtattttaactgtaagtcaagaagtagccataaaaaggctatcaaagaagtctgggcaaggacatcaggagttcatgaatgagttgaaactcatagccaagctccaacacaccaatcttgttaggctcttgggttgctgtattgaagagggggaaatgatactgatctatgagtacatgcctaatcgaagtctggacaaattcttgtttgatgcatctgaaaacacaaaattggattgggataaacgctttcaaattatagagggtgttgctcaaggagttctatatatccacaagtactctagactgaaaataattcatagggacttaaaaacaagtaatgttctgttggataacacaatgaagcccagaatttcagactttggaatggcaagaattttcggaataaatcaaactgaagcaaataccaacagggttgttgggacatatggatacatggcaccagaatatggactttatggtcaattttctgagaagtcagatgtatttagctatggggtgttgttgctagagattgtgagcggaaagaggagtggtagtttttaccatgttgaacaagtagtcactcttgctggatgggcatgggaattatggaaagaaggtaaaggaatggaggtgattgatgcatccataagggaaacatgtcggcctcatgaagctttaaggtgtatctctgttggtttcttgtgtcttcaacaatctcctgctgatcgaccgactatgtcttcggtaattcatatgctgcaagccagtgatgcaacatcactcccaccctccaaagaacctgctttttctactgatattaggaatgctagtgcccgtggttcttcctctgaaacatctaccagattttccaacaatgaagtcaccattagcttgccagaagctcggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

829

Amino Acids

92.73

Weight (kDa)

8.13

Isoelectric Point (pI)

43.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1334, 1572
AarI CACCTGC 1 cut(s) 131
AasI GACNNNNNNGTC 1 cut(s) 2055
Acc36I ACCTGC 2 cut(s) 131, 2389
AccB1I GGYRCC 2 cut(s) 257, 2035
AccB7I CCANNNNNTGG 2 cut(s) 834, 2045
AccBSI CCGCTC 1 cut(s) 2118
AciI CCGC 4 cut(s) 84, 1046, 1324, 2118
AclI AACGTT 1 cut(s) 225
AclWI GGATC 4 cut(s) 290, 533, 546, 749
AcsI RAATTY 6 cut(s) 412, 1194, 1291, 1775, 1947, 1971
AcuI CTGAAG 1 cut(s) 2013
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 7 cut(s) 188, 206, 358, 1262, 1436, 1751, 1874
AfiI CCNNNNNNNGG 5 cut(s) 548, 834, 888, 1611, 2045
AflIII ACRYGT 2 cut(s) 264, 2237
AhlI ACTAGT 1 cut(s) 1034
AjiI CACGTC 1 cut(s) 267
AjnI CCWGG 3 cut(s) 172, 253, 547
AjuI GAANNNNNNNTTGG 4 cut(s) 462, 494, 1388, 1420
Alw26I GTCTC 7 cut(s) 349, 557, 793, 814, 855, 1351, 1436
AlwI GGATC 4 cut(s) 290, 533, 546, 749
Ama87I CYCGRG 1 cut(s) 790
AoxI GGCC 2 cut(s) 1561, 2243
ApeKI GCWGC 4 cut(s) 1112, 1274, 1383, 2338
ApoI RAATTY 6 cut(s) 412, 1194, 1291, 1775, 1947, 1971
ArsI GACNNNNNNTTYG 2 cut(s) 2305, 2337
AspLEI GCGC 1 cut(s) 260
AspS9I GGNCC 5 cut(s) 333, 627, 635, 1326, 1562
AsuHPI GGTGA 6 cut(s) 131, 437, 730, 912, 2224, 2455
AsuNHI GCTAGC 1 cut(s) 463
AvaI CYCGRG 1 cut(s) 790
AvaII GGWCC 4 cut(s) 333, 627, 635, 1326
BaeGI GKGCMC 1 cut(s) 2416
BaeI ACNNNNGTAYC 2 cut(s) 348, 381
BamHI GGATCC 1 cut(s) 538
BanI GGYRCC 2 cut(s) 257, 2035
BbsI GAAGAC 2 cut(s) 2279, 2313
BbvI GCAGC 4 cut(s) 1099, 1286, 1370, 2325
BccI CCATC 3 cut(s) 101, 284, 2166
BciT130I CCWGG 3 cut(s) 174, 255, 549
BciVI GTATCC 1 cut(s) 2021
BclI TGATCA 2 cut(s) 121, 442
BcoDI GTCTC 7 cut(s) 349, 557, 793, 814, 855, 1351, 1436
BcuI ACTAGT 1 cut(s) 1034
BfmI CTRYAG 2 cut(s) 1104, 1489
BfoI RGCGCY 1 cut(s) 261
BfuAI ACCTGC 2 cut(s) 131, 2389
BfuI GTATCC 1 cut(s) 2021
BglI GCCNNNNNGGC 1 cut(s) 430
BglII AGATCT 1 cut(s) 1207
BisI GCNGC 5 cut(s) 84, 1113, 1275, 1384, 2339
BlsI GCNGC 5 cut(s) 85, 1114, 1276, 1385, 2340
BmcAI AGTACT 2 cut(s) 188, 1874
Bme1390I CCNGG 3 cut(s) 174, 255, 549
Bme18I GGWCC 4 cut(s) 333, 627, 635, 1326
BmeT110I CYCGRG 1 cut(s) 790
BmgBI CACGTC 1 cut(s) 267
BmgT120I GGNCC 5 cut(s) 333, 627, 635, 1326, 1562
BmiI GGNNCC 5 cut(s) 259, 392, 540, 1328, 2037
BmrFI CCNGG 3 cut(s) 174, 255, 549
BmrI ACTGGG 2 cut(s) 167, 1553
BmsI GCATC 9 cut(s) 1099, 1178, 1395, 1462, 1777, 1799, 2209, 2231, 2341
BmtI GCTAGC 1 cut(s) 467
BmuI ACTGGG 2 cut(s) 167, 1553
BpiI GAAGAC 2 cut(s) 2279, 2313
BplI GAGNNNNNCTC 2 cut(s) 902, 934
BpuEI CTTGAG 1 cut(s) 1833
Bsa29I ATCGAT 1 cut(s) 783
BsaBI GATNNNNATC 1 cut(s) 1739
BsaHI GRCGYC 1 cut(s) 258
BsaI GGTCTC 3 cut(s) 557, 814, 855
BsaJI CCNNGG 3 cut(s) 30, 638, 2416
BsaXI ACNNNNNCTCC 4 cut(s) 649, 679, 2119, 2149
Bsc4I CCNNNNNNNGG 5 cut(s) 548, 834, 888, 1611, 2045
Bse1I ACTGG 6 cut(s) 162, 630, 839, 1484, 1548, 2346
Bse3DI GCAATG 2 cut(s) 913, 1189
Bse8I GATNNNNATC 1 cut(s) 1739
BseBI CCWGG 3 cut(s) 174, 255, 549
BseCI ATCGAT 1 cut(s) 783
BseDI CCNNGG 3 cut(s) 30, 638, 2416
BseGI GGATG 5 cut(s) 416, 649, 1193, 2177, 2222
BseJI GATNNNNATC 1 cut(s) 1739
BseLI CCNNNNNNNGG 5 cut(s) 548, 834, 888, 1611, 2045
BseMI GCAATG 2 cut(s) 913, 1189
BseMII CTCAG 5 cut(s) 300, 666, 1279, 1362, 2058
BseNI ACTGG 6 cut(s) 162, 630, 839, 1484, 1548, 2346
BseRI GAGGAG 1 cut(s) 2140
BseSI GKGCMC 1 cut(s) 2416
BseXI GCAGC 4 cut(s) 1099, 1286, 1370, 2325
BseYI CCCAGC 2 cut(s) 407, 420
BsgI GTGCAG 1 cut(s) 528
Bsh1285I CGRYCG 1 cut(s) 2312
BshFI GGCC 2 cut(s) 1563, 2245
BshNI GGYRCC 2 cut(s) 257, 2035
BshVI ATCGAT 1 cut(s) 783
BsiEI CGRYCG 1 cut(s) 2312
BsiHKCI CYCGRG 1 cut(s) 790
BsiSI CCGG 1 cut(s) 1359
BslFI GGGAC 3 cut(s) 1312, 1913, 2032
BslI CCNNNNNNNGG 5 cut(s) 548, 834, 888, 1611, 2045
BsmAI GTCTC 7 cut(s) 349, 557, 793, 814, 855, 1351, 1436
BsmFI GGGAC 3 cut(s) 1312, 1913, 2032
BsmI GAATGC 2 cut(s) 1033, 2410
BsnI GGCC 2 cut(s) 1563, 2245
Bso31I GGTCTC 3 cut(s) 557, 814, 855
BsoBI CYCGRG 1 cut(s) 790
Bsp1286I GDGCHC 1 cut(s) 2416
Bsp19I CCATGG 2 cut(s) 30, 638
BspACI CCGC 4 cut(s) 84, 1046, 1324, 2118
BspANI GGCC 2 cut(s) 1563, 2245
BspCNI CTCAG 5 cut(s) 299, 667, 1278, 1361, 2059
BspDI ATCGAT 1 cut(s) 783
BspHI TCATGA 2 cut(s) 1650, 2248
BspLI GGNNCC 5 cut(s) 259, 392, 540, 1328, 2037
BspMI ACCTGC 2 cut(s) 131, 2389
BspOI GCTAGC 1 cut(s) 467
BspPI GGATC 4 cut(s) 290, 533, 546, 749
BspT107I GGYRCC 2 cut(s) 257, 2035
BspTNI GGTCTC 3 cut(s) 557, 814, 855
BsrBI CCGCTC 1 cut(s) 2118
BsrDI GCAATG 2 cut(s) 913, 1189
BsrI ACTGG 6 cut(s) 162, 630, 839, 1484, 1548, 2346
BssECI CCNNGG 3 cut(s) 30, 638, 2416
BssNI GRCGYC 1 cut(s) 258
BssT1I CCWWGG 2 cut(s) 30, 638
Bst2UI CCWGG 3 cut(s) 174, 255, 549
Bst4CI ACNGT 6 cut(s) 100, 621, 810, 1244, 1345, 1588
Bst6I CTCTTC 3 cut(s) 521, 1217, 1716
BstACI GRCGYC 1 cut(s) 258
BstAPI GCANNNNNTGC 1 cut(s) 1188
BstC8I GCNNGC 3 cut(s) 465, 2343, 2474
BstDEI CTNAG 5 cut(s) 286, 675, 1265, 1348, 2067
BstDSI CCRYGG 3 cut(s) 30, 638, 2416
BstENI CCTNNNNNAGG 1 cut(s) 546
BstF5I GGATG 5 cut(s) 416, 649, 1193, 2177, 2222
BstH2I RGCGCY 1 cut(s) 261
BstHHI GCGC 1 cut(s) 260
BstMAI GTCTC 7 cut(s) 349, 557, 793, 814, 855, 1351, 1436
BstMCI CGRYCG 1 cut(s) 2312
BstMWI GCNNNNNNNGC 5 cut(s) 430, 802, 1188, 2174, 2351
BstNI CCWGG 3 cut(s) 174, 255, 549
BstNSI RCATGY 4 cut(s) 1072, 1081, 1756, 2241
BstSCI CCNGG 3 cut(s) 172, 253, 547
BstSFI CTRYAG 2 cut(s) 1104, 1489
BstSLI GKGCMC 1 cut(s) 2416
BstV1I GCAGC 4 cut(s) 1099, 1286, 1370, 2325
BstV2I GAAGAC 2 cut(s) 2279, 2313
BstX2I RGATCY 3 cut(s) 282, 538, 1207
BstYI RGATCY 3 cut(s) 282, 538, 1207
Bsu15I ATCGAT 1 cut(s) 783
BsuI GTATCC 1 cut(s) 2021
BsuRI GGCC 2 cut(s) 1563, 2245
BsuTUI ATCGAT 1 cut(s) 783
BtgI CCRYGG 3 cut(s) 30, 638, 2416
BtrI CACGTC 1 cut(s) 267
BtsCI GGATG 5 cut(s) 416, 649, 1193, 2177, 2222
BtsI GCAGTG 1 cut(s) 1161
BtsIMutI CAGTG 4 cut(s) 96, 637, 1161, 2353
BveI ACCTGC 2 cut(s) 131, 2389
Cac8I GCNNGC 3 cut(s) 465, 2343, 2474
CciI TCATGA 2 cut(s) 1650, 2248
CfoI GCGC 1 cut(s) 260
Cfr13I GGNCC 5 cut(s) 333, 627, 635, 1326, 1562
ClaI ATCGAT 1 cut(s) 783
CsiI ACCWGGT 1 cut(s) 547
Csp6I GTAC 7 cut(s) 187, 205, 357, 1261, 1435, 1750, 1873
CviQI GTAC 7 cut(s) 187, 205, 357, 1261, 1435, 1750, 1873
DdeI CTNAG 5 cut(s) 286, 675, 1265, 1348, 2067
DinI GGCGCC 1 cut(s) 259
DraI TTTAAA 1 cut(s) 1497
DrdI GACNNNNNNGTC 1 cut(s) 2055
DseDI GACNNNNNNGTC 1 cut(s) 2055
Eam1104I CTCTTC 3 cut(s) 521, 1217, 1716
EarI CTCTTC 3 cut(s) 521, 1217, 1716
Eco130I CCWWGG 2 cut(s) 30, 638
Eco31I GGTCTC 3 cut(s) 557, 814, 855
Eco47I GGWCC 4 cut(s) 333, 627, 635, 1326
Eco57I CTGAAG 1 cut(s) 2013
Eco88I CYCGRG 1 cut(s) 790
EcoNI CCTNNNNNAGG 1 cut(s) 546
EcoRI GAATTC 1 cut(s) 412
EcoRII CCWGG 3 cut(s) 172, 253, 547
EcoT14I CCWWGG 2 cut(s) 30, 638
EcoT22I ATGCAT 2 cut(s) 1792, 2224
EgeI GGCGCC 1 cut(s) 259
EheI GGCGCC 1 cut(s) 259
ErhI CCWWGG 2 cut(s) 30, 638
FalI AAGNNNNNCTT 2 cut(s) 502, 534
FaqI GGGAC 3 cut(s) 1312, 1913, 2032
FauNDI CATATG 2 cut(s) 2023, 2334
FbaI TGATCA 2 cut(s) 121, 442
Fnu4HI GCNGC 5 cut(s) 84, 1113, 1275, 1384, 2339
FokI GGATG 5 cut(s) 403, 656, 1200, 2184, 2209
Fsp4HI GCNGC 5 cut(s) 84, 1113, 1275, 1384, 2339
GlaI GCGC 1 cut(s) 259
GluI GCNGC 5 cut(s) 84, 1113, 1275, 1384, 2339
GsaI CCCAGC 2 cut(s) 411, 424
HaeII RGCGCY 1 cut(s) 261
HaeIII GGCC 2 cut(s) 1563, 2245
HapII CCGG 1 cut(s) 1359
HhaI GCGC 1 cut(s) 260
Hin1I GRCGYC 1 cut(s) 258
Hin6I GCGC 1 cut(s) 258
HinP1I GCGC 1 cut(s) 258
HindIII AAGCTT 1 cut(s) 2253
HinfI GANTC 7 cut(s) 314, 652, 660, 670, 1100, 1133, 1309
HpaII CCGG 1 cut(s) 1359
HphI GGTGA 6 cut(s) 131, 437, 730, 912, 2224, 2455
Hpy166II GTNNAC 4 cut(s) 103, 336, 367, 635
Hpy8I GTNNAC 4 cut(s) 103, 336, 367, 635
HpyAV CCTTC 7 cut(s) 464, 834, 934, 955, 1410, 1422, 2189
HpyCH4III ACNGT 6 cut(s) 100, 621, 810, 1244, 1345, 1588
HpyCH4IV ACGT 2 cut(s) 225, 266
HpyF10VI GCNNNNNNNGC 5 cut(s) 430, 802, 1188, 2174, 2351
HpyF3I CTNAG 5 cut(s) 286, 675, 1265, 1348, 2067
HpySE526I ACGT 2 cut(s) 225, 266
Hsp92I GRCGYC 1 cut(s) 258
HspAI GCGC 1 cut(s) 258
KasI GGCGCC 1 cut(s) 257
Ksp22I TGATCA 2 cut(s) 121, 442
LmnI GCTCC 2 cut(s) 247, 1683
Lsp1109I GCAGC 4 cut(s) 1099, 1286, 1370, 2325
LweI GCATC 9 cut(s) 1099, 1178, 1395, 1462, 1777, 1799, 2209, 2231, 2341
MabI ACCWGGT 1 cut(s) 547
MaeII ACGT 2 cut(s) 225, 266
MaeIII GTNAC 4 cut(s) 176, 712, 2158, 2461
MbiI CCGCTC 1 cut(s) 2118
MfeI CAATTG 1 cut(s) 901
MflI RGATCY 3 cut(s) 282, 538, 1207
MhlI GDGCHC 1 cut(s) 2416
Mly113I GGCGCC 1 cut(s) 258
MlyI GAGTC 4 cut(s) 323, 646, 1109, 1318
MmeI TCCRAC 3 cut(s) 1705, 1905, 2475
Mph1103I ATGCAT 2 cut(s) 1792, 2224
MspA1I CMGCKG 1 cut(s) 86
MspI CCGG 1 cut(s) 1359
MspR9I CCNGG 3 cut(s) 174, 255, 549
MunI CAATTG 1 cut(s) 901
Mva1269I GAATGC 2 cut(s) 1033, 2410
MvaI CCWGG 3 cut(s) 174, 255, 549
MwoI GCNNNNNNNGC 5 cut(s) 430, 802, 1188, 2174, 2351
NarI GGCGCC 1 cut(s) 258
NcoI CCATGG 2 cut(s) 30, 638
NdeI CATATG 2 cut(s) 2023, 2334
NheI GCTAGC 1 cut(s) 463
NlaIV GGNNCC 5 cut(s) 259, 392, 540, 1328, 2037
NmuCI GTSAC 3 cut(s) 712, 2158, 2461
NsiI ATGCAT 2 cut(s) 1792, 2224
NspI RCATGY 4 cut(s) 1072, 1081, 1756, 2241
PagI TCATGA 2 cut(s) 1650, 2248
PaqCI CACCTGC 1 cut(s) 131
PciI ACATGT 1 cut(s) 2237
PctI GAATGC 2 cut(s) 1033, 2410
PfeI GAWTC 3 cut(s) 660, 670, 1133
PflFI GACNNNGTC 1 cut(s) 2317
PflMI CCANNNNNTGG 2 cut(s) 834, 2045
PkrI GCNGC 5 cut(s) 85, 1114, 1276, 1385, 2340
PleI GAGTC 4 cut(s) 322, 646, 1108, 1317
PluTI GGCGCC 1 cut(s) 261
PpsI GAGTC 4 cut(s) 322, 646, 1108, 1317
PscI ACATGT 1 cut(s) 2237
PsiI TTATAA 2 cut(s) 1334, 1572
Psp1406I AACGTT 1 cut(s) 225
Psp6I CCWGG 3 cut(s) 172, 253, 547
PspFI CCCAGC 2 cut(s) 407, 420
PspGI CCWGG 3 cut(s) 172, 253, 547
PspN4I GGNNCC 5 cut(s) 259, 392, 540, 1328, 2037
PspPI GGNCC 5 cut(s) 333, 627, 635, 1326, 1562
PsuI RGATCY 3 cut(s) 282, 538, 1207
PsyI GACNNNGTC 1 cut(s) 2317
RsaI GTAC 7 cut(s) 188, 206, 358, 1262, 1436, 1751, 1874
RsaNI GTAC 7 cut(s) 187, 205, 357, 1261, 1435, 1750, 1873
SatI GCNGC 5 cut(s) 84, 1113, 1275, 1384, 2339
Sau96I GGNCC 5 cut(s) 333, 627, 635, 1326, 1562
ScaI AGTACT 2 cut(s) 188, 1874
SchI GAGTC 4 cut(s) 323, 646, 1109, 1318
ScrFI CCNGG 3 cut(s) 174, 255, 549
SduI GDGCHC 1 cut(s) 2416
SexAI ACCWGGT 1 cut(s) 547
SfaNI GCATC 9 cut(s) 1099, 1178, 1395, 1462, 1777, 1799, 2209, 2231, 2341
SfcI CTRYAG 2 cut(s) 1104, 1489
SfoI GGCGCC 1 cut(s) 259
SinI GGWCC 4 cut(s) 333, 627, 635, 1326
SmlI CTYRAG 1 cut(s) 1848
SmoI CTYRAG 1 cut(s) 1848
SpeI ACTAGT 1 cut(s) 1034
SsiI CCGC 4 cut(s) 84, 1046, 1324, 2118
SspDI GGCGCC 1 cut(s) 257
StyD4I CCNGG 3 cut(s) 172, 253, 547
StyI CCWWGG 2 cut(s) 30, 638
TaaI ACNGT 6 cut(s) 100, 621, 810, 1244, 1345, 1588
TaiI ACGT 2 cut(s) 228, 269
TaqI TCGA 4 cut(s) 783, 959, 1762, 2308
TaqII GACCGA 2 cut(s) 1071, 2326
TatI WGTACW 3 cut(s) 186, 1749, 1872
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 3 cut(s) 660, 670, 1133
TscAI CASTG 4 cut(s) 103, 637, 1168, 2353
TseFI GTSAC 3 cut(s) 712, 2158, 2461
TseI GCWGC 4 cut(s) 1112, 1274, 1383, 2338
Tsp45I GTSAC 3 cut(s) 712, 2158, 2461
TspRI CASTG 4 cut(s) 103, 637, 1168, 2353
Tth111I GACNNNGTC 1 cut(s) 2317
Van91I CCANNNNNTGG 2 cut(s) 834, 2045
VpaK11BI GGWCC 4 cut(s) 333, 627, 635, 1326
XagI CCTNNNNNAGG 1 cut(s) 546
XapI RAATTY 6 cut(s) 412, 1194, 1291, 1775, 1947, 1971
XbaI TCTAGA 4 cut(s) 614, 770, 1063, 1877
XceI RCATGY 4 cut(s) 1072, 1081, 1756, 2241
XcmI CCANNNNNNNNNTGG 1 cut(s) 113
ZrmI AGTACT 2 cut(s) 188, 1874
Zsp2I ATGCAT 2 cut(s) 1792, 2224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.