RchiOBHm_Chr4g0405661

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000564
Physical Location & Seq
Forward (+)
26344663 .. 26348024
3362 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37713

Sequence Viewer

Length: 2562 bp
ATGGATACCAAAACCAGCCCGACTAAGTTCATGATTTTCCTTCTCTTCTCATACCTACATCTGAAGACTCATGTCTCCCTCGCAACCGATGCCATCACCGCAGACCAATCTTTCTCCGGTGACGAAACCATTGTCTCCTCAGGTGGTGTTTTTGAACTCGGTTTCTTCAAACCAGGTAAACTTCCAAACTACTACGTAGGCATGTGGTACTACAAGCGAGTAGTAACTGTGAAAACCATAGTCTGGGTGGCAAATAGAAAACAACCAGTCTCCGATAGATTTACTTCGGTGTTGAGGATCATAGATAGTAATTTAGTTCTCGTTGATGAGACCAAAAGTCTTGTTTGGTCCACAAATGTGACCTCCACCACCACGTCAGGCTCAGCTACTTCTATACAAGCAGTTCTTTTAGACAATGGCAACCTTGTCTTAAGAGTTGGATCCAATTCATCATTACTGCCGTTATGGCAAAGTTTTGACCATCCAGCTCATACTTGGCTAGCAGGAAGTAAAATTGGATTCAACAATGTTACCAAACAAACCCAAAAACTCACTTCATGGAAGAACTCCGAGGATCCTGCACCGGGTCTTTACTCTCTTGAGCTGGACCCGAATGGTAGCAACTCATATATCCTACTGTGGAATAGTTCTAGACAGTACTGGACCAGTGGATCTTGGGACGAGCATAATCGAATTTTCAGCTTGATTCCTGAAATGAGGCTTAACTATATCTACAATTGCAGCTATGTTACGAACGAAAACGAAAGCTATTTCACCTATGCTCTTAATGATCCTAAAAAAATATCTCAGGCAGTTATGCATTTCTCGGGGCAGATCCAGCAACTGACATGGTCGGAGACTTCCAAGCAGTGGATTTTGTTTTGGTCCCAACCAAGAAAACAATGTGAAGTTTATGGTTTGTGCGGGGCATTCAGCACTTGCAATGCCACGTCTTTGCCCTCATGTAGCTGTTTGAAGGGTTTTGAGCCAAAACTGCTGGGTGATTGGAACTTAAATGATCATGCTGGCGGGTGTTCAAGAATAACCGGTCTTCAGTGTGGAAATGCTACTAGTCTTAATGGGACACAAGTCACACAAGACCAGTTTCAAGAAATGACTAGAATGACATTGTCTGAAAATGATCAATATGCAGAGGTCGGGAGTATTATGGAATGTGAATCCATCTGCTTAAATCACTGCTCATGCACTGCTTATTCATATGAAAGTGGTGGATGTTCAATTTGGAATGGAGATCTCTTGCATCTGCAACAGCTTGAAGCAAGTGATACTAATGGAAGAACAATGTACATCAGACTTGCGGCTTCCGAGTTCGAGAATCCTCCTAAAAGTAGTAATAAGGGTAGTGAGGGTCATACTGATGATAAGTGGTCTCTTGTAATTGCAATAATCTCAGCAACAGCAGGATTCCTTACAATAATTTTTGGCTATTTTTTATGGAAGAAAACTTTGGGAAAGAGAAGAGAGCATAGGAGGAGGACTATCAATTCAAGTAATCTGGGTGCTAGAGATGGAAACGATGATACAGAACTACCACTCATTGGTTTGAAGAGTATATTAGCTGCTACAAACAACTTCTCTGAAGCTAATAAACTTGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGGATTTTTCCTGACAATCAAGAAGTAGCAATAAAACGGCTTTCTACGAAGTCTGGGCAAGGACATCAAGAGTTCGTGAATGAGTTAAAGCTTATAGCCAAGCTTCAGCATAGAAATCTTGTTCGACTCTTGGGTTGCTGTAATGAAGAGGAGGAAATGATACTGATTTATGAGTACATGCCCAACCGAAGTTTGGATAAATTCTTATTTGATCCATCTGAACAGACAAAATTGGACTGGGATAGACGTTTTAGGATTATAGAAGGTATTGCTCAGGGAGTACTCTATATCCACAAGTACTCCAGACTGAAAATCATTCATAGAGACTTAAAAGCAAGTAATATTCTGTTGGATGGAGCAATGAACCCCAGAGTATCAGACTTCGGAATGGCCAAGATTTTTGAGTTAAACCAAATTGAAGCAAATACAAACAGGGTTGTTGGGACATATGGCTACATGTCACCTGAGTATGCACGTTATGGTCATTTCTCTGAAAAATTGGACGTATTTAGCTTTGGAGTGTTATTGTTGGAGATTGTAACCGGAAAGAAAAATGGTGCTTTCTATCATTTCGAGCATTCACTGACTCTTGCCGGATGGGCATGGAAATTATGGAAAGAAAACAGAGGAATGGAGGTGATTGATGCATCGGTACGGGAAACATGCCGGCCTCATGAAGCTTTAAGGTGTATCCATGTAGGGTTTTTGTGCGTACAAGAAGCTCCAGCTGATCGACCAACAATGTCTGCTGTAATTCATATGCTGCAAAGCAACGAAGCCACATCACTTCCACACTCCAAAGAACCTGCTTTTTCAATACACGATATGAATTCCAATGTTGCTGAATCTTCTTCTCAAACGTCTACTAGTGCTTGTTCCAAGAATGCATTCACAATTAGTTTGCCAGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

853

Amino Acids

95.8

Weight (kDa)

6.55

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 188 5.1e-29 D-mannose binding lectin
S_locus_glycop PF00954 221 - 331 6.9e-30 S-locus glycoprotein domain
PAN_2 PF08276 365 - 420 5.2e-13 PAN-like domain
Pkinase PF00069 533 - 732 2.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 535 - 803 1.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1641
Acc36I ACCTGC 1 cut(s) 2458
AccB7I CCANNNNNTGG 3 cut(s) 243, 870, 1559
AccI GTMKAC 1 cut(s) 2507
AciI CCGC 4 cut(s) 99, 924, 1029, 1319
AclWI GGATC 9 cut(s) 305, 435, 448, 569, 582, 679, 785, 829, 1850
AcoI YGGCCR 1 cut(s) 2034
AcsI RAATTY 3 cut(s) 693, 1844, 2473
AcuI CTGAAG 4 cut(s) 83, 1037, 1620, 1733
AfaI GTAC 8 cut(s) 209, 659, 1307, 1820, 1926, 1943, 2298, 2358
AfiI CCNNNNNNNGG 5 cut(s) 243, 584, 870, 1559, 1837
AflII CTTAAG 1 cut(s) 430
AflIII ACRYGT 1 cut(s) 2100
AgeI ACCGGT 1 cut(s) 1046
AhdI GACNNNNNGTC 1 cut(s) 336
AhlI ACTAGT 2 cut(s) 1070, 2510
AjiI CACGTC 2 cut(s) 375, 951
AjnI CCWGG 1 cut(s) 172
AjuI GAANNNNNNNTTGG 4 cut(s) 1451, 1483, 2516, 2548
AleI CACNNNNGTG 1 cut(s) 356
Alw26I GTCTC 7 cut(s) 79, 139, 274, 323, 851, 1395, 1962
AlwI GGATC 9 cut(s) 305, 435, 448, 569, 582, 679, 785, 829, 1850
AlwNI CAGNNNCTG 1 cut(s) 844
Ama87I CYCGRG 1 cut(s) 826
AoxI GGCC 3 cut(s) 1630, 2034, 2312
ApeKI GCWGC 3 cut(s) 741, 1580, 2407
ApoI RAATTY 3 cut(s) 693, 1844, 2473
ArsI GACNNNNNNTTYG 2 cut(s) 117, 149
AsiGI ACCGGT 1 cut(s) 1046
Asp700I GAANNNNTTC 1 cut(s) 2531
AspS9I GGNCC 5 cut(s) 348, 607, 663, 885, 1631
AsuC2I CCSGG 1 cut(s) 585
AsuHPI GGTGA 6 cut(s) 88, 131, 766, 1013, 2097, 2293
AsuNHI GCTAGC 1 cut(s) 499
AvaI CYCGRG 1 cut(s) 826
AvaII GGWCC 4 cut(s) 348, 607, 663, 885
AxyI CCTNAGG 1 cut(s) 139
BalI TGGCCA 1 cut(s) 2036
BamHI GGATCC 2 cut(s) 440, 574
BbsI GAAGAC 2 cut(s) 71, 1043
BbvI GCAGC 3 cut(s) 753, 1567, 2394
BccI CCATC 7 cut(s) 101, 489, 1190, 1523, 1867, 1991, 2235
BceAI ACGGC 2 cut(s) 445, 1697
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 1 cut(s) 174
BciVI GTATCC 1 cut(s) 2345
BclI TGATCA 2 cut(s) 1018, 1141
BcnI CCSGG 1 cut(s) 585
BcoDI GTCTC 7 cut(s) 79, 139, 274, 323, 851, 1395, 1962
BcuI ACTAGT 2 cut(s) 1070, 2510
BfaI CTAG 6 cut(s) 500, 651, 1071, 1119, 1524, 2511
BfrI CTTAAG 1 cut(s) 430
BfuAI ACCTGC 1 cut(s) 2458
BfuI GTATCC 1 cut(s) 2345
BglI GCCNNNNNGGC 2 cut(s) 466, 2243
BglII AGATCT 1 cut(s) 1252
BisI GCNGC 4 cut(s) 742, 1320, 1581, 2408
BlpI GCTNAGC 1 cut(s) 382
BlsI GCNGC 4 cut(s) 743, 1321, 1582, 2409
BmcAI AGTACT 3 cut(s) 659, 1926, 1943
Bme1390I CCNGG 2 cut(s) 174, 585
Bme18I GGWCC 4 cut(s) 348, 607, 663, 885
BmeRI GACNNNNNGTC 1 cut(s) 336
BmeT110I CYCGRG 1 cut(s) 826
BmgBI CACGTC 2 cut(s) 375, 951
BmgT120I GGNCC 5 cut(s) 348, 607, 663, 885, 1631
BmiI GGNNCC 4 cut(s) 442, 576, 609, 887
BmrFI CCNGG 2 cut(s) 174, 585
BmrI ACTGGG 1 cut(s) 1891
BmsI GCATC 4 cut(s) 79, 1270, 2278, 2300
BmtI GCTAGC 1 cut(s) 503
BmuI ACTGGG 1 cut(s) 1891
BoxI GACNNNNGTC 2 cut(s) 71, 1088
BpiI GAAGAC 2 cut(s) 71, 1043
BpmI CTGGAG 2 cut(s) 1930, 2352
Bpu10I CCTNAGC 1 cut(s) 1917
Bpu1102I GCTNAGC 1 cut(s) 382
BpuEI CTTGAG 1 cut(s) 620
BpuMI CCSGG 1 cut(s) 585
BsaAI YACGTR 1 cut(s) 196
BsaI GGTCTC 2 cut(s) 323, 1395
BsaJI CCNNGG 1 cut(s) 570
BsaWI WCCGGW 3 cut(s) 116, 1046, 2186
BsaXI ACNNNNNCTCC 2 cut(s) 1928, 1958
Bsc4I CCNNNNNNNGG 5 cut(s) 243, 584, 870, 1559, 1837
Bse118I RCCGGY 2 cut(s) 1046, 2310
Bse1I ACTGG 5 cut(s) 266, 665, 666, 1102, 1886
Bse21I CCTNAGG 1 cut(s) 139
Bse3DI GCAATG 2 cut(s) 949, 2010
BseBI CCWGG 1 cut(s) 174
BseDI CCNNGG 1 cut(s) 570
BseGI GGATG 4 cut(s) 481, 1238, 2002, 2246
BseLI CCNNNNNNNGG 5 cut(s) 243, 584, 870, 1559, 1837
BseMI GCAATG 2 cut(s) 949, 2010
BseMII CTCAG 6 cut(s) 153, 396, 821, 1425, 1931, 2100
BseNI ACTGG 5 cut(s) 266, 665, 666, 1102, 1886
BseRI GAGGAG 3 cut(s) 127, 1507, 1808
BseXI GCAGC 3 cut(s) 753, 1567, 2394
BseYI CCCAGC 1 cut(s) 997
BsgI GTGCAG 1 cut(s) 564
BshFI GGCC 3 cut(s) 1632, 2036, 2314
BshTI ACCGGT 1 cut(s) 1046
BsiHKCI CYCGRG 1 cut(s) 826
BsiSI CCGG 6 cut(s) 117, 584, 1047, 2187, 2238, 2311
BslFI GGGAC 4 cut(s) 692, 871, 1096, 2101
BslI CCNNNNNNNGG 5 cut(s) 243, 584, 870, 1559, 1837
BsmAI GTCTC 7 cut(s) 79, 139, 274, 323, 851, 1395, 1962
BsmFI GGGAC 4 cut(s) 692, 871, 1096, 2101
BsmI GAATGC 4 cut(s) 929, 2221, 2531, 2533
BsnI GGCC 3 cut(s) 1632, 2036, 2314
Bso31I GGTCTC 2 cut(s) 323, 1395
BsoBI CYCGRG 1 cut(s) 826
Bsp1407I TGTACA 1 cut(s) 1305
Bsp1720I GCTNAGC 1 cut(s) 382
BspACI CCGC 4 cut(s) 99, 924, 1029, 1319
BspANI GGCC 3 cut(s) 1632, 2036, 2314
BspCNI CTCAG 6 cut(s) 152, 395, 820, 1424, 1930, 2101
BspHI TCATGA 2 cut(s) 30, 2317
BspLI GGNNCC 4 cut(s) 442, 576, 609, 887
BspMI ACCTGC 1 cut(s) 2458
BspOI GCTAGC 1 cut(s) 503
BspPI GGATC 9 cut(s) 305, 435, 448, 569, 582, 679, 785, 829, 1850
BspTI CTTAAG 1 cut(s) 430
BspTNI GGTCTC 2 cut(s) 323, 1395
BsrDI GCAATG 2 cut(s) 949, 2010
BsrFI RCCGGY 2 cut(s) 1046, 2310
BsrGI TGTACA 1 cut(s) 1305
BsrI ACTGG 5 cut(s) 266, 665, 666, 1102, 1886
BssAI RCCGGY 2 cut(s) 1046, 2310
BssECI CCNNGG 1 cut(s) 570
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 3 cut(s) 229, 639, 657
Bst6I CTCTTC 4 cut(s) 50, 1474, 1562, 1785
BstAFI CTTAAG 1 cut(s) 430
BstAPI GCANNNNNTGC 1 cut(s) 89
BstAUI TGTACA 1 cut(s) 1305
BstBAI YACGTR 1 cut(s) 196
BstC8I GCNNGC 3 cut(s) 501, 1027, 2312
BstDEI CTNAG 7 cut(s) 24, 139, 382, 807, 1411, 1917, 2109
BstF5I GGATG 4 cut(s) 481, 1238, 2002, 2246
BstMAI GTCTC 7 cut(s) 79, 139, 274, 323, 851, 1395, 1962
BstMWI GCNNNNNNNGC 6 cut(s) 89, 98, 466, 838, 994, 2243
BstNI CCWGG 1 cut(s) 174
BstNSI RCATGY 4 cut(s) 205, 1825, 2104, 2310
BstPAI GACNNNNGTC 2 cut(s) 71, 1088
BstSCI CCNGG 2 cut(s) 172, 583
BstSNI TACGTA 1 cut(s) 196
BstV1I GCAGC 3 cut(s) 753, 1567, 2394
BstV2I GAAGAC 2 cut(s) 71, 1043
BstX2I RGATCY 5 cut(s) 440, 574, 671, 834, 1252
BstYI RGATCY 5 cut(s) 440, 574, 671, 834, 1252
Bsu36I CCTNAGG 1 cut(s) 139
BsuI GTATCC 1 cut(s) 2345
BsuRI GGCC 3 cut(s) 1632, 2036, 2314
BtrI CACGTC 2 cut(s) 375, 951
BtsCI GGATG 4 cut(s) 481, 1238, 2002, 2246
BtsI GCAGTG 3 cut(s) 875, 1195, 1206
BtsIMutI CAGTG 6 cut(s) 673, 875, 1061, 1195, 1206, 2225
BveI ACCTGC 1 cut(s) 2458
Cac8I GCNNGC 3 cut(s) 501, 1027, 2312
CaiI CAGNNNCTG 1 cut(s) 844
CciI TCATGA 2 cut(s) 30, 2317
Cfr10I RCCGGY 2 cut(s) 1046, 2310
Cfr13I GGNCC 5 cut(s) 348, 607, 663, 885, 1631
CsiI ACCWGGT 1 cut(s) 172
Csp6I GTAC 8 cut(s) 208, 658, 1306, 1819, 1925, 1942, 2297, 2357
CspAI ACCGGT 1 cut(s) 1046
CviQI GTAC 8 cut(s) 208, 658, 1306, 1819, 1925, 1942, 2297, 2357
DdeI CTNAG 7 cut(s) 24, 139, 382, 807, 1411, 1917, 2109
DriI GACNNNNNGTC 1 cut(s) 336
EaeI YGGCCR 1 cut(s) 2034
Eam1104I CTCTTC 4 cut(s) 50, 1474, 1562, 1785
Eam1105I GACNNNNNGTC 1 cut(s) 336
EarI CTCTTC 4 cut(s) 50, 1474, 1562, 1785
Eco105I TACGTA 1 cut(s) 196
Eco31I GGTCTC 2 cut(s) 323, 1395
Eco47I GGWCC 4 cut(s) 348, 607, 663, 885
Eco57I CTGAAG 4 cut(s) 83, 1037, 1620, 1733
Eco81I CCTNAGG 1 cut(s) 139
Eco88I CYCGRG 1 cut(s) 826
EcoRI GAATTC 1 cut(s) 2473
EcoRII CCWGG 1 cut(s) 172
EcoT22I ATGCAT 3 cut(s) 822, 2293, 2533
FalI AAGNNNNNCTT 2 cut(s) 390, 422
FaqI GGGAC 4 cut(s) 692, 871, 1096, 2101
FauI CCCGC 2 cut(s) 917, 1022
FauNDI CATATG 3 cut(s) 1219, 2092, 2403
FbaI TGATCA 2 cut(s) 1018, 1141
FblI GTMKAC 1 cut(s) 2507
Fnu4HI GCNGC 4 cut(s) 742, 1320, 1581, 2408
FokI GGATG 4 cut(s) 468, 1245, 2009, 2253
Fsp4HI GCNGC 4 cut(s) 742, 1320, 1581, 2408
FspBI CTAG 6 cut(s) 500, 651, 1071, 1119, 1524, 2511
GluI GCNGC 4 cut(s) 742, 1320, 1581, 2408
GsaI CCCAGC 1 cut(s) 1001
GsuI CTGGAG 2 cut(s) 1930, 2352
HaeIII GGCC 3 cut(s) 1632, 2036, 2314
HapII CCGG 6 cut(s) 117, 584, 1047, 2187, 2238, 2311
HindIII AAGCTT 3 cut(s) 1733, 1745, 2322
HinfI GANTC 9 cut(s) 67, 519, 706, 1178, 1336, 1425, 1770, 2230, 2489
HpaII CCGG 6 cut(s) 117, 584, 1047, 2187, 2238, 2311
HphI GGTGA 6 cut(s) 88, 131, 766, 1013, 2097, 2293
Hpy166II GTNNAC 3 cut(s) 179, 351, 2508
Hpy8I GTNNAC 3 cut(s) 179, 351, 2508
HpyAV CCTTC 3 cut(s) 50, 970, 1901
HpyCH4III ACNGT 3 cut(s) 229, 639, 657
HpyCH4IV ACGT 7 cut(s) 195, 374, 950, 1891, 2119, 2148, 2504
HpyF10VI GCNNNNNNNGC 6 cut(s) 89, 98, 466, 838, 994, 2243
HpyF3I CTNAG 7 cut(s) 24, 139, 382, 807, 1411, 1917, 2109
HpySE526I ACGT 7 cut(s) 195, 374, 950, 1891, 2119, 2148, 2504
KroI GCCGGC 1 cut(s) 2310
KroNI GCCGGC 1 cut(s) 2312
Ksp22I TGATCA 2 cut(s) 1018, 1141
LmnI GCTCC 2 cut(s) 2000, 2371
Lsp1109I GCAGC 3 cut(s) 753, 1567, 2394
LweI GCATC 4 cut(s) 79, 1270, 2278, 2300
MabI ACCWGGT 1 cut(s) 172
MaeI CTAG 6 cut(s) 500, 651, 1071, 1119, 1524, 2511
MaeII ACGT 7 cut(s) 195, 374, 950, 1891, 2119, 2148, 2504
MaeIII GTNAC 8 cut(s) 119, 223, 358, 529, 748, 1090, 2103, 2182
MfeI CAATTG 1 cut(s) 736
MflI RGATCY 5 cut(s) 440, 574, 671, 834, 1252
MlsI TGGCCA 1 cut(s) 2036
MluNI TGGCCA 1 cut(s) 2036
MlyI GAGTC 3 cut(s) 61, 1764, 2224
MmeI TCCRAC 4 cut(s) 418, 834, 1974, 2154
Mox20I TGGCCA 1 cut(s) 2036
Mph1103I ATGCAT 3 cut(s) 822, 2293, 2533
MroNI GCCGGC 1 cut(s) 2310
MroXI GAANNNNTTC 1 cut(s) 2531
MscI TGGCCA 1 cut(s) 2036
MslI CAYNNNNRTG 2 cut(s) 356, 1377
Msp20I TGGCCA 1 cut(s) 2036
MspA1I CMGCKG 1 cut(s) 2372
MspCI CTTAAG 1 cut(s) 430
MspI CCGG 6 cut(s) 117, 584, 1047, 2187, 2238, 2311
MspR9I CCNGG 2 cut(s) 174, 585
MunI CAATTG 1 cut(s) 736
Mva1269I GAATGC 4 cut(s) 929, 2221, 2531, 2533
MvaI CCWGG 1 cut(s) 174
MwoI GCNNNNNNNGC 6 cut(s) 89, 98, 466, 838, 994, 2243
NaeI GCCGGC 1 cut(s) 2312
NciI CCSGG 1 cut(s) 585
NdeI CATATG 3 cut(s) 1219, 2092, 2403
NgoMIV GCCGGC 1 cut(s) 2310
NheI GCTAGC 1 cut(s) 499
NlaIV GGNNCC 4 cut(s) 442, 576, 609, 887
NmuCI GTSAC 4 cut(s) 119, 358, 1090, 2103
NsiI ATGCAT 3 cut(s) 822, 2293, 2533
NspI RCATGY 4 cut(s) 205, 1825, 2104, 2310
OliI CACNNNNGTG 1 cut(s) 356
PagI TCATGA 2 cut(s) 30, 2317
PciI ACATGT 1 cut(s) 2100
PctI GAATGC 4 cut(s) 929, 2221, 2531, 2533
PdiI GCCGGC 1 cut(s) 2312
PdmI GAANNNNTTC 1 cut(s) 2531
PfeI GAWTC 6 cut(s) 519, 706, 1178, 1336, 1425, 2489
PflFI GACNNNGTC 2 cut(s) 850, 1129
PflMI CCANNNNNTGG 3 cut(s) 243, 870, 1559
PinAI ACCGGT 1 cut(s) 1046
PkrI GCNGC 4 cut(s) 743, 1321, 1582, 2409
PleI GAGTC 3 cut(s) 61, 1764, 2224
PpsI GAGTC 3 cut(s) 61, 1764, 2224
Ppu21I YACGTR 1 cut(s) 196
PscI ACATGT 1 cut(s) 2100
PshAI GACNNNNGTC 2 cut(s) 71, 1088
PsiI TTATAA 1 cut(s) 1641
Psp6I CCWGG 1 cut(s) 172
PspFI CCCAGC 1 cut(s) 997
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 4 cut(s) 442, 576, 609, 887
PspPI GGNCC 5 cut(s) 348, 607, 663, 885, 1631
PstNI CAGNNNCTG 1 cut(s) 844
PsuI RGATCY 5 cut(s) 440, 574, 671, 834, 1252
PsyI GACNNNGTC 2 cut(s) 850, 1129
PvuII CAGCTG 1 cut(s) 2372
RsaI GTAC 8 cut(s) 209, 659, 1307, 1820, 1926, 1943, 2298, 2358
RsaNI GTAC 8 cut(s) 208, 658, 1306, 1819, 1925, 1942, 2297, 2357
RseI CAYNNNNRTG 2 cut(s) 356, 1377
SatI GCNGC 4 cut(s) 742, 1320, 1581, 2408
Sau96I GGNCC 5 cut(s) 348, 607, 663, 885, 1631
ScaI AGTACT 3 cut(s) 659, 1926, 1943
SchI GAGTC 3 cut(s) 61, 1764, 2224
ScrFI CCNGG 2 cut(s) 174, 585
SexAI ACCWGGT 1 cut(s) 172
SfaNI GCATC 4 cut(s) 79, 1270, 2278, 2300
SinI GGWCC 4 cut(s) 348, 607, 663, 885
SmiMI CAYNNNNRTG 2 cut(s) 356, 1377
SmlI CTYRAG 2 cut(s) 430, 599
SmoI CTYRAG 2 cut(s) 430, 599
SnaBI TACGTA 1 cut(s) 196
SpeI ACTAGT 2 cut(s) 1070, 2510
SsiI CCGC 4 cut(s) 99, 924, 1029, 1319
SspI AATATT 1 cut(s) 1987
SspMI CTAG 6 cut(s) 500, 651, 1071, 1119, 1524, 2511
StyD4I CCNGG 2 cut(s) 172, 583
TaaI ACNGT 3 cut(s) 229, 639, 657
TaiI ACGT 7 cut(s) 198, 377, 953, 1894, 2122, 2151, 2507
TaqI TCGA 6 cut(s) 691, 1332, 1768, 2217, 2377, 2557
TatI WGTACW 5 cut(s) 657, 1305, 1818, 1924, 1941
TauI GCSGC 1 cut(s) 1322
TfiI GAWTC 6 cut(s) 519, 706, 1178, 1336, 1425, 2489
TscAI CASTG 6 cut(s) 673, 875, 1061, 1202, 1213, 2232
TseFI GTSAC 4 cut(s) 119, 358, 1090, 2103
TseI GCWGC 3 cut(s) 741, 1580, 2407
Tsp45I GTSAC 4 cut(s) 119, 358, 1090, 2103
TspRI CASTG 6 cut(s) 673, 875, 1061, 1202, 1213, 2232
Tth111I GACNNNGTC 2 cut(s) 850, 1129
Van91I CCANNNNNTGG 3 cut(s) 243, 870, 1559
Vha464I CTTAAG 1 cut(s) 430
VpaK11BI GGWCC 4 cut(s) 348, 607, 663, 885
XapI RAATTY 3 cut(s) 693, 1844, 2473
XbaI TCTAGA 1 cut(s) 650
XceI RCATGY 4 cut(s) 205, 1825, 2104, 2310
XcmI CCANNNNNNNNNTGG 3 cut(s) 244, 492, 1834
XmiI GTMKAC 1 cut(s) 2507
XmnI GAANNNNTTC 1 cut(s) 2531
XspI CTAG 6 cut(s) 500, 651, 1071, 1119, 1524, 2511
ZrmI AGTACT 3 cut(s) 659, 1926, 1943
Zsp2I ATGCAT 3 cut(s) 822, 2293, 2533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.