FvH4_6g51830

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000564
Physical Location & Seq
Reverse (-)
38344487 .. 38348641
4155 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g51830.t1

Sequence Viewer

Length: 2466 bp
ATGGATACCAGGAGCAACACAATTAAGTTGATGCTTTCCCTTTTCATCTCATGCCTATATCTCAGTACTTCTATCTCCCTTGCAGCTGACTCCATCACTACAAGCCAATCTCTATCTGGTGATCAAACCATTGTTTCAGCAGGTGGGGTTTTTGAACTGGGTTTCTTCAAACCAGGTAATGCTTCAAAATTCTACATAGGCATTTGGTACAAGCAAGTATCAGAGCAAACCATAGTCTGGGTGGCAAATAGGGAACAACCTGTCCTTGATAGAATGTCTTCAGTACTGAAGATCTCAGATGGTAATTTAGTACTCTTTGATGAGTCCAACACTTCAATCTGGTCTACAAATGTGGCTTCCGACGTCACCTTAGGCACTTCTATACAAGCAGTTCTTTTAGATGATGGAAACTTTGTCTTAAGACCCAAGTCTGATTCCTCCCACCCTTTATGGCAAAGTTTTGATCATCCAACCCATACTTTTCTACCAGGAAGTAAAATTGGATTGAACAGAGGTACCAAACAAACCCAGATGCTTACTTCATGGAATAATATAGAGGATCCTTCACCGGGCCAATTCTCTCTTGAGCTAGACCCAAAGGACAACTCATTTATCATGAAGTGGAATAGGTCTGTATCGTATTGGACAAGTGGATCTTGGGATGAAAACAAACGTACTTTCAGTTTGCTTTGCTATATGTGCAATTTTAGCTATGTTAAAAACGAAAATGAGAGCTTCTTCACCTATTCTCTATATGATCCTCGCATCATATCTCGATTCATAATGGATGTCACGGGTCAGCTTAAGCACCTGACCTGGGATCCTCTGCGACGGGAGTCGTATTGGTCTCAGCCGACAAAACAATGTCAAGTTTATGGTCTGTGTGGGGCATTTAGTAGTTGCGATGAAAACTCCTTTCCCTTCTGTAAGTGTCTGATGGGTTTTGAACCAAAGTCAGTGACCCGTTGGGAGTTGCAGGATTACTCTGTTGGGTGTTCAAGAAAAACCAGGCTGAAGTGTGGAAATGTTACTGGTGTTGAAGGGATGAGTGACAGGTTTATAAAAATGTCAAGCAGGCTATCATCCGCAGATAAACAGCTTCAGGATGTTTATACTATTGAACACTGTGAATCAATTTGCTTAAATGACTGCAATTGCACTGCTTATGGTTATAGCAGCTCTTCTTCTGAATGTACAACTTGGGAGGGCGATCTGTTGGCGGATAAAAATGGAAATACTTTATACATCAGAATAGCAGCTTCGGATTATAAGAATCTCAAAGGTAGAAAATGGAGGATTGTAATTGTAACAGTGTCAGCAACAGTAGGGTTGGTAGGAACCCTACTGTTGCTTACTATAGATTTTTTTGGCTATCTTTTATGGAAGAAAACTTTGGGAAAGAGAAGTGAAACTATCAAGAATCTTAGTGCTGCTGGGGTGGAGAAGGGTACGGAACTAGAACTATTTAGTTTAAGGAGTATATTAGTAGCTACTAATAACTTCTCTGAAGCGAATAAACTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTAGCCATAAAAAGGCTATCAAAGAAGTCCGGGCAAGGACAACAGGAGTTCATGAATGAGTTAAAGCTTATAGCTAAGCTCCAACATACCAGTCTTGTTAGACTCATGGGTTGCTGCATTGAAGCAGAGGAAATGATATTGATGTATGAGTACATGCCAAATCGAAGTTTGGACAAATTTCTGTTTGATCCATCCGAAAAGACAAAATTGGACTGGGGTAAACGTTTTAGAATTATAGAAGGTATAGCTCAAGGATTGCTTTATATCCACAAGTACTCGAGATTAAAAATCATTCACAGGGATCTAAAAGCAAGTAATATTCTGTTGGATGGAACATTGAGCCCTAAGATTTCTGACTTTGGAATGGCAAAGATTTTTGACATAAATCAAACTGAAGCAAATACTAACAGGGTTGTAGGGACCTACGGTTACATGTCCCCTGAGTATGCACGCTATGGTCATTTCTCTGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGTTGTTGGAGATTGTAAGTGGAAAAAAGAATGCTAGTTTCTGTCGTTTTGAAAGAGTACTAACTCTTTCTGAATGGGCATGGGACCTATGGAAAGAAGGAAGAGGAACAGAGGTGATTGATGCATCAGTAAGAGAAACGATTCGGGTTCATGAAGCTTTAAGGTGTATCCATGTAGGACTTTTGTGCGTTCAAGAATCTGCAGCTGATCGACCTGCAATGGCGTCAGTAATTCACATGTTGCAGGGAAATGAAGCTACGTCTCTTCCACCCGCCAATGAACCCGCCTTTTCAACACAGACGAATATCAATACTGCTACTGGTAATTCTTTTCAAACTTCTACCAATTATTCAAACAATGAGCTCACGATTAGTTTGCCAGAAGCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

822

Amino Acids

92.29

Weight (kDa)

6.87

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 182 1.4e-33 D-mannose binding lectin
S_locus_glycop PF00954 215 - 319 7.6e-20 S-locus glycoprotein domain
PAN_2 PF08276 350 - 406 1.1e-09 PAN-like domain
Pkinase PF00069 502 - 701 7.1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 504 - 770 1.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1061, 1269, 1548
AarI CACCTGC 1 cut(s) 131
AatII GACGTC 1 cut(s) 366
Acc36I ACCTGC 2 cut(s) 131, 2296
Acc65I GGTACC 1 cut(s) 515
AccB1I GGYRCC 1 cut(s) 515
AccB7I CCANNNNNTGG 1 cut(s) 237
AccI GTMKAC 1 cut(s) 344
AciI CCGC 4 cut(s) 1086, 1220, 2346, 2358
AclI AACGTT 1 cut(s) 1798
AclWI GGATC 8 cut(s) 554, 567, 661, 752, 815, 828, 1757, 1884
AcsI RAATTY 2 cut(s) 188, 1751
AcuI CTGAAG 6 cut(s) 264, 308, 1034, 1085, 1527, 1989
AcyI GRCGYC 2 cut(s) 363, 2297
AfiI CCNNNNNNNGG 4 cut(s) 237, 569, 817, 1587
AflII CTTAAG 2 cut(s) 418, 803
AflIII ACRYGT 2 cut(s) 2007, 2310
AjnI CCWGG 5 cut(s) 8, 172, 487, 815, 1007
AjuI GAANNNNNNNTTGG 2 cut(s) 1376, 1408
AloI GAACNNNNNNTCC 2 cut(s) 246, 278
Alw21I GWGCWC 1 cut(s) 2439
Alw26I GTCTC 2 cut(s) 852, 2340
AlwI GGATC 8 cut(s) 554, 567, 661, 752, 815, 828, 1757, 1884
Ama87I CYCGRG 1 cut(s) 1852
AoxI GGCC 2 cut(s) 571, 1537
ApeKI GCWGC 6 cut(s) 83, 1176, 1256, 1430, 1689, 2276
ApoI RAATTY 2 cut(s) 188, 1751
Asp700I GAANNNNTTC 2 cut(s) 277, 2214
Asp718I GGTACC 1 cut(s) 515
AspS9I GGNCC 4 cut(s) 571, 1538, 1995, 2158
AsuC2I CCSGG 2 cut(s) 570, 1606
AsuHPI GGTGA 5 cut(s) 131, 358, 558, 733, 2200
AvaI CYCGRG 1 cut(s) 1852
AvaII GGWCC 2 cut(s) 1995, 2158
AxyI CCTNAGG 1 cut(s) 370
BaeI ACNNNNGTAYC 2 cut(s) 499, 532
BamHI GGATCC 2 cut(s) 559, 820
BanI GGYRCC 1 cut(s) 515
BanII GRGCYC 2 cut(s) 1919, 2439
BbsI GAAGAC 1 cut(s) 270
Bbv12I GWGCWC 1 cut(s) 2439
BbvI GCAGC 6 cut(s) 95, 1188, 1268, 1417, 1676, 2288
BccI CCATC 6 cut(s) 101, 293, 398, 931, 1774, 1898
BcgI CGANNNNNNTGC 2 cut(s) 2431, 2465
BciT130I CCWGG 5 cut(s) 10, 174, 489, 817, 1009
BciVI GTATCC 1 cut(s) 2252
BclI TGATCA 2 cut(s) 121, 463
BcnI CCSGG 2 cut(s) 570, 1606
BcoDI GTCTC 2 cut(s) 852, 2340
BfaI CTAG 4 cut(s) 590, 1457, 1520, 2109
BfmI CTRYAG 2 cut(s) 1356, 2274
BfrI CTTAAG 2 cut(s) 418, 803
BfuAI ACCTGC 2 cut(s) 131, 2296
BfuI GTATCC 1 cut(s) 2252
BglII AGATCT 1 cut(s) 291
BisI GCNGC 6 cut(s) 84, 1177, 1257, 1431, 1690, 2277
BlpI GCTNAGC 1 cut(s) 1650
BlsI GCNGC 6 cut(s) 85, 1178, 1258, 1432, 1691, 2278
BmcAI AGTACT 5 cut(s) 67, 285, 312, 1850, 2133
Bme1390I CCNGG 7 cut(s) 10, 174, 489, 570, 817, 1009, 1606
Bme18I GGWCC 2 cut(s) 1995, 2158
BmeT110I CYCGRG 1 cut(s) 1852
BmgT120I GGNCC 4 cut(s) 571, 1538, 1995, 2158
BmiI GGNNCC 6 cut(s) 517, 561, 822, 1339, 1996, 2159
BmrFI CCNGG 7 cut(s) 10, 174, 489, 570, 817, 1009, 1606
BmrI ACTGGG 2 cut(s) 167, 1798
BmsI GCATC 5 cut(s) 21, 522, 774, 2185, 2207
BmuI ACTGGG 2 cut(s) 167, 1798
BoxI GACNNNNGTC 2 cut(s) 427, 835
BpiI GAAGAC 1 cut(s) 270
Bpu1102I GCTNAGC 1 cut(s) 1650
BpuEI CTTGAG 2 cut(s) 605, 1809
BpuMI CCSGG 2 cut(s) 570, 1606
BsaHI GRCGYC 2 cut(s) 363, 2297
BsaI GGTCTC 1 cut(s) 852
BsaJI CCNNGG 1 cut(s) 816
Bsc4I CCNNNNNNNGG 4 cut(s) 237, 569, 817, 1587
Bse1I ACTGG 5 cut(s) 162, 1036, 1665, 1793, 2398
Bse21I CCTNAGG 1 cut(s) 370
Bse3DI GCAATG 1 cut(s) 2298
BseBI CCWGG 5 cut(s) 10, 174, 489, 817, 1009
BseDI CCNNGG 1 cut(s) 816
BseGI GGATG 8 cut(s) 466, 667, 793, 1050, 1082, 1111, 1766, 1909
BseLI CCNNNNNNNGG 4 cut(s) 237, 569, 817, 1587
BseMI GCAATG 1 cut(s) 2298
BseMII CTCAG 5 cut(s) 76, 309, 863, 2007, 2034
BseNI ACTGG 5 cut(s) 162, 1036, 1665, 1793, 2398
BseXI GCAGC 6 cut(s) 95, 1188, 1268, 1417, 1676, 2288
BseYI CCCAGC 1 cut(s) 1433
BshFI GGCC 2 cut(s) 573, 1539
BshNI GGYRCC 1 cut(s) 515
BsiHKAI GWGCWC 1 cut(s) 2439
BsiHKCI CYCGRG 1 cut(s) 1852
BsiSI CCGG 2 cut(s) 569, 1605
BslFI GGGAC 3 cut(s) 1996, 2008, 2171
BslI CCNNNNNNNGG 4 cut(s) 237, 569, 817, 1587
BsmAI GTCTC 2 cut(s) 852, 2340
BsmBI CGTCTC 1 cut(s) 2340
BsmFI GGGAC 3 cut(s) 1996, 2008, 2171
BsmI GAATGC 1 cut(s) 2110
BsnI GGCC 2 cut(s) 573, 1539
Bso31I GGTCTC 1 cut(s) 852
BsoBI CYCGRG 1 cut(s) 1852
Bsp1286I GDGCHC 2 cut(s) 1919, 2439
Bsp1407I TGTACA 1 cut(s) 1193
Bsp1720I GCTNAGC 1 cut(s) 1650
BspACI CCGC 4 cut(s) 1086, 1220, 2346, 2358
BspANI GGCC 2 cut(s) 573, 1539
BspCNI CTCAG 5 cut(s) 75, 308, 862, 2008, 2035
BspHI TCATGA 3 cut(s) 615, 1626, 2224
BspLI GGNNCC 6 cut(s) 517, 561, 822, 1339, 1996, 2159
BspMAI CTGCAG 1 cut(s) 2278
BspMI ACCTGC 2 cut(s) 131, 2296
BspPI GGATC 8 cut(s) 554, 567, 661, 752, 815, 828, 1757, 1884
BspQI GCTCTTC 1 cut(s) 1186
BspT107I GGYRCC 1 cut(s) 515
BspTI CTTAAG 2 cut(s) 418, 803
BspTNI GGTCTC 1 cut(s) 852
BsrDI GCAATG 1 cut(s) 2298
BsrGI TGTACA 1 cut(s) 1193
BsrI ACTGG 5 cut(s) 162, 1036, 1665, 1793, 2398
BssECI CCNNGG 1 cut(s) 816
BssNI GRCGYC 2 cut(s) 363, 2297
Bst2UI CCWGG 5 cut(s) 10, 174, 489, 817, 1009
Bst4CI ACNGT 5 cut(s) 1127, 1312, 1324, 1347, 2003
Bst6I CTCTTC 3 cut(s) 1186, 2170, 2343
BstACI GRCGYC 2 cut(s) 363, 2297
BstAFI CTTAAG 2 cut(s) 418, 803
BstAUI TGTACA 1 cut(s) 1193
BstC8I GCNNGC 2 cut(s) 1076, 2026
BstDEI CTNAG 9 cut(s) 62, 295, 370, 849, 1424, 1650, 1920, 2016, 2043
BstF5I GGATG 8 cut(s) 466, 667, 793, 1050, 1082, 1111, 1766, 1909
BstMAI GTCTC 2 cut(s) 852, 2340
BstMWI GCNNNNNNNGC 2 cut(s) 699, 708
BstNI CCWGG 5 cut(s) 10, 174, 489, 817, 1009
BstNSI RCATGY 3 cut(s) 1732, 2011, 2314
BstPAI GACNNNNGTC 2 cut(s) 427, 835
BstSCI CCNGG 7 cut(s) 8, 172, 487, 568, 815, 1007, 1604
BstSFI CTRYAG 2 cut(s) 1356, 2274
BstV1I GCAGC 6 cut(s) 95, 1188, 1268, 1417, 1676, 2288
BstV2I GAAGAC 1 cut(s) 270
BstX2I RGATCY 5 cut(s) 291, 559, 653, 820, 1876
BstYI RGATCY 5 cut(s) 291, 559, 653, 820, 1876
Bsu36I CCTNAGG 1 cut(s) 370
BsuI GTATCC 1 cut(s) 2252
BsuRI GGCC 2 cut(s) 573, 1539
BtgZI GCGATG 1 cut(s) 918
BtsCI GGATG 8 cut(s) 466, 667, 793, 1050, 1082, 1111, 1766, 1909
BtsI GCAGTG 1 cut(s) 1158
BtsIMutI CAGTG 4 cut(s) 963, 1123, 1158, 1317
BveI ACCTGC 2 cut(s) 131, 2296
Cac8I GCNNGC 2 cut(s) 1076, 2026
CciI TCATGA 3 cut(s) 615, 1626, 2224
Cfr13I GGNCC 4 cut(s) 571, 1538, 1995, 2158
CseI GACGC 1 cut(s) 2286
CsiI ACCWGGT 1 cut(s) 172
DdeI CTNAG 9 cut(s) 62, 295, 370, 849, 1424, 1650, 1920, 2016, 2043
Eam1104I CTCTTC 3 cut(s) 1186, 2170, 2343
EarI CTCTTC 3 cut(s) 1186, 2170, 2343
EciI GGCGGA 1 cut(s) 1235
Ecl136II GAGCTC 1 cut(s) 2437
Eco24I GRGCYC 2 cut(s) 1919, 2439
Eco31I GGTCTC 1 cut(s) 852
Eco47I GGWCC 2 cut(s) 1995, 2158
Eco53kI GAGCTC 1 cut(s) 2437
Eco57I CTGAAG 6 cut(s) 264, 308, 1034, 1085, 1527, 1989
Eco81I CCTNAGG 1 cut(s) 370
Eco88I CYCGRG 1 cut(s) 1852
EcoICRI GAGCTC 1 cut(s) 2437
EcoO109I RGGNCCY 2 cut(s) 1995, 2158
EcoRII CCWGG 5 cut(s) 8, 172, 487, 815, 1007
EcoT22I ATGCAT 1 cut(s) 2200
EcoT38I GRGCYC 2 cut(s) 1919, 2439
Esp3I CGTCTC 1 cut(s) 2340
FalI AAGNNNNNCTT 6 cut(s) 378, 410, 640, 672, 1818, 1850
FaqI GGGAC 3 cut(s) 1996, 2008, 2171
FauI CCCGC 2 cut(s) 2353, 2365
FbaI TGATCA 2 cut(s) 121, 463
FblI GTMKAC 1 cut(s) 344
Fnu4HI GCNGC 6 cut(s) 84, 1177, 1257, 1431, 1690, 2277
FokI GGATG 8 cut(s) 453, 674, 800, 1057, 1069, 1118, 1753, 1916
FriOI GRGCYC 2 cut(s) 1919, 2439
Fsp4HI GCNGC 6 cut(s) 84, 1177, 1257, 1431, 1690, 2277
FspBI CTAG 4 cut(s) 590, 1457, 1520, 2109
GluI GCNGC 6 cut(s) 84, 1177, 1257, 1431, 1690, 2277
GsaI CCCAGC 1 cut(s) 1437
HaeIII GGCC 2 cut(s) 573, 1539
HapII CCGG 2 cut(s) 569, 1605
HgaI GACGC 1 cut(s) 2286
Hin1I GRCGYC 2 cut(s) 363, 2297
HindIII AAGCTT 2 cut(s) 1640, 2229
HpaII CCGG 2 cut(s) 569, 1605
HphI GGTGA 5 cut(s) 131, 358, 558, 733, 2200
Hpy166II GTNNAC 2 cut(s) 345, 1796
Hpy8I GTNNAC 2 cut(s) 345, 1796
Hpy99I CGWCG 2 cut(s) 365, 834
HpyAV CCTTC 6 cut(s) 573, 931, 1034, 1438, 1808, 2165
HpyCH4III ACNGT 5 cut(s) 1127, 1312, 1324, 1347, 2003
HpyCH4IV ACGT 4 cut(s) 363, 673, 1798, 2333
HpyF10VI GCNNNNNNNGC 2 cut(s) 699, 708
HpyF3I CTNAG 9 cut(s) 62, 295, 370, 849, 1424, 1650, 1920, 2016, 2043
HpySE526I ACGT 4 cut(s) 363, 673, 1798, 2333
Hsp92I GRCGYC 2 cut(s) 363, 2297
KpnI GGTACC 1 cut(s) 519
Ksp22I TGATCA 2 cut(s) 121, 463
LguI GCTCTTC 1 cut(s) 1186
LmnI GCTCC 2 cut(s) 12, 1659
Lsp1109I GCAGC 6 cut(s) 95, 1188, 1268, 1417, 1676, 2288
LweI GCATC 5 cut(s) 21, 522, 774, 2185, 2207
MabI ACCWGGT 1 cut(s) 172
MaeI CTAG 4 cut(s) 590, 1457, 1520, 2109
MaeII ACGT 4 cut(s) 363, 673, 1798, 2333
MaeIII GTNAC 7 cut(s) 364, 790, 958, 1027, 1049, 1306, 2003
MboII GAAGA 9 cut(s) 157, 270, 301, 730, 1173, 1176, 1396, 2187, 2330
MfeI CAATTG 1 cut(s) 1153
MflI RGATCY 5 cut(s) 291, 559, 653, 820, 1876
MhlI GDGCHC 2 cut(s) 1919, 2439
MlyI GAGTC 4 cut(s) 83, 332, 845, 1671
MmeI TCCRAC 6 cut(s) 351, 384, 494, 1681, 1881, 2061
Mph1103I ATGCAT 1 cut(s) 2200
MroXI GAANNNNTTC 2 cut(s) 277, 2214
MseI TTAA 9 cut(s) 24, 419, 717, 804, 1142, 1472, 1637, 1859, 2234
MspA1I CMGCKG 2 cut(s) 86, 2279
MspCI CTTAAG 2 cut(s) 418, 803
MspI CCGG 2 cut(s) 569, 1605
MspR9I CCNGG 7 cut(s) 10, 174, 489, 570, 817, 1009, 1606
MunI CAATTG 1 cut(s) 1153
Mva1269I GAATGC 1 cut(s) 2110
MvaI CCWGG 5 cut(s) 10, 174, 489, 817, 1009
MwoI GCNNNNNNNGC 2 cut(s) 699, 708
NciI CCSGG 2 cut(s) 570, 1606
NlaIV GGNNCC 6 cut(s) 517, 561, 822, 1339, 1996, 2159
NmuCI GTSAC 4 cut(s) 364, 790, 958, 1049
NsiI ATGCAT 1 cut(s) 2200
NspI RCATGY 3 cut(s) 1732, 2011, 2314
PaeR7I CTCGAG 1 cut(s) 1852
PagI TCATGA 3 cut(s) 615, 1626, 2224
PaqCI CACCTGC 1 cut(s) 131
PciI ACATGT 2 cut(s) 2007, 2310
PciSI GCTCTTC 1 cut(s) 1186
PctI GAATGC 1 cut(s) 2110
PdmI GAANNNNTTC 2 cut(s) 277, 2214
PfeI GAWTC 8 cut(s) 434, 777, 1130, 1273, 1420, 1533, 2215, 2270
PflMI CCANNNNNTGG 1 cut(s) 237
PkrI GCNGC 6 cut(s) 85, 1178, 1258, 1432, 1691, 2278
PleI GAGTC 4 cut(s) 83, 331, 844, 1671
PpsI GAGTC 4 cut(s) 83, 331, 844, 1671
PpuMI RGGWCCY 2 cut(s) 1995, 2158
PscI ACATGT 2 cut(s) 2007, 2310
PshAI GACNNNNGTC 2 cut(s) 427, 835
PsiI TTATAA 3 cut(s) 1061, 1269, 1548
Psp124BI GAGCTC 1 cut(s) 2439
Psp1406I AACGTT 1 cut(s) 1798
Psp5II RGGWCCY 2 cut(s) 1995, 2158
Psp6I CCWGG 5 cut(s) 8, 172, 487, 815, 1007
PspFI CCCAGC 1 cut(s) 1433
PspGI CCWGG 5 cut(s) 8, 172, 487, 815, 1007
PspN4I GGNNCC 6 cut(s) 517, 561, 822, 1339, 1996, 2159
PspPI GGNCC 4 cut(s) 571, 1538, 1995, 2158
PspPPI RGGWCCY 2 cut(s) 1995, 2158
PstI CTGCAG 1 cut(s) 2278
PsuI RGATCY 5 cut(s) 291, 559, 653, 820, 1876
PvuII CAGCTG 2 cut(s) 86, 2279
SacI GAGCTC 1 cut(s) 2439
SapI GCTCTTC 1 cut(s) 1186
SaqAI TTAA 9 cut(s) 24, 419, 717, 804, 1142, 1472, 1637, 1859, 2234
SatI GCNGC 6 cut(s) 84, 1177, 1257, 1431, 1690, 2277
Sau96I GGNCC 4 cut(s) 571, 1538, 1995, 2158
ScaI AGTACT 5 cut(s) 67, 285, 312, 1850, 2133
SchI GAGTC 4 cut(s) 83, 332, 845, 1671
ScrFI CCNGG 7 cut(s) 10, 174, 489, 570, 817, 1009, 1606
SduI GDGCHC 2 cut(s) 1919, 2439
SexAI ACCWGGT 1 cut(s) 172
SfaNI GCATC 5 cut(s) 21, 522, 774, 2185, 2207
SfcI CTRYAG 2 cut(s) 1356, 2274
Sfr274I CTCGAG 1 cut(s) 1852
SinI GGWCC 2 cut(s) 1995, 2158
SlaI CTCGAG 1 cut(s) 1852
SmlI CTYRAG 5 cut(s) 418, 584, 803, 1824, 1852
SmoI CTYRAG 5 cut(s) 418, 584, 803, 1824, 1852
SsiI CCGC 4 cut(s) 1086, 1220, 2346, 2358
SspI AATATT 1 cut(s) 1894
SspMI CTAG 4 cut(s) 590, 1457, 1520, 2109
SstI GAGCTC 1 cut(s) 2439
StyD4I CCNGG 7 cut(s) 8, 172, 487, 568, 815, 1007, 1604
TaaI ACNGT 5 cut(s) 1127, 1312, 1324, 1347, 2003
TaiI ACGT 4 cut(s) 366, 676, 1801, 2336
TaqI TCGA 5 cut(s) 775, 1738, 1853, 2284, 2461
TatI WGTACW 7 cut(s) 65, 283, 310, 1193, 1725, 1848, 2131
TfiI GAWTC 8 cut(s) 434, 777, 1130, 1273, 1420, 1533, 2215, 2270
Tru1I TTAA 9 cut(s) 24, 419, 717, 804, 1142, 1472, 1637, 1859, 2234
Tru9I TTAA 9 cut(s) 24, 419, 717, 804, 1142, 1472, 1637, 1859, 2234
TscAI CASTG 4 cut(s) 963, 1130, 1165, 1317
TseFI GTSAC 4 cut(s) 364, 790, 958, 1049
TseI GCWGC 6 cut(s) 83, 1176, 1256, 1430, 1689, 2276
Tsp45I GTSAC 4 cut(s) 364, 790, 958, 1049
TspGWI ACGGA 1 cut(s) 1466
TspRI CASTG 4 cut(s) 963, 1130, 1165, 1317
Van91I CCANNNNNTGG 1 cut(s) 237
Vha464I CTTAAG 2 cut(s) 418, 803
VpaK11BI GGWCC 2 cut(s) 1995, 2158
XapI RAATTY 2 cut(s) 188, 1751
XceI RCATGY 3 cut(s) 1732, 2011, 2314
XcmI CCANNNNNNNNNTGG 2 cut(s) 113, 238
XhoI CTCGAG 1 cut(s) 1852
XmiI GTMKAC 1 cut(s) 344
XmnI GAANNNNTTC 2 cut(s) 277, 2214
XspI CTAG 4 cut(s) 590, 1457, 1520, 2109
ZraI GACGTC 1 cut(s) 364
ZrmI AGTACT 5 cut(s) 67, 285, 312, 1850, 2133
Zsp2I ATGCAT 1 cut(s) 2200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.