Rh1CG034300

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000564
Physical Location & Seq
Forward (+)
6542998 .. 6546408
3411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG034300.1

Sequence Viewer

Length: 1860 bp
ATGGAAAGCAAAAATTATTGCATACACGGCGGTGCAAGTTCACATGCAATAAATATATTTTTTTGCAGCCAATCCATAGATACCAAGAGCAACCCAATTAAGTTAATGCTTTCCCTTTTCTTCTTGTGCCTATGTCTCAAGTCCTATATCTGCTTTGGAGCTGACACCATAGCAGCAAACCAGTCTCTCTCTGGTGACCAAACAATTGTTTCAGCTGGTGAGAAATTTGAACTGGGTTTCTTCAAGGCAGGTAATACTTCAAACTACTACATAGGCATGTGGTACTACAAGAAACTAGTACCAGAGCAAACCATAGTCTGGGTGGCCAATAGGGTGCAGCCAGTCTCTGATAGATTTTCTTCAGAGTTGAGAATCTCAAATGGTAATTTGGTACTGTTTAAGTCCAAAACCCCAATTTGGTCCACAGATGTCAGTTCAAGTTCAGCTTCTTTTATACATGTAGTTCTTTTAGATAATGGAAACCTTGTGCTAAGAGCTGGGTCTTTGCCCTTATGGCAAAGTTTTGATCAACCAGCCCATACTTATCTACCAGAAAGCAAAATTGGGTTCAACAATGTTACAAAACGAACTCAAGTCCTGACTTCATGGAAGAATTCTGAGGATCCTTCACCGGGTCAATTCTCTCTTGAGCTAGACCCAACGAGCAAGTCATATATTGTAAAGTGGAATAGGTCTCAACAGTATTGGACAAGTGGACTTTGGGATCAAAACAGACATGTGTTCAGTTTGAGTCCCGAGATGAGGCACTATATCTACAATTTCAGCTATGTTACAAACGAAAATGAGAGCTACTTCACCTATTCTCTTTATGATGCTAGCATCACATCTCGAATAATAATGGATGTATCGGGTCAGGTTCAGCAACAGTCTTGGTTGCACTCTCAGGGATGGTACTTATTTTGGTCTCGACCAAGGAAACAATGTGATGTTTATGGTCTATGTGGGCCATTTAGTAGCTGCAGTGAGAAATCCTTGCCCATCTGTAATTGTTTGAATGGTTATGAACCGAAATTGAAGGTGGGTTGGGATTTGCAGGATTACTCTCTAGGGTGTTCAAGAAAAACCAGGCTGCAGTGTGGAAATGTTACTGGTGTTGATGGGATGAGTGACCAGTTTATAGAAATGTCTAGCAGGCTATCATCCGCAGATATCCAGTTTCAGAATTTGACTTATGTTTATAGTATGGAAGACTGTGAATCAATTTGCTTAAATGATTGCAATTGCACTGCTTATGGTTATAGCAGCTCTTCTTCTGAATGTTCAACTTGGAAAGGAGATCTGTGGGCGGATGAAAATGGAAGAACTTTATACATCAGAATACCAGCTTCTGATCCCACAAGTAGAAAGCAAACCATTGTAATTGCAACGGTCTCAGCAACAGCAGGGTTGCTTACAATAGCTTTTGGCTATTTTTTATGGAAGAATACTTTGGGAAAGAGAAGTGAAACTATAAAGAATCTTAGCGCTGCTGGTGTGGAGAATGATACAGAACTACCACTATTCAGTTTAAGGAGTATATTAGTGGCTACTAATAACTTCTCTGAAGCGAATAAACTAGGAGAGGGAGGATTCGGCCCTGTTTATAAGGGGATTTTGCCTGAAAATCAAGAAGTAGCCATAAAAAGACTATCAAAGAAGTCCGGGCAAGGACAACAGGAGTTCATGAATGAGTTAAAGCTTATAGCGAAGCTCCAACATACCAACCTTGTCAGACTCTTGGGTTGCTGCATTGAAGCAGAGGAAATGATATTGATGTATGAGTACATGCCAAATCGAAGTTTGGACAAATTTTTGTTTGGTAAATGCTCATTTAGTCATTTCTACTATGATTCTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

619

Amino Acids

69.85

Weight (kDa)

6.75

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 104 - 204 6.4e-28 D-mannose binding lectin
S_locus_glycop PF00954 236 - 344 3.3e-27 S-locus glycoprotein domain
PAN_2 PF08276 376 - 434 2.9e-09 PAN-like domain
Pkinase PF00069 521 - 612 5.3e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 523 - 605 1.3e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1605
Acc36I ACCTGC 1 cut(s) 239
AccB7I CCANNNNNTGG 1 cut(s) 318
AciI CCGC 3 cut(s) 30, 1164, 1307
AclWI GGATC 4 cut(s) 617, 630, 732, 1346
AcoI YGGCCR 1 cut(s) 324
AcsI RAATTY 4 cut(s) 224, 613, 1183, 1808
AcuI CTGAAG 2 cut(s) 345, 1584
AfaI GTAC 5 cut(s) 284, 300, 393, 914, 1784
AfeI AGCGCT 1 cut(s) 1486
AfiI CCNNNNNNNGG 4 cut(s) 318, 417, 632, 762
AflIII ACRYGT 2 cut(s) 457, 736
AhlI ACTAGT 1 cut(s) 295
AjnI CCWGG 1 cut(s) 1085
AjuI GAANNNNNNNTTGG 4 cut(s) 546, 578, 1433, 1465
AleI CACNNNNGTG 1 cut(s) 30
Alw26I GTCTC 6 cut(s) 140, 189, 349, 699, 930, 1396
AlwI GGATC 4 cut(s) 617, 630, 732, 1346
AlwNI CAGNNNCTG 2 cut(s) 347, 1349
Ama87I CYCGRG 1 cut(s) 755
Aor51HI AGCGCT 1 cut(s) 1486
AoxI GGCC 3 cut(s) 324, 965, 1594
ApeKI GCWGC 8 cut(s) 66, 173, 337, 978, 1090, 1263, 1487, 1746
ApoI RAATTY 4 cut(s) 224, 613, 1183, 1808
AspLEI GCGC 1 cut(s) 1487
AspS9I GGNCC 3 cut(s) 420, 965, 1595
AsuC2I CCSGG 2 cut(s) 633, 1663
AsuHPI GGTGA 4 cut(s) 206, 230, 621, 808
AsuNHI GCTAGC 1 cut(s) 836
AvaI CYCGRG 1 cut(s) 755
AvaII GGWCC 1 cut(s) 420
BalI TGGCCA 1 cut(s) 326
BamHI GGATCC 1 cut(s) 622
BbsI GAAGAC 1 cut(s) 1215
BbvI GCAGC 8 cut(s) 78, 185, 349, 965, 1077, 1275, 1474, 1733
BccI CCATC 3 cut(s) 903, 1007, 1112
BceAI ACGGC 1 cut(s) 43
BciT130I CCWGG 1 cut(s) 1087
BclI TGATCA 1 cut(s) 526
BcnI CCSGG 2 cut(s) 633, 1663
BcoDI GTCTC 6 cut(s) 140, 189, 349, 699, 930, 1396
BcuI ACTAGT 1 cut(s) 295
BfaI CTAG 6 cut(s) 296, 653, 837, 1067, 1149, 1577
BfmI CTRYAG 2 cut(s) 979, 1091
BfoI RGCGCY 1 cut(s) 1488
BfuAI ACCTGC 1 cut(s) 239
BglI GCCNNNNNGGC 1 cut(s) 514
BglII AGATCT 1 cut(s) 1297
BisI GCNGC 8 cut(s) 67, 174, 338, 979, 1091, 1264, 1488, 1747
BlsI GCNGC 8 cut(s) 68, 175, 339, 980, 1092, 1265, 1489, 1748
Bme1390I CCNGG 3 cut(s) 633, 1087, 1663
Bme18I GGWCC 1 cut(s) 420
BmeT110I CYCGRG 1 cut(s) 755
BmgT120I GGNCC 3 cut(s) 420, 965, 1595
BmiI GGNNCC 1 cut(s) 624
BmrFI CCNGG 3 cut(s) 633, 1087, 1663
BmrI ACTGGG 1 cut(s) 242
BmsI GCATC 2 cut(s) 823, 849
BmtI GCTAGC 1 cut(s) 840
BmuI ACTGGG 1 cut(s) 242
BpiI GAAGAC 1 cut(s) 1215
BpuEI CTTGAG 3 cut(s) 122, 576, 668
BpuMI CCSGG 2 cut(s) 633, 1663
BsaI GGTCTC 3 cut(s) 699, 930, 1396
BsaJI CCNNGG 1 cut(s) 932
Bsc4I CCNNNNNNNGG 4 cut(s) 318, 417, 632, 762
Bse1I ACTGG 6 cut(s) 181, 237, 341, 1114, 1132, 1174
BseBI CCWGG 1 cut(s) 1087
BseDI CCNNGG 1 cut(s) 932
BseGI GGATG 5 cut(s) 868, 914, 1128, 1160, 1315
BseLI CCNNNNNNNGG 4 cut(s) 318, 417, 632, 762
BseMII CTCAG 3 cut(s) 609, 917, 1407
BseNI ACTGG 6 cut(s) 181, 237, 341, 1114, 1132, 1174
BseXI GCAGC 8 cut(s) 78, 185, 349, 965, 1077, 1275, 1474, 1733
BseYI CCCAGC 1 cut(s) 497
BsgI GTGCAG 1 cut(s) 356
BshFI GGCC 3 cut(s) 326, 967, 1596
BsiHKCI CYCGRG 1 cut(s) 755
BsiSI CCGG 2 cut(s) 632, 1662
BslFI GGGAC 1 cut(s) 738
BslI CCNNNNNNNGG 4 cut(s) 318, 417, 632, 762
BsmAI GTCTC 6 cut(s) 140, 189, 349, 699, 930, 1396
BsmFI GGGAC 1 cut(s) 738
BsnI GGCC 3 cut(s) 326, 967, 1596
Bso31I GGTCTC 3 cut(s) 699, 930, 1396
BsoBI CYCGRG 1 cut(s) 755
Bsp143I GATC 5 cut(s) 526, 622, 724, 1297, 1351
BspACI CCGC 3 cut(s) 30, 1164, 1307
BspANI GGCC 3 cut(s) 326, 967, 1596
BspCNI CTCAG 3 cut(s) 610, 916, 1406
BspHI TCATGA 1 cut(s) 1683
BspLI GGNNCC 1 cut(s) 624
BspMAI CTGCAG 2 cut(s) 983, 1095
BspMI ACCTGC 1 cut(s) 239
BspOI GCTAGC 1 cut(s) 840
BspPI GGATC 4 cut(s) 617, 630, 732, 1346
BspQI GCTCTTC 1 cut(s) 1273
BspTNI GGTCTC 3 cut(s) 699, 930, 1396
BsrI ACTGG 6 cut(s) 181, 237, 341, 1114, 1132, 1174
BssECI CCNNGG 1 cut(s) 932
BssMI GATC 5 cut(s) 526, 622, 724, 1297, 1351
BssT1I CCWWGG 1 cut(s) 932
Bst2UI CCWGG 1 cut(s) 1087
Bst4CI ACNGT 5 cut(s) 396, 702, 888, 1214, 1390
Bst6I CTCTTC 1 cut(s) 1273
BstC8I GCNNGC 2 cut(s) 838, 1154
BstDEI CTNAG 5 cut(s) 491, 618, 903, 1393, 1481
BstEII GGTNACC 1 cut(s) 194
BstF5I GGATG 5 cut(s) 868, 914, 1128, 1160, 1315
BstH2I RGCGCY 1 cut(s) 1488
BstHHI GCGC 1 cut(s) 1487
BstKTI GATC 5 cut(s) 529, 625, 727, 1300, 1354
BstMAI GTCTC 6 cut(s) 140, 189, 349, 699, 930, 1396
BstMBI GATC 5 cut(s) 526, 622, 724, 1297, 1351
BstMWI GCNNNNNNNGC 2 cut(s) 27, 514
BstNI CCWGG 1 cut(s) 1087
BstNSI RCATGY 5 cut(s) 47, 280, 461, 740, 1789
BstPI GGTNACC 1 cut(s) 194
BstSCI CCNGG 3 cut(s) 631, 1085, 1661
BstSFI CTRYAG 2 cut(s) 979, 1091
BstV1I GCAGC 8 cut(s) 78, 185, 349, 965, 1077, 1275, 1474, 1733
BstV2I GAAGAC 1 cut(s) 1215
BstX2I RGATCY 2 cut(s) 622, 1297
BstYI RGATCY 2 cut(s) 622, 1297
BsuRI GGCC 3 cut(s) 326, 967, 1596
BtsCI GGATG 5 cut(s) 868, 914, 1128, 1160, 1315
BtsI GCAGTG 3 cut(s) 988, 1100, 1245
BtsIMutI CAGTG 3 cut(s) 988, 1100, 1245
BveI ACCTGC 1 cut(s) 239
Cac8I GCNNGC 2 cut(s) 838, 1154
CaiI CAGNNNCTG 2 cut(s) 347, 1349
CciI TCATGA 1 cut(s) 1683
CfoI GCGC 1 cut(s) 1487
Cfr13I GGNCC 3 cut(s) 420, 965, 1595
Csp6I GTAC 5 cut(s) 283, 299, 392, 913, 1783
CviAII CATG 7 cut(s) 44, 277, 458, 606, 737, 1684, 1786
CviQI GTAC 5 cut(s) 283, 299, 392, 913, 1783
DdeI CTNAG 5 cut(s) 491, 618, 903, 1393, 1481
DpnI GATC 5 cut(s) 528, 624, 726, 1299, 1353
DpnII GATC 5 cut(s) 526, 622, 724, 1297, 1351
EaeI YGGCCR 1 cut(s) 324
Eam1104I CTCTTC 1 cut(s) 1273
EarI CTCTTC 1 cut(s) 1273
EciI GGCGGA 1 cut(s) 1322
Eco130I CCWWGG 1 cut(s) 932
Eco31I GGTCTC 3 cut(s) 699, 930, 1396
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 1 cut(s) 420
Eco47III AGCGCT 1 cut(s) 1486
Eco57I CTGAAG 2 cut(s) 345, 1584
Eco88I CYCGRG 1 cut(s) 755
Eco91I GGTNACC 1 cut(s) 194
EcoO65I GGTNACC 1 cut(s) 194
EcoRI GAATTC 1 cut(s) 613
EcoRII CCWGG 1 cut(s) 1085
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 1 cut(s) 932
ErhI CCWWGG 1 cut(s) 932
FaeI CATG 7 cut(s) 47, 280, 461, 609, 740, 1687, 1789
FalI AAGNNNNNCTT 2 cut(s) 430, 462
FaqI GGGAC 1 cut(s) 738
FatI CATG 7 cut(s) 43, 276, 457, 605, 736, 1683, 1785
FbaI TGATCA 1 cut(s) 526
Fnu4HI GCNGC 8 cut(s) 67, 174, 338, 979, 1091, 1264, 1488, 1747
FokI GGATG 5 cut(s) 875, 921, 1135, 1147, 1322
Fsp4HI GCNGC 8 cut(s) 67, 174, 338, 979, 1091, 1264, 1488, 1747
FspBI CTAG 6 cut(s) 296, 653, 837, 1067, 1149, 1577
GlaI GCGC 1 cut(s) 1486
GluI GCNGC 8 cut(s) 67, 174, 338, 979, 1091, 1264, 1488, 1747
GsaI CCCAGC 1 cut(s) 501
HaeII RGCGCY 1 cut(s) 1488
HaeIII GGCC 3 cut(s) 326, 967, 1596
HapII CCGG 2 cut(s) 632, 1662
HhaI GCGC 1 cut(s) 1487
Hin1II CATG 7 cut(s) 47, 280, 461, 609, 740, 1687, 1789
Hin6I GCGC 1 cut(s) 1485
HinP1I GCGC 1 cut(s) 1485
HindIII AAGCTT 1 cut(s) 1697
HinfI GANTC 7 cut(s) 372, 751, 1217, 1477, 1590, 1734, 1850
HpaII CCGG 2 cut(s) 632, 1662
HphI GGTGA 4 cut(s) 206, 230, 621, 808
Hpy166II GTNNAC 3 cut(s) 41, 423, 716
Hpy188I TCNGA 9 cut(s) 349, 364, 619, 1182, 1276, 1337, 1351, 1564, 1733
Hpy188III TCNNGA 8 cut(s) 598, 647, 755, 849, 927, 1077, 1628, 1684
Hpy8I GTNNAC 3 cut(s) 41, 423, 716
HpyAV CCTTC 2 cut(s) 636, 1030
HpyCH4III ACNGT 5 cut(s) 396, 702, 888, 1214, 1390
HpyF10VI GCNNNNNNNGC 2 cut(s) 27, 514
HpyF3I CTNAG 5 cut(s) 491, 618, 903, 1393, 1481
Hsp92II CATG 7 cut(s) 47, 280, 461, 609, 740, 1687, 1789
HspAI GCGC 1 cut(s) 1485
Ksp22I TGATCA 1 cut(s) 526
Kzo9I GATC 5 cut(s) 526, 622, 724, 1297, 1351
LguI GCTCTTC 1 cut(s) 1273
LmnI GCTCC 2 cut(s) 158, 1716
Lsp1109I GCAGC 8 cut(s) 78, 185, 349, 965, 1077, 1275, 1474, 1733
LweI GCATC 2 cut(s) 823, 849
MaeI CTAG 6 cut(s) 296, 653, 837, 1067, 1149, 1577
MaeIII GTNAC 5 cut(s) 194, 577, 790, 1105, 1127
MalI GATC 5 cut(s) 528, 624, 726, 1299, 1353
MboI GATC 5 cut(s) 526, 622, 724, 1297, 1351
MboII GAAGA 9 cut(s) 112, 232, 351, 622, 1220, 1260, 1263, 1332, 1453
MfeI CAATTG 2 cut(s) 204, 1240
MflI RGATCY 2 cut(s) 622, 1297
MlsI TGGCCA 1 cut(s) 326
MluNI TGGCCA 1 cut(s) 326
MlyI GAGTC 2 cut(s) 760, 1728
MmeI TCCRAC 1 cut(s) 1738
MnlI CCTC 5 cut(s) 613, 756, 1576, 1580, 1753
Mox20I TGGCCA 1 cut(s) 326
MscI TGGCCA 1 cut(s) 326
MseI TTAA 6 cut(s) 99, 104, 399, 1229, 1529, 1694
MslI CAYNNNNRTG 2 cut(s) 30, 275
Msp20I TGGCCA 1 cut(s) 326
MspA1I CMGCKG 1 cut(s) 215
MspI CCGG 2 cut(s) 632, 1662
MspR9I CCNGG 3 cut(s) 633, 1087, 1663
MunI CAATTG 2 cut(s) 204, 1240
MvaI CCWGG 1 cut(s) 1087
MwoI GCNNNNNNNGC 2 cut(s) 27, 514
NciI CCSGG 2 cut(s) 633, 1663
NdeII GATC 5 cut(s) 526, 622, 724, 1297, 1351
NheI GCTAGC 1 cut(s) 836
NlaIII CATG 7 cut(s) 47, 280, 461, 609, 740, 1687, 1789
NlaIV GGNNCC 1 cut(s) 624
NmuCI GTSAC 2 cut(s) 194, 1127
NspI RCATGY 5 cut(s) 47, 280, 461, 740, 1789
OliI CACNNNNGTG 1 cut(s) 30
PagI TCATGA 1 cut(s) 1683
PciI ACATGT 2 cut(s) 457, 736
PciSI GCTCTTC 1 cut(s) 1273
PfeI GAWTC 5 cut(s) 372, 1217, 1477, 1590, 1850
PflMI CCANNNNNTGG 1 cut(s) 318
PkrI GCNGC 8 cut(s) 68, 175, 339, 980, 1092, 1265, 1489, 1748
PleI GAGTC 2 cut(s) 759, 1728
PpsI GAGTC 2 cut(s) 759, 1728
PscI ACATGT 2 cut(s) 457, 736
PsiI TTATAA 1 cut(s) 1605
Psp6I CCWGG 1 cut(s) 1085
PspEI GGTNACC 1 cut(s) 194
PspFI CCCAGC 1 cut(s) 497
PspGI CCWGG 1 cut(s) 1085
PspN4I GGNNCC 1 cut(s) 624
PspPI GGNCC 3 cut(s) 420, 965, 1595
PstI CTGCAG 2 cut(s) 983, 1095
PstNI CAGNNNCTG 2 cut(s) 347, 1349
PsuI RGATCY 2 cut(s) 622, 1297
PvuII CAGCTG 1 cut(s) 215
RsaI GTAC 5 cut(s) 284, 300, 393, 914, 1784
RsaNI GTAC 5 cut(s) 283, 299, 392, 913, 1783
RseI CAYNNNNRTG 2 cut(s) 30, 275
SapI GCTCTTC 1 cut(s) 1273
SaqAI TTAA 6 cut(s) 99, 104, 399, 1229, 1529, 1694
SatI GCNGC 8 cut(s) 67, 174, 338, 979, 1091, 1264, 1488, 1747
Sau3AI GATC 5 cut(s) 526, 622, 724, 1297, 1351
Sau96I GGNCC 3 cut(s) 420, 965, 1595
SchI GAGTC 2 cut(s) 760, 1728
ScrFI CCNGG 3 cut(s) 633, 1087, 1663
SfaNI GCATC 2 cut(s) 823, 849
SfcI CTRYAG 2 cut(s) 979, 1091
SinI GGWCC 1 cut(s) 420
SmiMI CAYNNNNRTG 2 cut(s) 30, 275
SmlI CTYRAG 3 cut(s) 137, 591, 647
SmoI CTYRAG 3 cut(s) 137, 591, 647
SpeI ACTAGT 1 cut(s) 295
SsiI CCGC 3 cut(s) 30, 1164, 1307
SspMI CTAG 6 cut(s) 296, 653, 837, 1067, 1149, 1577
StyD4I CCNGG 3 cut(s) 631, 1085, 1661
StyI CCWWGG 1 cut(s) 932
TaaI ACNGT 5 cut(s) 396, 702, 888, 1214, 1390
TaqI TCGA 3 cut(s) 850, 928, 1795
TatI WGTACW 1 cut(s) 1782
TfiI GAWTC 5 cut(s) 372, 1217, 1477, 1590, 1850
Tru1I TTAA 6 cut(s) 99, 104, 399, 1229, 1529, 1694
Tru9I TTAA 6 cut(s) 99, 104, 399, 1229, 1529, 1694
TscAI CASTG 3 cut(s) 988, 1100, 1252
TseFI GTSAC 2 cut(s) 194, 1127
TseI GCWGC 8 cut(s) 66, 173, 337, 978, 1090, 1263, 1487, 1746
Tsp45I GTSAC 2 cut(s) 194, 1127
TspDTI ATGAA 5 cut(s) 594, 1038, 1326, 1672, 1700
TspRI CASTG 3 cut(s) 988, 1100, 1252
Van91I CCANNNNNTGG 1 cut(s) 318
VpaK11BI GGWCC 1 cut(s) 420
XapI RAATTY 4 cut(s) 224, 613, 1183, 1808
XceI RCATGY 5 cut(s) 47, 280, 461, 740, 1789
XcmI CCANNNNNNNNNTGG 2 cut(s) 188, 319
XspI CTAG 6 cut(s) 296, 653, 837, 1067, 1149, 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.