Rw7G027630

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000564
Physical Location & Seq
Forward (+)
36097704 .. 36100963
3260 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G027630.1

Sequence Viewer

Length: 2475 bp
ATGGATGTCAGCAAATCCATGGATGCCAAAGCCAACCCAGTGCAGATCATGCTTTCCGTTCTTTTGTTATGCCTATATCTGAAGATTCGCATCTCCCATGCTGCTGACGCCATCACTGCAGAACAATCTCTCTCTGGTGATCAAACCATTGTCTCTGCAGGTGGGGTTTTTGAACTGGGTTTCTTCAAACCAGGTAAACCTTCACACTACTACATAGGCATGTGGTATAACAAGCAGAAGCAAGTAGTATCTGTTAAACCCGTTGTAGTTTGGGTGGCAAATAGGGAGCATCCTGTTTCTGATATATTTTCATCGGTGTTGAGGATCTCAGAAGGTAACTTGGTTCTCTTTAATGAGTCCAAAAGTCCAATTTGGTCGACAAATATCACCTTCACAAACACCTTGGATTCAGGCACTTCTATGCAAGCAATTCTATTAGATAACGGCAACCTTGTCTTAAAACCTGAGTCTAGTTCATCCCAGCATTTATGGCAAAGTTTTGATCATCTAGCGGATACCTTTCTTCCGGGAAGTAGAATTGGATTCAACACTGTTACCAAACAAATCCAATCGCTCACTTCATGGAAAAAATCGGATGATCCTTCACCAGGTTATTTCTCTCTTGGGCTAGACCCACATGGTAGCAACTCGTATGTACTGTGGCATGAGGGCAGAACAATTTTCACTAGTGGATTTTGGAATGAGCATAAGAAAATTTTCAGCTCGTTTCCTGAAATGAGTGCTAATAATATCTTCAATTACAGCTATGTTACAAACGAAAACGAAAGTTATTTCACCTATTCTCATTACGATCCTAACACAACTTCCAGATTGGTGCTGGATTACAAGGGGCTGATTATGCACCTGATATTCTCGGAGATTTCCAATCAATGGATGGTGTTATGGTCTCTACCAAGAGATATATGTGACACATACGCTTTTTGTGGGGCATTTAGCTTTTGCAGTTTGAACAAATCGCCAGTCTGTATGTGTTTGAATGGTTTTGTGCCAAAGTCACCGAGTGAATGGAGTGTGGGAGATTTCACTGAGGGGTGTTCGAGAAGAATCAGTCTGCAGTGTGAGAATGCAATTAGAGATAATGCGAAGAAAGATGTGTTTATAGAAATGCTTAGCAAGCCATCATCTGCAGATAAACAGTTTCAGGAAGTTAATAGTACTGAAGAGTGTGAATCAATCTGCTCAAATGACTGCGAATGCACTGCTTATGCTTATGCCAACAAAACTGGATGTTCAACTTGGAGTCAAGATATCTTGGAAAATCAAAATGGATCAACGTTACACATCAGAGTTACTTCTAGTTTTGAGAACCAAAAAGGTCCTGTTGCTAAGCGGTCCCTTGTAATTGCAGTAGTTTCAGCAACAGCAGGATTGCTTATAATCACTTTTGGCTATTTCTTGTGGAAGAAAAGATCAAGAATGGAAAGGAAGTACGGTGAGACTATAAGTAAAGATGGTGGAGAGAATGATACAGAACTGCCACTCTTTGGCTTACAGAGTATATTAACTGCTACAAACAACTTCTCTGAAGCTAATAGACTTGGGGAGGGAGGATTTGGTCCTGTTTATAAGGGGATCTTTATTGATAATCAAGAAGTGGCTGTAAAAAGACTTTCAAAGAATTCCGGACAAGGATATAAGGAGTTCATGAATGAGTTGAAGCTTATAGCCAAGCTCCAACACACCAATCTTGTTAGGATCTTGGGTTGCTGCATTGAAGAGGAGGAAAGAATATTGATCTATGAGTATATGCCCAATCGAAGTTTGGACAAATTTTTGTTTGATTCATCTAAAAATACAAAACTAGATTGGGGTAATCGCTTTCGAATTATAAAAGGTATTTCTCATGGTGTACTTTACATCCACAAGTACTCCAGATTGAAAATCATTCACAGAGATCTCAAAGCAAGTAATATCTTGTTGGATGAAGAAATGAATCCTAAAATTTCGGACTTTGGAATGGCAAAGATTATCGAGATAAATCAAACAGAAGCAAATACCAACAGAGTTGTTGGGACATACGGCTACATGTCACCAGAATATGCACTTTATGGTCATTTCTCTGAGAAATTGGATGTATTTAGCTTTGGAGTGTTGTTGTTGGAAATCGTAACTGGAAAGAGAAATGATGCATTCCGTCATTTTGAGCATTCACCAACTCTTGCTGGATGGGCTTGGAAATTATGGAAAGAAGGCAGAGAAATGGAGGTGATCGATGCATCAATAAGAGAATCATGTCAGCCTCAAGAAGCTTTAAGGTGTATCCAAGTAGGTTTTTTGTGTGTTCAAGAAGATCCGGTTGATCGACCGACAATGTCTTCTGTAATTCGTATACTGCAAGGCAATGCAACTACTTCACTTCCAGTCTCCAAACAACCTGCATTTTCAACACACTGTGATTCCAATACCCTTTTCTCTAACAATGCAGTCACTATTAGTATCCTAGAAGGCCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

824

Amino Acids

92.8

Weight (kDa)

6.29

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 89 - 196 7.3e-31 D-mannose binding lectin
S_locus_glycop PF00954 228 - 339 5.9e-28 S-locus glycoprotein domain
PAN_2 PF08276 370 - 425 1.3e-09 PAN-like domain
Pkinase PF00069 515 - 781 2.5e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 518 - 784 2.3e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1397, 1587, 1850
AarI CACCTGC 1 cut(s) 149
Acc36I ACCTGC 2 cut(s) 149, 2404
AccB7I CCANNNNNTGG 2 cut(s) 891, 1505
AccI GTMKAC 2 cut(s) 377, 2350
AccIII TCCGGA 1 cut(s) 1643
AciI CCGC 2 cut(s) 512, 1351
AclI AACGTT 1 cut(s) 1295
AclWI GGATC 7 cut(s) 332, 593, 806, 1297, 1601, 1724, 2306
AcsI RAATTY 4 cut(s) 714, 1639, 1790, 1962
AcuI CTGAAG 3 cut(s) 101, 1200, 1566
AcyI GRCGYC 1 cut(s) 108
AdeI CACNNNGTG 2 cut(s) 1022, 2414
AfaI GTAC 5 cut(s) 657, 1177, 1451, 1872, 1889
AfiI CCNNNNNNNGG 3 cut(s) 608, 891, 1505
AflIII ACRYGT 1 cut(s) 2046
AhlI ACTAGT 1 cut(s) 686
AjnI CCWGG 2 cut(s) 190, 607
AjuI GAANNNNNNNTTGG 2 cut(s) 2414, 2446
AluBI AGCT 8 cut(s) 723, 765, 957, 1550, 1681, 1693, 2103, 2270
AluI AGCT 8 cut(s) 723, 765, 957, 1550, 1681, 1693, 2103, 2270
Alw26I GTCTC 4 cut(s) 157, 912, 1451, 2389
AlwI GGATC 7 cut(s) 332, 593, 806, 1297, 1601, 1724, 2306
Aor13HI TCCGGA 1 cut(s) 1643
AoxI GGCC 1 cut(s) 2467
ApeKI GCWGC 2 cut(s) 101, 1728
ApoI RAATTY 4 cut(s) 714, 1639, 1790, 1962
ArsI GACNNNNNNTTYG 2 cut(s) 966, 998
Asp700I GAANNNNTTC 1 cut(s) 716
AspS9I GGNCC 3 cut(s) 1337, 1353, 1577
AsuC2I CCSGG 1 cut(s) 528
AsuHPI GGTGA 9 cut(s) 149, 379, 597, 787, 1008, 1466, 2043, 2163, 2239
AsuII TTCGAA 1 cut(s) 1843
AvaII GGWCC 3 cut(s) 1337, 1353, 1577
BbsI GAAGAC 1 cut(s) 2328
BbvI GCAGC 2 cut(s) 88, 1715
BccI CCATC 5 cut(s) 119, 889, 1147, 1466, 2181
BceAI ACGGC 2 cut(s) 460, 2056
BcgI CGANNNNNNTGC 2 cut(s) 1202, 1236
BciT130I CCWGG 2 cut(s) 192, 609
BciVI GTATCC 3 cut(s) 508, 2291, 2468
BclI TGATCA 2 cut(s) 139, 502
BcnI CCSGG 1 cut(s) 528
BcoDI GTCTC 4 cut(s) 157, 912, 1451, 2389
BcuI ACTAGT 1 cut(s) 686
BfaI CTAG 7 cut(s) 471, 509, 629, 687, 1317, 1823, 2462
BfmI CTRYAG 4 cut(s) 117, 156, 1073, 1146
BfuAI ACCTGC 2 cut(s) 149, 2404
BfuI GTATCC 3 cut(s) 508, 2291, 2468
BglII AGATCT 1 cut(s) 1915
BisI GCNGC 2 cut(s) 102, 1729
BlpI GCTNAGC 2 cut(s) 1130, 1347
BlsI GCNGC 2 cut(s) 103, 1730
BmcAI AGTACT 2 cut(s) 1177, 1889
Bme1390I CCNGG 3 cut(s) 192, 528, 609
Bme18I GGWCC 3 cut(s) 1337, 1353, 1577
BmgT120I GGNCC 3 cut(s) 1337, 1353, 1577
BmiI GGNNCC 1 cut(s) 1355
BmrFI CCNGG 3 cut(s) 192, 528, 609
BmrI ACTGGG 2 cut(s) 32, 185
BmsI GCATC 6 cut(s) 13, 99, 298, 2137, 2224, 2246
BmuI ACTGGG 2 cut(s) 32, 185
BpiI GAAGAC 1 cut(s) 2328
BpmI CTGGAG 1 cut(s) 1876
Bpu1102I GCTNAGC 2 cut(s) 1130, 1347
Bpu14I TTCGAA 1 cut(s) 1843
BpuEI CTTGAG 1 cut(s) 2247
BpuMI CCSGG 1 cut(s) 528
Bsa29I ATCGAT 1 cut(s) 2232
BsaBI GATNNNNATC 1 cut(s) 89
BsaHI GRCGYC 1 cut(s) 108
BsaI GGTCTC 1 cut(s) 912
BsaJI CCNNGG 2 cut(s) 18, 402
BsaWI WCCGGW 2 cut(s) 1643, 2314
BsaXI ACNNNNNCTCC 2 cut(s) 1874, 1904
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 891, 1505
Bse1I ACTGG 6 cut(s) 38, 180, 980, 1249, 2137, 2381
Bse3DI GCAATG 1 cut(s) 2368
Bse8I GATNNNNATC 1 cut(s) 89
BseAI TCCGGA 1 cut(s) 1643
BseBI CCWGG 2 cut(s) 192, 609
BseCI ATCGAT 1 cut(s) 2232
BseDI CCNNGG 2 cut(s) 18, 402
BseJI GATNNNNATC 1 cut(s) 89
BseLI CCNNNNNNNGG 3 cut(s) 608, 891, 1505
BseMI GCAATG 1 cut(s) 2368
BseMII CTCAG 4 cut(s) 342, 456, 1038, 2073
BseNI ACTGG 6 cut(s) 38, 180, 980, 1249, 2137, 2381
BseRI GAGGAG 1 cut(s) 1754
BseXI GCAGC 2 cut(s) 88, 1715
BseYI CCCAGC 1 cut(s) 480
BsgI GTGCAG 1 cut(s) 62
Bsh1285I CGRYCG 1 cut(s) 2327
BshFI GGCC 1 cut(s) 2469
BshVI ATCGAT 1 cut(s) 2232
BsiEI CGRYCG 1 cut(s) 2327
BsiSI CCGG 3 cut(s) 527, 1644, 2315
BslFI GGGAC 2 cut(s) 1339, 2047
BslI CCNNNNNNNGG 3 cut(s) 608, 891, 1505
BsmAI GTCTC 4 cut(s) 157, 912, 1451, 2389
BsmFI GGGAC 2 cut(s) 1339, 2047
BsmI GAATGC 4 cut(s) 1090, 1220, 2150, 2167
BsnI GGCC 1 cut(s) 2469
Bso31I GGTCTC 1 cut(s) 912
Bsp119I TTCGAA 1 cut(s) 1843
Bsp13I TCCGGA 1 cut(s) 1643
Bsp1720I GCTNAGC 2 cut(s) 1130, 1347
Bsp19I CCATGG 1 cut(s) 18
BspACI CCGC 2 cut(s) 512, 1351
BspANI GGCC 1 cut(s) 2469
BspCNI CTCAG 4 cut(s) 341, 457, 1039, 2074
BspDI ATCGAT 1 cut(s) 2232
BspEI TCCGGA 1 cut(s) 1643
BspHI TCATGA 1 cut(s) 1665
BspLI GGNNCC 1 cut(s) 1355
BspMAI CTGCAG 4 cut(s) 121, 160, 1077, 1150
BspMI ACCTGC 2 cut(s) 149, 2404
BspPI GGATC 7 cut(s) 332, 593, 806, 1297, 1601, 1724, 2306
BspT104I TTCGAA 1 cut(s) 1843
BspTNI GGTCTC 1 cut(s) 912
BsrDI GCAATG 1 cut(s) 2368
BsrI ACTGG 6 cut(s) 38, 180, 980, 1249, 2137, 2381
BssECI CCNNGG 2 cut(s) 18, 402
BssNAI GTATAC 1 cut(s) 2351
BssNI GRCGYC 1 cut(s) 108
BssT1I CCWWGG 2 cut(s) 18, 402
Bst1107I GTATAC 1 cut(s) 2351
Bst2UI CCWGG 2 cut(s) 192, 609
Bst4CI ACNGT 5 cut(s) 553, 660, 1158, 1454, 2414
Bst6I CTCTTC 2 cut(s) 1176, 1731
BstACI GRCGYC 1 cut(s) 108
BstAPI GCANNNNNTGC 1 cut(s) 49
BstBI TTCGAA 1 cut(s) 1843
BstC8I GCNNGC 2 cut(s) 426, 1136
BstDEI CTNAG 6 cut(s) 328, 465, 1047, 1130, 1347, 2082
BstDSI CCRYGG 1 cut(s) 18
BstENI CCTNNNNNAGG 1 cut(s) 606
BstMAI GTCTC 4 cut(s) 157, 912, 1451, 2389
BstMCI CGRYCG 1 cut(s) 2327
BstMWI GCNNNNNNNGC 7 cut(s) 49, 107, 116, 490, 859, 1135, 2189
BstNI CCWGG 2 cut(s) 192, 609
BstNSI RCATGY 2 cut(s) 223, 2050
BstSCI CCNGG 3 cut(s) 190, 526, 607
BstSFI CTRYAG 4 cut(s) 117, 156, 1073, 1146
BstV1I GCAGC 2 cut(s) 88, 1715
BstV2I GAAGAC 1 cut(s) 2328
BstX2I RGATCY 5 cut(s) 324, 1593, 1716, 1915, 2311
BstYI RGATCY 5 cut(s) 324, 1593, 1716, 1915, 2311
BstZ17I GTATAC 1 cut(s) 2351
Bsu15I ATCGAT 1 cut(s) 2232
BsuI GTATCC 3 cut(s) 508, 2291, 2468
BsuRI GGCC 1 cut(s) 2469
BsuTUI ATCGAT 1 cut(s) 2232
BtgI CCRYGG 1 cut(s) 18
BtsI GCAGTG 3 cut(s) 114, 1082, 1218
BtsIMutI CAGTG 7 cut(s) 45, 114, 549, 1044, 1082, 1218, 2410
BveI ACCTGC 2 cut(s) 149, 2404
Cac8I GCNNGC 2 cut(s) 426, 1136
CciI TCATGA 1 cut(s) 1665
Cfr13I GGNCC 3 cut(s) 1337, 1353, 1577
ClaI ATCGAT 1 cut(s) 2232
CseI GACGC 1 cut(s) 116
CsiI ACCWGGT 2 cut(s) 190, 607
Csp6I GTAC 5 cut(s) 656, 1176, 1450, 1871, 1888
CviQI GTAC 5 cut(s) 656, 1176, 1450, 1871, 1888
DdeI CTNAG 6 cut(s) 328, 465, 1047, 1130, 1347, 2082
DraIII CACNNNGTG 2 cut(s) 1022, 2414
Eam1104I CTCTTC 2 cut(s) 1176, 1731
EarI CTCTTC 2 cut(s) 1176, 1731
Eco130I CCWWGG 2 cut(s) 18, 402
Eco31I GGTCTC 1 cut(s) 912
Eco32I GATATC 1 cut(s) 1270
Eco47I GGWCC 3 cut(s) 1337, 1353, 1577
Eco57I CTGAAG 3 cut(s) 101, 1200, 1566
EcoNI CCTNNNNNAGG 1 cut(s) 606
EcoO109I RGGNCCY 1 cut(s) 1337
EcoRI GAATTC 1 cut(s) 1639
EcoRII CCWGG 2 cut(s) 190, 607
EcoRV GATATC 1 cut(s) 1270
EcoT14I CCWWGG 2 cut(s) 18, 402
EcoT22I ATGCAT 2 cut(s) 2152, 2239
ErhI CCWWGG 2 cut(s) 18, 402
FalI AAGNNNNNCTT 2 cut(s) 1580, 1612
FaqI GGGAC 2 cut(s) 1339, 2047
FbaI TGATCA 2 cut(s) 139, 502
FblI GTMKAC 2 cut(s) 377, 2350
Fnu4HI GCNGC 2 cut(s) 102, 1729
Fsp4HI GCNGC 2 cut(s) 102, 1729
FspBI CTAG 7 cut(s) 471, 509, 629, 687, 1317, 1823, 2462
GluI GCNGC 2 cut(s) 102, 1729
GsaI CCCAGC 1 cut(s) 484
GsuI CTGGAG 1 cut(s) 1876
HaeIII GGCC 1 cut(s) 2469
HapII CCGG 3 cut(s) 527, 1644, 2315
HgaI GACGC 1 cut(s) 116
Hin1I GRCGYC 1 cut(s) 108
HincII GTYRAC 1 cut(s) 378
HindII GTYRAC 1 cut(s) 378
HindIII AAGCTT 2 cut(s) 1679, 2268
HpaII CCGG 3 cut(s) 527, 1644, 2315
HphI GGTGA 9 cut(s) 149, 379, 597, 787, 1008, 1466, 2043, 2163, 2239
Hpy166II GTNNAC 4 cut(s) 197, 378, 1871, 2351
Hpy188I TCNGA 9 cut(s) 81, 301, 331, 595, 877, 1307, 1546, 1969, 2083
Hpy8I GTNNAC 4 cut(s) 197, 378, 1871, 2351
HpyAV CCTTC 6 cut(s) 210, 326, 400, 612, 2204, 2459
HpyCH4III ACNGT 5 cut(s) 553, 660, 1158, 1454, 2414
HpyCH4IV ACGT 1 cut(s) 1295
HpyF10VI GCNNNNNNNGC 7 cut(s) 49, 107, 116, 490, 859, 1135, 2189
HpyF3I CTNAG 6 cut(s) 328, 465, 1047, 1130, 1347, 2082
HpySE526I ACGT 1 cut(s) 1295
Hsp92I GRCGYC 1 cut(s) 108
Kpn2I TCCGGA 1 cut(s) 1643
Ksp22I TGATCA 2 cut(s) 139, 502
LmnI GCTCC 2 cut(s) 286, 1698
Lsp1109I GCAGC 2 cut(s) 88, 1715
LweI GCATC 6 cut(s) 13, 99, 298, 2137, 2224, 2246
MabI ACCWGGT 2 cut(s) 190, 607
MaeI CTAG 7 cut(s) 471, 509, 629, 687, 1317, 1823, 2462
MaeII ACGT 1 cut(s) 1295
MflI RGATCY 5 cut(s) 324, 1593, 1716, 1915, 2311
MlyI GAGTC 3 cut(s) 365, 476, 1270
MmeI TCCRAC 3 cut(s) 1720, 1920, 2100
MnlI CCTC 9 cut(s) 315, 661, 1042, 1558, 1562, 1732, 1735, 2218, 2271
Mph1103I ATGCAT 2 cut(s) 2152, 2239
MroI TCCGGA 1 cut(s) 1643
MroXI GAANNNNTTC 1 cut(s) 716
MseI TTAA 6 cut(s) 255, 351, 458, 1170, 1523, 2273
MslI CAYNNNNRTG 2 cut(s) 218, 419
MspI CCGG 3 cut(s) 527, 1644, 2315
MspR9I CCNGG 3 cut(s) 192, 528, 609
Mva1269I GAATGC 4 cut(s) 1090, 1220, 2150, 2167
MvaI CCWGG 2 cut(s) 192, 609
MwoI GCNNNNNNNGC 7 cut(s) 49, 107, 116, 490, 859, 1135, 2189
NciI CCSGG 1 cut(s) 528
NcoI CCATGG 1 cut(s) 18
NlaIV GGNNCC 1 cut(s) 1355
NmuCI GTSAC 4 cut(s) 926, 1014, 2049, 2446
NsiI ATGCAT 2 cut(s) 2152, 2239
NspI RCATGY 2 cut(s) 223, 2050
NspV TTCGAA 1 cut(s) 1843
PagI TCATGA 1 cut(s) 1665
PaqCI CACCTGC 1 cut(s) 149
PciI ACATGT 1 cut(s) 2046
PctI GAATGC 4 cut(s) 1090, 1220, 2150, 2167
PdmI GAANNNNTTC 1 cut(s) 716
PfeI GAWTC 9 cut(s) 85, 407, 543, 1065, 1190, 1802, 1954, 2249, 2417
PflFI GACNNNGTC 1 cut(s) 2332
PflMI CCANNNNNTGG 2 cut(s) 891, 1505
PfoI TCCNGGA 1 cut(s) 526
PkrI GCNGC 2 cut(s) 103, 1730
PleI GAGTC 3 cut(s) 364, 475, 1269
PpsI GAGTC 3 cut(s) 364, 475, 1269
PpuMI RGGWCCY 1 cut(s) 1337
PscI ACATGT 1 cut(s) 2046
PsiI TTATAA 3 cut(s) 1397, 1587, 1850
Psp1406I AACGTT 1 cut(s) 1295
Psp5II RGGWCCY 1 cut(s) 1337
Psp6I CCWGG 2 cut(s) 190, 607
PspFI CCCAGC 1 cut(s) 480
PspGI CCWGG 2 cut(s) 190, 607
PspN4I GGNNCC 1 cut(s) 1355
PspPI GGNCC 3 cut(s) 1337, 1353, 1577
PspPPI RGGWCCY 1 cut(s) 1337
PstI CTGCAG 4 cut(s) 121, 160, 1077, 1150
PsuI RGATCY 5 cut(s) 324, 1593, 1716, 1915, 2311
PsyI GACNNNGTC 1 cut(s) 2332
RsaI GTAC 5 cut(s) 657, 1177, 1451, 1872, 1889
RsaNI GTAC 5 cut(s) 656, 1176, 1450, 1871, 1888
RseI CAYNNNNRTG 2 cut(s) 218, 419
SalI GTCGAC 1 cut(s) 376
SaqAI TTAA 6 cut(s) 255, 351, 458, 1170, 1523, 2273
SatI GCNGC 2 cut(s) 102, 1729
Sau96I GGNCC 3 cut(s) 1337, 1353, 1577
ScaI AGTACT 2 cut(s) 1177, 1889
SchI GAGTC 3 cut(s) 365, 476, 1270
ScrFI CCNGG 3 cut(s) 192, 528, 609
SexAI ACCWGGT 2 cut(s) 190, 607
SfaNI GCATC 6 cut(s) 13, 99, 298, 2137, 2224, 2246
SfcI CTRYAG 4 cut(s) 117, 156, 1073, 1146
SfuI TTCGAA 1 cut(s) 1843
SinI GGWCC 3 cut(s) 1337, 1353, 1577
SmiMI CAYNNNNRTG 2 cut(s) 218, 419
SmlI CTYRAG 1 cut(s) 2262
SmoI CTYRAG 1 cut(s) 2262
SpeI ACTAGT 1 cut(s) 686
SsiI CCGC 2 cut(s) 512, 1351
SspI AATATT 1 cut(s) 1752
SspMI CTAG 7 cut(s) 471, 509, 629, 687, 1317, 1823, 2462
StyD4I CCNGG 3 cut(s) 190, 526, 607
StyI CCWWGG 2 cut(s) 18, 402
TaaI ACNGT 5 cut(s) 553, 660, 1158, 1454, 2414
TaiI ACGT 1 cut(s) 1298
TaqI TCGA 7 cut(s) 377, 1058, 1777, 1843, 1992, 2232, 2323
TaqII GACCGA 1 cut(s) 2341
TatI WGTACW 4 cut(s) 655, 1175, 1870, 1887
TfiI GAWTC 9 cut(s) 85, 407, 543, 1065, 1190, 1802, 1954, 2249, 2417
Tru1I TTAA 6 cut(s) 255, 351, 458, 1170, 1523, 2273
Tru9I TTAA 6 cut(s) 255, 351, 458, 1170, 1523, 2273
TscAI CASTG 7 cut(s) 45, 121, 556, 1051, 1082, 1225, 2417
TseFI GTSAC 4 cut(s) 926, 1014, 2049, 2446
TseI GCWGC 2 cut(s) 101, 1728
Tsp45I GTSAC 4 cut(s) 926, 1014, 2049, 2446
TspDTI ATGAA 8 cut(s) 300, 465, 570, 1654, 1682, 1794, 1959, 1967
TspGWI ACGGA 2 cut(s) 46, 2144
TspRI CASTG 7 cut(s) 45, 121, 556, 1051, 1082, 1225, 2417
Tth111I GACNNNGTC 1 cut(s) 2332
Van91I CCANNNNNTGG 2 cut(s) 891, 1505
VpaK11BI GGWCC 3 cut(s) 1337, 1353, 1577
XagI CCTNNNNNAGG 1 cut(s) 606
XapI RAATTY 4 cut(s) 714, 1639, 1790, 1962
XceI RCATGY 2 cut(s) 223, 2050
XcmI CCANNNNNNNNNTGG 3 cut(s) 835, 892, 1780
XmiI GTMKAC 2 cut(s) 377, 2350
XmnI GAANNNNTTC 1 cut(s) 716
XspI CTAG 7 cut(s) 471, 509, 629, 687, 1317, 1823, 2462
ZrmI AGTACT 2 cut(s) 1177, 1889
Zsp2I ATGCAT 2 cut(s) 2152, 2239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.