Rw7G027620

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000564
Physical Location & Seq
Forward (+)
36065447 .. 36068188
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G027620.1

Sequence Viewer

Length: 1692 bp
ATGGATAACAAAAACAACCCGGGTTTCATGCTCTTGGTTCTTTTCATATGCCTATATCAAAGTACACATATCTCCCTTGCAGCTGACGCCAATAACGCCATCACAACAAACCAATCTCTCTCTGGAGATCAGACTATTTTCTCCTCGGGGGGTAATTTTGAGCTGGGTTTCTTCAAGCCAGATGAGTTATCAAACTACTACATAGGCATATGGTACTACAAGCAACTAGTATCTGAGAAAACCATAGTCTGGGTGGCCAATAGGGAGCAATCAGTCTCTGATAGATTTTCCTCAGTGCTGAGGATCTCAGATGGTAATTTGGTTCTCTTTAATGAGTCCAACACACCAATTTGGTCAACAGATGTCACCTCCACCACTTCAGTTGCTTCTTCTATTGAAGCAGTTCTTTTAGATAATGGAAACCTTGTCTTAAGAGCTGGGTCTAGGTCATCCTGGCCTTTATGGCAAAGTTTTGACCATCAAGATCATACTTGGCTACCAGGAAATAGAATTGGGATCAACACTATCACTAAACCAACCCAAATTCTCACTTCATGGAAGAATTCAAGAAGAATCAGTCTGCAGTGTTGGAATGGCATTGGGTTTTTGAAAATGTCTGGAGTGTCCTTGCCTGCTGGAAATGACCAGTCTATGGAGGTTGGGAATGGTAAGCAATGTCAATCAATGTGCTTAAATAACTGCTCTTGCACTGCTTATGCTTATGACGGCAATCAATGTACGATGTGGAGTGGAGATCTCTTGGGTATGCAAGAACTCTCGGGACTTGGAAGTACGATTTACATAAAAAATGCAGCTGCAGAGCTTTCTAAAAGTAGAGGTTCTAAGCGGCGGACCCTTTTAATTGCATTACTCTCAGCAACAGCGGCGTTGCTTGCAACAATATTTGGTGTCTACTTGTGGAAGAAAACTTCGGGAAATGGAAGGAAGTATGGTGAAACTTTAAGTAATGTAACTGATATTGGTGGAAAGAACGATACTGAACTCCCACTCTTTGGGTTAAGGACCATATTAGCAGCTACAAACAACTTTTCTGAAGCTAATAAACTCGGAGAGGGAGGATTTGGACCTGTGTATAAGGGATTTTTAACTGGAAATCTGGAAGTAGCCATCAAAAGACTGTCAAAGAAATCCGGGCAAGGACTTCAGGAGTTCATGAATGAGTTAAAGCTTATAGCCAGGCTACAACACACCAATCTTGTTAAGCTATTGGGTTGTTGTACTGAAGAGGAGGAACTGATATTAATCTATGAGTACATGCCTAATAGAAGTTTGGACACATTTTTGTTCGAGATTATAAGTGGAAAAAGGAATGGTTCTTTTTATCATAATGAACATTCTGTAGAAACGCTTGCTGGGTGGGCATGGGAATTATGGAAAGACGGAAGAGGAATGGAGGTAGTTGATGCATCAGTTCGGGAAACATGCCAACCTAATGAAGCTTTAAGGTGTATGCATATAGGCTTTTTGTGTGTTCAAGAAGCTCCAGATGATCGACCAACAATGTCTTCTGTAATTGATATGTTGCAGGGCAACGAAGATACATCCCTTCCACCATCCAAAGAACCTGCATTTTCAACGCATAAGAAGTCCAATTGTGTTGTTTCTTCTTCTCAAGCATTTACCATATTTTCCAACAATGCAGTCACCATTAGTATCCCAGAAGGTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

563

Amino Acids

62.08

Weight (kDa)

5.99

Isoelectric Point (pI)

44.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 81 - 187 7.1e-30 D-mannose binding lectin
PAN_2 PF08276 201 - 255 2.3e-14 PAN-like domain
PAN_1 PF00024 202 - 252 5.6e-07 PAN domain
Pkinase PF00069 351 - 436 3.4e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 353 - 437 5.4e-19 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1316
Acc36I ACCTGC 1 cut(s) 1594
AccB7I CCANNNNNTGG 3 cut(s) 249, 652, 1013
AccI GTMKAC 1 cut(s) 912
AciI CCGC 3 cut(s) 847, 850, 884
AclWI GGATC 2 cut(s) 311, 524
AcoI YGGCCR 1 cut(s) 255
AcsI RAATTY 2 cut(s) 543, 562
AcuI CTGAAG 4 cut(s) 363, 1074, 1148, 1263
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 6 cut(s) 64, 215, 739, 793, 1240, 1274
AfiI CCNNNNNNNGG 3 cut(s) 249, 652, 1013
AflII CTTAAG 1 cut(s) 430
AgsI TTSAA 6 cut(s) 175, 398, 567, 610, 1496, 1596
AhlI ACTAGT 1 cut(s) 226
AjnI CCWGG 3 cut(s) 452, 499, 1196
AjuI GAANNNNNNNTTGG 2 cut(s) 1510, 1542
Alw26I GTCTC 1 cut(s) 280
AlwI GGATC 2 cut(s) 311, 524
AlwNI CAGNNNCTG 1 cut(s) 278
Ama87I CYCGRG 3 cut(s) 19, 145, 778
AoxI GGCC 2 cut(s) 255, 455
ApeKI GCWGC 4 cut(s) 80, 812, 815, 1034
ApoI RAATTY 2 cut(s) 543, 562
AseI ATTAAT 1 cut(s) 1262
Asp700I GAANNNNTTC 1 cut(s) 402
AspS9I GGNCC 3 cut(s) 852, 1023, 1085
AsuC2I CCSGG 3 cut(s) 20, 21, 1153
AsuHPI GGTGA 3 cut(s) 358, 965, 1657
AvaI CYCGRG 3 cut(s) 19, 145, 778
AvaII GGWCC 3 cut(s) 852, 1023, 1085
BalI TGGCCA 1 cut(s) 257
BbsI GAAGAC 1 cut(s) 1518
BbvCI CCTCAGC 1 cut(s) 299
BbvI GCAGC 4 cut(s) 92, 802, 824, 1046
BccI CCATC 5 cut(s) 107, 305, 486, 1136, 1582
BceAI ACGGC 1 cut(s) 742
BciT130I CCWGG 3 cut(s) 454, 501, 1198
BciVI GTATCC 1 cut(s) 1685
BcnI CCSGG 3 cut(s) 20, 21, 1153
BcoDI GTCTC 1 cut(s) 280
BcuI ACTAGT 1 cut(s) 226
BfaI CTAG 2 cut(s) 227, 444
BfmI CTRYAG 3 cut(s) 581, 816, 1359
BfrI CTTAAG 1 cut(s) 430
BfuAI ACCTGC 1 cut(s) 1594
BfuI GTATCC 1 cut(s) 1685
BglI GCCNNNNNGGC 1 cut(s) 463
BglII AGATCT 1 cut(s) 754
BisI GCNGC 6 cut(s) 81, 813, 816, 848, 885, 1035
BlsI GCNGC 6 cut(s) 82, 814, 817, 849, 886, 1036
Bme1390I CCNGG 6 cut(s) 20, 21, 454, 501, 1153, 1198
Bme18I GGWCC 3 cut(s) 852, 1023, 1085
BmeT110I CYCGRG 3 cut(s) 19, 145, 778
BmgT120I GGNCC 3 cut(s) 852, 1023, 1085
BmiI GGNNCC 1 cut(s) 854
BmrFI CCNGG 6 cut(s) 20, 21, 454, 501, 1153, 1198
BmsI GCATC 2 cut(s) 1414, 1436
BpiI GAAGAC 1 cut(s) 1518
BpmI CTGGAG 3 cut(s) 144, 639, 1488
Bpu10I CCTNAGC 1 cut(s) 299
BpuEI CTTGAG 1 cut(s) 1617
BpuMI CCSGG 3 cut(s) 20, 21, 1153
BsaBI GATNNNNATC 1 cut(s) 1262
BsaHI GRCGYC 1 cut(s) 87
BsaJI CCNNGG 2 cut(s) 19, 144
Bsc4I CCNNNNNNNGG 3 cut(s) 249, 652, 1013
Bse1I ACTGG 2 cut(s) 646, 1114
Bse3DI GCAATG 1 cut(s) 680
Bse8I GATNNNNATC 1 cut(s) 1262
BseBI CCWGG 3 cut(s) 454, 501, 1198
BseDI CCNNGG 2 cut(s) 19, 144
BseGI GGATG 3 cut(s) 449, 1562, 1574
BseJI GATNNNNATC 1 cut(s) 1262
BseLI CCNNNNNNNGG 3 cut(s) 249, 652, 1013
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 5 cut(s) 225, 290, 306, 321, 888
BseNI ACTGG 2 cut(s) 646, 1114
BseRI GAGGAG 2 cut(s) 133, 1262
BseXI GCAGC 4 cut(s) 92, 802, 824, 1046
BseYI CCCAGC 3 cut(s) 163, 437, 1373
BshFI GGCC 2 cut(s) 257, 457
BsiHKCI CYCGRG 3 cut(s) 19, 145, 778
BsiSI CCGG 2 cut(s) 20, 1152
BslFI GGGAC 1 cut(s) 795
BslI CCNNNNNNNGG 3 cut(s) 249, 652, 1013
BsmAI GTCTC 1 cut(s) 280
BsmFI GGGAC 1 cut(s) 795
BsnI GGCC 2 cut(s) 257, 457
BsoBI CYCGRG 3 cut(s) 19, 145, 778
Bsp143I GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
BspACI CCGC 3 cut(s) 847, 850, 884
BspANI GGCC 2 cut(s) 257, 457
BspCNI CTCAG 5 cut(s) 226, 291, 305, 320, 887
BspHI TCATGA 1 cut(s) 1173
BspLI GGNNCC 1 cut(s) 854
BspMAI CTGCAG 2 cut(s) 585, 820
BspMI ACCTGC 1 cut(s) 1594
BspPI GGATC 2 cut(s) 311, 524
BspTI CTTAAG 1 cut(s) 430
BsrDI GCAATG 1 cut(s) 680
BsrI ACTGG 2 cut(s) 646, 1114
BssECI CCNNGG 2 cut(s) 19, 144
BssMI GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
BssNI GRCGYC 1 cut(s) 87
Bst2UI CCWGG 3 cut(s) 454, 501, 1198
Bst4CI ACNGT 1 cut(s) 1140
Bst6I CTCTTC 2 cut(s) 1239, 1399
BstACI GRCGYC 1 cut(s) 87
BstAFI CTTAAG 1 cut(s) 430
BstC8I GCNNGC 3 cut(s) 633, 894, 1371
BstDEI CTNAG 6 cut(s) 234, 292, 299, 307, 843, 874
BstF5I GGATG 3 cut(s) 449, 1562, 1574
BstKTI GATC 6 cut(s) 130, 306, 487, 519, 757, 1513
BstMAI GTCTC 1 cut(s) 280
BstMBI GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
BstMWI GCNNNNNNNGC 6 cut(s) 86, 95, 463, 884, 893, 1379
BstNI CCWGG 3 cut(s) 454, 501, 1198
BstNSI RCATGY 2 cut(s) 1279, 1446
BstSCI CCNGG 6 cut(s) 18, 19, 452, 499, 1151, 1196
BstSFI CTRYAG 3 cut(s) 581, 816, 1359
BstV1I GCAGC 4 cut(s) 92, 802, 824, 1046
BstV2I GAAGAC 1 cut(s) 1518
BstX2I RGATCY 2 cut(s) 303, 754
BstYI RGATCY 2 cut(s) 303, 754
BsuI GTATCC 1 cut(s) 1685
BsuRI GGCC 2 cut(s) 257, 457
BtsCI GGATG 3 cut(s) 449, 1562, 1574
BtsI GCAGTG 2 cut(s) 590, 708
BtsIMutI CAGTG 3 cut(s) 300, 590, 708
BveI ACCTGC 1 cut(s) 1594
Cac8I GCNNGC 3 cut(s) 633, 894, 1371
CaiI CAGNNNCTG 1 cut(s) 278
CciI TCATGA 1 cut(s) 1173
Cfr13I GGNCC 3 cut(s) 852, 1023, 1085
Cfr9I CCCGGG 1 cut(s) 19
CseI GACGC 1 cut(s) 95
Csp6I GTAC 6 cut(s) 63, 214, 738, 792, 1239, 1273
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviAII CATG 6 cut(s) 28, 555, 1174, 1276, 1383, 1443
CviQI GTAC 6 cut(s) 63, 214, 738, 792, 1239, 1273
DdeI CTNAG 6 cut(s) 234, 292, 299, 307, 843, 874
DpnI GATC 6 cut(s) 129, 305, 486, 518, 756, 1512
DpnII GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
EaeI YGGCCR 1 cut(s) 255
Eam1104I CTCTTC 2 cut(s) 1239, 1399
EarI CTCTTC 2 cut(s) 1239, 1399
EciI GGCGGA 1 cut(s) 865
Eco47I GGWCC 3 cut(s) 852, 1023, 1085
Eco57I CTGAAG 4 cut(s) 363, 1074, 1148, 1263
Eco88I CYCGRG 3 cut(s) 19, 145, 778
EcoRI GAATTC 1 cut(s) 562
EcoRII CCWGG 3 cut(s) 452, 499, 1196
EcoT22I ATGCAT 2 cut(s) 1429, 1476
FaeI CATG 6 cut(s) 31, 558, 1177, 1279, 1386, 1446
FalI AAGNNNNNCTT 2 cut(s) 390, 422
FaqI GGGAC 1 cut(s) 795
FatI CATG 6 cut(s) 27, 554, 1173, 1275, 1382, 1442
FauNDI CATATG 2 cut(s) 47, 209
FblI GTMKAC 1 cut(s) 912
Fnu4HI GCNGC 6 cut(s) 81, 813, 816, 848, 885, 1035
FokI GGATG 3 cut(s) 436, 1549, 1561
Fsp4HI GCNGC 6 cut(s) 81, 813, 816, 848, 885, 1035
FspBI CTAG 2 cut(s) 227, 444
GluI GCNGC 6 cut(s) 81, 813, 816, 848, 885, 1035
GsaI CCCAGC 3 cut(s) 167, 441, 1377
GsuI CTGGAG 3 cut(s) 144, 639, 1488
HaeIII GGCC 2 cut(s) 257, 457
HapII CCGG 2 cut(s) 20, 1152
HgaI GACGC 1 cut(s) 95
Hin1I GRCGYC 1 cut(s) 87
Hin1II CATG 6 cut(s) 31, 558, 1177, 1279, 1386, 1446
HincII GTYRAC 1 cut(s) 357
HindII GTYRAC 1 cut(s) 357
HindIII AAGCTT 2 cut(s) 1187, 1458
HinfI GANTC 2 cut(s) 335, 573
HpaII CCGG 2 cut(s) 20, 1152
HphI GGTGA 3 cut(s) 358, 965, 1657
Hpy166II GTNNAC 3 cut(s) 65, 357, 913
Hpy188I TCNGA 6 cut(s) 132, 235, 280, 310, 1054, 1070
Hpy8I GTNNAC 3 cut(s) 65, 357, 913
HpyAV CCTTC 3 cut(s) 936, 1577, 1676
HpyCH4III ACNGT 1 cut(s) 1140
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 95, 463, 884, 893, 1379
HpyF3I CTNAG 6 cut(s) 234, 292, 299, 307, 843, 874
Hsp92I GRCGYC 1 cut(s) 87
Hsp92II CATG 6 cut(s) 31, 558, 1177, 1279, 1386, 1446
Kzo9I GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
LmnI GCTCC 2 cut(s) 265, 1507
Lsp1109I GCAGC 4 cut(s) 92, 802, 824, 1046
LweI GCATC 2 cut(s) 1414, 1436
MaeI CTAG 2 cut(s) 227, 444
MaeIII GTNAC 3 cut(s) 364, 970, 1663
MalI GATC 6 cut(s) 129, 305, 486, 518, 756, 1512
MboI GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
MfeI CAATTG 1 cut(s) 1612
MflI RGATCY 2 cut(s) 303, 754
MlsI TGGCCA 1 cut(s) 257
MluNI TGGCCA 1 cut(s) 257
MlyI GAGTC 1 cut(s) 344
MmeI TCCRAC 3 cut(s) 363, 569, 1677
Mox20I TGGCCA 1 cut(s) 257
Mph1103I ATGCAT 2 cut(s) 1429, 1476
MroXI GAANNNNTTC 1 cut(s) 402
MscI TGGCCA 1 cut(s) 257
Msp20I TGGCCA 1 cut(s) 257
MspA1I CMGCKG 3 cut(s) 83, 815, 884
MspCI CTTAAG 1 cut(s) 430
MspI CCGG 2 cut(s) 20, 1152
MspR9I CCNGG 6 cut(s) 20, 21, 454, 501, 1153, 1198
MunI CAATTG 1 cut(s) 1612
MvaI CCWGG 3 cut(s) 454, 501, 1198
MwoI GCNNNNNNNGC 6 cut(s) 86, 95, 463, 884, 893, 1379
NciI CCSGG 3 cut(s) 20, 21, 1153
NdeI CATATG 2 cut(s) 47, 209
NdeII GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
NlaIII CATG 6 cut(s) 31, 558, 1177, 1279, 1386, 1446
NlaIV GGNNCC 1 cut(s) 854
NmuCI GTSAC 2 cut(s) 364, 1663
NsiI ATGCAT 2 cut(s) 1429, 1476
NspI RCATGY 2 cut(s) 1279, 1446
PagI TCATGA 1 cut(s) 1173
PdmI GAANNNNTTC 1 cut(s) 402
PfeI GAWTC 1 cut(s) 573
PflMI CCANNNNNTGG 3 cut(s) 249, 652, 1013
PkrI GCNGC 6 cut(s) 82, 814, 817, 849, 886, 1036
PleI GAGTC 1 cut(s) 343
PpsI GAGTC 1 cut(s) 343
PshBI ATTAAT 1 cut(s) 1262
PsiI TTATAA 1 cut(s) 1316
Psp6I CCWGG 3 cut(s) 452, 499, 1196
PspFI CCCAGC 3 cut(s) 163, 437, 1373
PspGI CCWGG 3 cut(s) 452, 499, 1196
PspN4I GGNNCC 1 cut(s) 854
PspPI GGNCC 3 cut(s) 852, 1023, 1085
PstI CTGCAG 2 cut(s) 585, 820
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 2 cut(s) 303, 754
PvuII CAGCTG 2 cut(s) 83, 815
RsaI GTAC 6 cut(s) 64, 215, 739, 793, 1240, 1274
RsaNI GTAC 6 cut(s) 63, 214, 738, 792, 1239, 1273
SatI GCNGC 6 cut(s) 81, 813, 816, 848, 885, 1035
Sau3AI GATC 6 cut(s) 127, 303, 484, 516, 754, 1510
Sau96I GGNCC 3 cut(s) 852, 1023, 1085
SchI GAGTC 1 cut(s) 344
ScrFI CCNGG 6 cut(s) 20, 21, 454, 501, 1153, 1198
SfaNI GCATC 2 cut(s) 1414, 1436
SfcI CTRYAG 3 cut(s) 581, 816, 1359
SinI GGWCC 3 cut(s) 852, 1023, 1085
SmaI CCCGGG 1 cut(s) 21
SmlI CTYRAG 2 cut(s) 430, 1632
SmoI CTYRAG 2 cut(s) 430, 1632
SpeI ACTAGT 1 cut(s) 226
SsiI CCGC 3 cut(s) 847, 850, 884
SspI AATATT 1 cut(s) 903
SspMI CTAG 2 cut(s) 227, 444
StyD4I CCNGG 6 cut(s) 18, 19, 452, 499, 1151, 1196
TaaI ACNGT 1 cut(s) 1140
TaqI TCGA 3 cut(s) 1308, 1513, 1687
TatI WGTACW 3 cut(s) 62, 1238, 1272
TauI GCSGC 2 cut(s) 850, 887
TfiI GAWTC 1 cut(s) 573
TscAI CASTG 3 cut(s) 300, 590, 715
TseFI GTSAC 2 cut(s) 364, 1663
TseI GCWGC 4 cut(s) 80, 812, 815, 1034
Tsp45I GTSAC 2 cut(s) 364, 1663
TspDTI ATGAA 7 cut(s) 16, 34, 543, 1162, 1190, 1365, 1470
TspGWI ACGGA 1 cut(s) 1416
TspMI CCCGGG 1 cut(s) 19
TspRI CASTG 3 cut(s) 300, 590, 715
Van91I CCANNNNNTGG 3 cut(s) 249, 652, 1013
Vha464I CTTAAG 1 cut(s) 430
VpaK11BI GGWCC 3 cut(s) 852, 1023, 1085
VspI ATTAAT 1 cut(s) 1262
XapI RAATTY 2 cut(s) 543, 562
XceI RCATGY 2 cut(s) 1279, 1446
XcmI CCANNNNNNNNNTGG 2 cut(s) 119, 250
XmaI CCCGGG 1 cut(s) 19
XmiI GTMKAC 1 cut(s) 912
XmnI GAANNNNTTC 1 cut(s) 402
XspI CTAG 2 cut(s) 227, 444
Zsp2I ATGCAT 2 cut(s) 1429, 1476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.