Rroxscaffold_5G00350180

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000564
Physical Location & Seq
Forward (+)
23874456 .. 23877774
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00350180.1

Sequence Viewer

Length: 2190 bp
ATGCTGCATGCCTGCAAATTTTCTACGGACTTGATGTTTTCCATTCTTTTGTTATGCCTCTGTCTCAAGACTCATGATATCTCCCTTGCAGCTGACACCATCACTGCAAACCAATCTCTCTCTGGTGATCAGACCATTGTCTCAGAAGATGGGGTTTTTGAACTGGGTTTCTTCAAACCAGGTAATAATTCAAATTACTATATAGGCATCTGGTATTACAAGAAAGTTGTGTCTGTGCAAACCATAGTCTGGGTGGCAAATAGGGAACGGTCAATCTCTGATAGATTTTCTTCAGTATTGACGATGTCAGATGGAAATTTAGTACTGTTTAATGAGTCCAAAAGCCCAGTTTGGTCTACAAATCTGTCCTCCACCACCTTAGGCTCTGTGAAAGCAGTTCTTTTAGATGATGGAAACCTTGTCTTAAGAGCTGGATCCAGTTCATCCCAACCTTTATGGCAAAGCTTTGATCATCCAGCCCATACTTGGCTACCAGGAAGTAAACTAGGATTCAACAATGTTACCAAACAAACCCAAATGCTCACTTCATGGAAGAATGAGGAGAACCCTGCACCGGGTCCGTTCTCTCTTCAGCTAGACCCAAATGGAAGCAACTCACTTATCATATTGTTGAATTACTTGAATATGTCTGAACAGTATTGGAGCAGTGGACCTTGGGATGGTAGTCTTCATACTTTCAGCTTGAGTCCTGAAATGAGCCTCAATAATATCTTCAATTACAGCCATGTTACAAACGAAAACGGAAGTTATTTCATCTATTCTGTTTATAACCCCAGTGAAGTATCTCGATTAGTGATGTACTTCTCGGGGCAGGTTAGGCAACTAACATGGAAGACCAATAAATGGAACTTGGTTTGGTCTAAACCAAATGTTTATGCCTTTTGTGGGCCATTCTCCACTTACAGTCAGGAATTCTTGCGTTTCTGTAATTGTTTGAATGGTTTTGGGCCAAAATCGCGGAGTGAGTGGGATTTGCAGGATTATTCTGGTGGGTGTTCGAGAAAAACTTTGAATTGTGGGAACGGGACGAAAGAAGACCAGTTTATAGAAAAACCTAGCAAGCCTTTGTCTGCATCTCAACAGCTTCAGCAAGTAGGGAGTATTGAGGATTGTGAATCAAACTGTTTAAGAAAGTGCGATTGCTCTGCTTATGGTTATGGAATTACTACTGGATGTGAAATCTGGACGGGAGATCTCTTGGCAGATGACAAAGGAAGAACTTTACACATCAGAGTACCGGCACCTGAATCAAAGAATCCTAGTAAGAAGCGTCAGAGGAAACATGGTGAGACCATAAGCAATGTTGGTGGAAAGAATGACACAGAACTACCAGTGTTTGACTTGAAGAGTATATTAGCTGCTACTGAAGACTTTTCTGCAGCAAATAAACTGGGTGAGGGAGGATTTGGCCCTGTTTATAAGGGTATTTTGCCTGGAAATCGAAAGGTGGCCATAAAAATGCTGTCAAAGAAGTCTGGTCAAGGGCATCTAGAGTTCATGAATGAGTTGAAGCTGATAGCCAAGCTCCAACATACCAATCTTGTTAGGCTTTTGGGTTGTTGTATTGAAGAGGAGGAAAGGATGTTGATCTATGAGTACATGCCTAATCGAAGTTTGGACAAATTTTTGTTTGATCCATCTGAAAGAACAAAATTGGATTGGGATAGACGCTTTAGAATTATAGAAGGCATTGGTCAAGGACTACTTTATATCCACAAGTACTCGAGATTGAAAATCATTCATAGGGACCTAAAAGCAAGTAATATTTTGTTGGATGAAGCACTGAATCCTAAAATCTCAGACTTTGGAATGGCAAGGATATTCGACATGAATCAAACTGAAGCAAATACCAATAGGGCATGGAAACTGTGGAAAAAGGGTCAGGGAATGGAGGTAATTGATGAATCAGTAAGGGAAACATGTCGACCTCATGAAGCGTTAAGGTGTATCCATGTAGGGCTTCTGTGTGTTCAAGAAGCCCCAGCTGATCGACCAACAATGTTTTCTGTAGTTCATATGTTGCAAGCCGACGAAAGTACAACACTTCCACCCTCCAAAGAACCTGCATTTTCAACACACAAGAATTCCAGTGCTGCTAGTTCTTCTTCTCAAACATCTAGAAATTTTTCCGCCAATCAATTGACCGTTAGTATCCTAGAAGGTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

729

Amino Acids

81.76

Weight (kDa)

7.78

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 81 - 185 1.6e-33 D-mannose binding lectin
S_locus_glycop PF00954 221 - 326 3.5e-17 S-locus glycoprotein domain
PAN_2 PF08276 352 - 407 2.1e-09 PAN-like domain
Pkinase PF00069 467 - 620 6.1e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 468 - 624 1.3e-35 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 685 - 729 7.3e-10 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 789, 1440
Acc36I ACCTGC 2 cut(s) 823, 2092
AccB1I GGYRCC 1 cut(s) 1261
AccB7I CCANNNNNTGG 2 cut(s) 249, 864
AccI GTMKAC 2 cut(s) 356, 1945
AccII CGCG 1 cut(s) 979
AciI CCGC 2 cut(s) 979, 2151
AclWI GGATC 3 cut(s) 429, 442, 1649
AcoI YGGCCR 1 cut(s) 1470
AcsI RAATTY 6 cut(s) 17, 316, 932, 1643, 2104, 2143
AcuI CTGAAG 5 cut(s) 276, 575, 1091, 1407, 1881
AfaI GTAC 6 cut(s) 324, 821, 1257, 1619, 1742, 2059
AfiI CCNNNNNNNGG 7 cut(s) 249, 486, 574, 575, 680, 864, 906
AflII CTTAAG 1 cut(s) 424
AflIII ACRYGT 1 cut(s) 1940
AjnI CCWGG 3 cut(s) 178, 493, 1453
AjuI GAANNNNNNNTTGG 2 cut(s) 2008, 2040
Alw26I GTCTC 3 cut(s) 68, 145, 1304
AlwI GGATC 3 cut(s) 429, 442, 1649
Ama87I CYCGRG 2 cut(s) 826, 1744
AoxI GGCC 4 cut(s) 908, 968, 1429, 1470
ApeKI GCWGC 5 cut(s) 4, 89, 1379, 1400, 2114
ApoI RAATTY 6 cut(s) 17, 316, 932, 1643, 2104, 2143
Asp700I GAANNNNTTC 1 cut(s) 2146
AspS9I GGNCC 6 cut(s) 578, 671, 908, 968, 1430, 1768
AsuC2I CCSGG 1 cut(s) 576
AsuHPI GGTGA 3 cut(s) 137, 1319, 1427
AvaI CYCGRG 2 cut(s) 826, 1744
AvaII GGWCC 3 cut(s) 578, 671, 1768
AxyI CCTNAGG 1 cut(s) 379
BalI TGGCCA 1 cut(s) 1472
BamHI GGATCC 1 cut(s) 434
BanI GGYRCC 1 cut(s) 1261
BbsI GAAGAC 4 cut(s) 680, 860, 1062, 1395
BbvI GCAGC 4 cut(s) 101, 1366, 1412, 2101
BccI CCATC 6 cut(s) 107, 143, 305, 404, 674, 1666
BcgI CGANNNNNNTGC 2 cut(s) 1148, 1182
BciT130I CCWGG 3 cut(s) 180, 495, 1455
BciVI GTATCC 2 cut(s) 1979, 2183
BclI TGATCA 2 cut(s) 127, 469
BcnI CCSGG 1 cut(s) 576
BcoDI GTCTC 3 cut(s) 68, 145, 1304
BfaI CTAG 8 cut(s) 506, 596, 1077, 1281, 1511, 2118, 2139, 2177
BfmI CTRYAG 2 cut(s) 1398, 2028
BfrI CTTAAG 1 cut(s) 424
BfuAI ACCTGC 2 cut(s) 823, 2092
BfuI GTATCC 2 cut(s) 1979, 2183
BglII AGATCT 1 cut(s) 1213
BisI GCNGC 5 cut(s) 5, 90, 1380, 1401, 2115
BlsI GCNGC 5 cut(s) 6, 91, 1381, 1402, 2116
BmcAI AGTACT 2 cut(s) 324, 1742
Bme1390I CCNGG 4 cut(s) 180, 495, 576, 1455
Bme18I GGWCC 3 cut(s) 578, 671, 1768
BmeT110I CYCGRG 2 cut(s) 826, 1744
BmgT120I GGNCC 6 cut(s) 578, 671, 908, 968, 1430, 1768
BmiI GGNNCC 4 cut(s) 436, 579, 1263, 1769
BmrFI CCNGG 4 cut(s) 180, 495, 576, 1455
BmrI ACTGGG 4 cut(s) 173, 341, 789, 1421
BmsI GCATC 3 cut(s) 216, 1103, 1516
BmuI ACTGGG 4 cut(s) 173, 341, 789, 1421
BoxI GACNNNNGTC 1 cut(s) 137
BpiI GAAGAC 4 cut(s) 680, 860, 1062, 1395
BpuEI CTTGAG 2 cut(s) 50, 724
BpuMI CCSGG 1 cut(s) 576
BsaBI GATNNNNATC 1 cut(s) 1607
BsaI GGTCTC 1 cut(s) 1304
BsaJI CCNNGG 1 cut(s) 674
Bsc4I CCNNNNNNNGG 7 cut(s) 249, 486, 574, 575, 680, 864, 906
Bse118I RCCGGY 1 cut(s) 1258
Bse1I ACTGG 9 cut(s) 168, 347, 438, 795, 1060, 1195, 1352, 1416, 2109
Bse21I CCTNAGG 1 cut(s) 379
Bse3DI GCAATG 1 cut(s) 1327
Bse8I GATNNNNATC 1 cut(s) 1607
BseBI CCWGG 3 cut(s) 180, 495, 1455
BseDI CCNNGG 1 cut(s) 674
BseGI GGATG 6 cut(s) 443, 472, 685, 1199, 1608, 1801
BseJI GATNNNNATC 1 cut(s) 1607
BseLI CCNNNNNNNGG 7 cut(s) 249, 486, 574, 575, 680, 864, 906
BseMI GCAATG 1 cut(s) 1327
BseMII CTCAG 2 cut(s) 156, 1833
BseNI ACTGG 9 cut(s) 168, 347, 438, 795, 1060, 1195, 1352, 1416, 2109
BseRI GAGGAG 2 cut(s) 575, 1607
BseXI GCAGC 4 cut(s) 101, 1366, 1412, 2101
BseYI CCCAGC 1 cut(s) 2002
BsgI GTGCAG 1 cut(s) 555
Bsh1236I CGCG 1 cut(s) 979
BshFI GGCC 4 cut(s) 910, 970, 1431, 1472
BshNI GGYRCC 1 cut(s) 1261
BsiHKCI CYCGRG 2 cut(s) 826, 1744
BsiSI CCGG 2 cut(s) 575, 1259
BslFI GGGAC 2 cut(s) 1060, 1781
BslI CCNNNNNNNGG 7 cut(s) 249, 486, 574, 575, 680, 864, 906
BsmAI GTCTC 3 cut(s) 68, 145, 1304
BsmFI GGGAC 2 cut(s) 1060, 1781
BsnI GGCC 4 cut(s) 910, 970, 1431, 1472
Bso31I GGTCTC 1 cut(s) 1304
BsoBI CYCGRG 2 cut(s) 826, 1744
Bsp143I GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
BspACI CCGC 2 cut(s) 979, 2151
BspANI GGCC 4 cut(s) 910, 970, 1431, 1472
BspCNI CTCAG 2 cut(s) 155, 1832
BspFNI CGCG 1 cut(s) 979
BspHI TCATGA 3 cut(s) 73, 1518, 1951
BspLI GGNNCC 4 cut(s) 436, 579, 1263, 1769
BspMAI CTGCAG 1 cut(s) 1402
BspMI ACCTGC 2 cut(s) 823, 2092
BspPI GGATC 3 cut(s) 429, 442, 1649
BspT107I GGYRCC 1 cut(s) 1261
BspTI CTTAAG 1 cut(s) 424
BspTNI GGTCTC 1 cut(s) 1304
BsrDI GCAATG 1 cut(s) 1327
BsrFI RCCGGY 1 cut(s) 1258
BsrI ACTGG 9 cut(s) 168, 347, 438, 795, 1060, 1195, 1352, 1416, 2109
BssAI RCCGGY 1 cut(s) 1258
BssECI CCNNGG 1 cut(s) 674
BssMI GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
BssT1I CCWWGG 1 cut(s) 674
Bst2UI CCWGG 3 cut(s) 180, 495, 1455
Bst4CI ACNGT 7 cut(s) 270, 327, 657, 926, 1145, 1890, 2167
Bst6I CTCTTC 3 cut(s) 594, 1361, 1584
BstAFI CTTAAG 1 cut(s) 424
BstC8I GCNNGC 4 cut(s) 9, 13, 1082, 2046
BstDEI CTNAG 3 cut(s) 142, 379, 1819
BstF5I GGATG 6 cut(s) 443, 472, 685, 1199, 1608, 1801
BstFNI CGCG 1 cut(s) 979
BstKTI GATC 7 cut(s) 130, 437, 472, 1216, 1611, 1657, 2011
BstMAI GTCTC 3 cut(s) 68, 145, 1304
BstMBI GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
BstMWI GCNNNNNNNGC 2 cut(s) 838, 976
BstNI CCWGG 3 cut(s) 180, 495, 1455
BstNSI RCATGY 3 cut(s) 11, 1624, 1944
BstPAI GACNNNNGTC 1 cut(s) 137
BstSCI CCNGG 4 cut(s) 178, 493, 574, 1453
BstSFI CTRYAG 2 cut(s) 1398, 2028
BstUI CGCG 1 cut(s) 979
BstV1I GCAGC 4 cut(s) 101, 1366, 1412, 2101
BstV2I GAAGAC 4 cut(s) 680, 860, 1062, 1395
BstX2I RGATCY 2 cut(s) 434, 1213
BstYI RGATCY 2 cut(s) 434, 1213
Bsu36I CCTNAGG 1 cut(s) 379
BsuI GTATCC 2 cut(s) 1979, 2183
BsuRI GGCC 4 cut(s) 910, 970, 1431, 1472
BtsCI GGATG 6 cut(s) 443, 472, 685, 1199, 1608, 1801
BtsI GCAGTG 2 cut(s) 102, 673
BtsIMutI CAGTG 6 cut(s) 102, 673, 802, 1359, 1802, 2116
BveI ACCTGC 2 cut(s) 823, 2092
Cac8I GCNNGC 4 cut(s) 9, 13, 1082, 2046
CciI TCATGA 3 cut(s) 73, 1518, 1951
Cfr10I RCCGGY 1 cut(s) 1258
Cfr13I GGNCC 6 cut(s) 578, 671, 908, 968, 1430, 1768
CseI GACGC 2 cut(s) 1280, 1698
CsiI ACCWGGT 1 cut(s) 178
Csp6I GTAC 6 cut(s) 323, 820, 1256, 1618, 1741, 2058
CspCI CAANNNNNGTGG 2 cut(s) 1309, 1344
CviQI GTAC 6 cut(s) 323, 820, 1256, 1618, 1741, 2058
DdeI CTNAG 3 cut(s) 142, 379, 1819
DpnI GATC 7 cut(s) 129, 436, 471, 1215, 1610, 1656, 2010
DpnII GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
EaeI YGGCCR 1 cut(s) 1470
Eam1104I CTCTTC 3 cut(s) 594, 1361, 1584
EarI CTCTTC 3 cut(s) 594, 1361, 1584
EciI GGCGGA 1 cut(s) 2140
Eco130I CCWWGG 1 cut(s) 674
Eco31I GGTCTC 1 cut(s) 1304
Eco32I GATATC 1 cut(s) 79
Eco47I GGWCC 3 cut(s) 578, 671, 1768
Eco57I CTGAAG 5 cut(s) 276, 575, 1091, 1407, 1881
Eco81I CCTNAGG 1 cut(s) 379
Eco88I CYCGRG 2 cut(s) 826, 1744
EcoO109I RGGNCCY 1 cut(s) 1768
EcoRI GAATTC 2 cut(s) 932, 2104
EcoRII CCWGG 3 cut(s) 178, 493, 1453
EcoRV GATATC 1 cut(s) 79
EcoT14I CCWWGG 1 cut(s) 674
ErhI CCWWGG 1 cut(s) 674
FalI AAGNNNNNCTT 4 cut(s) 384, 416, 1710, 1742
FaqI GGGAC 2 cut(s) 1060, 1781
FauNDI CATATG 1 cut(s) 2037
FbaI TGATCA 2 cut(s) 127, 469
FblI GTMKAC 2 cut(s) 356, 1945
Fnu4HI GCNGC 5 cut(s) 5, 90, 1380, 1401, 2115
FokI GGATG 6 cut(s) 430, 459, 692, 1206, 1615, 1808
Fsp4HI GCNGC 5 cut(s) 5, 90, 1380, 1401, 2115
FspBI CTAG 8 cut(s) 506, 596, 1077, 1281, 1511, 2118, 2139, 2177
GluI GCNGC 5 cut(s) 5, 90, 1380, 1401, 2115
GsaI CCCAGC 1 cut(s) 2006
HaeIII GGCC 4 cut(s) 910, 970, 1431, 1472
HapII CCGG 2 cut(s) 575, 1259
HgaI GACGC 2 cut(s) 1280, 1698
HincII GTYRAC 1 cut(s) 1946
HindII GTYRAC 1 cut(s) 1946
HindIII AAGCTT 1 cut(s) 463
HpaII CCGG 2 cut(s) 575, 1259
HphI GGTGA 3 cut(s) 137, 1319, 1427
Hpy166II GTNNAC 4 cut(s) 357, 503, 671, 1946
Hpy188I TCNGA 9 cut(s) 132, 145, 280, 310, 652, 1253, 1296, 1663, 1822
Hpy8I GTNNAC 4 cut(s) 357, 503, 671, 1946
Hpy99I CGWCG 1 cut(s) 2054
HpyAV CCTTC 2 cut(s) 1700, 2174
HpyCH4III ACNGT 7 cut(s) 270, 327, 657, 926, 1145, 1890, 2167
HpyF10VI GCNNNNNNNGC 2 cut(s) 838, 976
HpyF3I CTNAG 3 cut(s) 142, 379, 1819
Ksp22I TGATCA 2 cut(s) 127, 469
Kzo9I GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
LmnI GCTCC 2 cut(s) 663, 1551
Lsp1109I GCAGC 4 cut(s) 101, 1366, 1412, 2101
LweI GCATC 3 cut(s) 216, 1103, 1516
MabI ACCWGGT 1 cut(s) 178
MaeI CTAG 8 cut(s) 506, 596, 1077, 1281, 1511, 2118, 2139, 2177
MaeIII GTNAC 2 cut(s) 520, 748
MalI GATC 7 cut(s) 129, 436, 471, 1215, 1610, 1656, 2010
MboI GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
MfeI CAATTG 1 cut(s) 2159
MflI RGATCY 2 cut(s) 434, 1213
MlsI TGGCCA 1 cut(s) 1472
MluNI TGGCCA 1 cut(s) 1472
MlyI GAGTC 3 cut(s) 64, 344, 715
MmeI TCCRAC 2 cut(s) 1573, 1773
Mox20I TGGCCA 1 cut(s) 1472
MroXI GAANNNNTTC 1 cut(s) 2146
MscI TGGCCA 1 cut(s) 1472
MseI TTAA 4 cut(s) 330, 425, 1148, 1961
MslI CAYNNNNRTG 1 cut(s) 1478
Msp20I TGGCCA 1 cut(s) 1472
MspA1I CMGCKG 2 cut(s) 92, 2006
MspCI CTTAAG 1 cut(s) 424
MspI CCGG 2 cut(s) 575, 1259
MspR9I CCNGG 4 cut(s) 180, 495, 576, 1455
MunI CAATTG 1 cut(s) 2159
MvaI CCWGG 3 cut(s) 180, 495, 1455
MvnI CGCG 1 cut(s) 979
MwoI GCNNNNNNNGC 2 cut(s) 838, 976
NciI CCSGG 1 cut(s) 576
NdeI CATATG 1 cut(s) 2037
NdeII GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
NlaIV GGNNCC 4 cut(s) 436, 579, 1263, 1769
NspI RCATGY 3 cut(s) 11, 1624, 1944
PaeI GCATGC 1 cut(s) 11
PaeR7I CTCGAG 1 cut(s) 1744
PagI TCATGA 3 cut(s) 73, 1518, 1951
PciI ACATGT 1 cut(s) 1940
PdmI GAANNNNTTC 1 cut(s) 2146
PfeI GAWTC 7 cut(s) 510, 1136, 1268, 1276, 1807, 1852, 1925
PflFI GACNNNGTC 1 cut(s) 304
PflMI CCANNNNNTGG 2 cut(s) 249, 864
PkrI GCNGC 5 cut(s) 6, 91, 1381, 1402, 2116
PleI GAGTC 3 cut(s) 64, 343, 714
PpsI GAGTC 3 cut(s) 64, 343, 714
PpuMI RGGWCCY 1 cut(s) 1768
PscI ACATGT 1 cut(s) 1940
PshAI GACNNNNGTC 1 cut(s) 137
PsiI TTATAA 2 cut(s) 789, 1440
Psp5II RGGWCCY 1 cut(s) 1768
Psp6I CCWGG 3 cut(s) 178, 493, 1453
PspFI CCCAGC 1 cut(s) 2002
PspGI CCWGG 3 cut(s) 178, 493, 1453
PspN4I GGNNCC 4 cut(s) 436, 579, 1263, 1769
PspPI GGNCC 6 cut(s) 578, 671, 908, 968, 1430, 1768
PspPPI RGGWCCY 1 cut(s) 1768
PstI CTGCAG 1 cut(s) 1402
PsuI RGATCY 2 cut(s) 434, 1213
PsyI GACNNNGTC 1 cut(s) 304
PvuII CAGCTG 2 cut(s) 92, 2006
RsaI GTAC 6 cut(s) 324, 821, 1257, 1619, 1742, 2059
RsaNI GTAC 6 cut(s) 323, 820, 1256, 1618, 1741, 2058
RseI CAYNNNNRTG 1 cut(s) 1478
SalI GTCGAC 1 cut(s) 1944
SaqAI TTAA 4 cut(s) 330, 425, 1148, 1961
SatI GCNGC 5 cut(s) 5, 90, 1380, 1401, 2115
Sau3AI GATC 7 cut(s) 127, 434, 469, 1213, 1608, 1654, 2008
Sau96I GGNCC 6 cut(s) 578, 671, 908, 968, 1430, 1768
ScaI AGTACT 2 cut(s) 324, 1742
SchI GAGTC 3 cut(s) 64, 344, 715
ScrFI CCNGG 4 cut(s) 180, 495, 576, 1455
SexAI ACCWGGT 1 cut(s) 178
SfaNI GCATC 3 cut(s) 216, 1103, 1516
SfcI CTRYAG 2 cut(s) 1398, 2028
Sfr274I CTCGAG 1 cut(s) 1744
SinI GGWCC 3 cut(s) 578, 671, 1768
SlaI CTCGAG 1 cut(s) 1744
SmiMI CAYNNNNRTG 1 cut(s) 1478
SmlI CTYRAG 4 cut(s) 65, 424, 703, 1744
SmoI CTYRAG 4 cut(s) 65, 424, 703, 1744
SphI GCATGC 1 cut(s) 11
SsiI CCGC 2 cut(s) 979, 2151
SspI AATATT 1 cut(s) 1786
SspMI CTAG 8 cut(s) 506, 596, 1077, 1281, 1511, 2118, 2139, 2177
StyD4I CCNGG 4 cut(s) 178, 493, 574, 1453
StyI CCWWGG 1 cut(s) 674
TaaI ACNGT 7 cut(s) 270, 327, 657, 926, 1145, 1890, 2167
TaqI TCGA 8 cut(s) 808, 1019, 1462, 1630, 1745, 1845, 1945, 2011
TatI WGTACW 5 cut(s) 322, 819, 1617, 1740, 2057
TfiI GAWTC 7 cut(s) 510, 1136, 1268, 1276, 1807, 1852, 1925
Tru1I TTAA 4 cut(s) 330, 425, 1148, 1961
Tru9I TTAA 4 cut(s) 330, 425, 1148, 1961
TscAI CASTG 6 cut(s) 109, 673, 802, 1359, 1809, 2116
TseI GCWGC 5 cut(s) 4, 89, 1379, 1400, 2114
TspGWI ACGGA 3 cut(s) 41, 570, 777
TspRI CASTG 6 cut(s) 109, 673, 802, 1359, 1809, 2116
Tth111I GACNNNGTC 1 cut(s) 304
Van91I CCANNNNNTGG 2 cut(s) 249, 864
Vha464I CTTAAG 1 cut(s) 424
VpaK11BI GGWCC 3 cut(s) 578, 671, 1768
XapI RAATTY 6 cut(s) 17, 316, 932, 1643, 2104, 2143
XbaI TCTAGA 2 cut(s) 1510, 2138
XceI RCATGY 3 cut(s) 11, 1624, 1944
XcmI CCANNNNNNNNNTGG 3 cut(s) 119, 250, 483
XhoI CTCGAG 1 cut(s) 1744
XmiI GTMKAC 2 cut(s) 356, 1945
XmnI GAANNNNTTC 1 cut(s) 2146
XspI CTAG 8 cut(s) 506, 596, 1077, 1281, 1511, 2118, 2139, 2177
ZrmI AGTACT 2 cut(s) 324, 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.