pycom09g02050

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
1491217 .. 1492646
1430 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g02050.2

Sequence Viewer

Length: 1335 bp
ATGTTTGAGCTAGGTTTCTTCAAACCAGGTCAGCTTTCAAACTACTATATAGGCATATGGTACTCCAAGCAAGTAGTATCTGAGATGACTGTTGTTTGGGTAGCAAACAGGGAAATACCAGTATTTGATAGATTTTCTTCGGTCTTGAGCATCTTAGATGGTAATTTAGTTCTCTTGAACGAGTCCAAAACCCCGGTTTGGTCAACAAATTTAAACTCCACCACCAATTCTGGTTCTGTACAAGCATTTCTTTTGGATAGCGGAAACCTTGTCTTGAAAGCGGGCTCTAGTAATAATACATCAGAGCCTTTATGGCAAAGCTTTGATCATCCAACCCACACTTGGCTACCAGGAGGTAGATTTGGATTCAACAGAATTACAAATCATCCCCAAATTCTCACTTCATGGAAGAATTTGGAGGATCCTGCGCCAGGTCTTTACTCTCTTGAGCCAGACCCAGAGGAAAGAAGTTCATATATCTTATTGTGGAATAGGTCTAGAAAGTATTGGACCAGCGGACCATGGGATGAAAGTTCGCACATTTTCAACCAAATTCCTGAAATGAGGATAGTTTCTATCTACAATTATACTTATGTTACGAATGAGAATGAAAGTTATTTCACATATTCTCCTAACAATCCTAAAATTGTATCTCAATTCTTGTTGTCTGCCTCGGGAAAGATTCAGCAACGAACATGGTTGGAGAATTCCAAGCAGTGGAATTTGTTTTGGTCTCAACCAAGACAGTGTGATGTTTATGCTTCTTGTGGGACTTTCTCCAGTTGCAAACCCACATCCTTGAACTACTGCAAATGTTTGAAGGGCTTTGTGCCAAACCTGCAGAGTGATTGGGACTCGCAGATTTATTCTGGTGGATGTTCAAGAAGAACCAGTGTGAAGTGTGGGAATGCTACGCAAGACGGGTTTCTAAAAGTAAATATGGAGTTAATGCCTGAAAATAGACAATATGAAGGTGCTCTTAGTATCGAAAGTTGTAGATCAGCCTGCTTAAATGAATGCCAGTGCACTGCTTATACTTATAGCAGCAGCGATGGATGTTCAATGTGGCATGGAGATGTCTTGAATCTGCAAGTATTAGAAGCAAATGATGGTGGAGGAATTTTATACATCAGAGCTGCAGCTTCCGACATTAAGAAAAAACGTGTAATTAAGCCGTCCCTTTTGATTGCAATAGTCGTAACAATCATTGGTTTGATTGTTGTCATTTTTGGCTATTTCTTATGGAAGAAAACTTTGGGAAATAAAAGGTACGGCTACCACTCGATTTCATCTCTTTCTATGTCTTTATCCCTCAAACGTGTTCTAACAGTATGA

Protein Analysis

445

Amino Acids

50.21

Weight (kDa)

8.48

Isoelectric Point (pI)

45.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 846
AccB7I CCANNNNNTGG 1 cut(s) 717
AciI CCGC 3 cut(s) 261, 281, 516
AclWI GGATC 2 cut(s) 416, 429
AcsI RAATTY 7 cut(s) 208, 393, 412, 552, 706, 721, 1119
AfaI GTAC 3 cut(s) 62, 240, 1271
AfiI CCNNNNNNNGG 4 cut(s) 198, 342, 431, 717
AflIII ACRYGT 2 cut(s) 1162, 1318
AjnI CCWGG 3 cut(s) 25, 349, 430
AjuI GAANNNNNNNTTGG 2 cut(s) 1238, 1270
AluBI AGCT 5 cut(s) 10, 34, 321, 1136, 1142
AluI AGCT 5 cut(s) 10, 34, 321, 1136, 1142
Alw21I GWGCWC 2 cut(s) 979, 1028
Alw26I GTCTC 1 cut(s) 738
Alw44I GTGCAC 1 cut(s) 1024
AlwI GGATC 2 cut(s) 416, 429
Ama87I CYCGRG 1 cut(s) 673
ApaLI GTGCAC 1 cut(s) 1024
ApeKI GCWGC 4 cut(s) 1044, 1047, 1136, 1139
ApoI RAATTY 7 cut(s) 208, 393, 412, 552, 706, 721, 1119
AspLEI GCGC 1 cut(s) 430
AspS9I GGNCC 2 cut(s) 510, 518
AsuC2I CCSGG 1 cut(s) 194
AvaI CYCGRG 1 cut(s) 673
AvaII GGWCC 2 cut(s) 510, 518
BaeGI GKGCMC 1 cut(s) 1028
BamHI GGATCC 1 cut(s) 421
BanII GRGCYC 1 cut(s) 287
Bbv12I GWGCWC 2 cut(s) 979, 1028
BbvI GCAGC 4 cut(s) 1056, 1059, 1123, 1151
BccI CCATC 3 cut(s) 152, 1046, 1103
BceAI ACGGC 2 cut(s) 1159, 1288
BciT130I CCWGG 3 cut(s) 27, 351, 432
BclI TGATCA 1 cut(s) 325
BcnI CCSGG 1 cut(s) 194
BcoDI GTCTC 1 cut(s) 738
BfaI CTAG 3 cut(s) 11, 288, 498
BfmI CTRYAG 2 cut(s) 839, 1137
BfuAI ACCTGC 1 cut(s) 846
BglI GCCNNNNNGGC 1 cut(s) 313
BisI GCNGC 4 cut(s) 1045, 1048, 1137, 1140
BlsI GCNGC 4 cut(s) 1046, 1049, 1138, 1141
Bme1390I CCNGG 4 cut(s) 27, 194, 351, 432
Bme18I GGWCC 2 cut(s) 510, 518
BmeT110I CYCGRG 1 cut(s) 673
BmgT120I GGNCC 2 cut(s) 510, 518
BmiI GGNNCC 1 cut(s) 423
BmrFI CCNGG 4 cut(s) 27, 194, 351, 432
BmsI GCATC 1 cut(s) 159
BpmI CTGGAG 1 cut(s) 763
BpuEI CTTGAG 2 cut(s) 166, 467
BpuMI CCSGG 1 cut(s) 194
BsaI GGTCTC 1 cut(s) 738
BsaJI CCNNGG 3 cut(s) 192, 521, 672
BsaXI ACNNNNNCTCC 2 cut(s) 613, 643
Bsc4I CCNNNNNNNGG 4 cut(s) 198, 342, 431, 717
Bse1I ACTGG 4 cut(s) 119, 780, 891, 1021
BseBI CCWGG 3 cut(s) 27, 351, 432
BseDI CCNNGG 3 cut(s) 192, 521, 672
BseGI GGATG 6 cut(s) 328, 385, 532, 794, 881, 1061
BseLI CCNNNNNNNGG 4 cut(s) 198, 342, 431, 717
BseMII CTCAG 1 cut(s) 72
BseNI ACTGG 4 cut(s) 119, 780, 891, 1021
BseSI GKGCMC 1 cut(s) 1028
BseXI GCAGC 4 cut(s) 1056, 1059, 1123, 1151
BsiHKAI GWGCWC 2 cut(s) 979, 1028
BsiHKCI CYCGRG 1 cut(s) 673
BsiSI CCGG 1 cut(s) 194
BslFI GGGAC 3 cut(s) 784, 866, 1162
BslI CCNNNNNNNGG 4 cut(s) 198, 342, 431, 717
BsmAI GTCTC 1 cut(s) 738
BsmFI GGGAC 3 cut(s) 784, 866, 1162
BsmI GAATGC 2 cut(s) 913, 1022
Bso31I GGTCTC 1 cut(s) 738
BsoBI CYCGRG 1 cut(s) 673
Bsp1286I GDGCHC 3 cut(s) 287, 979, 1028
Bsp1407I TGTACA 1 cut(s) 238
Bsp143I GATC 3 cut(s) 325, 421, 998
Bsp19I CCATGG 1 cut(s) 521
BspACI CCGC 3 cut(s) 261, 281, 516
BspCNI CTCAG 1 cut(s) 73
BspLI GGNNCC 1 cut(s) 423
BspMAI CTGCAG 2 cut(s) 843, 1141
BspMI ACCTGC 1 cut(s) 846
BspPI GGATC 2 cut(s) 416, 429
BspTNI GGTCTC 1 cut(s) 738
BsrGI TGTACA 1 cut(s) 238
BsrI ACTGG 4 cut(s) 119, 780, 891, 1021
BssECI CCNNGG 3 cut(s) 192, 521, 672
BssMI GATC 3 cut(s) 325, 421, 998
BssT1I CCWWGG 1 cut(s) 521
Bst2UI CCWGG 3 cut(s) 27, 351, 432
Bst4CI ACNGT 3 cut(s) 91, 747, 1330
BstAUI TGTACA 1 cut(s) 238
BstC8I GCNNGC 2 cut(s) 283, 1006
BstDEI CTNAG 3 cut(s) 81, 154, 980
BstDSI CCRYGG 1 cut(s) 521
BstENI CCTNNNNNAGG 1 cut(s) 429
BstF5I GGATG 6 cut(s) 328, 385, 532, 794, 881, 1061
BstHHI GCGC 1 cut(s) 430
BstKTI GATC 3 cut(s) 328, 424, 1001
BstMAI GTCTC 1 cut(s) 738
BstMBI GATC 3 cut(s) 325, 421, 998
BstMWI GCNNNNNNNGC 2 cut(s) 313, 838
BstNI CCWGG 3 cut(s) 27, 351, 432
BstSCI CCNGG 4 cut(s) 25, 192, 349, 430
BstSFI CTRYAG 2 cut(s) 839, 1137
BstSLI GKGCMC 1 cut(s) 1028
BstV1I GCAGC 4 cut(s) 1056, 1059, 1123, 1151
BstX2I RGATCY 1 cut(s) 421
BstYI RGATCY 1 cut(s) 421
BtgI CCRYGG 1 cut(s) 521
BtgZI GCGATG 1 cut(s) 1065
BtsCI GGATG 6 cut(s) 328, 385, 532, 794, 881, 1061
BtsI GCAGTG 2 cut(s) 722, 1026
BtsIMutI CAGTG 5 cut(s) 722, 752, 898, 1026, 1028
BveI ACCTGC 1 cut(s) 846
Cac8I GCNNGC 2 cut(s) 283, 1006
CfoI GCGC 1 cut(s) 430
Cfr13I GGNCC 2 cut(s) 510, 518
CsiI ACCWGGT 1 cut(s) 25
Csp6I GTAC 3 cut(s) 61, 239, 1270
CviAII CATG 4 cut(s) 405, 522, 696, 1070
CviQI GTAC 3 cut(s) 61, 239, 1270
DdeI CTNAG 3 cut(s) 81, 154, 980
DpnI GATC 3 cut(s) 327, 423, 1000
DpnII GATC 3 cut(s) 325, 421, 998
DraI TTTAAA 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 521
Eco24I GRGCYC 1 cut(s) 287
Eco31I GGTCTC 1 cut(s) 738
Eco47I GGWCC 2 cut(s) 510, 518
Eco88I CYCGRG 1 cut(s) 673
EcoNI CCTNNNNNAGG 1 cut(s) 429
EcoRI GAATTC 1 cut(s) 706
EcoRII CCWGG 3 cut(s) 25, 349, 430
EcoT14I CCWWGG 1 cut(s) 521
EcoT38I GRGCYC 1 cut(s) 287
ErhI CCWWGG 1 cut(s) 521
FaeI CATG 4 cut(s) 408, 525, 699, 1073
FalI AAGNNNNNCTT 4 cut(s) 234, 266, 963, 995
FaqI GGGAC 3 cut(s) 784, 866, 1162
FatI CATG 4 cut(s) 404, 521, 695, 1069
FauI CCCGC 1 cut(s) 274
FauNDI CATATG 1 cut(s) 56
FbaI TGATCA 1 cut(s) 325
Fnu4HI GCNGC 4 cut(s) 1045, 1048, 1137, 1140
FokI GGATG 6 cut(s) 315, 372, 539, 781, 888, 1068
FriOI GRGCYC 1 cut(s) 287
Fsp4HI GCNGC 4 cut(s) 1045, 1048, 1137, 1140
FspBI CTAG 3 cut(s) 11, 288, 498
GlaI GCGC 1 cut(s) 429
GluI GCNGC 4 cut(s) 1045, 1048, 1137, 1140
GsuI CTGGAG 1 cut(s) 763
HapII CCGG 1 cut(s) 194
HhaI GCGC 1 cut(s) 430
Hin1II CATG 4 cut(s) 408, 525, 699, 1073
Hin6I GCGC 1 cut(s) 428
HinP1I GCGC 1 cut(s) 428
HincII GTYRAC 1 cut(s) 204
HindII GTYRAC 1 cut(s) 204
HindIII AAGCTT 1 cut(s) 319
HinfI GANTC 5 cut(s) 182, 366, 682, 854, 1084
HpaII CCGG 1 cut(s) 194
Hpy166II GTNNAC 2 cut(s) 204, 1026
Hpy188I TCNGA 4 cut(s) 82, 304, 1133, 1147
Hpy188III TCNNGA 9 cut(s) 145, 175, 274, 446, 498, 557, 675, 882, 1081
Hpy8I GTNNAC 2 cut(s) 204, 1026
HpyAV CCTTC 2 cut(s) 814, 965
HpyCH4III ACNGT 3 cut(s) 91, 747, 1330
HpyCH4IV ACGT 2 cut(s) 1162, 1318
HpyCH4V TGCA 7 cut(s) 786, 810, 841, 1026, 1090, 1139, 1190
HpyF10VI GCNNNNNNNGC 2 cut(s) 313, 838
HpyF3I CTNAG 3 cut(s) 81, 154, 980
HpySE526I ACGT 2 cut(s) 1162, 1318
Hsp92II CATG 4 cut(s) 408, 525, 699, 1073
HspAI GCGC 1 cut(s) 428
Ksp22I TGATCA 1 cut(s) 325
Kzo9I GATC 3 cut(s) 325, 421, 998
Lsp1109I GCAGC 4 cut(s) 1056, 1059, 1123, 1151
LweI GCATC 1 cut(s) 159
MabI ACCWGGT 1 cut(s) 25
MaeI CTAG 3 cut(s) 11, 288, 498
MaeII ACGT 2 cut(s) 1162, 1318
MaeIII GTNAC 2 cut(s) 595, 1198
MalI GATC 3 cut(s) 327, 423, 1000
MboI GATC 3 cut(s) 325, 421, 998
MboII GAAGA 5 cut(s) 10, 129, 421, 897, 1258
MflI RGATCY 1 cut(s) 421
MhlI GDGCHC 3 cut(s) 287, 979, 1028
MlyI GAGTC 2 cut(s) 191, 848
MmeI TCCRAC 3 cut(s) 356, 681, 1170
MnlI CCTC 7 cut(s) 347, 412, 454, 558, 682, 1109, 1322
MseI TTAA 5 cut(s) 212, 947, 1010, 1152, 1170
MslI CAYNNNNRTG 1 cut(s) 1074
MspA1I CMGCKG 1 cut(s) 516
MspI CCGG 1 cut(s) 194
MspR9I CCNGG 4 cut(s) 27, 194, 351, 432
Mva1269I GAATGC 2 cut(s) 913, 1022
MvaI CCWGG 3 cut(s) 27, 351, 432
MwoI GCNNNNNNNGC 2 cut(s) 313, 838
NciI CCSGG 1 cut(s) 194
NcoI CCATGG 1 cut(s) 521
NdeI CATATG 1 cut(s) 56
NdeII GATC 3 cut(s) 325, 421, 998
NlaIII CATG 4 cut(s) 408, 525, 699, 1073
NlaIV GGNNCC 1 cut(s) 423
PctI GAATGC 2 cut(s) 913, 1022
PfeI GAWTC 3 cut(s) 366, 682, 1084
PflMI CCANNNNNTGG 1 cut(s) 717
PkrI GCNGC 4 cut(s) 1046, 1049, 1138, 1141
PleI GAGTC 2 cut(s) 190, 848
PpsI GAGTC 2 cut(s) 190, 848
Psp6I CCWGG 3 cut(s) 25, 349, 430
PspGI CCWGG 3 cut(s) 25, 349, 430
PspN4I GGNNCC 1 cut(s) 423
PspPI GGNCC 2 cut(s) 510, 518
PstI CTGCAG 2 cut(s) 843, 1141
PsuI RGATCY 1 cut(s) 421
RsaI GTAC 3 cut(s) 62, 240, 1271
RsaNI GTAC 3 cut(s) 61, 239, 1270
RseI CAYNNNNRTG 1 cut(s) 1074
SaqAI TTAA 5 cut(s) 212, 947, 1010, 1152, 1170
SatI GCNGC 4 cut(s) 1045, 1048, 1137, 1140
Sau3AI GATC 3 cut(s) 325, 421, 998
Sau96I GGNCC 2 cut(s) 510, 518
SchI GAGTC 2 cut(s) 191, 848
ScrFI CCNGG 4 cut(s) 27, 194, 351, 432
SduI GDGCHC 3 cut(s) 287, 979, 1028
SexAI ACCWGGT 1 cut(s) 25
SfaNI GCATC 1 cut(s) 159
SfcI CTRYAG 2 cut(s) 839, 1137
SinI GGWCC 2 cut(s) 510, 518
SmiMI CAYNNNNRTG 1 cut(s) 1074
SmlI CTYRAG 2 cut(s) 145, 446
SmoI CTYRAG 2 cut(s) 145, 446
SsiI CCGC 3 cut(s) 261, 281, 516
SspMI CTAG 3 cut(s) 11, 288, 498
StyD4I CCNGG 4 cut(s) 25, 192, 349, 430
StyI CCWWGG 1 cut(s) 521
TaaI ACNGT 3 cut(s) 91, 747, 1330
TaiI ACGT 2 cut(s) 1165, 1321
TaqI TCGA 2 cut(s) 987, 1283
TaqII GACCGA 1 cut(s) 130
TatI WGTACW 1 cut(s) 238
TfiI GAWTC 3 cut(s) 366, 682, 1084
Tru1I TTAA 5 cut(s) 212, 947, 1010, 1152, 1170
Tru9I TTAA 5 cut(s) 212, 947, 1010, 1152, 1170
TscAI CASTG 5 cut(s) 722, 752, 898, 1028, 1033
TseI GCWGC 4 cut(s) 1044, 1047, 1136, 1139
TspDTI ATGAA 7 cut(s) 393, 462, 543, 624, 984, 1029, 1278
TspRI CASTG 5 cut(s) 722, 752, 898, 1028, 1033
Van91I CCANNNNNTGG 1 cut(s) 717
VneI GTGCAC 1 cut(s) 1024
VpaK11BI GGWCC 2 cut(s) 510, 518
XagI CCTNNNNNAGG 1 cut(s) 429
XapI RAATTY 7 cut(s) 208, 393, 412, 552, 706, 721, 1119
XbaI TCTAGA 1 cut(s) 497
XcmI CCANNNNNNNNNTGG 1 cut(s) 339
XspI CTAG 3 cut(s) 11, 288, 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.