RchiOBHm_Chr2g0160651

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000564
Physical Location & Seq
Forward (+)
76503555 .. 76507068
3514 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52908

Sequence Viewer

Length: 2604 bp
ATGGTTGTGGGGAGCTGTACACCCGCCCAACTCCTACAAATTTGCTTGTCTGCAAGTTTTTTATGCAGCCAATCCATGGATACCAAAACCAACCTAATGAAGTCCATGGTTTCTGTTCTTTTGTTATGCCTATCTCTCAAAACTCATATCTCTCTTGCCGCTGACACCATCACTGTAAACCAATCTCTCTCTGGTGATCAAACCATTGTTTCAGCAGGTGGAGTTTTTGAACTGGGTTTCTTCAATCCAGGTAACTCAAAGTACTATATAGGCATTTGGTACAGGAGAAGTCCAAGAAACGTTGTCTGGGTGGCGAATAGGGAGCAACCAGTCTCCGACGCGTCATCAGAATTGAGGATCTCAGATGGTAATTTGGTTCTGTTTAGTGAGTCCAAAAGTCCAATTTGGTCCACAAATGTCTCCACATCAGGTACATCTGTTCACGCAGTTCTTTTTGATAACGGGAACCTTGTTTTAAGAGCTGGGAATTCATCCCAGCCTTTATGGCAGAGTTTTGATCACCCAACTGACACTTTGCTAGCAGAAGGTAGAATTGGGTTCAGTTCTATTACTAAACAAAAACAAAGTTTGACTTCATGGAAGAGTTTAGAGGATCCTGCACCAGGTCTCTATTCTATTGAGCTAGACCCAAATGAAACCAGCTCATACATTGAGTTGTGGAATGGGTCTAGACAGTATTGGACCAGTGGACCATGGGATGTAAAGACTCGGAGATTCAGTTTGATTCCTGAGATGAGGCTTAATTACATCTTCAATTTCAGCTATGTGACAAACAAAAACGAAAGCTATTTCACCTATTCTCTTTATGATCCTACAATCTTGTCTAGATGTCTGATCGATGTCTCGGGGCAGGTTAAGCAACTGTCATGGTTGAGATCTTCCATAGACTGGGATTTGTTTTGGTCTCAACCAAGACAACAATGCAAAGTCTATGCCTTTTGTGGGGCTTTTGGCAATTGCAATGAGAAGTCCTCACCCTTCTGTAATTGTTTGACTGGTTTTGAGCCGAAATCGAAGGTGGATTGGGATTTGCAGGATTATTCTGGTGGTTGTTCAAGAAGAACTGATCTGTATTCTGGGAATGCTACCAGTGATAATGCGGAAAAAGACCGATTTCTAGACATGCCTAGCATGTCATTACCTGAAAATCAAGAGTCTGTAGATGCTGCGAGTATTGTTCAATGTGAATCAATCTGCTTAAATAACCAATCTTGCACTGCTTATGCTTATGACAGCAATGGATGCCGAATTTGGATTGGAGATCTCTTCAATCTGGAACAACTCACGGGAGATGACAGTAATGGAACAACATTGTACCTCAGACTTGCAGCTTCCGAGTGGGTGATCATTACTAGGAAACACCATTTTTATTGTTCGTTTCTTTTCTTTGCAGGTGCCAAGAGTCATGCTAATAAGCGGTCCCTTATAATTGCAACAGTCTCAGCAACAGCAGGATTGCTTATAGTAATTGTTGGCTGCATCTTTTGGAAGAAAACTTTGGGAAAGAGAAGGGGGCGTAGAAGGAAGTACGATGAGACTATAAGTAATGTTGGTGCAAAGAATGATGCAGAACTACCAGTCTATAGTTTAAAGAGCATATTAGTTGCTACAAACAACTTCTCTGAAACTAATAAACTGGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGTATTTTAACTGAAAGTCAAGAAGTAGCCATAAAAAGGCTATCAAAGAAGTCTGGGCAAGGACATCAGGAGTTCATGAATGAGTTGAAACTCATAGCCAAGCTCCAACACACCAATCTTGTTAGGCTCTTGGGTTGCTGTATTGAAGAGGGGGAAATGATACTGATCTATGAGTACATGCCTAATCGAAGTCTGGACAAATTCTTGTTTGATGCATCTGAAAACACAAAATTGGATTGGGATAAACGCTTTCAAATTATAGAGGGTGTTGCTCAAGGAGTTCTATATATCCACAAGTACTCTAGACTGAAAATAATTCATAGGGACTTAAAAACAAGTAATGTTCTGTTGGATGACACAATGAAGCCCAGAATTTCAGACTTTGGAATGGCAAGAATTTTCGGAATAAATCAAACTGAAGCAAATACCAACAGGGTTGTTGGGACATATGGATACATGGCACCAGAATATGGACTTTATGGTCAATTTTCTGAGAAGTCAGATGTATTTAGCTATGGGGTGTTGTTGCTAGAGATTGTGAGCGGAAAGAGGAGTGGTAGTTTTTACCATGTTGAACAAGTAGTCACTCTTGCTGGATGGGCATGGGAATTATGGAAAGAAGGTAAAGGAATGGAGGTGATTGATGCATCCATAAGGGAAACATGTCGGCCTCATGAAGCTTTAAGGTGTATCTATGTTGGTTTCTTGTGTCTTCAACAATCTCCTGCTGATCGACCGACTATGTCTTCGGTAATTCATATGCTGCAAGCCAGTGACGCAACATCACTCCCACCCTCCAAAGAACCTGCTTTTTCTACTGATATTAGGAATTCTAGTGCCCGTGGTTCTTCCTCCGAAACATCTACCAGATTTTCCAACAATGAAGTCACCATTAGCTTGCCAGAAGCTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

867

Amino Acids

97.04

Weight (kDa)

6.89

Isoelectric Point (pI)

47.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 101 - 201 1.9e-33 D-mannose binding lectin
S_locus_glycop PF00954 234 - 345 2e-30 S-locus glycoprotein domain
PAN_2 PF08276 375 - 431 2e-13 PAN-like domain
Pkinase PF00069 548 - 815 8e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 550 - 817 1.3e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1448, 1686
AarI CACCTGC 2 cut(s) 206, 1403
AasI GACNNNNNNGTC 1 cut(s) 2169
Acc36I ACCTGC 4 cut(s) 206, 862, 1403, 2503
AccB1I GGYRCC 2 cut(s) 1415, 2149
AccB7I CCANNNNNTGG 3 cut(s) 76, 909, 2159
AccBSI CCGCTC 1 cut(s) 2232
AccII CGCG 1 cut(s) 341
AciI CCGC 5 cut(s) 24, 159, 1121, 1438, 2232
AclI AACGTT 1 cut(s) 300
AclWI GGATC 4 cut(s) 365, 608, 621, 824
AcsI RAATTY 7 cut(s) 39, 487, 1269, 1889, 2061, 2085, 2518
AcuI CTGAAG 1 cut(s) 2127
AfaI GTAC 8 cut(s) 19, 263, 281, 433, 1337, 1550, 1865, 1988
AfiI CCNNNNNNNGG 6 cut(s) 76, 623, 909, 963, 1725, 2159
AflIII ACRYGT 2 cut(s) 339, 2351
AjnI CCWGG 2 cut(s) 247, 622
AjuI GAANNNNNNNTTGG 4 cut(s) 537, 569, 1502, 1534
Alw26I GTCTC 7 cut(s) 337, 424, 632, 868, 930, 1465, 1550
AlwI GGATC 4 cut(s) 365, 608, 621, 824
Ama87I CYCGRG 1 cut(s) 865
AoxI GGCC 2 cut(s) 1675, 2357
ApeKI GCWGC 5 cut(s) 66, 1187, 1349, 1497, 2452
ApoI RAATTY 7 cut(s) 39, 487, 1269, 1889, 2061, 2085, 2518
ArsI GACNNNNNNTTYG 2 cut(s) 2419, 2451
AspS9I GGNCC 5 cut(s) 408, 702, 710, 1440, 1676
AsuHPI GGTGA 7 cut(s) 206, 512, 805, 987, 1375, 2338, 2569
AsuNHI GCTAGC 1 cut(s) 538
AvaI CYCGRG 1 cut(s) 865
AvaII GGWCC 4 cut(s) 408, 702, 710, 1440
BaeGI GKGCMC 1 cut(s) 2530
BaeI ACNNNNGTAYC 2 cut(s) 423, 456
BamHI GGATCC 1 cut(s) 613
BanI GGYRCC 2 cut(s) 1415, 2149
BbsI GAAGAC 2 cut(s) 2393, 2427
BbvI GCAGC 5 cut(s) 78, 1174, 1361, 1484, 2439
BccI CCATC 3 cut(s) 176, 359, 2280
BciT130I CCWGG 2 cut(s) 249, 624
BciVI GTATCC 2 cut(s) 73, 2135
BclI TGATCA 3 cut(s) 196, 517, 1365
BcoDI GTCTC 7 cut(s) 337, 424, 632, 868, 930, 1465, 1550
BfmI CTRYAG 2 cut(s) 1179, 1603
BfuAI ACCTGC 4 cut(s) 206, 862, 1403, 2503
BfuI GTATCC 2 cut(s) 73, 2135
BglI GCCNNNNNGGC 1 cut(s) 505
BglII AGATCT 2 cut(s) 896, 1282
BisI GCNGC 6 cut(s) 67, 159, 1188, 1350, 1498, 2453
BlsI GCNGC 6 cut(s) 68, 160, 1189, 1351, 1499, 2454
BmcAI AGTACT 2 cut(s) 263, 1988
Bme1390I CCNGG 2 cut(s) 249, 624
Bme18I GGWCC 4 cut(s) 408, 702, 710, 1440
BmeT110I CYCGRG 1 cut(s) 865
BmgT120I GGNCC 5 cut(s) 408, 702, 710, 1440, 1676
BmiI GGNNCC 5 cut(s) 467, 615, 1417, 1442, 2151
BmrFI CCNGG 2 cut(s) 249, 624
BmrI ACTGGG 3 cut(s) 242, 919, 1667
BmsI GCATC 8 cut(s) 1174, 1253, 1509, 1576, 1891, 1913, 2323, 2345
BmtI GCTAGC 1 cut(s) 542
BmuI ACTGGG 3 cut(s) 242, 919, 1667
BpiI GAAGAC 2 cut(s) 2393, 2427
BplI GAGNNNNNCTC 2 cut(s) 977, 1009
BpuEI CTTGAG 1 cut(s) 1947
Bsa29I ATCGAT 1 cut(s) 858
BsaBI GATNNNNATC 1 cut(s) 1853
BsaI GGTCTC 2 cut(s) 632, 930
BsaJI CCNNGG 4 cut(s) 75, 105, 713, 2530
BsaXI ACNNNNNCTCC 4 cut(s) 724, 754, 2233, 2263
Bsc4I CCNNNNNNNGG 6 cut(s) 76, 623, 909, 963, 1725, 2159
Bse1I ACTGG 9 cut(s) 237, 329, 705, 914, 1021, 1110, 1598, 1662, 2460
Bse3DI GCAATG 2 cut(s) 988, 1264
Bse8I GATNNNNATC 1 cut(s) 1853
BseBI CCWGG 2 cut(s) 249, 624
BseCI ATCGAT 1 cut(s) 858
BseDI CCNNGG 4 cut(s) 75, 105, 713, 2530
BseGI GGATG 6 cut(s) 491, 724, 1268, 2047, 2291, 2336
BseJI GATNNNNATC 1 cut(s) 1853
BseLI CCNNNNNNNGG 6 cut(s) 76, 623, 909, 963, 1725, 2159
BseMI GCAATG 2 cut(s) 988, 1264
BseMII CTCAG 5 cut(s) 375, 741, 1354, 1476, 2172
BseNI ACTGG 9 cut(s) 237, 329, 705, 914, 1021, 1110, 1598, 1662, 2460
BseRI GAGGAG 1 cut(s) 2254
BseSI GKGCMC 1 cut(s) 2530
BseXI GCAGC 5 cut(s) 78, 1174, 1361, 1484, 2439
BseYI CCCAGC 2 cut(s) 482, 495
BsgI GTGCAG 1 cut(s) 603
Bsh1236I CGCG 1 cut(s) 341
Bsh1285I CGRYCG 1 cut(s) 2426
BshFI GGCC 2 cut(s) 1677, 2359
BshNI GGYRCC 2 cut(s) 1415, 2149
BshVI ATCGAT 1 cut(s) 858
BsiEI CGRYCG 1 cut(s) 2426
BsiHKCI CYCGRG 1 cut(s) 865
BslFI GGGAC 3 cut(s) 1426, 2027, 2146
BslI CCNNNNNNNGG 6 cut(s) 76, 623, 909, 963, 1725, 2159
BsmAI GTCTC 7 cut(s) 337, 424, 632, 868, 930, 1465, 1550
BsmFI GGGAC 3 cut(s) 1426, 2027, 2146
BsmI GAATGC 1 cut(s) 1108
BsnI GGCC 2 cut(s) 1677, 2359
Bso31I GGTCTC 2 cut(s) 632, 930
BsoBI CYCGRG 1 cut(s) 865
Bsp1286I GDGCHC 1 cut(s) 2530
Bsp1407I TGTACA 1 cut(s) 17
Bsp19I CCATGG 3 cut(s) 75, 105, 713
BspACI CCGC 5 cut(s) 24, 159, 1121, 1438, 2232
BspANI GGCC 2 cut(s) 1677, 2359
BspCNI CTCAG 5 cut(s) 374, 742, 1353, 1475, 2173
BspDI ATCGAT 1 cut(s) 858
BspFNI CGCG 1 cut(s) 341
BspHI TCATGA 2 cut(s) 1764, 2362
BspLI GGNNCC 5 cut(s) 467, 615, 1417, 1442, 2151
BspMI ACCTGC 4 cut(s) 206, 862, 1403, 2503
BspOI GCTAGC 1 cut(s) 542
BspPI GGATC 4 cut(s) 365, 608, 621, 824
BspT107I GGYRCC 2 cut(s) 1415, 2149
BspTNI GGTCTC 2 cut(s) 632, 930
BsrBI CCGCTC 1 cut(s) 2232
BsrDI GCAATG 2 cut(s) 988, 1264
BsrGI TGTACA 1 cut(s) 17
BsrI ACTGG 9 cut(s) 237, 329, 705, 914, 1021, 1110, 1598, 1662, 2460
BssECI CCNNGG 4 cut(s) 75, 105, 713, 2530
BssT1I CCWWGG 3 cut(s) 75, 105, 713
Bst2UI CCWGG 2 cut(s) 249, 624
Bst4CI ACNGT 5 cut(s) 175, 696, 885, 1319, 1459
Bst6I CTCTTC 3 cut(s) 596, 1292, 1830
BstAPI GCANNNNNTGC 1 cut(s) 1263
BstAUI TGTACA 1 cut(s) 17
BstC8I GCNNGC 3 cut(s) 540, 2457, 2588
BstDEI CTNAG 5 cut(s) 361, 750, 1340, 1462, 2181
BstDSI CCRYGG 4 cut(s) 75, 105, 713, 2530
BstENI CCTNNNNNAGG 1 cut(s) 621
BstF5I GGATG 6 cut(s) 491, 724, 1268, 2047, 2291, 2336
BstFNI CGCG 1 cut(s) 341
BstMAI GTCTC 7 cut(s) 337, 424, 632, 868, 930, 1465, 1550
BstMCI CGRYCG 1 cut(s) 2426
BstMWI GCNNNNNNNGC 5 cut(s) 505, 877, 1263, 2288, 2465
BstNI CCWGG 2 cut(s) 249, 624
BstNSI RCATGY 4 cut(s) 1147, 1156, 1870, 2355
BstSCI CCNGG 2 cut(s) 247, 622
BstSFI CTRYAG 2 cut(s) 1179, 1603
BstSLI GKGCMC 1 cut(s) 2530
BstUI CGCG 1 cut(s) 341
BstV1I GCAGC 5 cut(s) 78, 1174, 1361, 1484, 2439
BstV2I GAAGAC 2 cut(s) 2393, 2427
BstX2I RGATCY 4 cut(s) 357, 613, 896, 1282
BstYI RGATCY 4 cut(s) 357, 613, 896, 1282
Bsu15I ATCGAT 1 cut(s) 858
BsuI GTATCC 2 cut(s) 73, 2135
BsuRI GGCC 2 cut(s) 1677, 2359
BsuTUI ATCGAT 1 cut(s) 858
BtgI CCRYGG 4 cut(s) 75, 105, 713, 2530
BtsCI GGATG 6 cut(s) 491, 724, 1268, 2047, 2291, 2336
BtsI GCAGTG 1 cut(s) 1236
BtsIMutI CAGTG 5 cut(s) 171, 712, 1117, 1236, 2467
BveI ACCTGC 4 cut(s) 206, 862, 1403, 2503
Cac8I GCNNGC 3 cut(s) 540, 2457, 2588
CciI TCATGA 2 cut(s) 1764, 2362
Cfr13I GGNCC 5 cut(s) 408, 702, 710, 1440, 1676
ClaI ATCGAT 1 cut(s) 858
CseI GACGC 3 cut(s) 330, 347, 2474
CsiI ACCWGGT 1 cut(s) 622
Csp6I GTAC 8 cut(s) 18, 262, 280, 432, 1336, 1549, 1864, 1987
CviQI GTAC 8 cut(s) 18, 262, 280, 432, 1336, 1549, 1864, 1987
DdeI CTNAG 5 cut(s) 361, 750, 1340, 1462, 2181
DraI TTTAAA 1 cut(s) 1611
DrdI GACNNNNNNGTC 1 cut(s) 2169
DseDI GACNNNNNNGTC 1 cut(s) 2169
Eam1104I CTCTTC 3 cut(s) 596, 1292, 1830
EarI CTCTTC 3 cut(s) 596, 1292, 1830
Eco130I CCWWGG 3 cut(s) 75, 105, 713
Eco31I GGTCTC 2 cut(s) 632, 930
Eco47I GGWCC 4 cut(s) 408, 702, 710, 1440
Eco57I CTGAAG 1 cut(s) 2127
Eco88I CYCGRG 1 cut(s) 865
EcoNI CCTNNNNNAGG 1 cut(s) 621
EcoRI GAATTC 2 cut(s) 487, 2518
EcoRII CCWGG 2 cut(s) 247, 622
EcoT14I CCWWGG 3 cut(s) 75, 105, 713
EcoT22I ATGCAT 2 cut(s) 1906, 2338
ErhI CCWWGG 3 cut(s) 75, 105, 713
FalI AAGNNNNNCTT 2 cut(s) 577, 609
FaqI GGGAC 3 cut(s) 1426, 2027, 2146
FauI CCCGC 1 cut(s) 31
FauNDI CATATG 2 cut(s) 2137, 2448
FbaI TGATCA 3 cut(s) 196, 517, 1365
Fnu4HI GCNGC 6 cut(s) 67, 159, 1188, 1350, 1498, 2453
FokI GGATG 6 cut(s) 478, 731, 1275, 2054, 2298, 2323
Fsp4HI GCNGC 6 cut(s) 67, 159, 1188, 1350, 1498, 2453
GluI GCNGC 6 cut(s) 67, 159, 1188, 1350, 1498, 2453
GsaI CCCAGC 2 cut(s) 486, 499
HaeIII GGCC 2 cut(s) 1677, 2359
HgaI GACGC 3 cut(s) 330, 347, 2474
HindIII AAGCTT 1 cut(s) 2367
HinfI GANTC 7 cut(s) 389, 727, 735, 745, 1175, 1208, 1423
HphI GGTGA 7 cut(s) 206, 512, 805, 987, 1375, 2338, 2569
Hpy166II GTNNAC 5 cut(s) 20, 178, 411, 442, 710
Hpy8I GTNNAC 5 cut(s) 20, 178, 411, 442, 710
Hpy99I CGWCG 1 cut(s) 341
HpyAV CCTTC 6 cut(s) 539, 1009, 1030, 1524, 1536, 2303
HpyCH4III ACNGT 5 cut(s) 175, 696, 885, 1319, 1459
HpyCH4IV ACGT 1 cut(s) 300
HpyF10VI GCNNNNNNNGC 5 cut(s) 505, 877, 1263, 2288, 2465
HpyF3I CTNAG 5 cut(s) 361, 750, 1340, 1462, 2181
HpySE526I ACGT 1 cut(s) 300
Ksp22I TGATCA 3 cut(s) 196, 517, 1365
LmnI GCTCC 3 cut(s) 12, 322, 1797
Lsp1109I GCAGC 5 cut(s) 78, 1174, 1361, 1484, 2439
LweI GCATC 8 cut(s) 1174, 1253, 1509, 1576, 1891, 1913, 2323, 2345
MabI ACCWGGT 1 cut(s) 622
MaeII ACGT 1 cut(s) 300
MaeIII GTNAC 5 cut(s) 251, 787, 2272, 2462, 2575
MbiI CCGCTC 1 cut(s) 2232
MfeI CAATTG 1 cut(s) 976
MflI RGATCY 4 cut(s) 357, 613, 896, 1282
MhlI GDGCHC 1 cut(s) 2530
MluI ACGCGT 1 cut(s) 339
MlyI GAGTC 4 cut(s) 398, 721, 1184, 1432
MmeI TCCRAC 4 cut(s) 360, 1819, 2019, 2589
Mph1103I ATGCAT 2 cut(s) 1906, 2338
MseI TTAA 8 cut(s) 476, 762, 876, 1220, 1610, 1697, 2018, 2372
MspA1I CMGCKG 1 cut(s) 161
MspR9I CCNGG 2 cut(s) 249, 624
MunI CAATTG 1 cut(s) 976
Mva1269I GAATGC 1 cut(s) 1108
MvaI CCWGG 2 cut(s) 249, 624
MvnI CGCG 1 cut(s) 341
MwoI GCNNNNNNNGC 5 cut(s) 505, 877, 1263, 2288, 2465
NcoI CCATGG 3 cut(s) 75, 105, 713
NdeI CATATG 2 cut(s) 2137, 2448
NheI GCTAGC 1 cut(s) 538
NlaIV GGNNCC 5 cut(s) 467, 615, 1417, 1442, 2151
NmuCI GTSAC 4 cut(s) 787, 2272, 2462, 2575
NsiI ATGCAT 2 cut(s) 1906, 2338
NspI RCATGY 4 cut(s) 1147, 1156, 1870, 2355
PagI TCATGA 2 cut(s) 1764, 2362
PaqCI CACCTGC 2 cut(s) 206, 1403
PciI ACATGT 1 cut(s) 2351
PctI GAATGC 1 cut(s) 1108
PfeI GAWTC 3 cut(s) 735, 745, 1208
PflFI GACNNNGTC 1 cut(s) 2431
PflMI CCANNNNNTGG 3 cut(s) 76, 909, 2159
PkrI GCNGC 6 cut(s) 68, 160, 1189, 1351, 1499, 2454
PleI GAGTC 4 cut(s) 397, 721, 1183, 1431
PpsI GAGTC 4 cut(s) 397, 721, 1183, 1431
PscI ACATGT 1 cut(s) 2351
PsiI TTATAA 2 cut(s) 1448, 1686
Psp1406I AACGTT 1 cut(s) 300
Psp6I CCWGG 2 cut(s) 247, 622
PspFI CCCAGC 2 cut(s) 482, 495
PspGI CCWGG 2 cut(s) 247, 622
PspN4I GGNNCC 5 cut(s) 467, 615, 1417, 1442, 2151
PspPI GGNCC 5 cut(s) 408, 702, 710, 1440, 1676
PsuI RGATCY 4 cut(s) 357, 613, 896, 1282
PsyI GACNNNGTC 1 cut(s) 2431
RsaI GTAC 8 cut(s) 19, 263, 281, 433, 1337, 1550, 1865, 1988
RsaNI GTAC 8 cut(s) 18, 262, 280, 432, 1336, 1549, 1864, 1987
SaqAI TTAA 8 cut(s) 476, 762, 876, 1220, 1610, 1697, 2018, 2372
SatI GCNGC 6 cut(s) 67, 159, 1188, 1350, 1498, 2453
Sau96I GGNCC 5 cut(s) 408, 702, 710, 1440, 1676
ScaI AGTACT 2 cut(s) 263, 1988
SchI GAGTC 4 cut(s) 398, 721, 1184, 1432
ScrFI CCNGG 2 cut(s) 249, 624
SduI GDGCHC 1 cut(s) 2530
SexAI ACCWGGT 1 cut(s) 622
SfaNI GCATC 8 cut(s) 1174, 1253, 1509, 1576, 1891, 1913, 2323, 2345
SfcI CTRYAG 2 cut(s) 1179, 1603
SinI GGWCC 4 cut(s) 408, 702, 710, 1440
SmlI CTYRAG 1 cut(s) 1962
SmoI CTYRAG 1 cut(s) 1962
SsiI CCGC 5 cut(s) 24, 159, 1121, 1438, 2232
StyD4I CCNGG 2 cut(s) 247, 622
StyI CCWWGG 3 cut(s) 75, 105, 713
TaaI ACNGT 5 cut(s) 175, 696, 885, 1319, 1459
TaiI ACGT 1 cut(s) 303
TaqI TCGA 4 cut(s) 858, 1034, 1876, 2422
TaqII GACCGA 2 cut(s) 1146, 2440
TatI WGTACW 4 cut(s) 17, 261, 1863, 1986
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 3 cut(s) 735, 745, 1208
Tru1I TTAA 8 cut(s) 476, 762, 876, 1220, 1610, 1697, 2018, 2372
Tru9I TTAA 8 cut(s) 476, 762, 876, 1220, 1610, 1697, 2018, 2372
TscAI CASTG 5 cut(s) 178, 712, 1117, 1243, 2467
TseFI GTSAC 4 cut(s) 787, 2272, 2462, 2575
TseI GCWGC 5 cut(s) 66, 1187, 1349, 1497, 2452
Tsp45I GTSAC 4 cut(s) 787, 2272, 2462, 2575
TspRI CASTG 5 cut(s) 178, 712, 1117, 1243, 2467
Tth111I GACNNNGTC 1 cut(s) 2431
Van91I CCANNNNNTGG 3 cut(s) 76, 909, 2159
VpaK11BI GGWCC 4 cut(s) 408, 702, 710, 1440
XagI CCTNNNNNAGG 1 cut(s) 621
XapI RAATTY 7 cut(s) 39, 487, 1269, 1889, 2061, 2085, 2518
XbaI TCTAGA 4 cut(s) 689, 845, 1138, 1991
XceI RCATGY 4 cut(s) 1147, 1156, 1870, 2355
XcmI CCANNNNNNNNNTGG 1 cut(s) 188
ZrmI AGTACT 2 cut(s) 263, 1988
Zsp2I ATGCAT 2 cut(s) 1906, 2338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.