pycom09g01950

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
1445859 .. 1447115
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g01950.2

Sequence Viewer

Length: 1014 bp
ATGTTCAATTATAGTTATGTTACGAATGAGAACGAAAGGTATTTCACCTATTCTCTTTACGATCCAAAAACTGTATCTCGATGCTTCTTGTCTGTCTCGGGGCAGATTCAGCAACTAACATGGTTGGAGAAGCAGTGGACTTTGCTTTGGTCTCTACCATTACAACAATGTGATGTTTATGCTTTTTGTGGGGATTTCTCTAGTTGCAATCCTACATCCTCGGACAACTGCAAATGTTTGAAGGGCTTTGAGCCAAACCGGCAGAGTGATTGGGACTTGCAGATTTATTCTGGTGGGTGTTCAAGAAGAACCAGTATGCAGTGTGGGAATGCTACTAGTGCGAATGGGACGGGTGATGGGTTTTTGGGAGACGAGTTTCTAGAAATACATAGCATTTCATTGCCTGAAAATAACCAATACGGATACGTTCTTGGTATCGAAAGTTGTAGATCAGCCTGTTTAAATGAATGCCATTGCACTGCTTATGCTTATGAGAGCAACAGTTATTGTTCACTATGGCATGGAGATGTTTTTCTGCCAGAACTTGTAGCAAGTGACGGTGGTGGAAAAACTTTATATATCAGAGCTGCAGCTTCCGACATTAAGAAAAAAGGTAATAACAGAGTGATTATTCATGTCTTACGTGGAGCAATTAATCTTAATGTTGTCCCAGTGATTTTTTTTCTTTTCTTTGCAGGTTCAATTAAGCCGTCCCTTGTGATTGCAATTGTCACAACAGTCACAGGTTTGCTTCTTGTCATTTTTGGCTATTTCTTATGGAAGAAGACATTGGGAAAGAAAAGAGAGCAAAGGAATAGATATGGTGAGACTAAAAGTAAATTTGCTGCTGGAGGTGAAAAGAACGATGCAGAACTGCCGATCTTTGGTTTAAGGGCTATAATAGCTGCTACAAACAACTTCGCTGAAGCTAATAAACTCGGAGAGGGAGGATTTGGCCCTGTCTACAAGGGAATTTTGGCTGAAAATCAAGAAGTAGCCATAAAAAGGTTATAA

Protein Analysis

338

Amino Acids

37.42

Weight (kDa)

7.88

Isoelectric Point (pI)

38.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000564)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa Rorug01G0022300 Rorug04G0061600
rosa_samantha Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1012
Acc36I ACCTGC 1 cut(s) 686
AccI GTMKAC 1 cut(s) 963
AclWI GGATC 1 cut(s) 56
AcsI RAATTY 2 cut(s) 839, 972
AcuI CTGAAG 1 cut(s) 945
AfiI CCNNNNNNNGG 2 cut(s) 884, 1005
AgsI TTSAA 4 cut(s) 7, 241, 303, 702
AhlI ACTAGT 1 cut(s) 335
AjuI GAANNNNNNNTTGG 2 cut(s) 773, 805
AluBI AGCT 4 cut(s) 587, 593, 905, 929
AluI AGCT 4 cut(s) 587, 593, 905, 929
Alw26I GTCTC 4 cut(s) 100, 156, 363, 821
AlwI GGATC 1 cut(s) 56
Ama87I CYCGRG 1 cut(s) 97
AoxI GGCC 1 cut(s) 955
ApeKI GCWGC 4 cut(s) 587, 590, 845, 905
ApoI RAATTY 2 cut(s) 839, 972
AseI ATTAAT 1 cut(s) 654
AspS9I GGNCC 1 cut(s) 956
AsuHPI GGTGA 4 cut(s) 37, 365, 836, 866
AvaI CYCGRG 1 cut(s) 97
BbsI GAAGAC 1 cut(s) 791
BbvI GCAGC 4 cut(s) 574, 602, 832, 892
BccI CCATC 1 cut(s) 350
BceAI ACGGC 1 cut(s) 694
BciVI GTATCC 1 cut(s) 416
BcoDI GTCTC 4 cut(s) 100, 156, 363, 821
BcuI ACTAGT 1 cut(s) 335
BfaI CTAG 3 cut(s) 201, 336, 380
BfmI CTRYAG 1 cut(s) 588
BfuAI ACCTGC 1 cut(s) 686
BfuI GTATCC 1 cut(s) 416
BglI GCCNNNNNGGC 1 cut(s) 259
BisI GCNGC 4 cut(s) 588, 591, 846, 906
BlsI GCNGC 4 cut(s) 589, 592, 847, 907
BmeT110I CYCGRG 1 cut(s) 97
BmgT120I GGNCC 1 cut(s) 956
BmrI ACTGGG 1 cut(s) 665
BmsI GCATC 2 cut(s) 71, 856
BmuI ACTGGG 1 cut(s) 665
BpiI GAAGAC 1 cut(s) 791
BpmI CTGGAG 1 cut(s) 870
BsaAI YACGTR 1 cut(s) 644
BsaI GGTCTC 1 cut(s) 156
BsaJI CCNNGG 1 cut(s) 219
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 2 cut(s) 884, 1005
Bse118I RCCGGY 1 cut(s) 258
Bse1I ACTGG 2 cut(s) 312, 671
Bse3DI GCAATG 2 cut(s) 398, 472
BseDI CCNNGG 1 cut(s) 219
BseGI GGATG 1 cut(s) 215
BseLI CCNNNNNNNGG 2 cut(s) 884, 1005
BseMI GCAATG 2 cut(s) 398, 472
BseNI ACTGG 2 cut(s) 312, 671
BseXI GCAGC 4 cut(s) 574, 602, 832, 892
BshFI GGCC 1 cut(s) 957
BsiHKCI CYCGRG 1 cut(s) 97
BsiSI CCGG 1 cut(s) 259
BslFI GGGAC 4 cut(s) 287, 361, 653, 697
BslI CCNNNNNNNGG 2 cut(s) 884, 1005
BsmAI GTCTC 4 cut(s) 100, 156, 363, 821
BsmBI CGTCTC 1 cut(s) 363
BsmFI GGGAC 4 cut(s) 287, 361, 653, 697
BsmI GAATGC 2 cut(s) 334, 473
BsnI GGCC 1 cut(s) 957
Bso31I GGTCTC 1 cut(s) 156
BsoBI CYCGRG 1 cut(s) 97
Bsp143I GATC 3 cut(s) 61, 449, 879
BspANI GGCC 1 cut(s) 957
BspMAI CTGCAG 1 cut(s) 592
BspMI ACCTGC 1 cut(s) 686
BspPI GGATC 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 156
BsrDI GCAATG 2 cut(s) 398, 472
BsrFI RCCGGY 1 cut(s) 258
BsrI ACTGG 2 cut(s) 312, 671
BssAI RCCGGY 1 cut(s) 258
BssECI CCNNGG 1 cut(s) 219
BssMI GATC 3 cut(s) 61, 449, 879
Bst4CI ACNGT 4 cut(s) 73, 503, 560, 739
BstBAI YACGTR 1 cut(s) 644
BstF5I GGATG 1 cut(s) 215
BstKTI GATC 3 cut(s) 64, 452, 882
BstMAI GTCTC 4 cut(s) 100, 156, 363, 821
BstMBI GATC 3 cut(s) 61, 449, 879
BstMWI GCNNNNNNNGC 4 cut(s) 109, 259, 338, 902
BstSFI CTRYAG 1 cut(s) 588
BstV1I GCAGC 4 cut(s) 574, 602, 832, 892
BstV2I GAAGAC 1 cut(s) 791
BsuI GTATCC 1 cut(s) 416
BsuRI GGCC 1 cut(s) 957
BtsCI GGATG 1 cut(s) 215
BtsI GCAGTG 3 cut(s) 140, 326, 477
BtsIMutI CAGTG 4 cut(s) 140, 326, 477, 678
BveI ACCTGC 1 cut(s) 686
Cfr10I RCCGGY 1 cut(s) 258
Cfr13I GGNCC 1 cut(s) 956
CviAII CATG 3 cut(s) 120, 521, 635
DpnI GATC 3 cut(s) 63, 451, 881
DpnII GATC 3 cut(s) 61, 449, 879
DraI TTTAAA 1 cut(s) 462
Eco31I GGTCTC 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 945
Eco88I CYCGRG 1 cut(s) 97
Esp3I CGTCTC 1 cut(s) 363
FaeI CATG 3 cut(s) 123, 524, 638
FaqI GGGAC 4 cut(s) 287, 361, 653, 697
FatI CATG 3 cut(s) 119, 520, 634
FblI GTMKAC 1 cut(s) 963
Fnu4HI GCNGC 4 cut(s) 588, 591, 846, 906
FokI GGATG 1 cut(s) 202
Fsp4HI GCNGC 4 cut(s) 588, 591, 846, 906
FspBI CTAG 3 cut(s) 201, 336, 380
GluI GCNGC 4 cut(s) 588, 591, 846, 906
GsuI CTGGAG 1 cut(s) 870
HaeIII GGCC 1 cut(s) 957
HapII CCGG 1 cut(s) 259
Hin1II CATG 3 cut(s) 123, 524, 638
HinfI GANTC 1 cut(s) 106
HpaII CCGG 1 cut(s) 259
HphI GGTGA 4 cut(s) 37, 365, 836, 866
Hpy166II GTNNAC 3 cut(s) 138, 512, 964
Hpy188I TCNGA 4 cut(s) 223, 584, 598, 941
Hpy188III TCNNGA 4 cut(s) 78, 303, 380, 989
Hpy8I GTNNAC 3 cut(s) 138, 512, 964
HpyAV CCTTC 1 cut(s) 235
HpyCH4III ACNGT 4 cut(s) 73, 503, 560, 739
HpyCH4IV ACGT 2 cut(s) 426, 643
HpyCH4V TGCA 9 cut(s) 207, 231, 280, 319, 477, 590, 695, 725, 869
HpyF10VI GCNNNNNNNGC 4 cut(s) 109, 259, 338, 902
HpySE526I ACGT 2 cut(s) 426, 643
Hsp92II CATG 3 cut(s) 123, 524, 638
Kzo9I GATC 3 cut(s) 61, 449, 879
LmnI GCTCC 1 cut(s) 647
Lsp1109I GCAGC 4 cut(s) 574, 602, 832, 892
LweI GCATC 2 cut(s) 71, 856
MaeI CTAG 3 cut(s) 201, 336, 380
MaeII ACGT 2 cut(s) 426, 643
MaeIII GTNAC 4 cut(s) 19, 554, 730, 739
MalI GATC 3 cut(s) 63, 451, 881
MboI GATC 3 cut(s) 61, 449, 879
MboII GAAGA 3 cut(s) 318, 793, 796
MfeI CAATTG 1 cut(s) 726
MluCI AATT 6 cut(s) 7, 651, 702, 726, 839, 972
MmeI TCCRAC 2 cut(s) 105, 621
MnlI CCTC 4 cut(s) 229, 845, 937, 941
MseI TTAA 6 cut(s) 461, 603, 654, 660, 705, 890
MslI CAYNNNNRTG 1 cut(s) 525
MspI CCGG 1 cut(s) 259
MunI CAATTG 1 cut(s) 726
Mva1269I GAATGC 2 cut(s) 334, 473
MwoI GCNNNNNNNGC 4 cut(s) 109, 259, 338, 902
NdeII GATC 3 cut(s) 61, 449, 879
NlaIII CATG 3 cut(s) 123, 524, 638
NmuCI GTSAC 3 cut(s) 554, 730, 739
PctI GAATGC 2 cut(s) 334, 473
PfeI GAWTC 1 cut(s) 106
PkrI GCNGC 4 cut(s) 589, 592, 847, 907
Ppu21I YACGTR 1 cut(s) 644
PshBI ATTAAT 1 cut(s) 654
PsiI TTATAA 1 cut(s) 1012
PspPI GGNCC 1 cut(s) 956
PstI CTGCAG 1 cut(s) 592
RseI CAYNNNNRTG 1 cut(s) 525
SaqAI TTAA 6 cut(s) 461, 603, 654, 660, 705, 890
SatI GCNGC 4 cut(s) 588, 591, 846, 906
Sau3AI GATC 3 cut(s) 61, 449, 879
Sau96I GGNCC 1 cut(s) 956
SfaNI GCATC 2 cut(s) 71, 856
SfcI CTRYAG 1 cut(s) 588
SmiMI CAYNNNNRTG 1 cut(s) 525
SpeI ACTAGT 1 cut(s) 335
Sse9I AATT 6 cut(s) 7, 651, 702, 726, 839, 972
SspMI CTAG 3 cut(s) 201, 336, 380
TaaI ACNGT 4 cut(s) 73, 503, 560, 739
TaiI ACGT 2 cut(s) 429, 646
TaqI TCGA 2 cut(s) 79, 438
TasI AATT 6 cut(s) 7, 651, 702, 726, 839, 972
TfiI GAWTC 1 cut(s) 106
Tru1I TTAA 6 cut(s) 461, 603, 654, 660, 705, 890
Tru9I TTAA 6 cut(s) 461, 603, 654, 660, 705, 890
TscAI CASTG 4 cut(s) 140, 326, 484, 678
TseFI GTSAC 3 cut(s) 554, 730, 739
TseI GCWGC 4 cut(s) 587, 590, 845, 905
Tsp45I GTSAC 3 cut(s) 554, 730, 739
TspDTI ATGAA 3 cut(s) 387, 480, 623
TspGWI ACGGA 1 cut(s) 435
TspRI CASTG 4 cut(s) 140, 326, 484, 678
VspI ATTAAT 1 cut(s) 654
XapI RAATTY 2 cut(s) 839, 972
XbaI TCTAGA 1 cut(s) 379
XmiI GTMKAC 1 cut(s) 963
XspI CTAG 3 cut(s) 201, 336, 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.