Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000564

Physical Location & Seq

Genomic Coordinates Reverse (-)

22435351 .. 22439094

Gene Structure 3744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G225100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGGATACCAAAAGTAACCCAAAATTCGGGTTCAACATTCTTTTATTATGCCTATTTCTCAAGTCCCATATATCCCTTGCAGCTGACACCATAAGTGCAGACGAATCTCTCTCGGGTGATCAAACCATTGTCTCAGCGGATGGGGTTTTTGAGCTGGGTTTCTTCAAACCAGGTATTTTTTCATACAACTACGTAGGCATATGGTACTCTGAGCAAGTAGTATCTGAGAGGACCATAGTTTGGGTGGCAAATAGGGAAATACCAGTCGCTGATAGATTTTCTTCAGTCTTGAGGATCTCAGATGGTAATCTAATTCTCTTCAGTGAATCCAAAACTCCAGTTTGGTCCACAAATTTAGCCTCCACCACCACCTCAGGTTCTGTACAAGCAGTTCTATTAGATAGTGGAAACCTTGTCTTAAGGGCTGATGGGTCAAGTACTAATACATCAGAGCCTTTGTGGCAAAGCTTTGATCATCCAGCTCATACATTGCTACCAGGAGGTAAACTTGGATTCAACATTGTCACTAATCGAACCCAAATTCTCACATCATGGAAGAGTTCAGAGGATCCTGCACCAGGTCTTTTCAGTCTTCAGCTTGACCCCAATGGAAGTAATGCATATCTCATATTTTGGAATAGGTCTAGACAGTATTGGAGCAGTGGAGCATGGGATGCAAAGTCACGTATTTTCAGCTGGGTTCCTGAGATGAGGCGTAACAATATGTACAATTACAGCTATGTTACAAACAAAAACGAAAGTTATTACACCTATTCTCTAAATAATCCCAAGACAATATCTCGACTCGTGATGCATACCTCAGGGCAGATTCGGCAATTCACATGGTCGGAGAATTCCAGAGAGTGGAATTTGTTTGGGAGCCAACCAAAAAGGCAATGTGAAGTTTATGATTTTTGCGGGGCATCCGGCAGTTGCAACGAGTTAAGCACGGTCTCCTGTAATTGTTTGACAGGTTTTGAGCCGAAGTCAGAGATTGAGTGGAATTTGCGGGCTTATTCTAGTGGGTGTTCAAGAATAACCAACCTGCAGTACTGTGGGACTGCTGTTAGTACTAGTGCTAAATATAGGGCGCCAGACGTGTTTCAAGAAATCCGTATCATGTCATTGCCAGAAAATAATCAGTCTGTGGTGATTGGAAATATTTCTGAATGTGGTTCAATCTGCTTAAACAGCTGCTCTTGCACTGCTTATGCTTATGATAGCAGCACTGGATGCTCAATTTTCACTGGAGATCTCTTAAATTTGCAGCAACTGGGAACAGGTGAAAGGAGTGGAACAACTTTATACATCAGACTTGGATCTGCTCTTCCACTGCTTAAAAGTGTTAATGCTAATAAACGATCCCTTGTGATTGCATTAGTCTCAGAAACAGCAGGATTGCTTACAATAACTTTTGGGTATTTCTTATGGAAGAAAACATGGGGAAAGGAAAGGGCGCGTAGGAGGAAGAATGGTGAGACTAAAACATTGGAAAAGGAAAGGAAGCATAGGAAGAAATATGATGAAATTTTAAGTAATGTTGGTGATGGAGATGGAAAGAATGATACAGAGCTACCACTCTTCAGTTTAAGGAGTATATTAGCTGCTACTAACAACTTCTCTGAAGCTAATAAGGTGGGAGAAGGAGGGTTTGGCCCTGTTTATAAGGGGATTTTGCCTGGAAATCAAGAAGTGGCCATAAAAAGGCTGTCGAAGAAGTCAGGGCAAGGACATCAGGAGTTCATGAATGAGTTAAAGCTTATAGCCAAACTCCAACACACCAATCTTGTTAGGCTCTTTGGTTACTGTATTGAAGAGGAGGAACTGATTTTGATCTACGAGTTCATGGCCAATCGAAGTCTGGACAAGTTTTTGTTTGATCCATCTGAAAAATTAGAGCTAGATTGGGGAAAACGTTTTCGAATTATAGAAGGTATTGCTCAAGGAATACTTTATATCCACAAGTATTCCAGATTGAAAATCATTCACAGGGACCTGAAAGCAAGTAATGTTCTGTTGGATGGAGCAATGAACCCCAAAATTTCAGACTTTGGAATGGCAAAGATTTTTGAGATAAATCAAACTGAAGCAAATACTAACAGAGTTGTTGGCACATACGGCTACATGTCACCTGAGTATGCAAGATATGGCCATTTCTCTGAGAAACTGGATGTGTTTAGTTTTGGAGTGTTGCTGCTGGAGATTGTTAGTGGAAAGAAGAATGCTGCTTTTCATCGCTTTGAACATTCACTAACTCTTGCTGGATGGGCATGGGAATTATGGAGAGAAGGTAGAGGAATGGAGGTTATCGATGCATCAGTGAGGGAAACATGCCGGCATGATGAAGCTTTGAAGTGTATACAGGTAGGATTTTTGTGTGTTCAAGAAGATCCAGCTGATCGGCCAACAATGTCTTCTGTAATTCTTATGCTGGCCAATGAAGCTACATCTCTTCCACCCTCCAAAGAACCTGCTTTTTCAACACATAGGAATTCCGTTGCTGTTAGTTCTTCTCCTCAAACAACTCCCATTATTTCCAATAATGCAGTAACCATTAGTTTGCCAGAAGGTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

859

Amino Acids

95.89

Weight (kDa)

7.99

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000564)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g44064 FvH4_6g44064 FvH4_6g44100 FvH4_6g44101 FvH4_6g51830
malus_domestica	MD09G1094400.v1.1 MD09G1094800.v1.1 MD09G1095200.v1.1 MD09G1095900.v1.1 MD09G1096000.v1.1 MD09G1096200.v1.1 MD17G1083900.v1.1 MD17G1088500.v1.1
prunus_persica	Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G224900_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225100_v2.0.a1 Prupe.3G225200_v2.0.a1 Prupe.3G225200_v2.0.a1
pyrus_communis	pycom09g01920 pycom09g01930 pycom09g01940 pycom09g01950 pycom09g02000 pycom09g02050 pycom09g02070 pycom17g08540
rosa_chinensis	RchiOBHm_Chr1g0318601 RchiOBHm_Chr1g0318761 RchiOBHm_Chr1g0342541 RchiOBHm_Chr2g0160651 RchiOBHm_Chr2g0160831 RchiOBHm_Chr4g0405661 RchiOBHm_Chr4g0405691 RchiOBHm_Chr4g0405701 RchiOBHm_Chr7g0238591
rosa_laevigata	RLG00000002292 RLG00000008826 RLG00000008828 RLG00000008829 RLG00000021243 RLG00000021245 RLG00000030522
rosa_multiflora	Rmu_co8432573.1_g000001 Rmu_sc0001200.1_g000041 Rmu_sc0001200.1_g000043 Rmu_sc0002545.1_g000017 Rmu_sc0002773.1_g000017 Rmu_sc0012550.1_g000008
rosa_roxburghii	Rroxscaffold_2G00089500 Rroxscaffold_5G00350130 Rroxscaffold_5G00350180
rosa_rugosa	Rorug01G0022300 Rorug04G0061600
rosa_samantha	Rh1AG035300 Rh1CG034300 Rh1DG036100 Rh1DG149100 Rh2AG550900 Rh2BG564200 Rh2BG565500 Rh2CG535300 Rh2DG574400 Rh4AG133100 Rh4AG133200 Rh4AG133300 Rh4BG128200 Rh4CG141000 Rh4DG127700 Rh4DG127900
rosa_wichuraiana	Rw2G045540 Rw2G045650 Rw4G010790 Rw4G010800 Rw4G010810 Rw4G010830 Rw7G027620 Rw7G027630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1665
Acc36I	ACCTGC	2 cut(s)	1053, 2479
AccB1I	GGYRCC	1 cut(s)	1090
AccB7I	CCANNNNNTGG	2 cut(s)	240, 864
AccI	GTMKAC	1 cut(s)	2359
AccII	CGCG	1 cut(s)	1459
AciI	CCGC	3 cut(s)	137, 918, 1009
AclI	AACGTT	1 cut(s)	1915
AclWI	GGATC	7 cut(s)	302, 563, 576, 1327, 1356, 1874, 2384
AcoI	YGGCCR	5 cut(s)	1695, 1848, 2149, 2402, 2433
AcuI	CTGAAG	6 cut(s)	267, 304, 578, 1567, 1644, 2106
AcyI	GRCGYC	1 cut(s)	1091
AfaI	GTAC	6 cut(s)	206, 384, 439, 728, 1052, 1072
AfiI	CCNNNNNNNGG	5 cut(s)	26, 240, 578, 864, 1704
AflII	CTTAAG	1 cut(s)	418
AflIII	ACRYGT	2 cut(s)	1098, 2124
AhlI	ACTAGT	1 cut(s)	1073
AjiI	CACGTC	1 cut(s)	1099
AjnI	CCWGG	4 cut(s)	169, 496, 577, 1678
AjuI	GAANNNNNNNTTGG	4 cut(s)	1635, 1667, 2398, 2430
Alw26I	GTCTC	4 cut(s)	136, 958, 1387, 1472
AlwI	GGATC	7 cut(s)	302, 563, 576, 1327, 1356, 1874, 2384
AlwNI	CAGNNNCTG	3 cut(s)	269, 380, 1273
Ama87I	CYCGRG	1 cut(s)	112
AoxI	GGCC	6 cut(s)	1654, 1695, 1848, 2149, 2402, 2433
ApeKI	GCWGC	7 cut(s)	80, 1194, 1224, 1267, 1604, 2194, 2225
Asp700I	GAANNNNTTC	1 cut(s)	1162
AspLEI	GCGC	2 cut(s)	1093, 1459
AspS9I	GGNCC	4 cut(s)	231, 345, 1655, 1993
AsuHPI	GGTGA	6 cut(s)	128, 1162, 1295, 1487, 1556, 2121
AsuII	TTCGAA	1 cut(s)	1921
AvaI	CYCGRG	1 cut(s)	112
AvaII	GGWCC	3 cut(s)	231, 345, 1993
AxyI	CCTNAGG	2 cut(s)	373, 820
BalI	TGGCCA	4 cut(s)	1697, 1850, 2151, 2435
BamHI	GGATCC	1 cut(s)	568
BanI	GGYRCC	1 cut(s)	1090
BauI	CACGAG	1 cut(s)	806
BbsI	GAAGAC	2 cut(s)	584, 2406
BbvI	GCAGC	7 cut(s)	92, 1181, 1236, 1279, 1591, 2181, 2212
BccI	CCATC	8 cut(s)	134, 296, 422, 1541, 1547, 1891, 2015, 2259
BceAI	ACGGC	1 cut(s)	2134
BciT130I	CCWGG	4 cut(s)	171, 498, 579, 1680
BclI	TGATCA	2 cut(s)	118, 472
BcoDI	GTCTC	4 cut(s)	136, 958, 1387, 1472
BcuI	ACTAGT	1 cut(s)	1073
BfaI	CTAG	4 cut(s)	645, 1020, 1074, 1901
BfmI	CTRYAG	1 cut(s)	1046
BfoI	RGCGCY	1 cut(s)	1094
BfrI	CTTAAG	1 cut(s)	418
BfuAI	ACCTGC	2 cut(s)	1053, 2479
BglI	GCCNNNNNGGC	1 cut(s)	460
BglII	AGATCT	1 cut(s)	1252
BisI	GCNGC	7 cut(s)	81, 1195, 1225, 1268, 1605, 2195, 2226
BlsI	GCNGC	7 cut(s)	82, 1196, 1226, 1269, 1606, 2196, 2227
BmcAI	AGTACT	3 cut(s)	439, 1052, 1072
Bme1390I	CCNGG	4 cut(s)	171, 498, 579, 1680
Bme18I	GGWCC	3 cut(s)	231, 345, 1993
BmeT110I	CYCGRG	1 cut(s)	112
BmgBI	CACGTC	1 cut(s)	1099
BmgT120I	GGNCC	4 cut(s)	231, 345, 1655, 1993
BmiI	GGNNCC	5 cut(s)	570, 702, 881, 1092, 1994
BmrFI	CCNGG	4 cut(s)	171, 498, 579, 1680
BmrI	ACTGGG	1 cut(s)	1283
BmsI	GCATC	6 cut(s)	664, 801, 932, 1223, 2302, 2324
BmuI	ACTGGG	1 cut(s)	1283
BpiI	GAAGAC	2 cut(s)	584, 2406
BpmI	CTGGAG	3 cut(s)	321, 1269, 2219
Bpu14I	TTCGAA	1 cut(s)	1921
BpuEI	CTTGAG	3 cut(s)	44, 310, 1926
Bsa29I	ATCGAT	1 cut(s)	2310
BsaAI	YACGTR	2 cut(s)	193, 686
BsaBI	GATNNNNATC	2 cut(s)	306, 1832
BsaHI	GRCGYC	1 cut(s)	1091
BsaI	GGTCTC	1 cut(s)	958
BsaXI	ACNNNNNCTCC	2 cut(s)	2275, 2305
Bsc4I	CCNNNNNNNGG	5 cut(s)	26, 240, 578, 864, 1704
Bse118I	RCCGGY	1 cut(s)	2334
Bse1I	ACTGG	6 cut(s)	263, 338, 1234, 1252, 1278, 2172
Bse21I	CCTNAGG	2 cut(s)	373, 820
Bse3DI	GCAATG	4 cut(s)	488, 902, 1124, 2034
Bse8I	GATNNNNATC	2 cut(s)	306, 1832
BseBI	CCWGG	4 cut(s)	171, 498, 579, 1680
BseCI	ATCGAT	1 cut(s)	2310
BseGI	GGATG	8 cut(s)	145, 475, 679, 923, 1238, 2026, 2176, 2270
BseJI	GATNNNNATC	2 cut(s)	306, 1832
BseLI	CCNNNNNNNGG	5 cut(s)	26, 240, 578, 864, 1704
BseMI	GCAATG	4 cut(s)	488, 902, 1124, 2034
BseNI	ACTGG	6 cut(s)	263, 338, 1234, 1252, 1278, 2172
BseRI	GAGGAG	2 cut(s)	1832, 2505
BseXI	GCAGC	7 cut(s)	92, 1181, 1236, 1279, 1591, 2181, 2212
BseYI	CCCAGC	2 cut(s)	154, 696
BsgI	GTGCAG	2 cut(s)	117, 558
Bsh1236I	CGCG	1 cut(s)	1459
BshFI	GGCC	6 cut(s)	1656, 1697, 1850, 2151, 2404, 2435
BshNI	GGYRCC	1 cut(s)	1090
BshVI	ATCGAT	1 cut(s)	2310
BsiHKCI	CYCGRG	1 cut(s)	112
BsiSI	CCGG	2 cut(s)	927, 2335
BslFI	GGGAC	3 cut(s)	49, 1072, 2006
BslI	CCNNNNNNNGG	5 cut(s)	26, 240, 578, 864, 1704
BsmAI	GTCTC	4 cut(s)	136, 958, 1387, 1472
BsmFI	GGGAC	3 cut(s)	49, 1072, 2006
BsmI	GAATGC	1 cut(s)	2227
BsnI	GGCC	6 cut(s)	1656, 1697, 1850, 2151, 2404, 2435
Bso31I	GGTCTC	1 cut(s)	958
BsoBI	CYCGRG	1 cut(s)	112
Bsp119I	TTCGAA	1 cut(s)	1921
Bsp1407I	TGTACA	2 cut(s)	382, 726
BspACI	CCGC	3 cut(s)	137, 918, 1009
BspANI	GGCC	6 cut(s)	1656, 1697, 1850, 2151, 2404, 2435
BspDI	ATCGAT	1 cut(s)	2310
BspFNI	CGCG	1 cut(s)	1459
BspHI	TCATGA	1 cut(s)	1743
BspLI	GGNNCC	5 cut(s)	570, 702, 881, 1092, 1994
BspMAI	CTGCAG	1 cut(s)	1050
BspMI	ACCTGC	2 cut(s)	1053, 2479
BspPI	GGATC	7 cut(s)	302, 563, 576, 1327, 1356, 1874, 2384
BspQI	GCTCTTC	1 cut(s)	1332
BspT104I	TTCGAA	1 cut(s)	1921
BspT107I	GGYRCC	1 cut(s)	1090
BspTI	CTTAAG	1 cut(s)	418
BspTNI	GGTCTC	1 cut(s)	958
BsrDI	GCAATG	4 cut(s)	488, 902, 1124, 2034
BsrFI	RCCGGY	1 cut(s)	2334
BsrGI	TGTACA	2 cut(s)	382, 726
BsrI	ACTGG	6 cut(s)	263, 338, 1234, 1252, 1278, 2172
BssAI	RCCGGY	1 cut(s)	2334
BssNAI	GTATAC	1 cut(s)	2360
BssNI	GRCGYC	1 cut(s)	1091
BssSI	CACGAG	1 cut(s)	806
Bst1107I	GTATAC	1 cut(s)	2360
Bst2BI	CACGAG	1 cut(s)	806
Bst2UI	CCWGG	4 cut(s)	171, 498, 579, 1680
Bst4CI	ACNGT	4 cut(s)	651, 952, 1055, 1808
Bst6I	CTCTTC	6 cut(s)	323, 551, 1332, 1586, 1809, 2457
BstACI	GRCGYC	1 cut(s)	1091
BstAFI	CTTAAG	1 cut(s)	418
BstAPI	GCANNNNNTGC	2 cut(s)	674, 1233
BstAUI	TGTACA	2 cut(s)	382, 726
BstBAI	YACGTR	2 cut(s)	193, 686
BstBI	TTCGAA	1 cut(s)	1921
BstC8I	GCNNGC	3 cut(s)	1011, 2336, 2433
BstENI	CCTNNNNNAGG	1 cut(s)	576
BstF5I	GGATG	8 cut(s)	145, 475, 679, 923, 1238, 2026, 2176, 2270
BstFNI	CGCG	1 cut(s)	1459
BstH2I	RGCGCY	1 cut(s)	1094
BstHHI	GCGC	2 cut(s)	1093, 1459
BstMAI	GTCTC	4 cut(s)	136, 958, 1387, 1472
BstMWI	GCNNNNNNNGC	9 cut(s)	460, 674, 832, 1191, 1200, 1233, 2118, 2267, 2441
BstNI	CCWGG	4 cut(s)	171, 498, 579, 1680
BstNSI	RCATGY	2 cut(s)	2128, 2334
BstSCI	CCNGG	4 cut(s)	169, 496, 577, 1678
BstSFI	CTRYAG	1 cut(s)	1046
BstSNI	TACGTA	1 cut(s)	193
BstUI	CGCG	1 cut(s)	1459
BstV1I	GCAGC	7 cut(s)	92, 1181, 1236, 1279, 1591, 2181, 2212
BstV2I	GAAGAC	2 cut(s)	584, 2406
BstX2I	RGATCY	5 cut(s)	294, 568, 1252, 1319, 2389
BstYI	RGATCY	5 cut(s)	294, 568, 1252, 1319, 2389
BstZ17I	GTATAC	1 cut(s)	2360
Bsu15I	ATCGAT	1 cut(s)	2310
Bsu36I	CCTNAGG	2 cut(s)	373, 820
BsuRI	GGCC	6 cut(s)	1656, 1697, 1850, 2151, 2404, 2435
BsuTUI	ATCGAT	1 cut(s)	2310
BtgZI	GCGATG	1 cut(s)	2219
BtrI	CACGTC	1 cut(s)	1099
BtsCI	GGATG	8 cut(s)	145, 475, 679, 923, 1238, 2026, 2176, 2270
BtsI	GCAGTG	3 cut(s)	667, 1203, 1331
BtsIMutI	CAGTG	7 cut(s)	328, 667, 1203, 1227, 1245, 1331, 2325
BveI	ACCTGC	2 cut(s)	1053, 2479
Cac8I	GCNNGC	3 cut(s)	1011, 2336, 2433
CaiI	CAGNNNCTG	3 cut(s)	269, 380, 1273
CciI	TCATGA	1 cut(s)	1743
CfoI	GCGC	2 cut(s)	1093, 1459
Cfr10I	RCCGGY	1 cut(s)	2334
Cfr13I	GGNCC	4 cut(s)	231, 345, 1655, 1993
ClaI	ATCGAT	1 cut(s)	2310
CsiI	ACCWGGT	2 cut(s)	169, 577
Csp6I	GTAC	6 cut(s)	205, 383, 438, 727, 1051, 1071
CviQI	GTAC	6 cut(s)	205, 383, 438, 727, 1051, 1071
DinI	GGCGCC	1 cut(s)	1092
EaeI	YGGCCR	5 cut(s)	1695, 1848, 2149, 2402, 2433
Eam1104I	CTCTTC	6 cut(s)	323, 551, 1332, 1586, 1809, 2457
EarI	CTCTTC	6 cut(s)	323, 551, 1332, 1586, 1809, 2457
Eco105I	TACGTA	1 cut(s)	193
Eco31I	GGTCTC	1 cut(s)	958
Eco47I	GGWCC	3 cut(s)	231, 345, 1993
Eco57I	CTGAAG	6 cut(s)	267, 304, 578, 1567, 1644, 2106
Eco81I	CCTNAGG	2 cut(s)	373, 820
Eco88I	CYCGRG	1 cut(s)	112
EcoNI	CCTNNNNNAGG	1 cut(s)	576
EcoO109I	RGGNCCY	1 cut(s)	1993
EcoRI	GAATTC	2 cut(s)	853, 2491
EcoRII	CCWGG	4 cut(s)	169, 496, 577, 1678
EcoT22I	ATGCAT	3 cut(s)	622, 816, 2317
EgeI	GGCGCC	1 cut(s)	1092
EheI	GGCGCC	1 cut(s)	1092
FalI	AAGNNNNNCTT	2 cut(s)	1935, 1967
FaqI	GGGAC	3 cut(s)	49, 1072, 2006
FauI	CCCGC	2 cut(s)	911, 1002
FauNDI	CATATG	1 cut(s)	200
FbaI	TGATCA	2 cut(s)	118, 472
FblI	GTMKAC	1 cut(s)	2359
Fnu4HI	GCNGC	7 cut(s)	81, 1195, 1225, 1268, 1605, 2195, 2226
FokI	GGATG	8 cut(s)	152, 462, 686, 910, 1245, 2033, 2183, 2277
Fsp4HI	GCNGC	7 cut(s)	81, 1195, 1225, 1268, 1605, 2195, 2226
FspBI	CTAG	4 cut(s)	645, 1020, 1074, 1901
GlaI	GCGC	2 cut(s)	1092, 1458
GluI	GCNGC	7 cut(s)	81, 1195, 1225, 1268, 1605, 2195, 2226
GsaI	CCCAGC	2 cut(s)	158, 700
GsuI	CTGGAG	3 cut(s)	321, 1269, 2219
HaeII	RGCGCY	1 cut(s)	1094
HaeIII	GGCC	6 cut(s)	1656, 1697, 1850, 2151, 2404, 2435
HapII	CCGG	2 cut(s)	927, 2335
HhaI	GCGC	2 cut(s)	1093, 1459
Hin1I	GRCGYC	1 cut(s)	1091
Hin6I	GCGC	2 cut(s)	1091, 1457
HinP1I	GCGC	2 cut(s)	1091, 1457
HindIII	AAGCTT	3 cut(s)	466, 1757, 2346
HinfI	GANTC	5 cut(s)	104, 326, 513, 804, 829
HpaII	CCGG	2 cut(s)	927, 2335
HphI	GGTGA	6 cut(s)	128, 1162, 1295, 1487, 1556, 2121
Hpy166II	GTNNAC	3 cut(s)	348, 506, 2360
Hpy8I	GTNNAC	3 cut(s)	348, 506, 2360
HpyAV	CCTTC	4 cut(s)	1637, 1925, 2282, 2561
HpyCH4III	ACNGT	4 cut(s)	651, 952, 1055, 1808
HpyCH4IV	ACGT	4 cut(s)	192, 685, 1098, 1915
HpyF10VI	GCNNNNNNNGC	9 cut(s)	460, 674, 832, 1191, 1200, 1233, 2118, 2267, 2441
HpySE526I	ACGT	4 cut(s)	192, 685, 1098, 1915
Hsp92I	GRCGYC	1 cut(s)	1091
HspAI	GCGC	2 cut(s)	1091, 1457
KasI	GGCGCC	1 cut(s)	1090
KroI	GCCGGC	1 cut(s)	2334
KroNI	GCCGGC	1 cut(s)	2336
Ksp22I	TGATCA	2 cut(s)	118, 472
LguI	GCTCTTC	1 cut(s)	1332
LmnI	GCTCC	4 cut(s)	657, 665, 879, 2024
Lsp1109I	GCAGC	7 cut(s)	92, 1181, 1236, 1279, 1591, 2181, 2212
LweI	GCATC	6 cut(s)	664, 801, 932, 1223, 2302, 2324
MabI	ACCWGGT	2 cut(s)	169, 577
MaeI	CTAG	4 cut(s)	645, 1020, 1074, 1901
MaeII	ACGT	4 cut(s)	192, 685, 1098, 1915
MaeIII	GTNAC	8 cut(s)	14, 523, 681, 716, 742, 1802, 2127, 2548
MflI	RGATCY	5 cut(s)	294, 568, 1252, 1319, 2389
MlsI	TGGCCA	4 cut(s)	1697, 1850, 2151, 2435
MluNI	TGGCCA	4 cut(s)	1697, 1850, 2151, 2435
Mly113I	GGCGCC	1 cut(s)	1091
MlyI	GAGTC	1 cut(s)	798
MmeI	TCCRAC	3 cut(s)	828, 1798, 1998
Mox20I	TGGCCA	4 cut(s)	1697, 1850, 2151, 2435
Mph1103I	ATGCAT	3 cut(s)	622, 816, 2317
MroNI	GCCGGC	1 cut(s)	2334
MroXI	GAANNNNTTC	1 cut(s)	1162
MscI	TGGCCA	4 cut(s)	1697, 1850, 2151, 2435
MseI	TTAA	9 cut(s)	419, 944, 1187, 1259, 1338, 1347, 1532, 1589, 1754
Msp20I	TGGCCA	4 cut(s)	1697, 1850, 2151, 2435
MspA1I	CMGCKG	5 cut(s)	83, 137, 696, 1194, 2396
MspCI	CTTAAG	1 cut(s)	418
MspI	CCGG	2 cut(s)	927, 2335
MspR9I	CCNGG	4 cut(s)	171, 498, 579, 1680
Mva1269I	GAATGC	1 cut(s)	2227
MvaI	CCWGG	4 cut(s)	171, 498, 579, 1680
MvnI	CGCG	1 cut(s)	1459
MwoI	GCNNNNNNNGC	9 cut(s)	460, 674, 832, 1191, 1200, 1233, 2118, 2267, 2441
NaeI	GCCGGC	1 cut(s)	2336
NarI	GGCGCC	1 cut(s)	1091
NdeI	CATATG	1 cut(s)	200
NgoMIV	GCCGGC	1 cut(s)	2334
NlaIV	GGNNCC	5 cut(s)	570, 702, 881, 1092, 1994
NmuCI	GTSAC	3 cut(s)	523, 681, 2127
NsiI	ATGCAT	3 cut(s)	622, 816, 2317
NspI	RCATGY	2 cut(s)	2128, 2334
NspV	TTCGAA	1 cut(s)	1921
PagI	TCATGA	1 cut(s)	1743
PciI	ACATGT	1 cut(s)	2124
PciSI	GCTCTTC	1 cut(s)	1332
PctI	GAATGC	1 cut(s)	2227
PdiI	GCCGGC	1 cut(s)	2336
PdmI	GAANNNNTTC	1 cut(s)	1162
PfeI	GAWTC	4 cut(s)	104, 326, 513, 829
PflMI	CCANNNNNTGG	2 cut(s)	240, 864
PkrI	GCNGC	7 cut(s)	82, 1196, 1226, 1269, 1606, 2196, 2227
PleI	GAGTC	1 cut(s)	798
PluTI	GGCGCC	1 cut(s)	1094
PpsI	GAGTC	1 cut(s)	798
Ppu21I	YACGTR	2 cut(s)	193, 686
PpuMI	RGGWCCY	1 cut(s)	1993
PscI	ACATGT	1 cut(s)	2124
PsiI	TTATAA	1 cut(s)	1665
Psp1406I	AACGTT	1 cut(s)	1915
Psp5II	RGGWCCY	1 cut(s)	1993
Psp6I	CCWGG	4 cut(s)	169, 496, 577, 1678
PspFI	CCCAGC	2 cut(s)	154, 696
PspGI	CCWGG	4 cut(s)	169, 496, 577, 1678
PspN4I	GGNNCC	5 cut(s)	570, 702, 881, 1092, 1994
PspPI	GGNCC	4 cut(s)	231, 345, 1655, 1993
PspPPI	RGGWCCY	1 cut(s)	1993
PsrI	GAACNNNNNNTAC	2 cut(s)	375, 407
PstI	CTGCAG	1 cut(s)	1050
PstNI	CAGNNNCTG	3 cut(s)	269, 380, 1273
PsuI	RGATCY	5 cut(s)	294, 568, 1252, 1319, 2389
PvuII	CAGCTG	4 cut(s)	83, 696, 1194, 2396
RsaI	GTAC	6 cut(s)	206, 384, 439, 728, 1052, 1072
RsaNI	GTAC	6 cut(s)	205, 383, 438, 727, 1051, 1071
SapI	GCTCTTC	1 cut(s)	1332
SaqAI	TTAA	9 cut(s)	419, 944, 1187, 1259, 1338, 1347, 1532, 1589, 1754
SatI	GCNGC	7 cut(s)	81, 1195, 1225, 1268, 1605, 2195, 2226
Sau96I	GGNCC	4 cut(s)	231, 345, 1655, 1993
ScaI	AGTACT	3 cut(s)	439, 1052, 1072
SchI	GAGTC	1 cut(s)	798
ScrFI	CCNGG	4 cut(s)	171, 498, 579, 1680
SexAI	ACCWGGT	2 cut(s)	169, 577
SfaNI	GCATC	6 cut(s)	664, 801, 932, 1223, 2302, 2324
SfcI	CTRYAG	1 cut(s)	1046
SfoI	GGCGCC	1 cut(s)	1092
SfuI	TTCGAA	1 cut(s)	1921
SinI	GGWCC	3 cut(s)	231, 345, 1993
SmlI	CTYRAG	4 cut(s)	59, 289, 418, 1941
SmoI	CTYRAG	4 cut(s)	59, 289, 418, 1941
SnaBI	TACGTA	1 cut(s)	193
SpeI	ACTAGT	1 cut(s)	1073
SsiI	CCGC	3 cut(s)	137, 918, 1009
SspDI	GGCGCC	1 cut(s)	1090
SspI	AATATT	1 cut(s)	1162
SspMI	CTAG	4 cut(s)	645, 1020, 1074, 1901
StyD4I	CCNGG	4 cut(s)	169, 496, 577, 1678
TaaI	ACNGT	4 cut(s)	651, 952, 1055, 1808
TaiI	ACGT	4 cut(s)	195, 688, 1101, 1918
TaqI	TCGA	7 cut(s)	532, 802, 1712, 1855, 1921, 2310, 2572
TatI	WGTACW	5 cut(s)	382, 437, 726, 1050, 1070
TfiI	GAWTC	4 cut(s)	104, 326, 513, 829
Tru1I	TTAA	9 cut(s)	419, 944, 1187, 1259, 1338, 1347, 1532, 1589, 1754
Tru9I	TTAA	9 cut(s)	419, 944, 1187, 1259, 1338, 1347, 1532, 1589, 1754
TscAI	CASTG	7 cut(s)	328, 667, 1210, 1234, 1252, 1338, 2325
TseFI	GTSAC	3 cut(s)	523, 681, 2127
TseI	GCWGC	7 cut(s)	80, 1194, 1224, 1267, 1604, 2194, 2225
Tsp45I	GTSAC	3 cut(s)	523, 681, 2127
TspDTI	ATGAA	9 cut(s)	171, 1539, 1732, 1760, 1834, 2045, 2222, 2358, 2454
TspGWI	ACGGA	2 cut(s)	1103, 2485
TspRI	CASTG	7 cut(s)	328, 667, 1210, 1234, 1252, 1338, 2325
Van91I	CCANNNNNTGG	2 cut(s)	240, 864
Vha464I	CTTAAG	1 cut(s)	418
VpaK11BI	GGWCC	3 cut(s)	231, 345, 1993
XagI	CCTNNNNNAGG	1 cut(s)	576
XbaI	TCTAGA	1 cut(s)	644
XceI	RCATGY	2 cut(s)	2128, 2334
XcmI	CCANNNNNNNNNTGG	2 cut(s)	241, 1858
XmiI	GTMKAC	1 cut(s)	2359
XmnI	GAANNNNTTC	1 cut(s)	1162
XspI	CTAG	4 cut(s)	645, 1020, 1074, 1901
ZrmI	AGTACT	3 cut(s)	439, 1052, 1072
Zsp2I	ATGCAT	3 cut(s)	622, 816, 2317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.