Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0000530

Physical Location & Seq

Genomic Coordinates Forward (+)

27788499 .. 27790178

Gene Structure 1680 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1232100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGTGGAGGGCATTTGCCGAAGGCACTGTTTTCAACTCTTCAACCATGCTGATCCTGCGTTGGAAGATCTCAGCCAAGCCCTCCCCTCTCCTCCACTCAATCACCACCGTCTCCTTCTCCTCCTCCGCCTCCACCTTCACCCCCGCCGCCACCGCCACCGCCGATTTCCTCCACTCATACACCGTGACCCCTCCAATCCAACCCTGGCCTCGACGCCTCTACCCAAAGCACCTCATCTCCCTCATCGCCCACCAACCCAACCTCGACCTCGCCCTCCAAATCTTCCACCACGCCTCCAAATTCCATCCCGGATTTTCCCACAATTACCACACCTATCACGCCATCCTCAACCGCCTCTCCCGTTCCCGCGCTTTCCACCGCATGATCGACCCCCTCCTCTCCGACCTCAAAAACTCCCAAATCCAATGCTCCGAAGACATTTTCATCACCCTAATTCGCAATTTCGGCGTTTTGGGTCGCCCCAAACTCGCCTTCAAAGCCTTTCTCGACGTTCCGAATTTCGGAGTTCAGCGCTCTGTGAAGGCCCTGAACGAATTGTTGAACGCTCTTGTTAAGAACAGTGAGTACGGTTTGGTTCACTCTGTGTTCAAGAATTGTGGGCAGAGATTTGGGGTTATGCCCAATTTATCCACTTGTAATATTCTGATCAAAGCGCTCTGCAAGAAGAACGATGTCGAGACTGCACTCAAGGTGCTCGACGAAATGCCTGCAATGGGGTTTGTCCCGAATGTGGTGACTTATACCACGATTATTGGCGGGTATGTTTCGCGGGGTGATATGGTTGGGGCAAAGAGAGTTTTTGGGGAGGTTTTGGATAGAGGGTGGTATCCGGATGCGACTACTTATACGGTTTTGATGGATGGGTTTGTTAAGCAAGGGAAGTTGGTTGATGCCGTTAAGGTCATGGACGAGATGGAGGAAAATAAGGTCGGGGCAAATGAGGTTACTTATGGGGTTATGGTTGAAGCTTATTGTAAGGAGAAGAAGTCGGGCGAAGCTGTTAATTTGCTTAATGACATGCTTGCGAAAGGGTATATACCAAGCTCCACGCTTTGCTGTAAGGTGATCGATGTTTTGTGTCGTGAAGGGAAGGTGGAGGATGGTTATGAATTGTGGAAGAAGCTTTTGAAGAAGAATTGCACACCCGATAATGCAGTCTCAAGCACGCTCATACACTGGTTTTGTGAGAAGGGAAAAGTATGGGAAGCTAAGAAACTGTTTGATCAGCTTGACACAGAGTCCATTCCGAGCGTCATGACGTACAACATGCTTATTGCGGGAATGTGTGAAGCGGGGGAGTTGTGTGAGGCGGGGAGGTTGTGGGATGACATGGTGGAGAAAGGGTGTACTCCGAATGCTTTTACTTATAGTATGTTGATCAAAGGATTTTGTAAAATTGGAAAAGCAGAGGAGGGGATTAAGATTTTGGAGGAGATGTTGGATAAGGTCTGTTTGCCTAACAAGTCTACTTATGTTATGTTGATTGAGGGGCTCTGTGACTCGGGAAAGGAAGCGGAAGTCACAAAAGTTGTTTCAATGGCAATGTCAAGCGGAGACGCAAACGTTGCTTCCTGGGATCTTTTAGTTACTAAGTTTGTTGGTGATTCGGATACTGGGGGAAATCTTCTGGACAGGATACTACTGGAGAATGTTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

560

Amino Acids

62.14

Weight (kDa)

7.16

Isoelectric Point (pI)

27.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	204 - 263	1.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	211 - 242	3.3e-09	PPR repeat
PPR_2	PF13041	214 - 261	1.3e-15	PPR repeat family
PPR	PF01535	217 - 247	1.5e-06	PPR repeat
PPR_1	PF12854	245 - 276	6.1e-06	PPR repeat
PPR_2	PF13041	249 - 298	1.1e-13	PPR repeat family
PPR_3	PF13812	272 - 333	2.5e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	283 - 313	6.5e-07	PPR repeat
PPR_2	PF13041	288 - 333	6.4e-12	PPR repeat family
PPR	PF01535	288 - 316	1.8e-06	PPR repeat
PPR_2	PF13041	320 - 356	2e-06	PPR repeat family
PPR_long	PF17177	369 - 502	5.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	423 - 452	3.4e-07	PPR repeat
PPR_3	PF13812	423 - 470	6.6e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	423 - 472	4.6e-19	PPR repeat family
PPR_3	PF13812	446 - 503	2.2e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	454 - 486	2.7e-11	PPR repeat
PPR	PF01535	461 - 489	3.7e-06	PPR repeat
PPR_2	PF13041	466 - 507	4.3e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16420 AT5G16420 AT5G16420 AT5G16420
fragaria_vesca	FvH4_7g08341 FvH4_7g08360
malus_domestica	MD02G1232100.v1.1 MD07G1081300.v1.1
prunus_persica	Prupe.2G106500_v2.0.a1
pyrus_communis	pycom02g20040
rosa_chinensis	RchiOBHm_Chr1g0340331 RchiOBHm_Chr1g0340431 RchiOBHm_Chr1g0340441 RchiOBHm_Chr1g0340491 RchiOBHm_Chr1g0340531 RchiOBHm_Chr1g0340541 RchiOBHm_Chr1g0340561 RchiOBHm_Chr1g0340621 RchiOBHm_Chr1g0340661 RchiOBHm_Chr1g0340691
rosa_laevigata	RLG00000029013 RLG00000029018 RLG00000029020 RLG00000029024 RLG00000029026 RLG00000029029 RLG00000029030 RLG00000029032 RLG00000029033
rosa_multiflora	Rmu_sc0000566.1_g000026 Rmu_sc0000566.1_g000034 Rmu_sc0000566.1_g000054 Rmu_sc0001836.1_g000016 Rmu_sc0001836.1_g000022 Rmu_sc0001836.1_g000023 Rmu_sc0001836.1_g000028 Rmu_sc0001836.1_g000058 Rmu_sc0001946.1_g000004 Rmu_sc0002595.1_g000001 Rmu_sc0002595.1_g000005 Rmu_sc0005167.1_g000003 Rmu_sc0005167.1_g000009 Rmu_sc0005167.1_g000018 Rmu_sc0024761.1_g000004
rosa_roxburghii	Rroxscaffold_4G00311170 Rroxscaffold_4G00311190 Rroxscaffold_4G00311250 Rroxscaffold_4G00315930 Rroxscaffold_4G00315960 Rroxscaffold_5G00353270
rosa_rugosa	Rorug01G0162000.1 Rorug01G0162500.1 Rorug01G0162800.1 Rorug01G0163000.1 Rorug01G0163400.1 Rorug01G0163700.1 Rorug01G0164100.1 Rorug01G0164300 Rorug05G0484800
rosa_samantha	Rh1AG177800 Rh1AG178000 Rh1AG178300 Rh1AG178600 Rh1AG178900 Rh1BG145300 Rh1BG145600 Rh1BG145800 Rh1BG145900 Rh1BG146000 Rh1BG146700 Rh1CG165100 Rh1CG165200 Rh1CG165400 Rh1CG165600 Rh1CG165700 Rh1CG165900 Rh1DG177500 Rh1DG177600 Rh1DG177800 Rh1DG177900 Rh1DG178000 Rh1DG178800
rosa_wichuraiana	Rw0G006210 Rw1G014800 Rw1G014890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1487
AccII	CGCG	2 cut(s)	369, 790
AccIII	TCCGGA	1 cut(s)	850
AclI	AACGTT	1 cut(s)	1584
AclWI	GGATC	2 cut(s)	46, 1605
AcsI	RAATTY	2 cut(s)	299, 517
AcyI	GRCGYC	1 cut(s)	214
AdeI	CACNNNGTG	1 cut(s)	604
AfaI	GTAC	3 cut(s)	587, 1283, 1369
AfeI	AGCGCT	2 cut(s)	533, 675
AfiI	CCNNNNNNNGG	3 cut(s)	521, 734, 751
AgsI	TTSAA	8 cut(s)	34, 42, 496, 562, 610, 986, 1150, 1557
AhdI	GACNNNNNGTC	1 cut(s)	1258
AjnI	CCWGG	2 cut(s)	203, 1592
AjuI	GAANNNNNNNTTGG	2 cut(s)	476, 508
AluBI	AGCT	6 cut(s)	989, 1019, 1065, 1144, 1229, 1249
AluI	AGCT	6 cut(s)	989, 1019, 1065, 1144, 1229, 1249
Alw21I	GWGCWC	1 cut(s)	717
Alw26I	GTCTC	4 cut(s)	115, 692, 1183, 1569
AlwI	GGATC	2 cut(s)	46, 1605
Ama87I	CYCGRG	1 cut(s)	1522
Aor13HI	TCCGGA	1 cut(s)	850
Aor51HI	AGCGCT	2 cut(s)	533, 675
AoxI	GGCC	2 cut(s)	206, 543
ApoI	RAATTY	2 cut(s)	299, 517
AspLEI	GCGC	3 cut(s)	371, 534, 676
AspS9I	GGNCC	1 cut(s)	544
AsuC2I	CCSGG	1 cut(s)	309
AsuHPI	GGTGA	7 cut(s)	94, 130, 439, 766, 806, 1096, 1634
AvaI	CYCGRG	1 cut(s)	1522
BanII	GRGCYC	1 cut(s)	1515
BbsI	GAAGAC	1 cut(s)	441
Bbv12I	GWGCWC	1 cut(s)	717
BccI	CCATC	6 cut(s)	312, 350, 871, 875, 928, 1115
BceAI	ACGGC	1 cut(s)	899
BcgI	CGANNNNNNTGC	2 cut(s)	710, 744
BciT130I	CCWGG	2 cut(s)	205, 1594
BciVI	GTATCC	3 cut(s)	858, 1624, 1650
BclI	TGATCA	3 cut(s)	666, 1243, 1398
BcnI	CCSGG	1 cut(s)	309
BcoDI	GTCTC	4 cut(s)	115, 692, 1183, 1569
BfoI	RGCGCY	2 cut(s)	535, 677
BfuI	GTATCC	3 cut(s)	858, 1624, 1650
BglII	AGATCT	1 cut(s)	66
BisI	GCNGC	1 cut(s)	147
BlsI	GCNGC	1 cut(s)	148
Bme1390I	CCNGG	3 cut(s)	205, 309, 1594
BmeRI	GACNNNNNGTC	1 cut(s)	1258
BmeT110I	CYCGRG	1 cut(s)	1522
BmgT120I	GGNCC	1 cut(s)	544
BmrFI	CCNGG	3 cut(s)	205, 309, 1594
BmrI	ACTGGG	1 cut(s)	1644
BmsI	GCATC	2 cut(s)	844, 901
BmuI	ACTGGG	1 cut(s)	1644
BpiI	GAAGAC	1 cut(s)	441
BpuEI	CTTGAG	2 cut(s)	692, 1165
BpuMI	CCSGG	1 cut(s)	309
Bsa29I	ATCGAT	1 cut(s)	1089
BsaHI	GRCGYC	1 cut(s)	214
BsaJI	CCNNGG	2 cut(s)	203, 1593
BsaWI	WCCGGW	1 cut(s)	850
Bsc4I	CCNNNNNNNGG	3 cut(s)	521, 734, 751
Bse1I	ACTGG	3 cut(s)	1202, 1639, 1668
Bse3DI	GCAATG	2 cut(s)	738, 1569
BseAI	TCCGGA	1 cut(s)	850
BseBI	CCWGG	2 cut(s)	205, 1594
BseCI	ATCGAT	1 cut(s)	1089
BseDI	CCNNGG	2 cut(s)	203, 1593
BseGI	GGATG	6 cut(s)	304, 342, 859, 886, 1126, 1351
BseLI	CCNNNNNNNGG	3 cut(s)	521, 734, 751
BseMI	GCAATG	2 cut(s)	738, 1569
BseMII	CTCAG	1 cut(s)	84
BseNI	ACTGG	3 cut(s)	1202, 1639, 1668
BseRI	GAGGAG	6 cut(s)	80, 109, 112, 386, 1445, 1466
BsgI	GTGCAG	1 cut(s)	687
Bsh1236I	CGCG	2 cut(s)	369, 790
BshFI	GGCC	2 cut(s)	208, 545
BshVI	ATCGAT	1 cut(s)	1089
BsiHKAI	GWGCWC	1 cut(s)	717
BsiHKCI	CYCGRG	1 cut(s)	1522
BsiSI	CCGG	2 cut(s)	309, 851
BslFI	GGGAC	1 cut(s)	728
BslI	CCNNNNNNNGG	3 cut(s)	521, 734, 751
BsmAI	GTCTC	4 cut(s)	115, 692, 1183, 1569
BsmBI	CGTCTC	2 cut(s)	115, 1569
BsmFI	GGGAC	1 cut(s)	728
BsmI	GAATGC	1 cut(s)	1381
BsnI	GGCC	2 cut(s)	208, 545
BsoBI	CYCGRG	1 cut(s)	1522
Bsp1286I	GDGCHC	2 cut(s)	717, 1515
Bsp13I	TCCGGA	1 cut(s)	850
Bsp143I	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
BspANI	GGCC	2 cut(s)	208, 545
BspCNI	CTCAG	1 cut(s)	83
BspDI	ATCGAT	1 cut(s)	1089
BspEI	TCCGGA	1 cut(s)	850
BspFNI	CGCG	2 cut(s)	369, 790
BspHI	TCATGA	1 cut(s)	1275
BspPI	GGATC	2 cut(s)	46, 1605
BsrDI	GCAATG	2 cut(s)	738, 1569
BsrI	ACTGG	3 cut(s)	1202, 1639, 1668
BssECI	CCNNGG	2 cut(s)	203, 1593
BssMI	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
BssNI	GRCGYC	1 cut(s)	214
Bst2UI	CCWGG	2 cut(s)	205, 1594
Bst4CI	ACNGT	7 cut(s)	28, 109, 184, 581, 590, 871, 1239
Bst6I	CTCTTC	1 cut(s)	43
BstACI	GRCGYC	1 cut(s)	214
BstAPI	GCANNNNNTGC	1 cut(s)	1586
BstC8I	GCNNGC	3 cut(s)	729, 1044, 1187
BstDEI	CTNAG	4 cut(s)	70, 1230, 1611, 1677
BstF5I	GGATG	6 cut(s)	304, 342, 859, 886, 1126, 1351
BstFNI	CGCG	2 cut(s)	369, 790
BstH2I	RGCGCY	2 cut(s)	535, 677
BstHHI	GCGC	3 cut(s)	371, 534, 676
BstKTI	GATC	8 cut(s)	54, 69, 387, 669, 1089, 1246, 1401, 1600
BstMAI	GTCTC	4 cut(s)	115, 692, 1183, 1569
BstMBI	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
BstMWI	GCNNNNNNNGC	5 cut(s)	55, 152, 465, 497, 1586
BstNI	CCWGG	2 cut(s)	205, 1594
BstNSI	RCATGY	2 cut(s)	1042, 1291
BstSCI	CCNGG	3 cut(s)	203, 307, 1592
BstUI	CGCG	2 cut(s)	369, 790
BstV2I	GAAGAC	1 cut(s)	441
BstX2I	RGATCY	2 cut(s)	66, 1597
BstYI	RGATCY	2 cut(s)	66, 1597
Bsu15I	ATCGAT	1 cut(s)	1089
BsuI	GTATCC	3 cut(s)	858, 1624, 1650
BsuRI	GGCC	2 cut(s)	208, 545
BsuTUI	ATCGAT	1 cut(s)	1089
BtgZI	GCGATG	1 cut(s)	229
BtsCI	GGATG	6 cut(s)	304, 342, 859, 886, 1126, 1351
BtsIMutI	CAGTG	3 cut(s)	24, 586, 1195
Cac8I	GCNNGC	3 cut(s)	729, 1044, 1187
CciI	TCATGA	1 cut(s)	1275
CfoI	GCGC	3 cut(s)	371, 534, 676
Cfr13I	GGNCC	1 cut(s)	544
ClaI	ATCGAT	1 cut(s)	1089
CseI	GACGC	3 cut(s)	222, 1261, 1586
Csp6I	GTAC	3 cut(s)	586, 1282, 1368
CspCI	CAANNNNNGTGG	4 cut(s)	598, 633, 754, 789
CviAII	CATG	7 cut(s)	46, 382, 925, 1039, 1276, 1288, 1351
CviQI	GTAC	3 cut(s)	586, 1282, 1368
DdeI	CTNAG	4 cut(s)	70, 1230, 1611, 1677
DpnI	GATC	8 cut(s)	53, 68, 386, 668, 1088, 1245, 1400, 1599
DpnII	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
DraIII	CACNNNGTG	1 cut(s)	604
DriI	GACNNNNNGTC	1 cut(s)	1258
Eam1104I	CTCTTC	1 cut(s)	43
Eam1105I	GACNNNNNGTC	1 cut(s)	1258
EarI	CTCTTC	1 cut(s)	43
EciI	GGCGGA	1 cut(s)	115
Eco24I	GRGCYC	1 cut(s)	1515
Eco47III	AGCGCT	2 cut(s)	533, 675
Eco88I	CYCGRG	1 cut(s)	1522
EcoO109I	RGGNCCY	1 cut(s)	544
EcoRII	CCWGG	2 cut(s)	203, 1592
EcoT38I	GRGCYC	1 cut(s)	1515
Esp3I	CGTCTC	2 cut(s)	115, 1569
FaeI	CATG	7 cut(s)	49, 385, 928, 1042, 1279, 1291, 1354
FaqI	GGGAC	1 cut(s)	728
FatI	CATG	7 cut(s)	45, 381, 924, 1038, 1275, 1287, 1350
FauI	CCCGC	7 cut(s)	151, 374, 770, 783, 1291, 1306, 1324
FbaI	TGATCA	3 cut(s)	666, 1243, 1398
FblI	GTMKAC	1 cut(s)	1487
Fnu4HI	GCNGC	1 cut(s)	147
FokI	GGATG	6 cut(s)	291, 329, 866, 893, 1133, 1358
FriOI	GRGCYC	1 cut(s)	1515
Fsp4HI	GCNGC	1 cut(s)	147
GlaI	GCGC	3 cut(s)	370, 533, 675
GluI	GCNGC	1 cut(s)	147
HaeII	RGCGCY	2 cut(s)	535, 677
HaeIII	GGCC	2 cut(s)	208, 545
HapII	CCGG	2 cut(s)	309, 851
HgaI	GACGC	3 cut(s)	222, 1261, 1586
HhaI	GCGC	3 cut(s)	371, 534, 676
Hin1I	GRCGYC	1 cut(s)	214
Hin1II	CATG	7 cut(s)	49, 385, 928, 1042, 1279, 1291, 1354
Hin6I	GCGC	3 cut(s)	369, 532, 674
HinP1I	GCGC	3 cut(s)	369, 532, 674
HindIII	AAGCTT	2 cut(s)	987, 1142
HinfI	GANTC	3 cut(s)	1259, 1520, 1625
HpaII	CCGG	2 cut(s)	309, 851
HphI	GGTGA	7 cut(s)	94, 130, 439, 766, 806, 1096, 1634
Hpy166II	GTNNAC	3 cut(s)	598, 1368, 1488
Hpy188I	TCNGA	8 cut(s)	403, 433, 516, 524, 666, 1269, 1374, 1630
Hpy188III	TCNNGA	9 cut(s)	506, 610, 697, 745, 851, 1103, 1276, 1524, 1649
Hpy8I	GTNNAC	3 cut(s)	598, 1368, 1488
Hpy99I	CGWCG	3 cut(s)	216, 512, 722
HpyAV	CCTTC	8 cut(s)	14, 124, 145, 502, 535, 1100, 1105, 1204
HpyCH4III	ACNGT	7 cut(s)	28, 109, 184, 581, 590, 871, 1239
HpyCH4IV	ACGT	3 cut(s)	510, 1280, 1584
HpyCH4V	TGCA	5 cut(s)	681, 704, 731, 1161, 1175
HpyF10VI	GCNNNNNNNGC	5 cut(s)	55, 152, 465, 497, 1586
HpyF3I	CTNAG	4 cut(s)	70, 1230, 1611, 1677
HpySE526I	ACGT	3 cut(s)	510, 1280, 1584
Hsp92I	GRCGYC	1 cut(s)	214
Hsp92II	CATG	7 cut(s)	49, 385, 928, 1042, 1279, 1291, 1354
HspAI	GCGC	3 cut(s)	369, 532, 674
Kpn2I	TCCGGA	1 cut(s)	850
Ksp22I	TGATCA	3 cut(s)	666, 1243, 1398
Kzo9I	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
LmnI	GCTCC	2 cut(s)	434, 1070
LweI	GCATC	2 cut(s)	844, 901
MaeII	ACGT	3 cut(s)	510, 1280, 1584
MaeIII	GTNAC	7 cut(s)	184, 754, 964, 1517, 1540, 1606, 1672
MalI	GATC	8 cut(s)	53, 68, 386, 668, 1088, 1245, 1400, 1599
MboI	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
MflI	RGATCY	2 cut(s)	66, 1597
MhlI	GDGCHC	2 cut(s)	717, 1515
MlyI	GAGTC	2 cut(s)	1268, 1514
MmeI	TCCRAC	4 cut(s)	41, 223, 426, 1440
MroI	TCCGGA	1 cut(s)	850
MseI	TTAA	6 cut(s)	573, 891, 918, 1023, 1032, 1440
MspI	CCGG	2 cut(s)	309, 851
MspR9I	CCNGG	3 cut(s)	205, 309, 1594
Mva1269I	GAATGC	1 cut(s)	1381
MvaI	CCWGG	2 cut(s)	205, 1594
MvnI	CGCG	2 cut(s)	369, 790
MwoI	GCNNNNNNNGC	5 cut(s)	55, 152, 465, 497, 1586
NciI	CCSGG	1 cut(s)	309
NdeII	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
NlaIII	CATG	7 cut(s)	49, 385, 928, 1042, 1279, 1291, 1354
NmuCI	GTSAC	4 cut(s)	184, 754, 1517, 1540
NspI	RCATGY	2 cut(s)	1042, 1291
PagI	TCATGA	1 cut(s)	1275
PctI	GAATGC	1 cut(s)	1381
PfeI	GAWTC	1 cut(s)	1625
PfoI	TCCNGGA	1 cut(s)	307
PkrI	GCNGC	1 cut(s)	148
PleI	GAGTC	2 cut(s)	1267, 1514
PpsI	GAGTC	2 cut(s)	1267, 1514
Psp1406I	AACGTT	1 cut(s)	1584
Psp6I	CCWGG	2 cut(s)	203, 1592
PspGI	CCWGG	2 cut(s)	203, 1592
PspPI	GGNCC	1 cut(s)	544
PsrI	GAACNNNNNNTAC	2 cut(s)	569, 601
PsuI	RGATCY	2 cut(s)	66, 1597
RsaI	GTAC	3 cut(s)	587, 1283, 1369
RsaNI	GTAC	3 cut(s)	586, 1282, 1368
SaqAI	TTAA	6 cut(s)	573, 891, 918, 1023, 1032, 1440
SatI	GCNGC	1 cut(s)	147
Sau3AI	GATC	8 cut(s)	51, 66, 384, 666, 1086, 1243, 1398, 1597
Sau96I	GGNCC	1 cut(s)	544
SchI	GAGTC	2 cut(s)	1268, 1514
ScrFI	CCNGG	3 cut(s)	205, 309, 1594
SduI	GDGCHC	2 cut(s)	717, 1515
SfaNI	GCATC	2 cut(s)	844, 901
SmlI	CTYRAG	2 cut(s)	707, 1180
SmoI	CTYRAG	2 cut(s)	707, 1180
SspI	AATATT	1 cut(s)	661
StyD4I	CCNGG	3 cut(s)	203, 307, 1592
TaaI	ACNGT	7 cut(s)	28, 109, 184, 581, 590, 871, 1239
TaiI	ACGT	3 cut(s)	513, 1283, 1587
TaqI	TCGA	7 cut(s)	211, 264, 387, 507, 696, 717, 1089
TatI	WGTACW	1 cut(s)	1367
TauI	GCSGC	1 cut(s)	149
TfiI	GAWTC	1 cut(s)	1625
Tru1I	TTAA	6 cut(s)	573, 891, 918, 1023, 1032, 1440
Tru9I	TTAA	6 cut(s)	573, 891, 918, 1023, 1032, 1440
TscAI	CASTG	3 cut(s)	31, 586, 1202
TseFI	GTSAC	4 cut(s)	184, 754, 1517, 1540
Tsp45I	GTSAC	4 cut(s)	184, 754, 1517, 1540
TspDTI	ATGAA	2 cut(s)	433, 1143
TspRI	CASTG	3 cut(s)	31, 586, 1202
XapI	RAATTY	2 cut(s)	299, 517
XceI	RCATGY	2 cut(s)	1042, 1291
XcmI	CCANNNNNNNNNTGG	1 cut(s)	201
XmiI	GTMKAC	1 cut(s)	1487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.