Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000566.1

Orthogroup ID

OG0000530

Physical Location & Seq

Genomic Coordinates Reverse (-)

161548 .. 165429

Gene Structure 3882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000566.1_g000034.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

atggatacgccaaaatggcttcgtatcccgtatcgatccgggatacgggtacgatacgcacaaatacgcgtggatacgtgtggatacgcggatccgtatttgggtacggcctggatacgtgcgtatcctaatcagatacgtataaatgtaaatcaactggatacgcggggcttcaggccttcagcgccgctttggtcgttcactcgctcctctgctcctcttcttcgcaagttgcaggtaagatcaatcaatcaagttttctcctcttcttcgatccgcttggagcttcagttagactgctccagtgcttccggtgaccataattaccacacctacaacgccatcatccgccgcctcctccgctcccgcgcttttcacctcatctccgaccccctcctctccgacctccgcacctccaatctccgatgcagcgaagacctattcatctctctaatccgaaactacggcgtcgtttcacgccccaaactcgcattcaagacatttatcaccattccgaaattcggcgcccaacgatccttgaatgcgttgctgaacgctttggttcagaatcacgagtatagattggttcactcggtgtttcggaactgtagggagaggttcggggtggccccgaatgtgtttagttgtaatatattgatcaaagcactgtgtaagagaaatgatttggagactgcacaccagaagtccggtgaagcggttaatttgcttgatgatatggtggagaagaggtatataccgagctcggctctctgttgtaaggtgattgatgttttgtgttgcgaagggaaggtggaggatgcttgtgaactgtggaagaggcttttgaagaagaattgcacaccggataatgcagtattgggcacgctcatatactggctttgtaagaagggagaaatgtgggaagccaggaaattgtttgatcagattgagatgagtgagcctccggatgtcatgacttacaacgtgcttatttctggaatgtgtgaagtgggggagttttgtgaggctgggaggttgtgggatgacatggtggagaaaggatgttctccgaattcttttacatataatgtattctgtaagattggaaaagcgaaggagggaattaggattttggacgagatgttcgaaaaagactgtttgccaaacaagtctacttatgctatgttgatcgaggggctctgtgactcaggagaggaagctgaaatcactacagtattatctatggcaatgtcaagtggagacattgacagtgattcctgggatcttttccttactaaggtgttccttattggagtcgagtcttcaggatgcaagatgggcactgatggtggatattggaaggggtgccattcttattcctttactaatgaactctatctcgtgtctatttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

470

Amino Acids

53.35

Weight (kDa)

8.14

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16420 AT5G16420 AT5G16420 AT5G16420
fragaria_vesca	FvH4_7g08341 FvH4_7g08360
malus_domestica	MD02G1232100.v1.1 MD07G1081300.v1.1
prunus_persica	Prupe.2G106500_v2.0.a1
pyrus_communis	pycom02g20040
rosa_chinensis	RchiOBHm_Chr1g0340331 RchiOBHm_Chr1g0340431 RchiOBHm_Chr1g0340441 RchiOBHm_Chr1g0340491 RchiOBHm_Chr1g0340531 RchiOBHm_Chr1g0340541 RchiOBHm_Chr1g0340561 RchiOBHm_Chr1g0340621 RchiOBHm_Chr1g0340661 RchiOBHm_Chr1g0340691
rosa_laevigata	RLG00000029013 RLG00000029018 RLG00000029020 RLG00000029024 RLG00000029026 RLG00000029029 RLG00000029030 RLG00000029032 RLG00000029033
rosa_multiflora	Rmu_sc0000566.1_g000026 Rmu_sc0000566.1_g000034 Rmu_sc0000566.1_g000054 Rmu_sc0001836.1_g000016 Rmu_sc0001836.1_g000022 Rmu_sc0001836.1_g000023 Rmu_sc0001836.1_g000028 Rmu_sc0001836.1_g000058 Rmu_sc0001946.1_g000004 Rmu_sc0002595.1_g000001 Rmu_sc0002595.1_g000005 Rmu_sc0005167.1_g000003 Rmu_sc0005167.1_g000009 Rmu_sc0005167.1_g000018 Rmu_sc0024761.1_g000004
rosa_roxburghii	Rroxscaffold_4G00311170 Rroxscaffold_4G00311190 Rroxscaffold_4G00311250 Rroxscaffold_4G00315930 Rroxscaffold_4G00315960 Rroxscaffold_5G00353270
rosa_rugosa	Rorug01G0162000.1 Rorug01G0162500.1 Rorug01G0162800.1 Rorug01G0163000.1 Rorug01G0163400.1 Rorug01G0163700.1 Rorug01G0164100.1 Rorug01G0164300 Rorug05G0484800
rosa_samantha	Rh1AG177800 Rh1AG178000 Rh1AG178300 Rh1AG178600 Rh1AG178900 Rh1BG145300 Rh1BG145600 Rh1BG145800 Rh1BG145900 Rh1BG146000 Rh1BG146700 Rh1CG165100 Rh1CG165200 Rh1CG165400 Rh1CG165600 Rh1CG165700 Rh1CG165900 Rh1DG177500 Rh1DG177600 Rh1DG177800 Rh1DG177900 Rh1DG178000 Rh1DG178800
rosa_wichuraiana	Rw0G006210 Rw1G014800 Rw1G014890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	226
AccB1I	GGYRCC	2 cut(s)	524, 1365
AccBSI	CCGCTC	1 cut(s)	363
AccI	GTMKAC	1 cut(s)	1172
AccII	CGCG	4 cut(s)	69, 89, 166, 369
AccIII	TCCGGA	1 cut(s)	964
AclWI	GGATC	6 cut(s)	30, 86, 99, 268, 528, 1290
AcsI	RAATTY	2 cut(s)	518, 1072
AcuI	CTGAAG	4 cut(s)	157, 165, 272, 1308
AcyI	GRCGYC	2 cut(s)	468, 525
AdeI	CACNNNGTG	1 cut(s)	595
AfaI	GTAC	2 cut(s)	51, 106
AfiI	CCNNNNNNNGG	4 cut(s)	45, 101, 521, 1297
AflIII	ACRYGT	2 cut(s)	67, 77
AgsI	TTSAA	3 cut(s)	496, 541, 847
AjnI	CCWGG	3 cut(s)	110, 926, 1277
AjuI	GAANNNNNNNTTGG	2 cut(s)	476, 508
AloI	GAACNNNNNNTCC	2 cut(s)	1127, 1159
AluBI	AGCT	3 cut(s)	286, 762, 1220
AluI	AGCT	3 cut(s)	286, 762, 1220
Alw21I	GWGCWC	1 cut(s)	764
Alw26I	GTCTC	2 cut(s)	683, 1254
AlwI	GGATC	6 cut(s)	30, 86, 99, 268, 528, 1290
Aor13HI	TCCGGA	1 cut(s)	964
AoxI	GGCC	3 cut(s)	108, 176, 627
ApeKI	GCWGC	1 cut(s)	429
ApoI	RAATTY	2 cut(s)	518, 1072
ArsI	GACNNNNNNTTYG	2 cut(s)	1127, 1159
AspLEI	GCGC	3 cut(s)	187, 371, 527
AspS9I	GGNCC	1 cut(s)	628
AsuC2I	CCSGG	1 cut(s)	40
AsuHPI	GGTGA	5 cut(s)	326, 368, 499, 722, 793
AsuII	TTCGAA	1 cut(s)	1146
BaeGI	GKGCMC	2 cut(s)	884, 1343
BaeI	ACNNNNGTAYC	4 cut(s)	107, 107, 140, 140
BamHI	GGATCC	1 cut(s)	91
BanI	GGYRCC	2 cut(s)	524, 1365
BanII	GRGCYC	2 cut(s)	764, 1200
BauI	CACGAG	2 cut(s)	572, 1400
BbsI	GAAGAC	2 cut(s)	441, 1314
Bbv12I	GWGCWC	1 cut(s)	764
BbvI	GCAGC	1 cut(s)	441
BccI	CCATC	3 cut(s)	350, 1330, 1340
BceAI	ACGGC	2 cut(s)	123, 481
BciT130I	CCWGG	3 cut(s)	112, 928, 1279
BciVI	GTATCC	7 cut(s)	35, 36, 67, 77, 108, 135, 154
BclI	TGATCA	2 cut(s)	657, 940
BcnI	CCSGG	1 cut(s)	40
BcoDI	GTCTC	2 cut(s)	683, 1254
BfmI	CTRYAG	2 cut(s)	607, 1230
BfoI	RGCGCY	2 cut(s)	188, 528
BfuAI	ACCTGC	1 cut(s)	226
BfuI	GTATCC	7 cut(s)	35, 36, 67, 77, 108, 135, 154
BglI	GCCNNNNNGGC	1 cut(s)	16
BisI	GCNGC	3 cut(s)	188, 352, 430
BlsI	GCNGC	3 cut(s)	189, 353, 431
Bme1390I	CCNGG	4 cut(s)	40, 112, 928, 1279
BmgT120I	GGNCC	1 cut(s)	628
BmiI	GGNNCC	4 cut(s)	93, 526, 630, 1367
BmrFI	CCNGG	4 cut(s)	40, 112, 928, 1279
BmsI	GCATC	3 cut(s)	416, 808, 1319
BpiI	GAAGAC	2 cut(s)	441, 1314
BplI	GAGNNNNNCTC	4 cut(s)	751, 783, 946, 978
BpmI	CTGGAG	1 cut(s)	286
Bpu14I	TTCGAA	1 cut(s)	1146
BpuMI	CCSGG	1 cut(s)	40
Bsa29I	ATCGAT	1 cut(s)	34
BsaAI	YACGTR	3 cut(s)	78, 119, 140
BsaHI	GRCGYC	2 cut(s)	468, 525
BsaJI	CCNNGG	1 cut(s)	1278
BsaWI	WCCGGW	4 cut(s)	311, 707, 862, 964
BsaXI	ACNNNNNCTCC	6 cut(s)	275, 305, 368, 398, 734, 764
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 101, 521, 1297
Bse1I	ACTGG	3 cut(s)	162, 303, 899
Bse3DI	GCAATG	1 cut(s)	1254
BseAI	TCCGGA	1 cut(s)	964
BseBI	CCWGG	3 cut(s)	112, 928, 1279
BseCI	ATCGAT	1 cut(s)	34
BseDI	CCNNGG	1 cut(s)	1278
BseGI	GGATG	6 cut(s)	345, 823, 973, 1048, 1067, 1334
BseLI	CCNNNNNNNGG	4 cut(s)	45, 101, 521, 1297
BseMI	GCAATG	1 cut(s)	1254
BseMII	CTCAG	1 cut(s)	1221
BseNI	ACTGG	3 cut(s)	162, 303, 899
BseRI	GAGGAG	5 cut(s)	199, 207, 253, 347, 386
BseSI	GKGCMC	2 cut(s)	884, 1343
BseXI	GCAGC	1 cut(s)	441
BseYI	CCCAGC	1 cut(s)	1028
BsgI	GTGCAG	1 cut(s)	678
Bsh1236I	CGCG	4 cut(s)	69, 89, 166, 369
BshFI	GGCC	3 cut(s)	110, 178, 629
BshNI	GGYRCC	2 cut(s)	524, 1365
BshVI	ATCGAT	1 cut(s)	34
BsiHKAI	GWGCWC	1 cut(s)	764
BsiSI	CCGG	5 cut(s)	39, 312, 708, 863, 965
BslI	CCNNNNNNNGG	4 cut(s)	45, 101, 521, 1297
BsmAI	GTCTC	2 cut(s)	683, 1254
BsmI	GAATGC	2 cut(s)	491, 547
BsnI	GGCC	3 cut(s)	110, 178, 629
Bsp119I	TTCGAA	1 cut(s)	1146
Bsp1286I	GDGCHC	4 cut(s)	764, 884, 1200, 1343
Bsp13I	TCCGGA	1 cut(s)	964
Bsp143I	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
BspANI	GGCC	3 cut(s)	110, 178, 629
BspCNI	CTCAG	1 cut(s)	1220
BspDI	ATCGAT	1 cut(s)	34
BspEI	TCCGGA	1 cut(s)	964
BspFNI	CGCG	4 cut(s)	69, 89, 166, 369
BspHI	TCATGA	1 cut(s)	972
BspLI	GGNNCC	4 cut(s)	93, 526, 630, 1367
BspMI	ACCTGC	1 cut(s)	226
BspPI	GGATC	6 cut(s)	30, 86, 99, 268, 528, 1290
BspT104I	TTCGAA	1 cut(s)	1146
BspT107I	GGYRCC	2 cut(s)	524, 1365
BsrBI	CCGCTC	1 cut(s)	363
BsrDI	GCAATG	1 cut(s)	1254
BsrI	ACTGG	3 cut(s)	162, 303, 899
BssECI	CCNNGG	1 cut(s)	1278
BssMI	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
BssNI	GRCGYC	2 cut(s)	468, 525
BssSI	CACGAG	2 cut(s)	572, 1400
Bst2BI	CACGAG	2 cut(s)	572, 1400
Bst2UI	CCWGG	3 cut(s)	112, 928, 1279
Bst4CI	ACNGT	6 cut(s)	608, 669, 831, 1157, 1234, 1271
Bst6I	CTCTTC	4 cut(s)	225, 271, 740, 830
BstACI	GRCGYC	2 cut(s)	468, 525
BstBAI	YACGTR	3 cut(s)	78, 119, 140
BstBI	TTCGAA	1 cut(s)	1146
BstC8I	GCNNGC	1 cut(s)	884
BstDEI	CTNAG	2 cut(s)	1207, 1296
BstEII	GGTNACC	1 cut(s)	314
BstENI	CCTNNNNNAGG	1 cut(s)	1295
BstF5I	GGATG	6 cut(s)	345, 823, 973, 1048, 1067, 1334
BstFNI	CGCG	4 cut(s)	69, 89, 166, 369
BstH2I	RGCGCY	2 cut(s)	188, 528
BstHHI	GCGC	3 cut(s)	187, 371, 527
BstKTI	GATC	9 cut(s)	38, 94, 245, 276, 536, 660, 943, 1191, 1285
BstMAI	GTCTC	2 cut(s)	683, 1254
BstMBI	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
BstMWI	GCNNNNNNNGC	4 cut(s)	16, 184, 360, 1338
BstNI	CCWGG	3 cut(s)	112, 928, 1279
BstPI	GGTNACC	1 cut(s)	314
BstSCI	CCNGG	4 cut(s)	38, 110, 926, 1277
BstSFI	CTRYAG	2 cut(s)	607, 1230
BstSLI	GKGCMC	2 cut(s)	884, 1343
BstSNI	TACGTA	1 cut(s)	140
BstUI	CGCG	4 cut(s)	69, 89, 166, 369
BstV1I	GCAGC	1 cut(s)	441
BstV2I	GAAGAC	2 cut(s)	441, 1314
BstX2I	RGATCY	2 cut(s)	91, 1282
BstYI	RGATCY	2 cut(s)	91, 1282
Bsu15I	ATCGAT	1 cut(s)	34
BsuI	GTATCC	7 cut(s)	35, 36, 67, 77, 108, 135, 154
BsuRI	GGCC	3 cut(s)	110, 178, 629
BsuTUI	ATCGAT	1 cut(s)	34
BtsCI	GGATG	6 cut(s)	345, 823, 973, 1048, 1067, 1334
BtsIMutI	CAGTG	4 cut(s)	310, 665, 1276, 1341
BveI	ACCTGC	1 cut(s)	226
Cac8I	GCNNGC	1 cut(s)	884
CciI	TCATGA	1 cut(s)	972
CfoI	GCGC	3 cut(s)	187, 371, 527
Cfr13I	GGNCC	1 cut(s)	628
ClaI	ATCGAT	1 cut(s)	34
CseI	GACGC	1 cut(s)	457
Csp6I	GTAC	2 cut(s)	50, 105
CviAII	CATG	2 cut(s)	973, 1048
CviQI	GTAC	2 cut(s)	50, 105
DdeI	CTNAG	2 cut(s)	1207, 1296
DinI	GGCGCC	1 cut(s)	526
DpnI	GATC	9 cut(s)	37, 93, 244, 275, 535, 659, 942, 1190, 1284
DpnII	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
DraIII	CACNNNGTG	1 cut(s)	595
Eam1104I	CTCTTC	4 cut(s)	225, 271, 740, 830
EarI	CTCTTC	4 cut(s)	225, 271, 740, 830
EciI	GGCGGA	1 cut(s)	338
Ecl136II	GAGCTC	1 cut(s)	762
Eco105I	TACGTA	1 cut(s)	140
Eco147I	AGGCCT	1 cut(s)	178
Eco24I	GRGCYC	2 cut(s)	764, 1200
Eco53kI	GAGCTC	1 cut(s)	762
Eco57I	CTGAAG	4 cut(s)	157, 165, 272, 1308
Eco91I	GGTNACC	1 cut(s)	314
EcoICRI	GAGCTC	1 cut(s)	762
EcoNI	CCTNNNNNAGG	1 cut(s)	1295
EcoO65I	GGTNACC	1 cut(s)	314
EcoRI	GAATTC	1 cut(s)	1072
EcoRII	CCWGG	3 cut(s)	110, 926, 1277
EcoT38I	GRGCYC	2 cut(s)	764, 1200
EgeI	GGCGCC	1 cut(s)	526
EheI	GGCGCC	1 cut(s)	526
FaeI	CATG	2 cut(s)	976, 1051
FatI	CATG	2 cut(s)	972, 1047
FauI	CCCGC	2 cut(s)	159, 374
FbaI	TGATCA	2 cut(s)	657, 940
FblI	GTMKAC	1 cut(s)	1172
Fnu4HI	GCNGC	3 cut(s)	188, 352, 430
FokI	GGATG	6 cut(s)	332, 830, 980, 1055, 1074, 1341
FriOI	GRGCYC	2 cut(s)	764, 1200
Fsp4HI	GCNGC	3 cut(s)	188, 352, 430
GlaI	GCGC	3 cut(s)	186, 370, 526
GluI	GCNGC	3 cut(s)	188, 352, 430
GsaI	CCCAGC	1 cut(s)	1032
GsuI	CTGGAG	1 cut(s)	286
HaeII	RGCGCY	2 cut(s)	188, 528
HaeIII	GGCC	3 cut(s)	110, 178, 629
HapII	CCGG	5 cut(s)	39, 312, 708, 863, 965
HgaI	GACGC	1 cut(s)	457
HhaI	GCGC	3 cut(s)	187, 371, 527
Hin1I	GRCGYC	2 cut(s)	468, 525
Hin1II	CATG	2 cut(s)	976, 1051
Hin6I	GCGC	3 cut(s)	185, 369, 525
HinP1I	GCGC	3 cut(s)	185, 369, 525
HinfI	GANTC	5 cut(s)	568, 1205, 1274, 1314, 1319
HpaII	CCGG	5 cut(s)	39, 312, 708, 863, 965
HphI	GGTGA	5 cut(s)	326, 368, 499, 722, 793
Hpy166II	GTNNAC	4 cut(s)	201, 589, 827, 1173
Hpy188III	TCNNGA	7 cut(s)	496, 572, 965, 973, 996, 1209, 1326
Hpy8I	GTNNAC	4 cut(s)	201, 589, 827, 1173
Hpy99I	CGWCG	1 cut(s)	473
HpyAV	CCTTC	6 cut(s)	189, 797, 802, 901, 1108, 1354
HpyCH4III	ACNGT	6 cut(s)	608, 669, 831, 1157, 1234, 1271
HpyCH4IV	ACGT	4 cut(s)	77, 118, 139, 984
HpyCH4V	TGCA	6 cut(s)	235, 429, 695, 858, 872, 1332
HpyF10VI	GCNNNNNNNGC	4 cut(s)	16, 184, 360, 1338
HpyF3I	CTNAG	2 cut(s)	1207, 1296
HpySE526I	ACGT	4 cut(s)	77, 118, 139, 984
Hsp92I	GRCGYC	2 cut(s)	468, 525
Hsp92II	CATG	2 cut(s)	976, 1051
HspAI	GCGC	3 cut(s)	185, 369, 525
KasI	GGCGCC	1 cut(s)	524
Kpn2I	TCCGGA	1 cut(s)	964
Ksp22I	TGATCA	2 cut(s)	657, 940
Kzo9I	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
LmnI	GCTCC	5 cut(s)	212, 220, 283, 305, 368
Lsp1109I	GCAGC	1 cut(s)	441
LweI	GCATC	3 cut(s)	416, 808, 1319
MaeII	ACGT	4 cut(s)	77, 118, 139, 984
MaeIII	GTNAC	2 cut(s)	314, 1202
MalI	GATC	9 cut(s)	37, 93, 244, 275, 535, 659, 942, 1190, 1284
MbiI	CCGCTC	1 cut(s)	363
MboI	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
MflI	RGATCY	2 cut(s)	91, 1282
MhlI	GDGCHC	4 cut(s)	764, 884, 1200, 1343
MluCI	AATT	7 cut(s)	322, 518, 721, 853, 932, 1072, 1122
MluI	ACGCGT	1 cut(s)	67
Mly113I	GGCGCC	1 cut(s)	525
MlyI	GAGTC	3 cut(s)	1199, 1323, 1328
MmeI	TCCRAC	2 cut(s)	411, 426
MroI	TCCGGA	1 cut(s)	964
MseI	TTAA	2 cut(s)	720, 1411
MspI	CCGG	5 cut(s)	39, 312, 708, 863, 965
MspR9I	CCNGG	4 cut(s)	40, 112, 928, 1279
Mva1269I	GAATGC	2 cut(s)	491, 547
MvaI	CCWGG	3 cut(s)	112, 928, 1279
MvnI	CGCG	4 cut(s)	69, 89, 166, 369
MwoI	GCNNNNNNNGC	4 cut(s)	16, 184, 360, 1338
NarI	GGCGCC	1 cut(s)	525
NciI	CCSGG	1 cut(s)	40
NdeII	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
NlaIII	CATG	2 cut(s)	976, 1051
NlaIV	GGNNCC	4 cut(s)	93, 526, 630, 1367
NmeAIII	GCCGAG	1 cut(s)	743
NmuCI	GTSAC	2 cut(s)	314, 1202
NspV	TTCGAA	1 cut(s)	1146
PagI	TCATGA	1 cut(s)	972
PceI	AGGCCT	1 cut(s)	178
PcsI	WCGNNNNNNNCGW	1 cut(s)	1143
PctI	GAATGC	2 cut(s)	491, 547
PfeI	GAWTC	2 cut(s)	568, 1274
PfoI	TCCNGGA	1 cut(s)	38
PkrI	GCNGC	3 cut(s)	189, 353, 431
PleI	GAGTC	3 cut(s)	1199, 1322, 1327
PluTI	GGCGCC	1 cut(s)	528
PpsI	GAGTC	3 cut(s)	1199, 1322, 1327
Ppu21I	YACGTR	3 cut(s)	78, 119, 140
Psp124BI	GAGCTC	1 cut(s)	764
Psp6I	CCWGG	3 cut(s)	110, 926, 1277
PspEI	GGTNACC	1 cut(s)	314
PspFI	CCCAGC	1 cut(s)	1028
PspGI	CCWGG	3 cut(s)	110, 926, 1277
PspN4I	GGNNCC	4 cut(s)	93, 526, 630, 1367
PspPI	GGNCC	1 cut(s)	628
PsuI	RGATCY	2 cut(s)	91, 1282
RsaI	GTAC	2 cut(s)	51, 106
RsaNI	GTAC	2 cut(s)	50, 105
SacI	GAGCTC	1 cut(s)	764
SaqAI	TTAA	2 cut(s)	720, 1411
SatI	GCNGC	3 cut(s)	188, 352, 430
Sau3AI	GATC	9 cut(s)	35, 91, 242, 273, 533, 657, 940, 1188, 1282
Sau96I	GGNCC	1 cut(s)	628
SchI	GAGTC	3 cut(s)	1199, 1323, 1328
ScrFI	CCNGG	4 cut(s)	40, 112, 928, 1279
SduI	GDGCHC	4 cut(s)	764, 884, 1200, 1343
SfaNI	GCATC	3 cut(s)	416, 808, 1319
SfcI	CTRYAG	2 cut(s)	607, 1230
SfoI	GGCGCC	1 cut(s)	526
SfuI	TTCGAA	1 cut(s)	1146
SnaBI	TACGTA	1 cut(s)	140
Sse9I	AATT	7 cut(s)	322, 518, 721, 853, 932, 1072, 1122
SseBI	AGGCCT	1 cut(s)	178
SspDI	GGCGCC	1 cut(s)	524
SstI	GAGCTC	1 cut(s)	764
StuI	AGGCCT	1 cut(s)	178
StyD4I	CCNGG	4 cut(s)	38, 110, 926, 1277
TaaI	ACNGT	6 cut(s)	608, 669, 831, 1157, 1234, 1271
TaiI	ACGT	4 cut(s)	80, 121, 142, 987
TaqI	TCGA	5 cut(s)	34, 272, 1146, 1191, 1317
TasI	AATT	7 cut(s)	322, 518, 721, 853, 932, 1072, 1122
TauI	GCSGC	2 cut(s)	190, 354
TfiI	GAWTC	2 cut(s)	568, 1274
Tru1I	TTAA	2 cut(s)	720, 1411
Tru9I	TTAA	2 cut(s)	720, 1411
TscAI	CASTG	4 cut(s)	310, 672, 1276, 1348
TseFI	GTSAC	2 cut(s)	314, 1202
TseI	GCWGC	1 cut(s)	429
Tsp45I	GTSAC	2 cut(s)	314, 1202
TspDTI	ATGAA	2 cut(s)	433, 1404
TspGWI	ACGGA	1 cut(s)	84
TspRI	CASTG	4 cut(s)	310, 672, 1276, 1348
XagI	CCTNNNNNAGG	1 cut(s)	1295
XapI	RAATTY	2 cut(s)	518, 1072
XmiI	GTMKAC	1 cut(s)	1172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.