Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000530

Physical Location & Seq

Genomic Coordinates Forward (+)

33197440 .. 33199052

Gene Structure 1613 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G014890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGCTGCTTCGCCGGAACCTCTCCCCCATACCCTTCTCTCTCCTCCACTCAATCACCGCCGTCCCCTTCTCCACCTCCACCTCCACCTCCACTCCGCCGCCACTGGCCCACCACCTCCTCCACCCAAGGCGCCTCATCTCCCTCATCACCCGCGAGCCCAAACTCGACCTCGCCCTCCAAATCTTCCACCACGCCTCCAAATACCACCCCGGATTCCACCATAACTACCACGCCATCATCCGCCGCCTCCTTCGCTCCCGCGCTTTTCACCTCATCGACCCCCTCCTCTCCGACCTCCGCGCCTCCAATCTCCGATGCAGCGATGACCTCTTCATCTCCCTAATCGCAATACGGCACATTATCACCATTCCGAAATTCGGCGCCCAACGATCCGTGAGGTCCTTGAATGCGTTGCTGAACGCTTTGGTTCAGAATCACGAGTATAGATTGGGTTCACTCGCACTGTGTAAGAGAAATGATTTGGAGACTGCACACCAGGTGCTCGATGAAATGCCTGCCATGGGATTTGTGCCCAATGTGGTGACTTTTACTACCATTTTGGGTGGTTATGTGTCGCGGCGCGATATGGATGGTGCCAAGAGGGTGTTTGGTGAGATTTTGGACAGAGGGTGGTTTCCTGATGTGACTACATATACCATATTGATGGATGGGTATGTGAAGCAGGGGAAGCTGGTTGAGGCTATTAAGGTCATGGATGAGATGGAAGATAATGGGATTGGCGCCAATGAGGTTACTTATGGAGTTATGATTGAAGTTTATTGTAAGGAGAAGAAGTCAGGTGAAGCTGTTAATTTGCTTAATGATATGGCGGAGAAGAGGTATATACCGAGCTCGACGCTCTGTTGTAAGGTGATTGATGTGTTGTGTTGCGAAGGGAAGGTGGAGGATGCTTGTGTACTGTGGAAGAGGCTTTTGAAGAAGAATTGCACGCCGGATAATGCCGTATTGGGCACACTCATATACTGGCTGTGTAAGAAGGGAGAAGTGTGGGAAGCCAGGAAATTGTTTGATCAGTTTGAGACGAGTGAGCCTCCAGATGTCATGACTTACAACGTGCTTATTTCTGGAATGTGTGAAGTGGGGGAGTTGTGTGAGGCGGGGAGGTTATGGGATGACATGGTGGAGAAAGGATATTCTCCGAATTCTTTTACATATAATGTATTGATCAAAGGATTCTGTAAGATTGGAAAAGCGAAGGAGGGAGTTAGGATTTTGGACGAGATATTCGAAAAAGGCTGTTTGCCAAACAAGTCTACTTATGCTATGTTGATTGAGGGGCTCTGTGACTCAGGAGAGGAAGCTGAAATCACTACAGTAATATCTATGGCAATGTCAAGTGGACACATTGACAGTGATTCCTGGGAGCTTTTCCTTACAAAGGTTATTGGTGATTTGGATTCTGGGGAAAGTGTTCTAAATAGAATACAGCTGGAGAATGCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

488

Amino Acids

54.81

Weight (kDa)

6.04

Isoelectric Point (pI)

41.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	154 - 190	3e-08	PPR repeat family
PPR_3	PF13812	167 - 226	7e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	178 - 227	6.1e-14	PPR repeat family
PPR_3	PF13812	202 - 262	2.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	210 - 242	4.7e-09	PPR repeat
PPR_2	PF13041	213 - 257	4.5e-14	PPR repeat family
PPR	PF01535	217 - 246	2.3e-08	PPR repeat
PPR_2	PF13041	249 - 285	1.8e-06	PPR repeat family
PPR_1	PF12854	314 - 345	8.3e-06	PPR repeat
PPR_2	PF13041	352 - 401	2.5e-19	PPR repeat family
PPR_1	PF12854	352 - 381	8.4e-08	PPR repeat
PPR_3	PF13812	352 - 399	7.5e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	375 - 432	6.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	383 - 414	2.7e-09	PPR repeat
PPR_2	PF13041	390 - 436	7.4e-13	PPR repeat family
PPR	PF01535	390 - 420	2e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16420 AT5G16420 AT5G16420 AT5G16420
fragaria_vesca	FvH4_7g08341 FvH4_7g08360
malus_domestica	MD02G1232100.v1.1 MD07G1081300.v1.1
prunus_persica	Prupe.2G106500_v2.0.a1
pyrus_communis	pycom02g20040
rosa_chinensis	RchiOBHm_Chr1g0340331 RchiOBHm_Chr1g0340431 RchiOBHm_Chr1g0340441 RchiOBHm_Chr1g0340491 RchiOBHm_Chr1g0340531 RchiOBHm_Chr1g0340541 RchiOBHm_Chr1g0340561 RchiOBHm_Chr1g0340621 RchiOBHm_Chr1g0340661 RchiOBHm_Chr1g0340691
rosa_laevigata	RLG00000029013 RLG00000029018 RLG00000029020 RLG00000029024 RLG00000029026 RLG00000029029 RLG00000029030 RLG00000029032 RLG00000029033
rosa_multiflora	Rmu_sc0000566.1_g000026 Rmu_sc0000566.1_g000034 Rmu_sc0000566.1_g000054 Rmu_sc0001836.1_g000016 Rmu_sc0001836.1_g000022 Rmu_sc0001836.1_g000023 Rmu_sc0001836.1_g000028 Rmu_sc0001836.1_g000058 Rmu_sc0001946.1_g000004 Rmu_sc0002595.1_g000001 Rmu_sc0002595.1_g000005 Rmu_sc0005167.1_g000003 Rmu_sc0005167.1_g000009 Rmu_sc0005167.1_g000018 Rmu_sc0024761.1_g000004
rosa_roxburghii	Rroxscaffold_4G00311170 Rroxscaffold_4G00311190 Rroxscaffold_4G00311250 Rroxscaffold_4G00315930 Rroxscaffold_4G00315960 Rroxscaffold_5G00353270
rosa_rugosa	Rorug01G0162000.1 Rorug01G0162500.1 Rorug01G0162800.1 Rorug01G0163000.1 Rorug01G0163400.1 Rorug01G0163700.1 Rorug01G0164100.1 Rorug01G0164300 Rorug05G0484800
rosa_samantha	Rh1AG177800 Rh1AG178000 Rh1AG178300 Rh1AG178600 Rh1AG178900 Rh1BG145300 Rh1BG145600 Rh1BG145800 Rh1BG145900 Rh1BG146000 Rh1BG146700 Rh1CG165100 Rh1CG165200 Rh1CG165400 Rh1CG165600 Rh1CG165700 Rh1CG165900 Rh1DG177500 Rh1DG177600 Rh1DG177800 Rh1DG177900 Rh1DG178000 Rh1DG178800
rosa_wichuraiana	Rw0G006210 Rw1G014800 Rw1G014890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	129, 380, 593, 740
AccI	GTMKAC	1 cut(s)	1274
AccII	CGCG	5 cut(s)	153, 261, 300, 577, 582
AclWI	GGATC	1 cut(s)	384
AcsI	RAATTY	2 cut(s)	374, 1162
AcyI	GRCGYC	3 cut(s)	130, 381, 741
AdeI	CACNNNGTG	1 cut(s)	499
AfaI	GTAC	1 cut(s)	918
AfiI	CCNNNNNNNGG	3 cut(s)	377, 521, 1399
AgsI	TTSAA	3 cut(s)	406, 773, 937
AjnI	CCWGG	3 cut(s)	495, 1016, 1379
AluBI	AGCT	6 cut(s)	691, 806, 852, 1322, 1387, 1450
AluI	AGCT	6 cut(s)	691, 806, 852, 1322, 1387, 1450
Alw21I	GWGCWC	2 cut(s)	504, 854
Alw26I	GTCTC	2 cut(s)	479, 1034
AlwI	GGATC	1 cut(s)	384
AoxI	GGCC	1 cut(s)	105
ApeKI	GCWGC	2 cut(s)	4, 318
ApoI	RAATTY	2 cut(s)	374, 1162
ArsI	GACNNNNNNTTYG	2 cut(s)	1229, 1261
Asp700I	GAANNNNTTC	1 cut(s)	1431
AspLEI	GCGC	6 cut(s)	132, 263, 302, 383, 582, 743
AspS9I	GGNCC	2 cut(s)	106, 399
AsuC2I	CCSGG	1 cut(s)	210
AsuHPI	GGTGA	9 cut(s)	46, 139, 260, 355, 553, 623, 812, 883, 1421
AsuII	TTCGAA	1 cut(s)	1248
AvaII	GGWCC	1 cut(s)	399
BaeGI	GKGCMC	2 cut(s)	534, 974
BanI	GGYRCC	4 cut(s)	129, 380, 593, 740
BanII	GRGCYC	3 cut(s)	159, 854, 1302
BauI	CACGAG	1 cut(s)	437
Bbv12I	GWGCWC	2 cut(s)	504, 854
BbvI	GCAGC	1 cut(s)	330
BccI	CCATC	5 cut(s)	242, 584, 658, 662, 715
BceAI	ACGGC	3 cut(s)	44, 368, 947
BciT130I	CCWGG	3 cut(s)	497, 1018, 1381
BclI	TGATCA	2 cut(s)	1030, 1185
BcnI	CCSGG	1 cut(s)	210
BcoDI	GTCTC	2 cut(s)	479, 1034
BfmI	CTRYAG	1 cut(s)	1332
BfoI	RGCGCY	3 cut(s)	133, 384, 744
BisI	GCNGC	5 cut(s)	5, 98, 244, 319, 578
BlsI	GCNGC	5 cut(s)	6, 99, 245, 320, 579
Bme1390I	CCNGG	4 cut(s)	210, 497, 1018, 1381
Bme18I	GGWCC	1 cut(s)	399
BmgT120I	GGNCC	2 cut(s)	106, 399
BmiI	GGNNCC	5 cut(s)	17, 131, 382, 595, 742
BmrFI	CCNGG	4 cut(s)	210, 497, 1018, 1381
BmsI	GCATC	2 cut(s)	305, 898
BplI	GAGNNNNNCTC	2 cut(s)	1036, 1068
BpmI	CTGGAG	1 cut(s)	1038
Bpu14I	TTCGAA	1 cut(s)	1248
BpuMI	CCSGG	1 cut(s)	210
BsaHI	GRCGYC	3 cut(s)	130, 381, 741
BsaJI	CCNNGG	4 cut(s)	125, 208, 519, 1380
BsaXI	ACNNNNNCTCC	8 cut(s)	76, 106, 179, 209, 779, 809, 824, 854
Bsc4I	CCNNNNNNNGG	3 cut(s)	377, 521, 1399
Bse1I	ACTGG	2 cut(s)	108, 989
Bse3DI	GCAATG	1 cut(s)	1356
BseBI	CCWGG	3 cut(s)	497, 1018, 1381
BseDI	CCNNGG	4 cut(s)	125, 208, 519, 1380
BseGI	GGATG	6 cut(s)	237, 595, 673, 721, 913, 1138
BseLI	CCNNNNNNNGG	3 cut(s)	377, 521, 1399
BseMI	GCAATG	1 cut(s)	1356
BseMII	CTCAG	1 cut(s)	1323
BseNI	ACTGG	2 cut(s)	108, 989
BseRI	GAGGAG	3 cut(s)	32, 107, 275
BseSI	GKGCMC	2 cut(s)	534, 974
BseXI	GCAGC	1 cut(s)	330
BsgI	GTGCAG	1 cut(s)	474
Bsh1236I	CGCG	5 cut(s)	153, 261, 300, 577, 582
BshFI	GGCC	1 cut(s)	107
BshNI	GGYRCC	4 cut(s)	129, 380, 593, 740
BsiHKAI	GWGCWC	2 cut(s)	504, 854
BsiSI	CCGG	3 cut(s)	13, 210, 953
BslFI	GGGAC	1 cut(s)	47
BslI	CCNNNNNNNGG	3 cut(s)	377, 521, 1399
BsmAI	GTCTC	2 cut(s)	479, 1034
BsmBI	CGTCTC	1 cut(s)	1034
BsmFI	GGGAC	1 cut(s)	47
BsmI	GAATGC	2 cut(s)	412, 1462
BsnI	GGCC	1 cut(s)	107
Bsp119I	TTCGAA	1 cut(s)	1248
Bsp1286I	GDGCHC	6 cut(s)	159, 504, 534, 854, 974, 1302
Bsp143I	GATC	3 cut(s)	389, 1030, 1185
Bsp19I	CCATGG	1 cut(s)	519
BspANI	GGCC	1 cut(s)	107
BspCNI	CTCAG	1 cut(s)	1322
BspFNI	CGCG	5 cut(s)	153, 261, 300, 577, 582
BspHI	TCATGA	1 cut(s)	1062
BspLI	GGNNCC	5 cut(s)	17, 131, 382, 595, 742
BspPI	GGATC	1 cut(s)	384
BspT104I	TTCGAA	1 cut(s)	1248
BspT107I	GGYRCC	4 cut(s)	129, 380, 593, 740
BsrDI	GCAATG	1 cut(s)	1356
BsrI	ACTGG	2 cut(s)	108, 989
BssECI	CCNNGG	4 cut(s)	125, 208, 519, 1380
BssMI	GATC	3 cut(s)	389, 1030, 1185
BssNI	GRCGYC	3 cut(s)	130, 381, 741
BssSI	CACGAG	1 cut(s)	437
BssT1I	CCWWGG	2 cut(s)	125, 519
Bst2BI	CACGAG	1 cut(s)	437
Bst2UI	CCWGG	3 cut(s)	497, 1018, 1381
Bst4CI	ACNGT	4 cut(s)	465, 921, 1336, 1373
Bst6I	CTCTTC	3 cut(s)	335, 830, 920
BstACI	GRCGYC	3 cut(s)	130, 381, 741
BstBI	TTCGAA	1 cut(s)	1248
BstC8I	GCNNGC	3 cut(s)	155, 516, 950
BstDEI	CTNAG	1 cut(s)	1309
BstDSI	CCRYGG	1 cut(s)	519
BstENI	CCTNNNNNAGG	1 cut(s)	1397
BstF5I	GGATG	6 cut(s)	237, 595, 673, 721, 913, 1138
BstFNI	CGCG	5 cut(s)	153, 261, 300, 577, 582
BstH2I	RGCGCY	3 cut(s)	133, 384, 744
BstHHI	GCGC	6 cut(s)	132, 263, 302, 383, 582, 743
BstKTI	GATC	3 cut(s)	392, 1033, 1188
BstMAI	GTCTC	2 cut(s)	479, 1034
BstMBI	GATC	3 cut(s)	389, 1030, 1185
BstMWI	GCNNNNNNNGC	2 cut(s)	252, 688
BstNI	CCWGG	3 cut(s)	497, 1018, 1381
BstSCI	CCNGG	4 cut(s)	208, 495, 1016, 1379
BstSFI	CTRYAG	1 cut(s)	1332
BstSLI	GKGCMC	2 cut(s)	534, 974
BstUI	CGCG	5 cut(s)	153, 261, 300, 577, 582
BstV1I	GCAGC	1 cut(s)	330
BstXI	CCANNNNNNTGG	1 cut(s)	664
BsuRI	GGCC	1 cut(s)	107
BtgI	CCRYGG	1 cut(s)	519
BtgZI	GCGATG	1 cut(s)	336
BtsCI	GGATG	6 cut(s)	237, 595, 673, 721, 913, 1138
BtsIMutI	CAGTG	3 cut(s)	101, 461, 1378
Cac8I	GCNNGC	3 cut(s)	155, 516, 950
CciI	TCATGA	1 cut(s)	1062
CfoI	GCGC	6 cut(s)	132, 263, 302, 383, 582, 743
Cfr13I	GGNCC	2 cut(s)	106, 399
CseI	GACGC	1 cut(s)	865
CsiI	ACCWGGT	1 cut(s)	495
Csp6I	GTAC	1 cut(s)	917
CviAII	CATG	4 cut(s)	520, 712, 1063, 1138
CviQI	GTAC	1 cut(s)	917
DdeI	CTNAG	1 cut(s)	1309
DinI	GGCGCC	3 cut(s)	131, 382, 742
DpnI	GATC	3 cut(s)	391, 1032, 1187
DpnII	GATC	3 cut(s)	389, 1030, 1185
DraIII	CACNNNGTG	1 cut(s)	499
Eam1104I	CTCTTC	3 cut(s)	335, 830, 920
EarI	CTCTTC	3 cut(s)	335, 830, 920
EciI	GGCGGA	3 cut(s)	84, 230, 845
Ecl136II	GAGCTC	1 cut(s)	852
Eco130I	CCWWGG	2 cut(s)	125, 519
Eco24I	GRGCYC	3 cut(s)	159, 854, 1302
Eco47I	GGWCC	1 cut(s)	399
Eco53kI	GAGCTC	1 cut(s)	852
EcoICRI	GAGCTC	1 cut(s)	852
EcoNI	CCTNNNNNAGG	1 cut(s)	1397
EcoO109I	RGGNCCY	1 cut(s)	399
EcoRI	GAATTC	1 cut(s)	1162
EcoRII	CCWGG	3 cut(s)	495, 1016, 1379
EcoT14I	CCWWGG	2 cut(s)	125, 519
EcoT38I	GRGCYC	3 cut(s)	159, 854, 1302
EgeI	GGCGCC	3 cut(s)	131, 382, 742
EheI	GGCGCC	3 cut(s)	131, 382, 742
ErhI	CCWWGG	2 cut(s)	125, 519
Esp3I	CGTCTC	1 cut(s)	1034
FaeI	CATG	4 cut(s)	523, 715, 1066, 1141
FaqI	GGGAC	1 cut(s)	47
FatI	CATG	4 cut(s)	519, 711, 1062, 1137
FauI	CCCGC	3 cut(s)	158, 266, 1111
FbaI	TGATCA	2 cut(s)	1030, 1185
FblI	GTMKAC	1 cut(s)	1274
Fnu4HI	GCNGC	5 cut(s)	5, 98, 244, 319, 578
FokI	GGATG	6 cut(s)	224, 602, 680, 728, 920, 1145
FriOI	GRGCYC	3 cut(s)	159, 854, 1302
Fsp4HI	GCNGC	5 cut(s)	5, 98, 244, 319, 578
GlaI	GCGC	6 cut(s)	131, 262, 301, 382, 581, 742
GluI	GCNGC	5 cut(s)	5, 98, 244, 319, 578
GsuI	CTGGAG	1 cut(s)	1038
HaeII	RGCGCY	3 cut(s)	133, 384, 744
HaeIII	GGCC	1 cut(s)	107
HapII	CCGG	3 cut(s)	13, 210, 953
HgaI	GACGC	1 cut(s)	865
HhaI	GCGC	6 cut(s)	132, 263, 302, 383, 582, 743
Hin1I	GRCGYC	3 cut(s)	130, 381, 741
Hin1II	CATG	4 cut(s)	523, 715, 1066, 1141
Hin6I	GCGC	6 cut(s)	130, 261, 300, 381, 580, 741
HinP1I	GCGC	6 cut(s)	130, 261, 300, 381, 580, 741
HinfI	GANTC	6 cut(s)	213, 433, 1194, 1307, 1376, 1418
HpaII	CCGG	3 cut(s)	13, 210, 953
HphI	GGTGA	9 cut(s)	46, 139, 260, 355, 553, 623, 812, 883, 1421
Hpy166II	GTNNAC	4 cut(s)	455, 917, 1275, 1361
Hpy188I	TCNGA	5 cut(s)	292, 314, 372, 432, 1161
Hpy188III	TCNNGA	6 cut(s)	437, 638, 1055, 1063, 1086, 1311
Hpy8I	GTNNAC	4 cut(s)	455, 917, 1275, 1361
Hpy99I	CGWCG	1 cut(s)	859
HpyAV	CCTTC	7 cut(s)	43, 76, 260, 887, 892, 991, 1210
HpyCH4III	ACNGT	4 cut(s)	465, 921, 1336, 1373
HpyCH4IV	ACGT	1 cut(s)	1074
HpyCH4V	TGCA	3 cut(s)	318, 491, 948
HpyF10VI	GCNNNNNNNGC	2 cut(s)	252, 688
HpyF3I	CTNAG	1 cut(s)	1309
HpySE526I	ACGT	1 cut(s)	1074
Hsp92I	GRCGYC	3 cut(s)	130, 381, 741
Hsp92II	CATG	4 cut(s)	523, 715, 1066, 1141
HspAI	GCGC	6 cut(s)	130, 261, 300, 381, 580, 741
KasI	GGCGCC	3 cut(s)	129, 380, 740
Ksp22I	TGATCA	2 cut(s)	1030, 1185
Kzo9I	GATC	3 cut(s)	389, 1030, 1185
LmnI	GCTCC	2 cut(s)	260, 1384
Lsp1109I	GCAGC	1 cut(s)	330
LweI	GCATC	2 cut(s)	305, 898
MabI	ACCWGGT	1 cut(s)	495
MaeII	ACGT	1 cut(s)	1074
MaeIII	GTNAC	4 cut(s)	541, 643, 751, 1304
MalI	GATC	3 cut(s)	391, 1032, 1187
MboI	GATC	3 cut(s)	389, 1030, 1185
MboII	GAAGA	8 cut(s)	175, 322, 737, 802, 847, 937, 949, 952
MhlI	GDGCHC	6 cut(s)	159, 504, 534, 854, 974, 1302
MluCI	AATT	5 cut(s)	374, 811, 943, 1022, 1162
Mly113I	GGCGCC	3 cut(s)	130, 381, 741
MlyI	GAGTC	1 cut(s)	1301
MmeI	TCCRAC	1 cut(s)	315
MroXI	GAANNNNTTC	1 cut(s)	1431
MseI	TTAA	3 cut(s)	705, 810, 819
MslI	CAYNNNNRTG	1 cut(s)	662
MspA1I	CMGCKG	1 cut(s)	1450
MspI	CCGG	3 cut(s)	13, 210, 953
MspR9I	CCNGG	4 cut(s)	210, 497, 1018, 1381
Mva1269I	GAATGC	2 cut(s)	412, 1462
MvaI	CCWGG	3 cut(s)	497, 1018, 1381
MvnI	CGCG	5 cut(s)	153, 261, 300, 577, 582
MwoI	GCNNNNNNNGC	2 cut(s)	252, 688
NarI	GGCGCC	3 cut(s)	130, 381, 741
NciI	CCSGG	1 cut(s)	210
NcoI	CCATGG	1 cut(s)	519
NdeII	GATC	3 cut(s)	389, 1030, 1185
NlaIII	CATG	4 cut(s)	523, 715, 1066, 1141
NlaIV	GGNNCC	5 cut(s)	17, 131, 382, 595, 742
NmuCI	GTSAC	3 cut(s)	541, 643, 1304
NspV	TTCGAA	1 cut(s)	1248
PagI	TCATGA	1 cut(s)	1062
PcsI	WCGNNNNNNNCGW	1 cut(s)	1245
PctI	GAATGC	2 cut(s)	412, 1462
PdmI	GAANNNNTTC	1 cut(s)	1431
PfeI	GAWTC	5 cut(s)	213, 433, 1194, 1376, 1418
PkrI	GCNGC	5 cut(s)	6, 99, 245, 320, 579
PleI	GAGTC	1 cut(s)	1301
PluTI	GGCGCC	3 cut(s)	133, 384, 744
PpsI	GAGTC	1 cut(s)	1301
PpuMI	RGGWCCY	1 cut(s)	399
Psp124BI	GAGCTC	1 cut(s)	854
Psp5II	RGGWCCY	1 cut(s)	399
Psp6I	CCWGG	3 cut(s)	495, 1016, 1379
PspGI	CCWGG	3 cut(s)	495, 1016, 1379
PspN4I	GGNNCC	5 cut(s)	17, 131, 382, 595, 742
PspPI	GGNCC	2 cut(s)	106, 399
PspPPI	RGGWCCY	1 cut(s)	399
PvuII	CAGCTG	1 cut(s)	1450
RsaI	GTAC	1 cut(s)	918
RsaNI	GTAC	1 cut(s)	917
RseI	CAYNNNNRTG	1 cut(s)	662
SacI	GAGCTC	1 cut(s)	854
SaqAI	TTAA	3 cut(s)	705, 810, 819
SatI	GCNGC	5 cut(s)	5, 98, 244, 319, 578
Sau3AI	GATC	3 cut(s)	389, 1030, 1185
Sau96I	GGNCC	2 cut(s)	106, 399
SchI	GAGTC	1 cut(s)	1301
ScrFI	CCNGG	4 cut(s)	210, 497, 1018, 1381
SduI	GDGCHC	6 cut(s)	159, 504, 534, 854, 974, 1302
SexAI	ACCWGGT	1 cut(s)	495
SfaNI	GCATC	2 cut(s)	305, 898
SfcI	CTRYAG	1 cut(s)	1332
SfoI	GGCGCC	3 cut(s)	131, 382, 742
SfuI	TTCGAA	1 cut(s)	1248
SinI	GGWCC	1 cut(s)	399
SmiMI	CAYNNNNRTG	1 cut(s)	662
Sse9I	AATT	5 cut(s)	374, 811, 943, 1022, 1162
SspDI	GGCGCC	3 cut(s)	129, 380, 740
SstI	GAGCTC	1 cut(s)	854
StyD4I	CCNGG	4 cut(s)	208, 495, 1016, 1379
StyI	CCWWGG	2 cut(s)	125, 519
TaaI	ACNGT	4 cut(s)	465, 921, 1336, 1373
TaiI	ACGT	1 cut(s)	1077
TaqI	TCGA	5 cut(s)	165, 276, 504, 854, 1248
TasI	AATT	5 cut(s)	374, 811, 943, 1022, 1162
TatI	WGTACW	1 cut(s)	916
TauI	GCSGC	3 cut(s)	100, 246, 580
TfiI	GAWTC	5 cut(s)	213, 433, 1194, 1376, 1418
Tru1I	TTAA	3 cut(s)	705, 810, 819
Tru9I	TTAA	3 cut(s)	705, 810, 819
TscAI	CASTG	3 cut(s)	108, 468, 1378
TseFI	GTSAC	3 cut(s)	541, 643, 1304
TseI	GCWGC	2 cut(s)	4, 318
Tsp45I	GTSAC	3 cut(s)	541, 643, 1304
TspDTI	ATGAA	2 cut(s)	322, 522
TspGWI	ACGGA	1 cut(s)	382
TspRI	CASTG	3 cut(s)	108, 468, 1378
VpaK11BI	GGWCC	1 cut(s)	399
XagI	CCTNNNNNAGG	1 cut(s)	1397
XapI	RAATTY	2 cut(s)	374, 1162
XmiI	GTMKAC	1 cut(s)	1274
XmnI	GAANNNNTTC	1 cut(s)	1431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.