Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0000530

Physical Location & Seq

Genomic Coordinates Reverse (-)

31639831 .. 31641372

Gene Structure 1542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029024

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGCTGCTACGCCGGAACCTCTCCCCCAAACCCTTCTCTCTCCTCCGCCCAATCACCGCCGTCCCCTTCTCCACCTTCACCTCCGCCGTCGATTTCCTCCACTCCTACACCGTCACCCCTCCAATCCAAGACTGGCCCCACCACCTCCACCCAAAGCGCCTCATCTCCCTCATCACCCGCGAGCCCAAACTCGACCTCGCCCTCCAAATCTTCCACCACGCCTCCAAATACCACCCCGGATTCCACCATAATTACCACACCTACCACGCCATCATCCGCCGCCTCCTCCGCTCCCGCGCTTTTCACCACATCGATCCCCTCCTCTCCGACCTCCGCACCTCCAATCTCCGATGCGGCGAGGACCTCTTCATCTCCCTAATCCGCAACTACGGCGTCGTTTCACGCCCCAAACTCGCATTCAAGACATTTCTTACCATTCCTAAATTCGGCGTACAACGCTCTGTGAGGTCCTTGAATGCTTTGCTGAACGCTTTGGTTCAGAATCACGAGTATAGATTGGTTCACTCGGTGTTTCGGAACTGCAGGGAGAGGTTCGGGGTGGCGCCGAATGTGTTTAGTTGTAATATATTGATCAAAGCACTGTGTAAGAGAAATGATTTGGAGACTGCACACCAGGTGCTCGATGAAATGCCTGCGATGGGATTTGTGCCCAATGTGGTGACTTTTACTACCATTTTGGGCGGTTATGTGTCGCGGCGCGATATGGTTGGTGCCAACAGGGTGTTTGGTGAGATTTTGGACAGAGGGTGGTTTCCTGATGTGACTACATATACTATATTGATGGATGGATATGTGAAGCAGGGGAAGCTGGTTGAGGCTATTAAGGTTATGGATGAGATGGAGGATAATGGGGTTGGCGCCAATGAGGTTACTTATGGGGTTATGATTGAAGCTTATTGTAAGGAAAAGAAGTCGGGCGAAGCGGTTAATTTGCTTAATGATATGTTGGAGAAGAGGTATATACCGAGCTCGGCGCTCTGTTGTAAGGTGATTGATGTTTTGTGTTGCGAAGGGAAGGTAGAGGATGCTTGTGAACTGTGGAAGAGGCTTTTGAAGAAGAATTGCACGCCGGATAATGCGGTATTGGGCACGCTCATACACTGGCTTTGTAAGAAGGGAGAATTGTGGGAAGCCAGGAGTTTGTTTGATCAGTTTGAGACGAGTGAGCCTCCAGATGTCATGACTTACAACGTGCTTATTTCTGGAATGTGTGAAGTGGGGGAGTTGTGTGAGGCAGGGAGGTTGTGGGATGACATGGTGGAGAAAGGTTATTCTCCGAATTCTTTTACATATAATGTATTGATCAAAGGATTCTGTAAGATTGGAAAAGCGAAGGAGGGAATTAGGATTTTGGATGAGATGTTCGAAAAAGGCTGTTTGCCAAACAAGTCTACTTATGCTATGCTGAAATCACTAGAGTTATATCTATGGCAATGTCAAGTGGAGACATTGACAGTGAATCCTGGGATCTTTTCCTTACTAAGGTTGTTGGTGATGTGGATTCTGGGGAAAGTGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

514

Amino Acids

58.6

Weight (kDa)

8.63

Isoelectric Point (pI)

37.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	177 - 238	8.5e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	186 - 217	2.8e-08	PPR repeat
PPR_2	PF13041	189 - 236	1.2e-14	PPR repeat family
PPR_2	PF13041	224 - 273	4.1e-13	PPR repeat family
PPR_3	PF13812	248 - 308	5.8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	256 - 288	5e-09	PPR repeat
PPR_2	PF13041	259 - 306	1.6e-14	PPR repeat family
PPR	PF01535	263 - 292	2.8e-08	PPR repeat
PPR_1	PF12854	291 - 322	7.8e-06	PPR repeat
PPR_2	PF13041	295 - 331	3.4e-07	PPR repeat family
PPR	PF01535	297 - 326	3.4e-06	PPR repeat
PPR_2	PF13041	336 - 378	4.6e-07	PPR repeat family
PPR_1	PF12854	360 - 391	9.4e-06	PPR repeat
PPR_1	PF12854	398 - 427	9e-08	PPR repeat
PPR_2	PF13041	398 - 447	2.6e-19	PPR repeat family
PPR_3	PF13812	398 - 445	8.5e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	421 - 476	5.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	429 - 461	1.4e-10	PPR repeat
PPR	PF01535	436 - 466	7.6e-08	PPR repeat
PPR_2	PF13041	437 - 476	1.3e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16420 AT5G16420 AT5G16420 AT5G16420
fragaria_vesca	FvH4_7g08341 FvH4_7g08360
malus_domestica	MD02G1232100.v1.1 MD07G1081300.v1.1
prunus_persica	Prupe.2G106500_v2.0.a1
pyrus_communis	pycom02g20040
rosa_chinensis	RchiOBHm_Chr1g0340331 RchiOBHm_Chr1g0340431 RchiOBHm_Chr1g0340441 RchiOBHm_Chr1g0340491 RchiOBHm_Chr1g0340531 RchiOBHm_Chr1g0340541 RchiOBHm_Chr1g0340561 RchiOBHm_Chr1g0340621 RchiOBHm_Chr1g0340661 RchiOBHm_Chr1g0340691
rosa_laevigata	RLG00000029013 RLG00000029018 RLG00000029020 RLG00000029024 RLG00000029026 RLG00000029029 RLG00000029030 RLG00000029032 RLG00000029033
rosa_multiflora	Rmu_sc0000566.1_g000026 Rmu_sc0000566.1_g000034 Rmu_sc0000566.1_g000054 Rmu_sc0001836.1_g000016 Rmu_sc0001836.1_g000022 Rmu_sc0001836.1_g000023 Rmu_sc0001836.1_g000028 Rmu_sc0001836.1_g000058 Rmu_sc0001946.1_g000004 Rmu_sc0002595.1_g000001 Rmu_sc0002595.1_g000005 Rmu_sc0005167.1_g000003 Rmu_sc0005167.1_g000009 Rmu_sc0005167.1_g000018 Rmu_sc0024761.1_g000004
rosa_roxburghii	Rroxscaffold_4G00311170 Rroxscaffold_4G00311190 Rroxscaffold_4G00311250 Rroxscaffold_4G00315930 Rroxscaffold_4G00315960 Rroxscaffold_5G00353270
rosa_rugosa	Rorug01G0162000.1 Rorug01G0162500.1 Rorug01G0162800.1 Rorug01G0163000.1 Rorug01G0163400.1 Rorug01G0163700.1 Rorug01G0164100.1 Rorug01G0164300 Rorug05G0484800
rosa_samantha	Rh1AG177800 Rh1AG178000 Rh1AG178300 Rh1AG178600 Rh1AG178900 Rh1BG145300 Rh1BG145600 Rh1BG145800 Rh1BG145900 Rh1BG146000 Rh1BG146700 Rh1CG165100 Rh1CG165200 Rh1CG165400 Rh1CG165600 Rh1CG165700 Rh1CG165900 Rh1DG177500 Rh1DG177600 Rh1DG177800 Rh1DG177900 Rh1DG178000 Rh1DG178800
rosa_wichuraiana	Rw0G006210 Rw1G014800 Rw1G014890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	562, 731, 878
AccBSI	CCGCTC	1 cut(s)	291
AccI	GTMKAC	1 cut(s)	1412
AccII	CGCG	4 cut(s)	180, 297, 715, 720
AclWI	GGATC	2 cut(s)	308, 1496
AcsI	RAATTY	2 cut(s)	443, 1300
AcyI	GRCGYC	3 cut(s)	393, 563, 879
AdeI	CACNNNGTG	2 cut(s)	529, 637
AfaI	GTAC	1 cut(s)	453
AfiI	CCNNNNNNNGG	3 cut(s)	446, 659, 1503
AgsI	TTSAA	4 cut(s)	421, 475, 911, 1075
AjnI	CCWGG	3 cut(s)	633, 1154, 1483
AjuI	GAANNNNNNNTTGG	2 cut(s)	401, 433
AloI	GAACNNNNNNTCC	2 cut(s)	1367, 1399
AluBI	AGCT	3 cut(s)	829, 914, 990
AluI	AGCT	3 cut(s)	829, 914, 990
Alw21I	GWGCWC	2 cut(s)	642, 992
Alw26I	GTCTC	3 cut(s)	617, 1172, 1460
AlwI	GGATC	2 cut(s)	308, 1496
AoxI	GGCC	1 cut(s)	134
ApeKI	GCWGC	1 cut(s)	4
ApoI	RAATTY	2 cut(s)	443, 1300
Asp700I	GAANNNNTTC	1 cut(s)	1535
AspLEI	GCGC	6 cut(s)	159, 299, 565, 720, 881, 997
AspS9I	GGNCC	3 cut(s)	135, 361, 468
AsuC2I	CCSGG	1 cut(s)	237
AsuHPI	GGTGA	9 cut(s)	46, 70, 106, 166, 296, 691, 761, 1021, 1525
AsuII	TTCGAA	1 cut(s)	1386
AvaII	GGWCC	2 cut(s)	361, 468
BaeGI	GKGCMC	2 cut(s)	672, 1112
BanI	GGYRCC	3 cut(s)	562, 731, 878
BanII	GRGCYC	2 cut(s)	186, 992
BauI	CACGAG	1 cut(s)	506
Bbv12I	GWGCWC	2 cut(s)	642, 992
BccI	CCATC	5 cut(s)	278, 652, 796, 800, 853
BceAI	ACGGC	3 cut(s)	44, 71, 406
BciT130I	CCWGG	3 cut(s)	635, 1156, 1485
BclI	TGATCA	3 cut(s)	591, 1168, 1323
BcnI	CCSGG	1 cut(s)	237
BcoDI	GTCTC	3 cut(s)	617, 1172, 1460
BfaI	CTAG	1 cut(s)	1436
BfmI	CTRYAG	1 cut(s)	541
BfoI	RGCGCY	4 cut(s)	160, 566, 882, 998
BisI	GCNGC	4 cut(s)	5, 280, 355, 716
BlsI	GCNGC	4 cut(s)	6, 281, 356, 717
Bme1390I	CCNGG	4 cut(s)	237, 635, 1156, 1485
Bme18I	GGWCC	2 cut(s)	361, 468
BmgT120I	GGNCC	3 cut(s)	135, 361, 468
BmiI	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
BmrFI	CCNGG	4 cut(s)	237, 635, 1156, 1485
BmsI	GCATC	2 cut(s)	341, 1036
BplI	GAGNNNNNCTC	2 cut(s)	1174, 1206
BpmI	CTGGAG	1 cut(s)	1176
Bpu14I	TTCGAA	1 cut(s)	1386
BpuMI	CCSGG	1 cut(s)	237
Bsa29I	ATCGAT	1 cut(s)	312
BsaHI	GRCGYC	3 cut(s)	393, 563, 879
BsaJI	CCNNGG	2 cut(s)	235, 1484
BsaXI	ACNNNNNCTCC	4 cut(s)	206, 236, 962, 992
Bsc4I	CCNNNNNNNGG	3 cut(s)	446, 659, 1503
Bse1I	ACTGG	2 cut(s)	137, 1127
Bse3DI	GCAATG	1 cut(s)	1460
BseBI	CCWGG	3 cut(s)	635, 1156, 1485
BseCI	ATCGAT	1 cut(s)	312
BseDI	CCNNGG	2 cut(s)	235, 1484
BseGI	GGATG	6 cut(s)	273, 811, 859, 1051, 1276, 1381
BseLI	CCNNNNNNNGG	3 cut(s)	446, 659, 1503
BseMI	GCAATG	1 cut(s)	1460
BseNI	ACTGG	2 cut(s)	137, 1127
BseRI	GAGGAG	3 cut(s)	32, 275, 311
BseSI	GKGCMC	2 cut(s)	672, 1112
BsgI	GTGCAG	1 cut(s)	612
Bsh1236I	CGCG	4 cut(s)	180, 297, 715, 720
BshFI	GGCC	1 cut(s)	136
BshNI	GGYRCC	3 cut(s)	562, 731, 878
BshVI	ATCGAT	1 cut(s)	312
BsiHKAI	GWGCWC	2 cut(s)	642, 992
BsiSI	CCGG	3 cut(s)	13, 237, 1091
BslFI	GGGAC	1 cut(s)	47
BslI	CCNNNNNNNGG	3 cut(s)	446, 659, 1503
BsmAI	GTCTC	3 cut(s)	617, 1172, 1460
BsmBI	CGTCTC	1 cut(s)	1172
BsmFI	GGGAC	1 cut(s)	47
BsmI	GAATGC	2 cut(s)	416, 481
BsnI	GGCC	1 cut(s)	136
Bsp119I	TTCGAA	1 cut(s)	1386
Bsp1286I	GDGCHC	5 cut(s)	186, 642, 672, 992, 1112
Bsp143I	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
BspANI	GGCC	1 cut(s)	136
BspDI	ATCGAT	1 cut(s)	312
BspFNI	CGCG	4 cut(s)	180, 297, 715, 720
BspHI	TCATGA	1 cut(s)	1200
BspLI	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
BspMAI	CTGCAG	1 cut(s)	545
BspPI	GGATC	2 cut(s)	308, 1496
BspT104I	TTCGAA	1 cut(s)	1386
BspT107I	GGYRCC	3 cut(s)	562, 731, 878
BsrBI	CCGCTC	1 cut(s)	291
BsrDI	GCAATG	1 cut(s)	1460
BsrI	ACTGG	2 cut(s)	137, 1127
BssECI	CCNNGG	2 cut(s)	235, 1484
BssMI	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
BssNI	GRCGYC	3 cut(s)	393, 563, 879
BssSI	CACGAG	1 cut(s)	506
Bst2BI	CACGAG	1 cut(s)	506
Bst2UI	CCWGG	3 cut(s)	635, 1156, 1485
Bst4CI	ACNGT	4 cut(s)	112, 603, 1059, 1477
Bst6I	CTCTTC	3 cut(s)	371, 968, 1058
BstACI	GRCGYC	3 cut(s)	393, 563, 879
BstBI	TTCGAA	1 cut(s)	1386
BstC8I	GCNNGC	4 cut(s)	182, 654, 1088, 1112
BstDEI	CTNAG	1 cut(s)	1502
BstENI	CCTNNNNNAGG	1 cut(s)	1501
BstF5I	GGATG	6 cut(s)	273, 811, 859, 1051, 1276, 1381
BstFNI	CGCG	4 cut(s)	180, 297, 715, 720
BstH2I	RGCGCY	4 cut(s)	160, 566, 882, 998
BstHHI	GCGC	6 cut(s)	159, 299, 565, 720, 881, 997
BstKTI	GATC	5 cut(s)	316, 594, 1171, 1326, 1491
BstMAI	GTCTC	3 cut(s)	617, 1172, 1460
BstMBI	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
BstMWI	GCNNNNNNNGC	4 cut(s)	288, 390, 456, 826
BstNI	CCWGG	3 cut(s)	635, 1156, 1485
BstSCI	CCNGG	4 cut(s)	235, 633, 1154, 1483
BstSFI	CTRYAG	1 cut(s)	541
BstSLI	GKGCMC	2 cut(s)	672, 1112
BstUI	CGCG	4 cut(s)	180, 297, 715, 720
BstX2I	RGATCY	1 cut(s)	1488
BstYI	RGATCY	1 cut(s)	1488
Bsu15I	ATCGAT	1 cut(s)	312
BsuRI	GGCC	1 cut(s)	136
BsuTUI	ATCGAT	1 cut(s)	312
BtgZI	GCGATG	1 cut(s)	671
BtsCI	GGATG	6 cut(s)	273, 811, 859, 1051, 1276, 1381
BtsIMutI	CAGTG	3 cut(s)	599, 1120, 1482
Cac8I	GCNNGC	4 cut(s)	182, 654, 1088, 1112
CciI	TCATGA	1 cut(s)	1200
CfoI	GCGC	6 cut(s)	159, 299, 565, 720, 881, 997
Cfr13I	GGNCC	3 cut(s)	135, 361, 468
ClaI	ATCGAT	1 cut(s)	312
CseI	GACGC	1 cut(s)	382
CsiI	ACCWGGT	1 cut(s)	633
Csp6I	GTAC	1 cut(s)	452
CviAII	CATG	2 cut(s)	1201, 1276
CviQI	GTAC	1 cut(s)	452
DdeI	CTNAG	1 cut(s)	1502
DinI	GGCGCC	2 cut(s)	564, 880
DpnI	GATC	5 cut(s)	315, 593, 1170, 1325, 1490
DpnII	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
DraIII	CACNNNGTG	2 cut(s)	529, 637
Eam1104I	CTCTTC	3 cut(s)	371, 968, 1058
EarI	CTCTTC	3 cut(s)	371, 968, 1058
EciI	GGCGGA	3 cut(s)	35, 73, 266
Ecl136II	GAGCTC	1 cut(s)	990
Eco24I	GRGCYC	2 cut(s)	186, 992
Eco47I	GGWCC	2 cut(s)	361, 468
Eco53kI	GAGCTC	1 cut(s)	990
EcoICRI	GAGCTC	1 cut(s)	990
EcoNI	CCTNNNNNAGG	1 cut(s)	1501
EcoO109I	RGGNCCY	2 cut(s)	361, 468
EcoRI	GAATTC	1 cut(s)	1300
EcoRII	CCWGG	3 cut(s)	633, 1154, 1483
EcoT38I	GRGCYC	2 cut(s)	186, 992
EgeI	GGCGCC	2 cut(s)	564, 880
EheI	GGCGCC	2 cut(s)	564, 880
Esp3I	CGTCTC	1 cut(s)	1172
FaeI	CATG	2 cut(s)	1204, 1279
FaqI	GGGAC	1 cut(s)	47
FatI	CATG	2 cut(s)	1200, 1275
FauI	CCCGC	2 cut(s)	185, 302
FbaI	TGATCA	3 cut(s)	591, 1168, 1323
FblI	GTMKAC	1 cut(s)	1412
Fnu4HI	GCNGC	4 cut(s)	5, 280, 355, 716
FokI	GGATG	6 cut(s)	260, 818, 866, 1058, 1283, 1388
FriOI	GRGCYC	2 cut(s)	186, 992
Fsp4HI	GCNGC	4 cut(s)	5, 280, 355, 716
FspBI	CTAG	1 cut(s)	1436
GlaI	GCGC	6 cut(s)	158, 298, 564, 719, 880, 996
GluI	GCNGC	4 cut(s)	5, 280, 355, 716
GsuI	CTGGAG	1 cut(s)	1176
HaeII	RGCGCY	4 cut(s)	160, 566, 882, 998
HaeIII	GGCC	1 cut(s)	136
HapII	CCGG	3 cut(s)	13, 237, 1091
HgaI	GACGC	1 cut(s)	382
HhaI	GCGC	6 cut(s)	159, 299, 565, 720, 881, 997
Hin1I	GRCGYC	3 cut(s)	393, 563, 879
Hin1II	CATG	2 cut(s)	1204, 1279
Hin6I	GCGC	6 cut(s)	157, 297, 563, 718, 879, 995
HinP1I	GCGC	6 cut(s)	157, 297, 563, 718, 879, 995
HindIII	AAGCTT	1 cut(s)	912
HinfI	GANTC	5 cut(s)	240, 502, 1332, 1480, 1522
HpaII	CCGG	3 cut(s)	13, 237, 1091
HphI	GGTGA	9 cut(s)	46, 70, 106, 166, 296, 691, 761, 1021, 1525
Hpy166II	GTNNAC	3 cut(s)	523, 1055, 1413
Hpy188I	TCNGA	5 cut(s)	328, 350, 501, 537, 1299
Hpy188III	TCNNGA	6 cut(s)	421, 506, 776, 1193, 1201, 1224
Hpy8I	GTNNAC	3 cut(s)	523, 1055, 1413
Hpy99I	CGWCG	2 cut(s)	92, 398
HpyAV	CCTTC	7 cut(s)	43, 76, 85, 1025, 1030, 1129, 1348
HpyCH4III	ACNGT	4 cut(s)	112, 603, 1059, 1477
HpyCH4IV	ACGT	1 cut(s)	1212
HpyCH4V	TGCA	3 cut(s)	543, 629, 1086
HpyF10VI	GCNNNNNNNGC	4 cut(s)	288, 390, 456, 826
HpyF3I	CTNAG	1 cut(s)	1502
HpySE526I	ACGT	1 cut(s)	1212
Hsp92I	GRCGYC	3 cut(s)	393, 563, 879
Hsp92II	CATG	2 cut(s)	1204, 1279
HspAI	GCGC	6 cut(s)	157, 297, 563, 718, 879, 995
KasI	GGCGCC	2 cut(s)	562, 878
Ksp22I	TGATCA	3 cut(s)	591, 1168, 1323
Kzo9I	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
LmnI	GCTCC	1 cut(s)	296
LweI	GCATC	2 cut(s)	341, 1036
MabI	ACCWGGT	1 cut(s)	633
MaeI	CTAG	1 cut(s)	1436
MaeII	ACGT	1 cut(s)	1212
MaeIII	GTNAC	4 cut(s)	112, 679, 781, 889
MalI	GATC	5 cut(s)	315, 593, 1170, 1325, 1490
MbiI	CCGCTC	1 cut(s)	291
MboI	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
MboII	GAAGA	6 cut(s)	202, 358, 985, 1075, 1087, 1090
MflI	RGATCY	1 cut(s)	1488
MhlI	GDGCHC	5 cut(s)	186, 642, 672, 992, 1112
MluCI	AATT	7 cut(s)	250, 443, 949, 1081, 1142, 1300, 1362
Mly113I	GGCGCC	2 cut(s)	563, 879
MmeI	TCCRAC	2 cut(s)	351, 948
MroXI	GAANNNNTTC	1 cut(s)	1535
MseI	TTAA	3 cut(s)	843, 948, 957
MspI	CCGG	3 cut(s)	13, 237, 1091
MspR9I	CCNGG	4 cut(s)	237, 635, 1156, 1485
Mva1269I	GAATGC	2 cut(s)	416, 481
MvaI	CCWGG	3 cut(s)	635, 1156, 1485
MvnI	CGCG	4 cut(s)	180, 297, 715, 720
MwoI	GCNNNNNNNGC	4 cut(s)	288, 390, 456, 826
NarI	GGCGCC	2 cut(s)	563, 879
NciI	CCSGG	1 cut(s)	237
NdeII	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
NlaIII	CATG	2 cut(s)	1204, 1279
NlaIV	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
NmeAIII	GCCGAG	1 cut(s)	971
NmuCI	GTSAC	3 cut(s)	112, 679, 781
NspV	TTCGAA	1 cut(s)	1386
PagI	TCATGA	1 cut(s)	1200
PctI	GAATGC	2 cut(s)	416, 481
PdmI	GAANNNNTTC	1 cut(s)	1535
PfeI	GAWTC	5 cut(s)	240, 502, 1332, 1480, 1522
PkrI	GCNGC	4 cut(s)	6, 281, 356, 717
PluTI	GGCGCC	2 cut(s)	566, 882
PpuMI	RGGWCCY	2 cut(s)	361, 468
Psp124BI	GAGCTC	1 cut(s)	992
Psp5II	RGGWCCY	2 cut(s)	361, 468
Psp6I	CCWGG	3 cut(s)	633, 1154, 1483
PspGI	CCWGG	3 cut(s)	633, 1154, 1483
PspN4I	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
PspPI	GGNCC	3 cut(s)	135, 361, 468
PspPPI	RGGWCCY	2 cut(s)	361, 468
PstI	CTGCAG	1 cut(s)	545
PsuI	RGATCY	1 cut(s)	1488
RsaI	GTAC	1 cut(s)	453
RsaNI	GTAC	1 cut(s)	452
SacI	GAGCTC	1 cut(s)	992
SaqAI	TTAA	3 cut(s)	843, 948, 957
SatI	GCNGC	4 cut(s)	5, 280, 355, 716
Sau3AI	GATC	5 cut(s)	313, 591, 1168, 1323, 1488
Sau96I	GGNCC	3 cut(s)	135, 361, 468
ScrFI	CCNGG	4 cut(s)	237, 635, 1156, 1485
SduI	GDGCHC	5 cut(s)	186, 642, 672, 992, 1112
SexAI	ACCWGGT	1 cut(s)	633
SfaNI	GCATC	2 cut(s)	341, 1036
SfcI	CTRYAG	1 cut(s)	541
SfoI	GGCGCC	2 cut(s)	564, 880
SfuI	TTCGAA	1 cut(s)	1386
SinI	GGWCC	2 cut(s)	361, 468
Sse9I	AATT	7 cut(s)	250, 443, 949, 1081, 1142, 1300, 1362
SspDI	GGCGCC	2 cut(s)	562, 878
SspMI	CTAG	1 cut(s)	1436
SstI	GAGCTC	1 cut(s)	992
StyD4I	CCNGG	4 cut(s)	235, 633, 1154, 1483
TaaI	ACNGT	4 cut(s)	112, 603, 1059, 1477
TaiI	ACGT	1 cut(s)	1215
TaqI	TCGA	5 cut(s)	90, 192, 312, 642, 1386
TasI	AATT	7 cut(s)	250, 443, 949, 1081, 1142, 1300, 1362
TauI	GCSGC	3 cut(s)	282, 357, 718
TfiI	GAWTC	5 cut(s)	240, 502, 1332, 1480, 1522
Tru1I	TTAA	3 cut(s)	843, 948, 957
Tru9I	TTAA	3 cut(s)	843, 948, 957
TscAI	CASTG	3 cut(s)	606, 1127, 1482
TseFI	GTSAC	3 cut(s)	112, 679, 781
TseI	GCWGC	1 cut(s)	4
Tsp45I	GTSAC	3 cut(s)	112, 679, 781
TspDTI	ATGAA	2 cut(s)	358, 660
TspRI	CASTG	3 cut(s)	606, 1127, 1482
VpaK11BI	GGWCC	2 cut(s)	361, 468
XagI	CCTNNNNNAGG	1 cut(s)	1501
XapI	RAATTY	2 cut(s)	443, 1300
XcmI	CCANNNNNNNNNTGG	1 cut(s)	129
XmiI	GTMKAC	1 cut(s)	1412
XmnI	GAANNNNTTC	1 cut(s)	1535
XspI	CTAG	1 cut(s)	1436

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.