Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 54, 287 |
| AcyI | GRCGYC | 1 cut(s) | 288 |
| AdeI | CACNNNGTG | 1 cut(s) | 118 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 140 |
| AgsI | TTSAA | 2 cut(s) | 20, 320 |
| AjnI | CCWGG | 1 cut(s) | 114 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 24, 56 |
| AluBI | AGCT | 2 cut(s) | 323, 399 |
| AluI | AGCT | 2 cut(s) | 323, 399 |
| Alw21I | GWGCWC | 3 cut(s) | 123, 401, 408 |
| ApeKI | GCWGC | 1 cut(s) | 182 |
| AseI | ATTAAT | 1 cut(s) | 357 |
| AspLEI | GCGC | 1 cut(s) | 290 |
| AsuHPI | GGTGA | 3 cut(s) | 172, 212, 430 |
| BanI | GGYRCC | 2 cut(s) | 54, 287 |
| BanII | GRGCYC | 1 cut(s) | 401 |
| Bbv12I | GWGCWC | 3 cut(s) | 123, 401, 408 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BccI | CCATC | 2 cut(s) | 232, 262 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 116, 150, 343, 377, 385, 419 |
| BciT130I | CCWGG | 1 cut(s) | 116 |
| BclI | TGATCA | 1 cut(s) | 72 |
| BfaI | CTAG | 2 cut(s) | 153, 496 |
| BfoI | RGCGCY | 1 cut(s) | 291 |
| BisI | GCNGC | 1 cut(s) | 183 |
| BlsI | GCNGC | 1 cut(s) | 184 |
| Bme1390I | CCNGG | 1 cut(s) | 116 |
| BmiI | GGNNCC | 2 cut(s) | 56, 289 |
| BmrFI | CCNGG | 1 cut(s) | 116 |
| BmsI | GCATC | 2 cut(s) | 16, 445 |
| BsaHI | GRCGYC | 1 cut(s) | 288 |
| BsaJI | CCNNGG | 1 cut(s) | 138 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseBI | CCWGG | 1 cut(s) | 116 |
| BseDI | CCNNGG | 1 cut(s) | 138 |
| BseGI | GGATG | 3 cut(s) | 247, 268, 460 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| BsgI | GTGCAG | 1 cut(s) | 93 |
| BshNI | GGYRCC | 2 cut(s) | 54, 287 |
| BsiHKAI | GWGCWC | 3 cut(s) | 123, 401, 408 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BsmI | GAATGC | 1 cut(s) | 26 |
| Bsp1286I | GDGCHC | 3 cut(s) | 123, 401, 408 |
| Bsp143I | GATC | 1 cut(s) | 72 |
| BspLI | GGNNCC | 2 cut(s) | 56, 289 |
| BspT107I | GGYRCC | 2 cut(s) | 54, 287 |
| BssECI | CCNNGG | 1 cut(s) | 138 |
| BssMI | GATC | 1 cut(s) | 72 |
| BssNI | GRCGYC | 1 cut(s) | 288 |
| Bst2UI | CCWGG | 1 cut(s) | 116 |
| Bst4CI | ACNGT | 3 cut(s) | 54, 84, 468 |
| Bst6I | CTCTTC | 2 cut(s) | 377, 467 |
| BstACI | GRCGYC | 1 cut(s) | 288 |
| BstC8I | GCNNGC | 1 cut(s) | 135 |
| BstDEI | CTNAG | 1 cut(s) | 365 |
| BstDSI | CCRYGG | 1 cut(s) | 138 |
| BstF5I | GGATG | 3 cut(s) | 247, 268, 460 |
| BstH2I | RGCGCY | 1 cut(s) | 291 |
| BstHHI | GCGC | 1 cut(s) | 290 |
| BstKTI | GATC | 1 cut(s) | 75 |
| BstMBI | GATC | 1 cut(s) | 72 |
| BstNI | CCWGG | 1 cut(s) | 116 |
| BstSCI | CCNGG | 1 cut(s) | 114 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BtgI | CCRYGG | 1 cut(s) | 138 |
| BtgZI | GCGATG | 1 cut(s) | 39 |
| BtsCI | GGATG | 3 cut(s) | 247, 268, 460 |
| BtsI | GCAGTG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 2 cut(s) | 80, 105 |
| Cac8I | GCNNGC | 1 cut(s) | 135 |
| CfoI | GCGC | 1 cut(s) | 290 |
| CsiI | ACCWGGT | 1 cut(s) | 114 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 127, 162 |
| CviJI | RGCY | 5 cut(s) | 182, 248, 323, 399, 478 |
| CviKI_1 | RGCY | 5 cut(s) | 182, 248, 323, 399, 478 |
| DdeI | CTNAG | 1 cut(s) | 365 |
| DinI | GGCGCC | 1 cut(s) | 289 |
| DpnI | GATC | 1 cut(s) | 74 |
| DpnII | GATC | 1 cut(s) | 72 |
| DraIII | CACNNNGTG | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 2 cut(s) | 377, 467 |
| EarI | CTCTTC | 2 cut(s) | 377, 467 |
| Ecl136II | GAGCTC | 1 cut(s) | 399 |
| Eco24I | GRGCYC | 1 cut(s) | 401 |
| Eco53kI | GAGCTC | 1 cut(s) | 399 |
| EcoICRI | GAGCTC | 1 cut(s) | 399 |
| EcoRII | CCWGG | 1 cut(s) | 114 |
| EcoT38I | GRGCYC | 1 cut(s) | 401 |
| EgeI | GGCGCC | 1 cut(s) | 289 |
| EheI | GGCGCC | 1 cut(s) | 289 |
| FaiI | YATR | 7 cut(s) | 68, 251, 260, 306, 374, 390, 392 |
| FbaI | TGATCA | 1 cut(s) | 72 |
| Fnu4HI | GCNGC | 1 cut(s) | 183 |
| FokI | GGATG | 3 cut(s) | 254, 275, 467 |
| FriOI | GRGCYC | 1 cut(s) | 401 |
| Fsp4HI | GCNGC | 1 cut(s) | 183 |
| FspBI | CTAG | 2 cut(s) | 153, 496 |
| GlaI | GCGC | 1 cut(s) | 289 |
| GluI | GCNGC | 1 cut(s) | 183 |
| HaeII | RGCGCY | 1 cut(s) | 291 |
| HhaI | GCGC | 1 cut(s) | 290 |
| Hin1I | GRCGYC | 1 cut(s) | 288 |
| Hin6I | GCGC | 1 cut(s) | 288 |
| HinP1I | GCGC | 1 cut(s) | 288 |
| HindIII | AAGCTT | 1 cut(s) | 321 |
| HinfI | GANTC | 1 cut(s) | 32 |
| HphI | GGTGA | 3 cut(s) | 172, 212, 430 |
| Hpy166II | GTNNAC | 1 cut(s) | 464 |
| Hpy188I | TCNGA | 1 cut(s) | 49 |
| Hpy188III | TCNNGA | 1 cut(s) | 379 |
| Hpy8I | GTNNAC | 1 cut(s) | 464 |
| Hpy99I | CGWCG | 1 cut(s) | 128 |
| HpyAV | CCTTC | 1 cut(s) | 247 |
| HpyCH4III | ACNGT | 3 cut(s) | 54, 84, 468 |
| HpyCH4V | TGCA | 3 cut(s) | 87, 110, 438 |
| HpyF3I | CTNAG | 1 cut(s) | 365 |
| Hsp92I | GRCGYC | 1 cut(s) | 288 |
| HspAI | GCGC | 1 cut(s) | 288 |
| KasI | GGCGCC | 1 cut(s) | 287 |
| Ksp22I | TGATCA | 1 cut(s) | 72 |
| Kzo9I | GATC | 1 cut(s) | 72 |
| LmnI | GCTCC | 1 cut(s) | 9 |
| LpnPI | CCDG | 3 cut(s) | 101, 128, 147 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| LweI | GCATC | 2 cut(s) | 16, 445 |
| MabI | ACCWGGT | 1 cut(s) | 114 |
| MaeI | CTAG | 2 cut(s) | 153, 496 |
| MaeIII | GTNAC | 4 cut(s) | 160, 224, 298, 329 |
| MalI | GATC | 1 cut(s) | 74 |
| MboI | GATC | 1 cut(s) | 72 |
| MboII | GAAGA | 3 cut(s) | 349, 394, 484 |
| MhlI | GDGCHC | 3 cut(s) | 123, 401, 408 |
| MluCI | AATT | 2 cut(s) | 358, 490 |
| Mly113I | GGCGCC | 1 cut(s) | 288 |
| MnlI | CCTC | 8 cut(s) | 4, 209, 238, 265, 289, 378, 445, 468 |
| MseI | TTAA | 1 cut(s) | 357 |
| MspR9I | CCNGG | 1 cut(s) | 116 |
| Mva1269I | GAATGC | 1 cut(s) | 26 |
| MvaI | CCWGG | 1 cut(s) | 116 |
| NarI | GGCGCC | 1 cut(s) | 288 |
| NdeII | GATC | 1 cut(s) | 72 |
| NlaIV | GGNNCC | 2 cut(s) | 56, 289 |
| NmuCI | GTSAC | 2 cut(s) | 160, 224 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 21, 350 |
| PctI | GAATGC | 1 cut(s) | 26 |
| PfeI | GAWTC | 1 cut(s) | 32 |
| PkrI | GCNGC | 1 cut(s) | 184 |
| PluTI | GGCGCC | 1 cut(s) | 291 |
| PshBI | ATTAAT | 1 cut(s) | 357 |
| Psp124BI | GAGCTC | 1 cut(s) | 401 |
| Psp6I | CCWGG | 1 cut(s) | 114 |
| PspGI | CCWGG | 1 cut(s) | 114 |
| PspN4I | GGNNCC | 2 cut(s) | 56, 289 |
| SacI | GAGCTC | 1 cut(s) | 401 |
| SaqAI | TTAA | 1 cut(s) | 357 |
| SatI | GCNGC | 1 cut(s) | 183 |
| Sau3AI | GATC | 1 cut(s) | 72 |
| ScrFI | CCNGG | 1 cut(s) | 116 |
| SduI | GDGCHC | 3 cut(s) | 123, 401, 408 |
| SetI | ASST | 9 cut(s) | 15, 120, 258, 300, 325, 389, 401, 420, 450 |
| SexAI | ACCWGGT | 1 cut(s) | 114 |
| SfaNI | GCATC | 2 cut(s) | 16, 445 |
| SfoI | GGCGCC | 1 cut(s) | 289 |
| Sse9I | AATT | 2 cut(s) | 358, 490 |
| SspDI | GGCGCC | 1 cut(s) | 287 |
| SspMI | CTAG | 2 cut(s) | 153, 496 |
| SstI | GAGCTC | 1 cut(s) | 401 |
| StyD4I | CCNGG | 1 cut(s) | 114 |
| TaaI | ACNGT | 3 cut(s) | 54, 84, 468 |
| TaqI | TCGA | 2 cut(s) | 123, 378 |
| TasI | AATT | 2 cut(s) | 358, 490 |
| TfiI | GAWTC | 1 cut(s) | 32 |
| Tru1I | TTAA | 1 cut(s) | 357 |
| Tru9I | TTAA | 1 cut(s) | 357 |
| TscAI | CASTG | 2 cut(s) | 87, 112 |
| TseFI | GTSAC | 2 cut(s) | 160, 224 |
| TseI | GCWGC | 1 cut(s) | 182 |
| Tsp45I | GTSAC | 2 cut(s) | 160, 224 |
| TspDTI | ATGAA | 1 cut(s) | 266 |
| TspRI | CASTG | 2 cut(s) | 87, 112 |
| VspI | ATTAAT | 1 cut(s) | 357 |
| XspI | CTAG | 2 cut(s) | 153, 496 |