Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0000530

Physical Location & Seq

Genomic Coordinates Reverse (-)

31673230 .. 31674837

Gene Structure 1608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029026

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGCTGCTGCGCCGGAACCTCTCCCCCAAACCCTTCTCTCTCCTCCACTCAATCACCGCCGTCCCCTTCTCCACCTCCACCTCCTCCGCCGTAGATTTCCTCCCTTCCTACACCGTCACCCCTCCGATCCAAGAGTGGCCCCAACACCTCCACCCAAAGCGCCTCATCTCCCTCATCACCCGCGAGCCCAAACTCGACCTCGCCCTCCAAATCTTCCACCACGCCTCCAAATACCACCCCGGATTCCACCATAATTACCACACCTACCAAGCCATCATCCGCCGCCTCCTCCGGTCCCGCGCTTTTCACCTCATCGACCCCCTCCTCTCCGACCTCCGCACCTCCAATCTCCGATGCGGCGAGGACCTCTTCATCTCCCTAATCCGCAACTACGGCGTCGTTTCACGCCCCAAACTCGCATTCAAGACATTTCTTACCATTCCGAAATTCGGCGTACAACGCTCTGTGAGGGAGAGGTTCGGGGTGGCGCCGAATGTGTTTAGTTGTAATATATTGATCAAAGCACTGTGTAAGAGAAATGATTTGGAGACTGCACACCAGGTGCTCGATGAAATGCCTGCGATGGGATTTGTGCCCAATGTGGTGACTTTTACTACCATTTTGGGCGGTTATGTGTCGCGGCGCGATATGGTTGGTGCCAACAGGGTGTTTGGTGAGATTTTGGACAGAGGGTGGTTTCCTGATGTGACTACATATACTATATTGATGGATGGGTATGTGAAGCAGGGGAAGCTGGTTGAGGCTATTAAGGTTATGGATGAGATGGAGGATAATGGGGTTGGCGCCAATGAGGTTACTTATGGGGTTATGATTGAAGCTTATTGTAAGGAAAAGAAGTCGGGCGAAGCGGTTAATTTGCTTAATGATATGGTGGAGAAGAGGTATATACCGAGCTCGGCGCTCTGTTGTAAGGTGATTGATGTTTTGTGTTGCAAAGGGAAGGTGGAGGATGCTTGTGAACTGTGGAAGAGGCTTTTGAAGAAGAATTGCATGCCGGATAATGCGGTATTGGGCACGCTCATATACTGGCTTTGTAAGAAAGGAGAGGTGTGGGAAGCCAGGAGTTTGTTTGATCAGTTTGAGACGAGTGAGCCTCCGGATGTCATGAGTTACAACGTGCTTATTTCTGGAATGTGTGAAGTGGGGGAGTTGTGTGAGGCAGGGAGGTTGTGGGATGACATGGTGGAGAAAGGATATTTTCCGAATTCTTTTACACATAATGTATTGGTCAAAAGATTCTGTACGATTGGAAAAGCGAAGGAGGGAATTAGGATTTTGGACGAGATGTTCGAAAAAGGCTGTTTGCCAAACAAGTCTACTTATGCAATGTTGATTGAGGGGCTCTGTGACTCAGGAGAGGAAGCTGGAATGGCTAGAGTAATACCTATGGCAATATCAAGTGGAGACATTGACAGTGATTCCTGGGATCTTTTCCTTACTAAAGTTGTTGGTGATTTGGATACTGGGGAAAGTGTTCTAGACAGAATACTACTGGAGAATGCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

510

Amino Acids

57.39

Weight (kDa)

6.22

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	159 - 213	3.6e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	161 - 192	2.8e-08	PPR repeat
PPR_2	PF13041	164 - 211	1.2e-14	PPR repeat family
PPR_2	PF13041	199 - 248	4.1e-13	PPR repeat family
PPR_3	PF13812	223 - 283	5.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	231 - 263	4.9e-09	PPR repeat
PPR_2	PF13041	234 - 283	2.2e-16	PPR repeat family
PPR	PF01535	238 - 267	2.8e-08	PPR repeat
PPR_1	PF12854	266 - 298	4.4e-06	PPR repeat
PPR_2	PF13041	270 - 306	2.2e-07	PPR repeat family
PPR	PF01535	272 - 301	2.7e-06	PPR repeat
PPR_2	PF13041	311 - 353	3.6e-06	PPR repeat family
PPR_2	PF13041	373 - 421	1.1e-14	PPR repeat family
PPR_1	PF12854	373 - 402	1.1e-06	PPR repeat
PPR_2	PF13041	414 - 457	2.2e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16420 AT5G16420 AT5G16420 AT5G16420
fragaria_vesca	FvH4_7g08341 FvH4_7g08360
malus_domestica	MD02G1232100.v1.1 MD07G1081300.v1.1
prunus_persica	Prupe.2G106500_v2.0.a1
pyrus_communis	pycom02g20040
rosa_chinensis	RchiOBHm_Chr1g0340331 RchiOBHm_Chr1g0340431 RchiOBHm_Chr1g0340441 RchiOBHm_Chr1g0340491 RchiOBHm_Chr1g0340531 RchiOBHm_Chr1g0340541 RchiOBHm_Chr1g0340561 RchiOBHm_Chr1g0340621 RchiOBHm_Chr1g0340661 RchiOBHm_Chr1g0340691
rosa_laevigata	RLG00000029013 RLG00000029018 RLG00000029020 RLG00000029024 RLG00000029026 RLG00000029029 RLG00000029030 RLG00000029032 RLG00000029033
rosa_multiflora	Rmu_sc0000566.1_g000026 Rmu_sc0000566.1_g000034 Rmu_sc0000566.1_g000054 Rmu_sc0001836.1_g000016 Rmu_sc0001836.1_g000022 Rmu_sc0001836.1_g000023 Rmu_sc0001836.1_g000028 Rmu_sc0001836.1_g000058 Rmu_sc0001946.1_g000004 Rmu_sc0002595.1_g000001 Rmu_sc0002595.1_g000005 Rmu_sc0005167.1_g000003 Rmu_sc0005167.1_g000009 Rmu_sc0005167.1_g000018 Rmu_sc0024761.1_g000004
rosa_roxburghii	Rroxscaffold_4G00311170 Rroxscaffold_4G00311190 Rroxscaffold_4G00311250 Rroxscaffold_4G00315930 Rroxscaffold_4G00315960 Rroxscaffold_5G00353270
rosa_rugosa	Rorug01G0162000.1 Rorug01G0162500.1 Rorug01G0162800.1 Rorug01G0163000.1 Rorug01G0163400.1 Rorug01G0163700.1 Rorug01G0164100.1 Rorug01G0164300 Rorug05G0484800
rosa_samantha	Rh1AG177800 Rh1AG178000 Rh1AG178300 Rh1AG178600 Rh1AG178900 Rh1BG145300 Rh1BG145600 Rh1BG145800 Rh1BG145900 Rh1BG146000 Rh1BG146700 Rh1CG165100 Rh1CG165200 Rh1CG165400 Rh1CG165600 Rh1CG165700 Rh1CG165900 Rh1DG177500 Rh1DG177600 Rh1DG177800 Rh1DG177900 Rh1DG178000 Rh1DG178800
rosa_wichuraiana	Rw0G006210 Rw1G014800 Rw1G014890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	487, 656, 803
AccI	GTMKAC	1 cut(s)	1337
AccII	CGCG	4 cut(s)	183, 300, 640, 645
AccIII	TCCGGA	1 cut(s)	1117
AclWI	GGATC	2 cut(s)	121, 1455
AcsI	RAATTY	2 cut(s)	446, 1225
AcyI	GRCGYC	3 cut(s)	396, 488, 804
AdeI	CACNNNGTG	1 cut(s)	562
AfaI	GTAC	2 cut(s)	456, 1264
AfiI	CCNNNNNNNGG	2 cut(s)	449, 584
AgsI	TTSAA	3 cut(s)	424, 836, 1000
AjnI	CCWGG	3 cut(s)	558, 1079, 1442
AjuI	GAANNNNNNNTTGG	2 cut(s)	404, 436
AloI	GAACNNNNNNTCC	2 cut(s)	1292, 1324
AluBI	AGCT	4 cut(s)	754, 839, 915, 1385
AluI	AGCT	4 cut(s)	754, 839, 915, 1385
Alw21I	GWGCWC	2 cut(s)	567, 917
Alw26I	GTCTC	3 cut(s)	542, 1097, 1419
AlwI	GGATC	2 cut(s)	121, 1455
Aor13HI	TCCGGA	1 cut(s)	1117
AoxI	GGCC	1 cut(s)	137
ApeKI	GCWGC	2 cut(s)	4, 7
ApoI	RAATTY	2 cut(s)	446, 1225
ArsI	GACNNNNNNTTYG	2 cut(s)	1292, 1324
Asp700I	GAANNNNTTC	1 cut(s)	1494
AspLEI	GCGC	7 cut(s)	12, 162, 302, 490, 645, 806, 922
AspS9I	GGNCC	3 cut(s)	138, 294, 364
AsuC2I	CCSGG	1 cut(s)	240
AsuHPI	GGTGA	8 cut(s)	46, 109, 169, 299, 616, 686, 946, 1484
AsuII	TTCGAA	1 cut(s)	1311
AvaII	GGWCC	2 cut(s)	294, 364
BaeGI	GKGCMC	2 cut(s)	597, 1037
BanI	GGYRCC	3 cut(s)	487, 656, 803
BanII	GRGCYC	3 cut(s)	189, 917, 1365
Bbv12I	GWGCWC	2 cut(s)	567, 917
BccI	CCATC	5 cut(s)	281, 577, 721, 725, 778
BceAI	ACGGC	3 cut(s)	44, 74, 409
BciT130I	CCWGG	3 cut(s)	560, 1081, 1444
BciVI	GTATCC	1 cut(s)	1474
BclI	TGATCA	2 cut(s)	516, 1093
BcnI	CCSGG	1 cut(s)	240
BcoDI	GTCTC	3 cut(s)	542, 1097, 1419
BfaI	CTAG	2 cut(s)	1395, 1499
BfoI	RGCGCY	4 cut(s)	163, 491, 807, 923
BfuI	GTATCC	1 cut(s)	1474
BisI	GCNGC	5 cut(s)	5, 8, 283, 358, 641
BlsI	GCNGC	5 cut(s)	6, 9, 284, 359, 642
Bme1390I	CCNGG	4 cut(s)	240, 560, 1081, 1444
Bme18I	GGWCC	2 cut(s)	294, 364
BmgT120I	GGNCC	3 cut(s)	138, 294, 364
BmiI	GGNNCC	6 cut(s)	17, 140, 296, 489, 658, 805
BmrFI	CCNGG	4 cut(s)	240, 560, 1081, 1444
BmrI	ACTGGG	1 cut(s)	1494
BmsI	GCATC	2 cut(s)	344, 961
BmuI	ACTGGG	1 cut(s)	1494
BplI	GAGNNNNNCTC	2 cut(s)	1099, 1131
Bpu14I	TTCGAA	1 cut(s)	1311
BpuMI	CCSGG	1 cut(s)	240
BsaHI	GRCGYC	3 cut(s)	396, 488, 804
BsaJI	CCNNGG	2 cut(s)	238, 1443
BsaWI	WCCGGW	2 cut(s)	291, 1117
BsaXI	ACNNNNNCTCC	4 cut(s)	209, 239, 887, 917
Bsc4I	CCNNNNNNNGG	2 cut(s)	449, 584
Bse1I	ACTGG	3 cut(s)	1052, 1489, 1518
Bse3DI	GCAATG	1 cut(s)	1353
BseAI	TCCGGA	1 cut(s)	1117
BseBI	CCWGG	3 cut(s)	560, 1081, 1444
BseDI	CCNNGG	2 cut(s)	238, 1443
BseGI	GGATG	6 cut(s)	276, 736, 784, 976, 1126, 1201
BseLI	CCNNNNNNNGG	2 cut(s)	449, 584
BseMI	GCAATG	1 cut(s)	1353
BseMII	CTCAG	1 cut(s)	1386
BseNI	ACTGG	3 cut(s)	1052, 1489, 1518
BseRI	GAGGAG	4 cut(s)	32, 73, 278, 314
BseSI	GKGCMC	2 cut(s)	597, 1037
BsgI	GTGCAG	1 cut(s)	537
Bsh1236I	CGCG	4 cut(s)	183, 300, 640, 645
BshFI	GGCC	1 cut(s)	139
BshNI	GGYRCC	3 cut(s)	487, 656, 803
BsiHKAI	GWGCWC	2 cut(s)	567, 917
BsiSI	CCGG	5 cut(s)	13, 240, 292, 1016, 1118
BslFI	GGGAC	2 cut(s)	47, 280
BslI	CCNNNNNNNGG	2 cut(s)	449, 584
BsmAI	GTCTC	3 cut(s)	542, 1097, 1419
BsmBI	CGTCTC	1 cut(s)	1097
BsmFI	GGGAC	2 cut(s)	47, 280
BsmI	GAATGC	2 cut(s)	419, 1525
BsnI	GGCC	1 cut(s)	139
Bsp119I	TTCGAA	1 cut(s)	1311
Bsp1286I	GDGCHC	6 cut(s)	189, 567, 597, 917, 1037, 1365
Bsp13I	TCCGGA	1 cut(s)	1117
Bsp143I	GATC	4 cut(s)	126, 516, 1093, 1447
BspANI	GGCC	1 cut(s)	139
BspCNI	CTCAG	1 cut(s)	1385
BspEI	TCCGGA	1 cut(s)	1117
BspFNI	CGCG	4 cut(s)	183, 300, 640, 645
BspHI	TCATGA	1 cut(s)	1125
BspLI	GGNNCC	6 cut(s)	17, 140, 296, 489, 658, 805
BspPI	GGATC	2 cut(s)	121, 1455
BspT104I	TTCGAA	1 cut(s)	1311
BspT107I	GGYRCC	3 cut(s)	487, 656, 803
BsrDI	GCAATG	1 cut(s)	1353
BsrI	ACTGG	3 cut(s)	1052, 1489, 1518
BssECI	CCNNGG	2 cut(s)	238, 1443
BssMI	GATC	4 cut(s)	126, 516, 1093, 1447
BssNI	GRCGYC	3 cut(s)	396, 488, 804
Bst2UI	CCWGG	3 cut(s)	560, 1081, 1444
Bst4CI	ACNGT	4 cut(s)	115, 528, 984, 1436
Bst6I	CTCTTC	3 cut(s)	374, 893, 983
BstACI	GRCGYC	3 cut(s)	396, 488, 804
BstBI	TTCGAA	1 cut(s)	1311
BstC8I	GCNNGC	4 cut(s)	185, 579, 1013, 1037
BstDEI	CTNAG	1 cut(s)	1372
BstF5I	GGATG	6 cut(s)	276, 736, 784, 976, 1126, 1201
BstFNI	CGCG	4 cut(s)	183, 300, 640, 645
BstH2I	RGCGCY	4 cut(s)	163, 491, 807, 923
BstHHI	GCGC	7 cut(s)	12, 162, 302, 490, 645, 806, 922
BstKTI	GATC	4 cut(s)	129, 519, 1096, 1450
BstMAI	GTCTC	3 cut(s)	542, 1097, 1419
BstMBI	GATC	4 cut(s)	126, 516, 1093, 1447
BstMWI	GCNNNNNNNGC	4 cut(s)	393, 459, 751, 1391
BstNI	CCWGG	3 cut(s)	560, 1081, 1444
BstNSI	RCATGY	1 cut(s)	1015
BstSCI	CCNGG	4 cut(s)	238, 558, 1079, 1442
BstSLI	GKGCMC	2 cut(s)	597, 1037
BstUI	CGCG	4 cut(s)	183, 300, 640, 645
BstX2I	RGATCY	1 cut(s)	1447
BstYI	RGATCY	1 cut(s)	1447
BsuI	GTATCC	1 cut(s)	1474
BsuRI	GGCC	1 cut(s)	139
BtgZI	GCGATG	1 cut(s)	596
BtsCI	GGATG	6 cut(s)	276, 736, 784, 976, 1126, 1201
BtsIMutI	CAGTG	2 cut(s)	524, 1441
Cac8I	GCNNGC	4 cut(s)	185, 579, 1013, 1037
CciI	TCATGA	1 cut(s)	1125
CfoI	GCGC	7 cut(s)	12, 162, 302, 490, 645, 806, 922
Cfr13I	GGNCC	3 cut(s)	138, 294, 364
CseI	GACGC	1 cut(s)	385
CsiI	ACCWGGT	1 cut(s)	558
Csp6I	GTAC	2 cut(s)	455, 1263
CviAII	CATG	3 cut(s)	1012, 1126, 1201
CviQI	GTAC	2 cut(s)	455, 1263
DdeI	CTNAG	1 cut(s)	1372
DinI	GGCGCC	2 cut(s)	489, 805
DpnI	GATC	4 cut(s)	128, 518, 1095, 1449
DpnII	GATC	4 cut(s)	126, 516, 1093, 1447
DraIII	CACNNNGTG	1 cut(s)	562
Eam1104I	CTCTTC	3 cut(s)	374, 893, 983
EarI	CTCTTC	3 cut(s)	374, 893, 983
EciI	GGCGGA	2 cut(s)	76, 269
Ecl136II	GAGCTC	1 cut(s)	915
Eco24I	GRGCYC	3 cut(s)	189, 917, 1365
Eco47I	GGWCC	2 cut(s)	294, 364
Eco53kI	GAGCTC	1 cut(s)	915
EcoICRI	GAGCTC	1 cut(s)	915
EcoO109I	RGGNCCY	1 cut(s)	364
EcoRI	GAATTC	1 cut(s)	1225
EcoRII	CCWGG	3 cut(s)	558, 1079, 1442
EcoT38I	GRGCYC	3 cut(s)	189, 917, 1365
EgeI	GGCGCC	2 cut(s)	489, 805
EheI	GGCGCC	2 cut(s)	489, 805
Esp3I	CGTCTC	1 cut(s)	1097
FaeI	CATG	3 cut(s)	1015, 1129, 1204
FaqI	GGGAC	2 cut(s)	47, 280
FatI	CATG	3 cut(s)	1011, 1125, 1200
FauI	CCCGC	2 cut(s)	188, 305
FbaI	TGATCA	2 cut(s)	516, 1093
FblI	GTMKAC	1 cut(s)	1337
Fnu4HI	GCNGC	5 cut(s)	5, 8, 283, 358, 641
FokI	GGATG	6 cut(s)	263, 743, 791, 983, 1133, 1208
FriOI	GRGCYC	3 cut(s)	189, 917, 1365
Fsp4HI	GCNGC	5 cut(s)	5, 8, 283, 358, 641
FspBI	CTAG	2 cut(s)	1395, 1499
GlaI	GCGC	7 cut(s)	11, 161, 301, 489, 644, 805, 921
GluI	GCNGC	5 cut(s)	5, 8, 283, 358, 641
HaeII	RGCGCY	4 cut(s)	163, 491, 807, 923
HaeIII	GGCC	1 cut(s)	139
HapII	CCGG	5 cut(s)	13, 240, 292, 1016, 1118
HgaI	GACGC	1 cut(s)	385
HhaI	GCGC	7 cut(s)	12, 162, 302, 490, 645, 806, 922
Hin1I	GRCGYC	3 cut(s)	396, 488, 804
Hin1II	CATG	3 cut(s)	1015, 1129, 1204
Hin6I	GCGC	7 cut(s)	10, 160, 300, 488, 643, 804, 920
HinP1I	GCGC	7 cut(s)	10, 160, 300, 488, 643, 804, 920
HindIII	AAGCTT	1 cut(s)	837
HinfI	GANTC	4 cut(s)	243, 1257, 1370, 1439
HpaII	CCGG	5 cut(s)	13, 240, 292, 1016, 1118
HphI	GGTGA	8 cut(s)	46, 109, 169, 299, 616, 686, 946, 1484
Hpy166II	GTNNAC	2 cut(s)	980, 1338
Hpy188I	TCNGA	5 cut(s)	126, 331, 353, 444, 1224
Hpy188III	TCNNGA	7 cut(s)	424, 701, 1118, 1126, 1149, 1374, 1499
Hpy8I	GTNNAC	2 cut(s)	980, 1338
Hpy99I	CGWCG	1 cut(s)	401
HpyAV	CCTTC	5 cut(s)	43, 76, 114, 955, 1273
HpyCH4III	ACNGT	4 cut(s)	115, 528, 984, 1436
HpyCH4IV	ACGT	1 cut(s)	1137
HpyCH4V	TGCA	4 cut(s)	554, 954, 1011, 1346
HpyF10VI	GCNNNNNNNGC	4 cut(s)	393, 459, 751, 1391
HpyF3I	CTNAG	1 cut(s)	1372
HpySE526I	ACGT	1 cut(s)	1137
Hsp92I	GRCGYC	3 cut(s)	396, 488, 804
Hsp92II	CATG	3 cut(s)	1015, 1129, 1204
HspAI	GCGC	7 cut(s)	10, 160, 300, 488, 643, 804, 920
KasI	GGCGCC	2 cut(s)	487, 803
Kpn2I	TCCGGA	1 cut(s)	1117
Ksp22I	TGATCA	2 cut(s)	516, 1093
Kzo9I	GATC	4 cut(s)	126, 516, 1093, 1447
LweI	GCATC	2 cut(s)	344, 961
MabI	ACCWGGT	1 cut(s)	558
MaeI	CTAG	2 cut(s)	1395, 1499
MaeII	ACGT	1 cut(s)	1137
MaeIII	GTNAC	6 cut(s)	115, 604, 706, 814, 1130, 1367
MalI	GATC	4 cut(s)	128, 518, 1095, 1449
MboI	GATC	4 cut(s)	126, 516, 1093, 1447
MboII	GAAGA	6 cut(s)	205, 361, 910, 1000, 1012, 1015
MflI	RGATCY	1 cut(s)	1447
MhlI	GDGCHC	6 cut(s)	189, 567, 597, 917, 1037, 1365
MluCI	AATT	6 cut(s)	253, 446, 874, 1006, 1225, 1287
Mly113I	GGCGCC	2 cut(s)	488, 804
MlyI	GAGTC	1 cut(s)	1364
MmeI	TCCRAC	1 cut(s)	354
MroI	TCCGGA	1 cut(s)	1117
MroXI	GAANNNNTTC	1 cut(s)	1494
MseI	TTAA	3 cut(s)	768, 873, 882
MspI	CCGG	5 cut(s)	13, 240, 292, 1016, 1118
MspR9I	CCNGG	4 cut(s)	240, 560, 1081, 1444
Mva1269I	GAATGC	2 cut(s)	419, 1525
MvaI	CCWGG	3 cut(s)	560, 1081, 1444
MvnI	CGCG	4 cut(s)	183, 300, 640, 645
MwoI	GCNNNNNNNGC	4 cut(s)	393, 459, 751, 1391
NarI	GGCGCC	2 cut(s)	488, 804
NciI	CCSGG	1 cut(s)	240
NdeII	GATC	4 cut(s)	126, 516, 1093, 1447
NlaIII	CATG	3 cut(s)	1015, 1129, 1204
NlaIV	GGNNCC	6 cut(s)	17, 140, 296, 489, 658, 805
NmeAIII	GCCGAG	1 cut(s)	896
NmuCI	GTSAC	4 cut(s)	115, 604, 706, 1367
NspI	RCATGY	1 cut(s)	1015
NspV	TTCGAA	1 cut(s)	1311
PaeI	GCATGC	1 cut(s)	1015
PagI	TCATGA	1 cut(s)	1125
PcsI	WCGNNNNNNNCGW	1 cut(s)	1308
PctI	GAATGC	2 cut(s)	419, 1525
PdmI	GAANNNNTTC	1 cut(s)	1494
PfeI	GAWTC	3 cut(s)	243, 1257, 1439
PkrI	GCNGC	5 cut(s)	6, 9, 284, 359, 642
PleI	GAGTC	1 cut(s)	1364
PluTI	GGCGCC	2 cut(s)	491, 807
PpsI	GAGTC	1 cut(s)	1364
PpuMI	RGGWCCY	1 cut(s)	364
Psp124BI	GAGCTC	1 cut(s)	917
Psp5II	RGGWCCY	1 cut(s)	364
Psp6I	CCWGG	3 cut(s)	558, 1079, 1442
PspGI	CCWGG	3 cut(s)	558, 1079, 1442
PspN4I	GGNNCC	6 cut(s)	17, 140, 296, 489, 658, 805
PspPI	GGNCC	3 cut(s)	138, 294, 364
PspPPI	RGGWCCY	1 cut(s)	364
PsuI	RGATCY	1 cut(s)	1447
RsaI	GTAC	2 cut(s)	456, 1264
RsaNI	GTAC	2 cut(s)	455, 1263
SacI	GAGCTC	1 cut(s)	917
SaqAI	TTAA	3 cut(s)	768, 873, 882
SatI	GCNGC	5 cut(s)	5, 8, 283, 358, 641
Sau3AI	GATC	4 cut(s)	126, 516, 1093, 1447
Sau96I	GGNCC	3 cut(s)	138, 294, 364
SchI	GAGTC	1 cut(s)	1364
ScrFI	CCNGG	4 cut(s)	240, 560, 1081, 1444
SduI	GDGCHC	6 cut(s)	189, 567, 597, 917, 1037, 1365
SexAI	ACCWGGT	1 cut(s)	558
SfaNI	GCATC	2 cut(s)	344, 961
SfoI	GGCGCC	2 cut(s)	489, 805
SfuI	TTCGAA	1 cut(s)	1311
SinI	GGWCC	2 cut(s)	294, 364
SphI	GCATGC	1 cut(s)	1015
Sse9I	AATT	6 cut(s)	253, 446, 874, 1006, 1225, 1287
SspDI	GGCGCC	2 cut(s)	487, 803
SspMI	CTAG	2 cut(s)	1395, 1499
SstI	GAGCTC	1 cut(s)	917
StyD4I	CCNGG	4 cut(s)	238, 558, 1079, 1442
TaaI	ACNGT	4 cut(s)	115, 528, 984, 1436
TaiI	ACGT	1 cut(s)	1140
TaqI	TCGA	4 cut(s)	195, 315, 567, 1311
TasI	AATT	6 cut(s)	253, 446, 874, 1006, 1225, 1287
TauI	GCSGC	3 cut(s)	285, 360, 643
TfiI	GAWTC	3 cut(s)	243, 1257, 1439
Tru1I	TTAA	3 cut(s)	768, 873, 882
Tru9I	TTAA	3 cut(s)	768, 873, 882
TscAI	CASTG	2 cut(s)	531, 1441
TseFI	GTSAC	4 cut(s)	115, 604, 706, 1367
TseI	GCWGC	2 cut(s)	4, 7
Tsp45I	GTSAC	4 cut(s)	115, 604, 706, 1367
TspDTI	ATGAA	2 cut(s)	361, 585
TspRI	CASTG	2 cut(s)	531, 1441
VpaK11BI	GGWCC	2 cut(s)	294, 364
XapI	RAATTY	2 cut(s)	446, 1225
XbaI	TCTAGA	1 cut(s)	1498
XceI	RCATGY	1 cut(s)	1015
XmiI	GTMKAC	1 cut(s)	1337
XmnI	GAANNNNTTC	1 cut(s)	1494
XspI	CTAG	2 cut(s)	1395, 1499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.