Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 755 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 470 |
| AccBSI | CCGCTC | 1 cut(s) | 343 |
| AccI | GTMKAC | 1 cut(s) | 1436 |
| AccII | CGCG | 2 cut(s) | 318, 739 |
| AccIII | TCCGGA | 1 cut(s) | 799 |
| AciI | CCGC | 8 cut(s) | 37, 81, 87, 301, 316, 341, 968, 1247 |
| AcsI | RAATTY | 1 cut(s) | 248 |
| AcuI | CTGAAG | 1 cut(s) | 38 |
| AcyI | GRCGYC | 3 cut(s) | 163, 417, 756 |
| AdeI | CACNNNGTG | 1 cut(s) | 553 |
| AfaI | GTAC | 2 cut(s) | 1008, 1232 |
| AfeI | AGCGCT | 1 cut(s) | 624 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 470, 683, 700, 910 |
| AflIII | ACRYGT | 1 cut(s) | 594 |
| AgsI | TTSAA | 5 cut(s) | 445, 511, 935, 1099, 1201 |
| AjnI | CCWGG | 2 cut(s) | 152, 256 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 425, 457, 752, 784, 882, 914 |
| AleI | CACNNNNGTG | 1 cut(s) | 1496 |
| AluBI | AGCT | 6 cut(s) | 29, 436, 476, 938, 1270, 1592 |
| AluI | AGCT | 6 cut(s) | 29, 436, 476, 938, 1270, 1592 |
| Alw21I | GWGCWC | 4 cut(s) | 478, 666, 1136, 1321 |
| Alw26I | GTCTC | 3 cut(s) | 70, 641, 1518 |
| Ama87I | CYCGRG | 1 cut(s) | 1129 |
| Aor13HI | TCCGGA | 1 cut(s) | 799 |
| Aor51HI | AGCGCT | 1 cut(s) | 624 |
| AoxI | GGCC | 3 cut(s) | 155, 587, 901 |
| ApeKI | GCWGC | 1 cut(s) | 10 |
| ApoI | RAATTY | 1 cut(s) | 248 |
| AspLEI | GCGC | 4 cut(s) | 180, 320, 625, 758 |
| AspS9I | GGNCC | 4 cut(s) | 156, 544, 588, 902 |
| AsuC2I | CCSGG | 2 cut(s) | 695, 1218 |
| AsuHPI | GGTGA | 8 cut(s) | 317, 388, 715, 755, 925, 974, 1045, 1583 |
| AvaI | CYCGRG | 1 cut(s) | 1129 |
| AvaII | GGWCC | 1 cut(s) | 544 |
| BanI | GGYRCC | 1 cut(s) | 755 |
| BanII | GRGCYC | 2 cut(s) | 478, 1464 |
| BbsI | GAAGAC | 1 cut(s) | 1208 |
| Bbv12I | GWGCWC | 4 cut(s) | 478, 666, 1136, 1321 |
| BbvCI | CCTCAGC | 1 cut(s) | 356 |
| BccI | CCATC | 5 cut(s) | 107, 299, 820, 824, 877 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 659, 693 |
| BciT130I | CCWGG | 2 cut(s) | 154, 258 |
| BclI | TGATCA | 3 cut(s) | 615, 1192, 1347 |
| BcnI | CCSGG | 2 cut(s) | 695, 1218 |
| BcoDI | GTCTC | 3 cut(s) | 70, 641, 1518 |
| BfoI | RGCGCY | 3 cut(s) | 181, 626, 759 |
| BglII | AGATCT | 1 cut(s) | 21 |
| BisI | GCNGC | 1 cut(s) | 11 |
| BlsI | GCNGC | 1 cut(s) | 12 |
| Bme1390I | CCNGG | 4 cut(s) | 154, 258, 695, 1218 |
| Bme18I | GGWCC | 1 cut(s) | 544 |
| BmeT110I | CYCGRG | 1 cut(s) | 1129 |
| BmgT120I | GGNCC | 4 cut(s) | 156, 544, 588, 902 |
| BmiI | GGNNCC | 1 cut(s) | 757 |
| BmrFI | CCNGG | 4 cut(s) | 154, 258, 695, 1218 |
| BmsI | GCATC | 5 cut(s) | 378, 793, 805, 850, 1395 |
| BpiI | GAAGAC | 1 cut(s) | 1208 |
| Bpu10I | CCTNAGC | 1 cut(s) | 356 |
| BpuEI | CTTGAG | 2 cut(s) | 641, 1492 |
| BpuMI | CCSGG | 2 cut(s) | 695, 1218 |
| BsaHI | GRCGYC | 3 cut(s) | 163, 417, 756 |
| BsaJI | CCNNGG | 2 cut(s) | 152, 256 |
| BsaWI | WCCGGW | 1 cut(s) | 799 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 717, 747 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 470, 683, 700, 910 |
| Bse1I | ACTGG | 1 cut(s) | 1151 |
| Bse3DI | GCAATG | 2 cut(s) | 687, 1518 |
| BseAI | TCCGGA | 1 cut(s) | 799 |
| BseBI | CCWGG | 2 cut(s) | 154, 258 |
| BseDI | CCNNGG | 2 cut(s) | 152, 256 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 470, 683, 700, 910 |
| BseMI | GCAATG | 2 cut(s) | 687, 1518 |
| BseMII | CTCAG | 3 cut(s) | 39, 363, 370 |
| BseNI | ACTGG | 1 cut(s) | 1151 |
| BseRI | GAGGAG | 4 cut(s) | 107, 335, 1394, 1415 |
| BsgI | GTGCAG | 1 cut(s) | 636 |
| Bsh1236I | CGCG | 2 cut(s) | 318, 739 |
| BshFI | GGCC | 3 cut(s) | 157, 589, 903 |
| BshNI | GGYRCC | 1 cut(s) | 755 |
| BsiHKAI | GWGCWC | 4 cut(s) | 478, 666, 1136, 1321 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1129 |
| BsiSI | CCGG | 5 cut(s) | 46, 366, 695, 800, 1218 |
| BslFI | GGGAC | 4 cut(s) | 414, 478, 677, 1263 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 470, 683, 700, 910 |
| BsmAI | GTCTC | 3 cut(s) | 70, 641, 1518 |
| BsmBI | CGTCTC | 1 cut(s) | 70 |
| BsmFI | GGGAC | 4 cut(s) | 414, 478, 677, 1263 |
| BsmI | GAATGC | 1 cut(s) | 1330 |
| BsnI | GGCC | 3 cut(s) | 157, 589, 903 |
| BsoBI | CYCGRG | 1 cut(s) | 1129 |
| Bsp1286I | GDGCHC | 5 cut(s) | 478, 666, 1136, 1321, 1464 |
| Bsp13I | TCCGGA | 1 cut(s) | 799 |
| Bsp143I | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| Bsp68I | TCGCGA | 1 cut(s) | 739 |
| BspACI | CCGC | 8 cut(s) | 37, 81, 87, 301, 316, 341, 968, 1247 |
| BspANI | GGCC | 3 cut(s) | 157, 589, 903 |
| BspCNI | CTCAG | 3 cut(s) | 38, 362, 369 |
| BspEI | TCCGGA | 1 cut(s) | 799 |
| BspFNI | CGCG | 2 cut(s) | 318, 739 |
| BspHI | TCATGA | 2 cut(s) | 1051, 1224 |
| BspLI | GGNNCC | 1 cut(s) | 757 |
| BspT107I | GGYRCC | 1 cut(s) | 755 |
| BsrBI | CCGCTC | 1 cut(s) | 343 |
| BsrDI | GCAATG | 2 cut(s) | 687, 1518 |
| BsrI | ACTGG | 1 cut(s) | 1151 |
| BssECI | CCNNGG | 2 cut(s) | 152, 256 |
| BssMI | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| BssNI | GRCGYC | 3 cut(s) | 163, 417, 756 |
| Bst2UI | CCWGG | 2 cut(s) | 154, 258 |
| Bst4CI | ACNGT | 7 cut(s) | 64, 109, 133, 718, 1073, 1188, 1254 |
| Bst6I | CTCTTC | 1 cut(s) | 1082 |
| BstACI | GRCGYC | 3 cut(s) | 163, 417, 756 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 375 |
| BstC8I | GCNNGC | 2 cut(s) | 678, 1136 |
| BstDEI | CTNAG | 4 cut(s) | 25, 349, 356, 1560 |
| BstFNI | CGCG | 2 cut(s) | 318, 739 |
| BstH2I | RGCGCY | 3 cut(s) | 181, 626, 759 |
| BstHHI | GCGC | 4 cut(s) | 180, 320, 625, 758 |
| BstKTI | GATC | 5 cut(s) | 24, 115, 618, 1195, 1350 |
| BstMAI | GTCTC | 3 cut(s) | 70, 641, 1518 |
| BstMBI | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 10, 366, 375, 414, 1325 |
| BstNI | CCWGG | 2 cut(s) | 154, 258 |
| BstNSI | RCATGY | 2 cut(s) | 1240, 1450 |
| BstSCI | CCNGG | 4 cut(s) | 152, 256, 693, 1216 |
| BstUI | CGCG | 2 cut(s) | 318, 739 |
| BstV2I | GAAGAC | 1 cut(s) | 1208 |
| BstX2I | RGATCY | 1 cut(s) | 21 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 536, 826 |
| BstYI | RGATCY | 1 cut(s) | 21 |
| BsuRI | GGCC | 3 cut(s) | 157, 589, 903 |
| BtuMI | TCGCGA | 1 cut(s) | 739 |
| Cac8I | GCNNGC | 2 cut(s) | 678, 1136 |
| CciI | TCATGA | 2 cut(s) | 1051, 1224 |
| CfoI | GCGC | 4 cut(s) | 180, 320, 625, 758 |
| Cfr13I | GGNCC | 4 cut(s) | 156, 544, 588, 902 |
| CseI | GACGC | 3 cut(s) | 2, 171, 406 |
| Csp6I | GTAC | 2 cut(s) | 1007, 1231 |
| CviAII | CATG | 8 cut(s) | 7, 530, 874, 1052, 1225, 1237, 1300, 1447 |
| CviQI | GTAC | 2 cut(s) | 1007, 1231 |
| DdeI | CTNAG | 4 cut(s) | 25, 349, 356, 1560 |
| DinI | GGCGCC | 1 cut(s) | 757 |
| DpnI | GATC | 5 cut(s) | 23, 114, 617, 1194, 1349 |
| DpnII | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| DraI | TTTAAA | 1 cut(s) | 559 |
| DraIII | CACNNNGTG | 1 cut(s) | 553 |
| Eam1104I | CTCTTC | 1 cut(s) | 1082 |
| EarI | CTCTTC | 1 cut(s) | 1082 |
| EciI | GGCGGA | 3 cut(s) | 26, 70, 76 |
| Ecl136II | GAGCTC | 1 cut(s) | 476 |
| Eco24I | GRGCYC | 2 cut(s) | 478, 1464 |
| Eco47I | GGWCC | 1 cut(s) | 544 |
| Eco47III | AGCGCT | 1 cut(s) | 624 |
| Eco53kI | GAGCTC | 1 cut(s) | 476 |
| Eco57I | CTGAAG | 1 cut(s) | 38 |
| Eco88I | CYCGRG | 1 cut(s) | 1129 |
| EcoICRI | GAGCTC | 1 cut(s) | 476 |
| EcoRII | CCWGG | 2 cut(s) | 152, 256 |
| EcoT38I | GRGCYC | 2 cut(s) | 478, 1464 |
| EgeI | GGCGCC | 1 cut(s) | 757 |
| EheI | GGCGCC | 1 cut(s) | 757 |
| Esp3I | CGTCTC | 1 cut(s) | 70 |
| FaeI | CATG | 8 cut(s) | 10, 533, 877, 1055, 1228, 1240, 1303, 1450 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 425, 457 |
| FaqI | GGGAC | 4 cut(s) | 414, 478, 677, 1263 |
| FatI | CATG | 8 cut(s) | 6, 529, 873, 1051, 1224, 1236, 1299, 1446 |
| FauI | CCCGC | 3 cut(s) | 323, 348, 1240 |
| FbaI | TGATCA | 3 cut(s) | 615, 1192, 1347 |
| FblI | GTMKAC | 1 cut(s) | 1436 |
| Fnu4HI | GCNGC | 1 cut(s) | 11 |
| FriOI | GRGCYC | 2 cut(s) | 478, 1464 |
| Fsp4HI | GCNGC | 1 cut(s) | 11 |
| GlaI | GCGC | 4 cut(s) | 179, 319, 624, 757 |
| GluI | GCNGC | 1 cut(s) | 11 |
| HaeII | RGCGCY | 3 cut(s) | 181, 626, 759 |
| HaeIII | GGCC | 3 cut(s) | 157, 589, 903 |
| HapII | CCGG | 5 cut(s) | 46, 366, 695, 800, 1218 |
| HgaI | GACGC | 3 cut(s) | 2, 171, 406 |
| HhaI | GCGC | 4 cut(s) | 180, 320, 625, 758 |
| Hin1I | GRCGYC | 3 cut(s) | 163, 417, 756 |
| Hin1II | CATG | 8 cut(s) | 10, 533, 877, 1055, 1228, 1240, 1303, 1450 |
| Hin6I | GCGC | 4 cut(s) | 178, 318, 623, 756 |
| HinP1I | GCGC | 4 cut(s) | 178, 318, 623, 756 |
| HindIII | AAGCTT | 1 cut(s) | 936 |
| HinfI | GANTC | 2 cut(s) | 122, 1213 |
| HpaII | CCGG | 5 cut(s) | 46, 366, 695, 800, 1218 |
| HphI | GGTGA | 8 cut(s) | 317, 388, 715, 755, 925, 974, 1045, 1583 |
| Hpy166II | GTNNAC | 4 cut(s) | 547, 600, 1424, 1437 |
| Hpy188I | TCNGA | 5 cut(s) | 18, 352, 382, 525, 1323 |
| Hpy188III | TCNNGA | 6 cut(s) | 445, 738, 800, 1052, 1129, 1225 |
| Hpy8I | GTNNAC | 4 cut(s) | 547, 600, 1424, 1437 |
| Hpy99I | CGWCG | 2 cut(s) | 113, 671 |
| HpyAV | CCTTC | 8 cut(s) | 79, 105, 451, 460, 862, 1049, 1054, 1471 |
| HpyCH4III | ACNGT | 7 cut(s) | 64, 109, 133, 718, 1073, 1188, 1254 |
| HpyCH4IV | ACGT | 2 cut(s) | 594, 1229 |
| HpyCH4V | TGCA | 4 cut(s) | 653, 680, 1110, 1124 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 10, 366, 375, 414, 1325 |
| HpyF3I | CTNAG | 4 cut(s) | 25, 349, 356, 1560 |
| HpySE526I | ACGT | 2 cut(s) | 594, 1229 |
| Hsp92I | GRCGYC | 3 cut(s) | 163, 417, 756 |
| Hsp92II | CATG | 8 cut(s) | 10, 533, 877, 1055, 1228, 1240, 1303, 1450 |
| HspAI | GCGC | 4 cut(s) | 178, 318, 623, 756 |
| KasI | GGCGCC | 1 cut(s) | 755 |
| Kpn2I | TCCGGA | 1 cut(s) | 799 |
| Ksp22I | TGATCA | 3 cut(s) | 615, 1192, 1347 |
| Kzo9I | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| LmnI | GCTCC | 5 cut(s) | 348, 473, 1267, 1324, 1589 |
| LweI | GCATC | 5 cut(s) | 378, 793, 805, 850, 1395 |
| MaeII | ACGT | 2 cut(s) | 594, 1229 |
| MaeIII | GTNAC | 5 cut(s) | 133, 703, 913, 1466, 1489 |
| MalI | GATC | 5 cut(s) | 23, 114, 617, 1194, 1349 |
| MbiI | CCGCTC | 1 cut(s) | 343 |
| MboI | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| MboII | GAAGA | 6 cut(s) | 31, 223, 1099, 1111, 1213, 1493 |
| MfeI | CAATTG | 1 cut(s) | 1105 |
| MflI | RGATCY | 1 cut(s) | 21 |
| MhlI | GDGCHC | 5 cut(s) | 478, 666, 1136, 1321, 1464 |
| MluCI | AATT | 8 cut(s) | 248, 409, 562, 973, 1079, 1105, 1365, 1624 |
| Mly113I | GGCGCC | 1 cut(s) | 756 |
| MlyI | GAGTC | 1 cut(s) | 116 |
| MroI | TCCGGA | 1 cut(s) | 799 |
| MseI | TTAA | 5 cut(s) | 558, 840, 972, 981, 1623 |
| MslI | CAYNNNNRTG | 4 cut(s) | 534, 801, 824, 1496 |
| MspI | CCGG | 5 cut(s) | 46, 366, 695, 800, 1218 |
| MspR9I | CCNGG | 4 cut(s) | 154, 258, 695, 1218 |
| MunI | CAATTG | 1 cut(s) | 1105 |
| Mva1269I | GAATGC | 1 cut(s) | 1330 |
| MvaI | CCWGG | 2 cut(s) | 154, 258 |
| MvnI | CGCG | 2 cut(s) | 318, 739 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 10, 366, 375, 414, 1325 |
| NarI | GGCGCC | 1 cut(s) | 756 |
| NciI | CCSGG | 2 cut(s) | 695, 1218 |
| NdeII | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| NlaIII | CATG | 8 cut(s) | 10, 533, 877, 1055, 1228, 1240, 1303, 1450 |
| NlaIV | GGNNCC | 1 cut(s) | 757 |
| NmuCI | GTSAC | 5 cut(s) | 133, 703, 913, 1466, 1489 |
| NruI | TCGCGA | 1 cut(s) | 739 |
| NspI | RCATGY | 2 cut(s) | 1240, 1450 |
| OliI | CACNNNNGTG | 1 cut(s) | 1496 |
| PaeR7I | CTCGAG | 1 cut(s) | 1129 |
| PagI | TCATGA | 2 cut(s) | 1051, 1224 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 117 |
| PctI | GAATGC | 1 cut(s) | 1330 |
| PfeI | GAWTC | 1 cut(s) | 1213 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 470 |
| PfoI | TCCNGGA | 1 cut(s) | 693 |
| PkrI | GCNGC | 1 cut(s) | 12 |
| PleI | GAGTC | 1 cut(s) | 116 |
| PluTI | GGCGCC | 1 cut(s) | 759 |
| PpsI | GAGTC | 1 cut(s) | 116 |
| Psp124BI | GAGCTC | 1 cut(s) | 478 |
| Psp6I | CCWGG | 2 cut(s) | 152, 256 |
| PspGI | CCWGG | 2 cut(s) | 152, 256 |
| PspN4I | GGNNCC | 1 cut(s) | 757 |
| PspPI | GGNCC | 4 cut(s) | 156, 544, 588, 902 |
| PsuI | RGATCY | 1 cut(s) | 21 |
| RruI | TCGCGA | 1 cut(s) | 739 |
| RsaI | GTAC | 2 cut(s) | 1008, 1232 |
| RsaNI | GTAC | 2 cut(s) | 1007, 1231 |
| RseI | CAYNNNNRTG | 4 cut(s) | 534, 801, 824, 1496 |
| SacI | GAGCTC | 1 cut(s) | 478 |
| SaqAI | TTAA | 5 cut(s) | 558, 840, 972, 981, 1623 |
| SatI | GCNGC | 1 cut(s) | 11 |
| Sau3AI | GATC | 5 cut(s) | 21, 112, 615, 1192, 1347 |
| Sau96I | GGNCC | 4 cut(s) | 156, 544, 588, 902 |
| SchI | GAGTC | 1 cut(s) | 116 |
| ScrFI | CCNGG | 4 cut(s) | 154, 258, 695, 1218 |
| SduI | GDGCHC | 5 cut(s) | 478, 666, 1136, 1321, 1464 |
| SfaNI | GCATC | 5 cut(s) | 378, 793, 805, 850, 1395 |
| SfoI | GGCGCC | 1 cut(s) | 757 |
| Sfr274I | CTCGAG | 1 cut(s) | 1129 |
| SinI | GGWCC | 1 cut(s) | 544 |
| SlaI | CTCGAG | 1 cut(s) | 1129 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 534, 801, 824, 1496 |
| SmlI | CTYRAG | 3 cut(s) | 656, 1129, 1471 |
| SmoI | CTYRAG | 3 cut(s) | 656, 1129, 1471 |
| Sse9I | AATT | 8 cut(s) | 248, 409, 562, 973, 1079, 1105, 1365, 1624 |
| SsiI | CCGC | 8 cut(s) | 37, 81, 87, 301, 316, 341, 968, 1247 |
| SspDI | GGCGCC | 1 cut(s) | 755 |
| SstI | GAGCTC | 1 cut(s) | 478 |
| StyD4I | CCNGG | 4 cut(s) | 152, 256, 693, 1216 |
| TaaI | ACNGT | 7 cut(s) | 64, 109, 133, 718, 1073, 1188, 1254 |
| TaiI | ACGT | 2 cut(s) | 597, 1232 |
| TaqI | TCGA | 8 cut(s) | 111, 120, 147, 213, 336, 456, 666, 1130 |
| TasI | AATT | 8 cut(s) | 248, 409, 562, 973, 1079, 1105, 1365, 1624 |
| TfiI | GAWTC | 1 cut(s) | 1213 |
| Tru1I | TTAA | 5 cut(s) | 558, 840, 972, 981, 1623 |
| Tru9I | TTAA | 5 cut(s) | 558, 840, 972, 981, 1623 |
| TseFI | GTSAC | 5 cut(s) | 133, 703, 913, 1466, 1489 |
| TseI | GCWGC | 1 cut(s) | 10 |
| Tsp45I | GTSAC | 5 cut(s) | 133, 703, 913, 1466, 1489 |
| TspDTI | ATGAA | 4 cut(s) | 382, 1068, 1494, 1500 |
| TspGWI | ACGGA | 2 cut(s) | 541, 1220 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 470 |
| VpaK11BI | GGWCC | 1 cut(s) | 544 |
| XapI | RAATTY | 1 cut(s) | 248 |
| XceI | RCATGY | 2 cut(s) | 1240, 1450 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 150 |
| XhoI | CTCGAG | 1 cut(s) | 1129 |
| XmiI | GTMKAC | 1 cut(s) | 1436 |