Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0000530

Physical Location & Seq

Genomic Coordinates Forward (+)

23997415 .. 23999019

Gene Structure 1605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG145300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGCTGCTGCGCCGGAACCTCTCCCTCAAACCCTTCTCTCTCCTCCACTCAATCACCGCCGTTCCCTTCTCCACCTCCACCTCCGCCGTCGATTTCCTCCACTCCTACACCGTCACCCCTCCAATCCAAGACTGGCCCCACCACCTCCACCCAAAGCGCCTCATCTCCCTCATCACCCGCGAGCCCAAACTCGACCTCGCCCTCCAAATCTTCCACCACGCCTCCAAATACCACCCCGGATTCCACCATAACTACCACACCTACCACGCTATCATCCGCCGCCTCCTCCGCTTCCGCGCTTTTCACCTCATCGACCCCCTCCTCTCCGACCTCCGCGCCTCCAATCTCCGATGCAGCGAAGACCTCTTCATCTCCCTAATCCGCAACTACGGCGTCGTTTCACGCCCCAAACTCGCATTCAAGACATTTATCACCATTCCGAAATTCGGCGTCAAGCGATCCGTGAGGTCCTTGAATGCTTTGCTGAACGCTTTGGTTCAGAATCACGAGTGCAGATTGGTTCACTCGGTGTTTCGGAACTGTAGGGAGAGGTTCGGGGTGGCGCCGAATGTGTTTAGTTGTAATATATTGATCAAAGCACTGTGCAAGAGAAATGATTTGGAGACTGCACACCAGGTGCTCGACGAAATGCCTGCGATGGGATTTGTGCCCAATGTGGTGACTTTTACTACCATTTTGGGTGGTTATGTGTCGCGGCGCGATATGGTTGGTGCCAAGAGGGTGTTTGGTGAGATTTTGGACAGAGGGTGGTTTCCTGATGTGACTACATATACTATATTGATGGATGGGTATGTGAAGCAGGGGAAGCTGGCTGAGGCTATTAAGGTCATGGATGAGATGGAGGATAATGGGGTTGGCGCCAATGAGGTTACGTATGGGGTTATGATTGAAGCTTATTGTAAGGAGAAGAAGTCGGGTGAAGCGGTTAATTTGCTTGATGATATGGTGCAGAAGAGGTATATACCGAGCTCGGCGCTCTGTTGTAAGGTGATTGATGTGTTGTGTTGCGAAGGGAAGGTGGAGGATGCTTGTGTACTGTGGAAGAGGCTTTTGAAGAAGAATTGCAGGCCGGATAATGCCGTATTGGGCACACTCATATACTGGCTTTGTAAGAAGGGAGAAGTGTGGGAAGCCAGGAAATTGTTTGATCAGTTTGAGACGAGTGAGCCTCCGGACGTCATGACTTACAACGTGCTTATTTCTGGAATGTGTGAAGTGGCGGAGTTGTGTGAGGCAGGGAGGTTATGGGATGACATGGTGGAGAAAGGATATTCTCCGAATTCATTTACATATAATGTATTGATCAAGGGATTCTGTAAGATTGGAAAAGCAAAGGAGGGAATTAGGATTTTGGACGAGATATTCGAAAAAGGCTGTTTGCCAAACAAGTCTACTTATGCTATGTTGATTGAGGGGCTCTGTGATTCAGGAGAGGAAGCTGAAATCACTACAGTAATATCTATGGCAATGTCAAGTGGACACATTGACAGTGATTCCTGGGAGCTTTTCCTTACAAAGGTTATTGGTGATTTGGATTCTGGGGAAAGTGTTCTAAACAGAATACTGCTGGAGAATGCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

534

Amino Acids

60.43

Weight (kDa)

7.22

Isoelectric Point (pI)

39.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	177 - 238	9e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	186 - 217	2.9e-08	PPR repeat
PPR_2	PF13041	189 - 237	9.8e-15	PPR repeat family
PPR_2	PF13041	224 - 273	5.6e-13	PPR repeat family
PPR_3	PF13812	248 - 308	2.8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	256 - 288	1.9e-09	PPR repeat
PPR_2	PF13041	259 - 308	1.3e-16	PPR repeat family
PPR	PF01535	263 - 292	5.1e-08	PPR repeat
PPR_1	PF12854	291 - 323	2.4e-06	PPR repeat
PPR_2	PF13041	295 - 331	5.3e-07	PPR repeat family
PPR	PF01535	297 - 325	4.4e-06	PPR repeat
PPR_1	PF12854	398 - 427	7.9e-06	PPR repeat
PPR_2	PF13041	398 - 447	4.2e-18	PPR repeat family
PPR_3	PF13812	421 - 478	8.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	429 - 460	3.2e-09	PPR repeat
PPR_2	PF13041	436 - 482	6.9e-13	PPR repeat family
PPR	PF01535	436 - 466	2.3e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16420 AT5G16420 AT5G16420 AT5G16420
fragaria_vesca	FvH4_7g08341 FvH4_7g08360
malus_domestica	MD02G1232100.v1.1 MD07G1081300.v1.1
prunus_persica	Prupe.2G106500_v2.0.a1
pyrus_communis	pycom02g20040
rosa_chinensis	RchiOBHm_Chr1g0340331 RchiOBHm_Chr1g0340431 RchiOBHm_Chr1g0340441 RchiOBHm_Chr1g0340491 RchiOBHm_Chr1g0340531 RchiOBHm_Chr1g0340541 RchiOBHm_Chr1g0340561 RchiOBHm_Chr1g0340621 RchiOBHm_Chr1g0340661 RchiOBHm_Chr1g0340691
rosa_laevigata	RLG00000029013 RLG00000029018 RLG00000029020 RLG00000029024 RLG00000029026 RLG00000029029 RLG00000029030 RLG00000029032 RLG00000029033
rosa_multiflora	Rmu_sc0000566.1_g000026 Rmu_sc0000566.1_g000034 Rmu_sc0000566.1_g000054 Rmu_sc0001836.1_g000016 Rmu_sc0001836.1_g000022 Rmu_sc0001836.1_g000023 Rmu_sc0001836.1_g000028 Rmu_sc0001836.1_g000058 Rmu_sc0001946.1_g000004 Rmu_sc0002595.1_g000001 Rmu_sc0002595.1_g000005 Rmu_sc0005167.1_g000003 Rmu_sc0005167.1_g000009 Rmu_sc0005167.1_g000018 Rmu_sc0024761.1_g000004
rosa_roxburghii	Rroxscaffold_4G00311170 Rroxscaffold_4G00311190 Rroxscaffold_4G00311250 Rroxscaffold_4G00315930 Rroxscaffold_4G00315960 Rroxscaffold_5G00353270
rosa_rugosa	Rorug01G0162000.1 Rorug01G0162500.1 Rorug01G0162800.1 Rorug01G0163000.1 Rorug01G0163400.1 Rorug01G0163700.1 Rorug01G0164100.1 Rorug01G0164300 Rorug05G0484800
rosa_samantha	Rh1AG177800 Rh1AG178000 Rh1AG178300 Rh1AG178600 Rh1AG178900 Rh1BG145300 Rh1BG145600 Rh1BG145800 Rh1BG145900 Rh1BG146000 Rh1BG146700 Rh1CG165100 Rh1CG165200 Rh1CG165400 Rh1CG165600 Rh1CG165700 Rh1CG165900 Rh1DG177500 Rh1DG177600 Rh1DG177800 Rh1DG177900 Rh1DG178000 Rh1DG178800
rosa_wichuraiana	Rw0G006210 Rw1G014800 Rw1G014890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1200
AccB1I	GGYRCC	3 cut(s)	562, 731, 878
AccI	GTMKAC	1 cut(s)	1412
AccII	CGCG	5 cut(s)	180, 297, 336, 715, 720
AccIII	TCCGGA	1 cut(s)	1192
AclWI	GGATC	1 cut(s)	453
AcsI	RAATTY	2 cut(s)	443, 1300
AcyI	GRCGYC	5 cut(s)	393, 450, 563, 879, 1197
AdeI	CACNNNGTG	2 cut(s)	529, 637
AfaI	GTAC	1 cut(s)	1056
AfiI	CCNNNNNNNGG	3 cut(s)	446, 659, 1537
AgsI	TTSAA	4 cut(s)	421, 475, 911, 1075
AjnI	CCWGG	3 cut(s)	633, 1154, 1517
AjuI	GAANNNNNNNTTGG	2 cut(s)	401, 433
AluBI	AGCT	5 cut(s)	829, 914, 990, 1460, 1525
AluI	AGCT	5 cut(s)	829, 914, 990, 1460, 1525
Alw21I	GWGCWC	2 cut(s)	642, 992
Alw26I	GTCTC	2 cut(s)	617, 1172
AlwI	GGATC	1 cut(s)	453
Aor13HI	TCCGGA	1 cut(s)	1192
AoxI	GGCC	2 cut(s)	134, 1088
ApeKI	GCWGC	3 cut(s)	4, 7, 354
ApoI	RAATTY	2 cut(s)	443, 1300
ArsI	GACNNNNNNTTYG	2 cut(s)	1367, 1399
Asp700I	GAANNNNTTC	1 cut(s)	1569
AspLEI	GCGC	8 cut(s)	12, 159, 299, 338, 565, 720, 881, 997
AspS9I	GGNCC	2 cut(s)	135, 468
AsuC2I	CCSGG	1 cut(s)	237
AsuII	TTCGAA	1 cut(s)	1386
AvaII	GGWCC	1 cut(s)	468
BaeGI	GKGCMC	2 cut(s)	672, 1112
BanI	GGYRCC	3 cut(s)	562, 731, 878
BanII	GRGCYC	3 cut(s)	186, 992, 1440
BauI	CACGAG	1 cut(s)	506
BbsI	GAAGAC	1 cut(s)	366
Bbv12I	GWGCWC	2 cut(s)	642, 992
BbvCI	CCTCAGC	1 cut(s)	834
BbvI	GCAGC	1 cut(s)	366
BccI	CCATC	4 cut(s)	652, 796, 800, 853
BceAI	ACGGC	4 cut(s)	44, 71, 406, 1085
BcgI	CGANNNNNNTGC	2 cut(s)	635, 669
BciT130I	CCWGG	3 cut(s)	635, 1156, 1519
BclI	TGATCA	3 cut(s)	591, 1168, 1323
BcnI	CCSGG	1 cut(s)	237
BcoDI	GTCTC	2 cut(s)	617, 1172
BfmI	CTRYAG	2 cut(s)	541, 1470
BfoI	RGCGCY	4 cut(s)	160, 566, 882, 998
BisI	GCNGC	5 cut(s)	5, 8, 280, 355, 716
BlsI	GCNGC	5 cut(s)	6, 9, 281, 356, 717
Bme1390I	CCNGG	4 cut(s)	237, 635, 1156, 1519
Bme18I	GGWCC	1 cut(s)	468
BmgT120I	GGNCC	2 cut(s)	135, 468
BmiI	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
BmrFI	CCNGG	4 cut(s)	237, 635, 1156, 1519
BmsI	GCATC	2 cut(s)	341, 1036
BpiI	GAAGAC	1 cut(s)	366
BplI	GAGNNNNNCTC	2 cut(s)	1174, 1206
Bpu10I	CCTNAGC	1 cut(s)	834
Bpu14I	TTCGAA	1 cut(s)	1386
BpuMI	CCSGG	1 cut(s)	237
BsaAI	YACGTR	1 cut(s)	894
BsaHI	GRCGYC	5 cut(s)	393, 450, 563, 879, 1197
BsaJI	CCNNGG	2 cut(s)	235, 1518
BsaWI	WCCGGW	1 cut(s)	1192
BsaXI	ACNNNNNCTCC	4 cut(s)	206, 236, 917, 947
Bsc4I	CCNNNNNNNGG	3 cut(s)	446, 659, 1537
Bse1I	ACTGG	2 cut(s)	137, 1127
Bse3DI	GCAATG	1 cut(s)	1494
BseAI	TCCGGA	1 cut(s)	1192
BseBI	CCWGG	3 cut(s)	635, 1156, 1519
BseDI	CCNNGG	2 cut(s)	235, 1518
BseGI	GGATG	5 cut(s)	273, 811, 859, 1051, 1276
BseLI	CCNNNNNNNGG	3 cut(s)	446, 659, 1537
BseMI	GCAATG	1 cut(s)	1494
BseMII	CTCAG	1 cut(s)	825
BseNI	ACTGG	2 cut(s)	137, 1127
BseRI	GAGGAG	3 cut(s)	32, 275, 311
BseSI	GKGCMC	2 cut(s)	672, 1112
BseXI	GCAGC	1 cut(s)	366
BsgI	GTGCAG	3 cut(s)	532, 612, 989
Bsh1236I	CGCG	5 cut(s)	180, 297, 336, 715, 720
BshFI	GGCC	2 cut(s)	136, 1090
BshNI	GGYRCC	3 cut(s)	562, 731, 878
BsiHKAI	GWGCWC	2 cut(s)	642, 992
BsiSI	CCGG	4 cut(s)	13, 237, 1091, 1193
BslI	CCNNNNNNNGG	3 cut(s)	446, 659, 1537
BsmAI	GTCTC	2 cut(s)	617, 1172
BsmBI	CGTCTC	1 cut(s)	1172
BsmI	GAATGC	3 cut(s)	416, 481, 1600
BsnI	GGCC	2 cut(s)	136, 1090
Bsp119I	TTCGAA	1 cut(s)	1386
Bsp1286I	GDGCHC	6 cut(s)	186, 642, 672, 992, 1112, 1440
Bsp13I	TCCGGA	1 cut(s)	1192
Bsp143I	GATC	4 cut(s)	458, 591, 1168, 1323
BspANI	GGCC	2 cut(s)	136, 1090
BspCNI	CTCAG	1 cut(s)	826
BspEI	TCCGGA	1 cut(s)	1192
BspFNI	CGCG	5 cut(s)	180, 297, 336, 715, 720
BspHI	TCATGA	1 cut(s)	1200
BspLI	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
BspPI	GGATC	1 cut(s)	453
BspT104I	TTCGAA	1 cut(s)	1386
BspT107I	GGYRCC	3 cut(s)	562, 731, 878
BsrDI	GCAATG	1 cut(s)	1494
BsrI	ACTGG	2 cut(s)	137, 1127
BssECI	CCNNGG	2 cut(s)	235, 1518
BssMI	GATC	4 cut(s)	458, 591, 1168, 1323
BssNI	GRCGYC	5 cut(s)	393, 450, 563, 879, 1197
BssSI	CACGAG	1 cut(s)	506
Bst2BI	CACGAG	1 cut(s)	506
Bst2UI	CCWGG	3 cut(s)	635, 1156, 1519
Bst4CI	ACNGT	6 cut(s)	112, 542, 603, 1059, 1474, 1511
Bst6I	CTCTTC	3 cut(s)	371, 968, 1058
BstACI	GRCGYC	5 cut(s)	393, 450, 563, 879, 1197
BstBAI	YACGTR	1 cut(s)	894
BstBI	TTCGAA	1 cut(s)	1386
BstC8I	GCNNGC	4 cut(s)	182, 654, 831, 1088
BstDEI	CTNAG	1 cut(s)	834
BstENI	CCTNNNNNAGG	1 cut(s)	1535
BstF5I	GGATG	5 cut(s)	273, 811, 859, 1051, 1276
BstFNI	CGCG	5 cut(s)	180, 297, 336, 715, 720
BstH2I	RGCGCY	4 cut(s)	160, 566, 882, 998
BstHHI	GCGC	8 cut(s)	12, 159, 299, 338, 565, 720, 881, 997
BstKTI	GATC	4 cut(s)	461, 594, 1171, 1326
BstMAI	GTCTC	2 cut(s)	617, 1172
BstMBI	GATC	4 cut(s)	458, 591, 1168, 1323
BstMWI	GCNNNNNNNGC	3 cut(s)	288, 390, 826
BstNI	CCWGG	3 cut(s)	635, 1156, 1519
BstSCI	CCNGG	4 cut(s)	235, 633, 1154, 1517
BstSFI	CTRYAG	2 cut(s)	541, 1470
BstSLI	GKGCMC	2 cut(s)	672, 1112
BstSNI	TACGTA	1 cut(s)	894
BstUI	CGCG	5 cut(s)	180, 297, 336, 715, 720
BstV1I	GCAGC	1 cut(s)	366
BstV2I	GAAGAC	1 cut(s)	366
BsuRI	GGCC	2 cut(s)	136, 1090
BtgZI	GCGATG	1 cut(s)	671
BtsCI	GGATG	5 cut(s)	273, 811, 859, 1051, 1276
BtsIMutI	CAGTG	2 cut(s)	599, 1516
Cac8I	GCNNGC	4 cut(s)	182, 654, 831, 1088
CciI	TCATGA	1 cut(s)	1200
CfoI	GCGC	8 cut(s)	12, 159, 299, 338, 565, 720, 881, 997
Cfr13I	GGNCC	2 cut(s)	135, 468
CseI	GACGC	2 cut(s)	382, 439
CsiI	ACCWGGT	1 cut(s)	633
Csp6I	GTAC	1 cut(s)	1055
CviAII	CATG	3 cut(s)	850, 1201, 1276
CviQI	GTAC	1 cut(s)	1055
DdeI	CTNAG	1 cut(s)	834
DinI	GGCGCC	2 cut(s)	564, 880
DpnI	GATC	4 cut(s)	460, 593, 1170, 1325
DpnII	GATC	4 cut(s)	458, 591, 1168, 1323
DraIII	CACNNNGTG	2 cut(s)	529, 637
Eam1104I	CTCTTC	3 cut(s)	371, 968, 1058
EarI	CTCTTC	3 cut(s)	371, 968, 1058
EciI	GGCGGA	3 cut(s)	73, 266, 1256
Ecl136II	GAGCTC	1 cut(s)	990
Eco105I	TACGTA	1 cut(s)	894
Eco24I	GRGCYC	3 cut(s)	186, 992, 1440
Eco47I	GGWCC	1 cut(s)	468
Eco53kI	GAGCTC	1 cut(s)	990
EcoICRI	GAGCTC	1 cut(s)	990
EcoNI	CCTNNNNNAGG	1 cut(s)	1535
EcoO109I	RGGNCCY	1 cut(s)	468
EcoRI	GAATTC	1 cut(s)	1300
EcoRII	CCWGG	3 cut(s)	633, 1154, 1517
EcoT38I	GRGCYC	3 cut(s)	186, 992, 1440
EgeI	GGCGCC	2 cut(s)	564, 880
EheI	GGCGCC	2 cut(s)	564, 880
Esp3I	CGTCTC	1 cut(s)	1172
FaeI	CATG	3 cut(s)	853, 1204, 1279
FatI	CATG	3 cut(s)	849, 1200, 1275
FauI	CCCGC	1 cut(s)	185
FbaI	TGATCA	3 cut(s)	591, 1168, 1323
FblI	GTMKAC	1 cut(s)	1412
Fnu4HI	GCNGC	5 cut(s)	5, 8, 280, 355, 716
FokI	GGATG	5 cut(s)	260, 818, 866, 1058, 1283
FriOI	GRGCYC	3 cut(s)	186, 992, 1440
Fsp4HI	GCNGC	5 cut(s)	5, 8, 280, 355, 716
GlaI	GCGC	8 cut(s)	11, 158, 298, 337, 564, 719, 880, 996
GluI	GCNGC	5 cut(s)	5, 8, 280, 355, 716
HaeII	RGCGCY	4 cut(s)	160, 566, 882, 998
HaeIII	GGCC	2 cut(s)	136, 1090
HapII	CCGG	4 cut(s)	13, 237, 1091, 1193
HgaI	GACGC	2 cut(s)	382, 439
HhaI	GCGC	8 cut(s)	12, 159, 299, 338, 565, 720, 881, 997
Hin1I	GRCGYC	5 cut(s)	393, 450, 563, 879, 1197
Hin1II	CATG	3 cut(s)	853, 1204, 1279
Hin6I	GCGC	8 cut(s)	10, 157, 297, 336, 563, 718, 879, 995
HinP1I	GCGC	8 cut(s)	10, 157, 297, 336, 563, 718, 879, 995
HindIII	AAGCTT	1 cut(s)	912
HinfI	GANTC	6 cut(s)	240, 502, 1332, 1445, 1514, 1556
HpaII	CCGG	4 cut(s)	13, 237, 1091, 1193
Hpy166II	GTNNAC	4 cut(s)	523, 1055, 1413, 1499
Hpy188I	TCNGA	6 cut(s)	328, 350, 441, 501, 537, 1299
Hpy188III	TCNNGA	7 cut(s)	421, 506, 776, 1193, 1201, 1224, 1449
Hpy8I	GTNNAC	4 cut(s)	523, 1055, 1413, 1499
Hpy99I	CGWCG	3 cut(s)	92, 398, 647
HpyAV	CCTTC	5 cut(s)	43, 76, 1025, 1030, 1129
HpyCH4III	ACNGT	6 cut(s)	112, 542, 603, 1059, 1474, 1511
HpyCH4IV	ACGT	3 cut(s)	893, 1197, 1212
HpyCH4V	TGCA	6 cut(s)	354, 513, 606, 629, 970, 1086
HpyF10VI	GCNNNNNNNGC	3 cut(s)	288, 390, 826
HpyF3I	CTNAG	1 cut(s)	834
HpySE526I	ACGT	3 cut(s)	893, 1197, 1212
Hsp92I	GRCGYC	5 cut(s)	393, 450, 563, 879, 1197
Hsp92II	CATG	3 cut(s)	853, 1204, 1279
HspAI	GCGC	8 cut(s)	10, 157, 297, 336, 563, 718, 879, 995
KasI	GGCGCC	2 cut(s)	562, 878
Kpn2I	TCCGGA	1 cut(s)	1192
Ksp22I	TGATCA	3 cut(s)	591, 1168, 1323
Kzo9I	GATC	4 cut(s)	458, 591, 1168, 1323
LmnI	GCTCC	1 cut(s)	1522
Lsp1109I	GCAGC	1 cut(s)	366
LweI	GCATC	2 cut(s)	341, 1036
MabI	ACCWGGT	1 cut(s)	633
MaeII	ACGT	3 cut(s)	893, 1197, 1212
MaeIII	GTNAC	4 cut(s)	112, 679, 781, 889
MalI	GATC	4 cut(s)	460, 593, 1170, 1325
MboI	GATC	4 cut(s)	458, 591, 1168, 1323
MboII	GAAGA	8 cut(s)	202, 358, 371, 940, 985, 1075, 1087, 1090
MhlI	GDGCHC	6 cut(s)	186, 642, 672, 992, 1112, 1440
MluCI	AATT	6 cut(s)	443, 949, 1081, 1160, 1300, 1362
Mly113I	GGCGCC	2 cut(s)	563, 879
MmeI	TCCRAC	1 cut(s)	351
MroI	TCCGGA	1 cut(s)	1192
MroXI	GAANNNNTTC	1 cut(s)	1569
MseI	TTAA	2 cut(s)	843, 948
MspI	CCGG	4 cut(s)	13, 237, 1091, 1193
MspR9I	CCNGG	4 cut(s)	237, 635, 1156, 1519
Mva1269I	GAATGC	3 cut(s)	416, 481, 1600
MvaI	CCWGG	3 cut(s)	635, 1156, 1519
MvnI	CGCG	5 cut(s)	180, 297, 336, 715, 720
MwoI	GCNNNNNNNGC	3 cut(s)	288, 390, 826
NarI	GGCGCC	2 cut(s)	563, 879
NciI	CCSGG	1 cut(s)	237
NdeII	GATC	4 cut(s)	458, 591, 1168, 1323
NlaIII	CATG	3 cut(s)	853, 1204, 1279
NlaIV	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
NmeAIII	GCCGAG	1 cut(s)	971
NmuCI	GTSAC	3 cut(s)	112, 679, 781
NspV	TTCGAA	1 cut(s)	1386
PagI	TCATGA	1 cut(s)	1200
PcsI	WCGNNNNNNNCGW	1 cut(s)	1383
PctI	GAATGC	3 cut(s)	416, 481, 1600
PdmI	GAANNNNTTC	1 cut(s)	1569
PfeI	GAWTC	6 cut(s)	240, 502, 1332, 1445, 1514, 1556
PkrI	GCNGC	5 cut(s)	6, 9, 281, 356, 717
PluTI	GGCGCC	2 cut(s)	566, 882
Ppu21I	YACGTR	1 cut(s)	894
PpuMI	RGGWCCY	1 cut(s)	468
Psp124BI	GAGCTC	1 cut(s)	992
Psp5II	RGGWCCY	1 cut(s)	468
Psp6I	CCWGG	3 cut(s)	633, 1154, 1517
PspGI	CCWGG	3 cut(s)	633, 1154, 1517
PspN4I	GGNNCC	5 cut(s)	17, 137, 564, 733, 880
PspPI	GGNCC	2 cut(s)	135, 468
PspPPI	RGGWCCY	1 cut(s)	468
RsaI	GTAC	1 cut(s)	1056
RsaNI	GTAC	1 cut(s)	1055
SacI	GAGCTC	1 cut(s)	992
SaqAI	TTAA	2 cut(s)	843, 948
SatI	GCNGC	5 cut(s)	5, 8, 280, 355, 716
Sau3AI	GATC	4 cut(s)	458, 591, 1168, 1323
Sau96I	GGNCC	2 cut(s)	135, 468
ScrFI	CCNGG	4 cut(s)	237, 635, 1156, 1519
SduI	GDGCHC	6 cut(s)	186, 642, 672, 992, 1112, 1440
SexAI	ACCWGGT	1 cut(s)	633
SfaNI	GCATC	2 cut(s)	341, 1036
SfcI	CTRYAG	2 cut(s)	541, 1470
SfoI	GGCGCC	2 cut(s)	564, 880
SfuI	TTCGAA	1 cut(s)	1386
SinI	GGWCC	1 cut(s)	468
SnaBI	TACGTA	1 cut(s)	894
Sse9I	AATT	6 cut(s)	443, 949, 1081, 1160, 1300, 1362
SspDI	GGCGCC	2 cut(s)	562, 878
SstI	GAGCTC	1 cut(s)	992
StyD4I	CCNGG	4 cut(s)	235, 633, 1154, 1517
TaaI	ACNGT	6 cut(s)	112, 542, 603, 1059, 1474, 1511
TaiI	ACGT	3 cut(s)	896, 1200, 1215
TaqI	TCGA	5 cut(s)	90, 192, 312, 642, 1386
TasI	AATT	6 cut(s)	443, 949, 1081, 1160, 1300, 1362
TatI	WGTACW	1 cut(s)	1054
TauI	GCSGC	2 cut(s)	282, 718
TfiI	GAWTC	6 cut(s)	240, 502, 1332, 1445, 1514, 1556
Tru1I	TTAA	2 cut(s)	843, 948
Tru9I	TTAA	2 cut(s)	843, 948
TscAI	CASTG	2 cut(s)	606, 1516
TseFI	GTSAC	3 cut(s)	112, 679, 781
TseI	GCWGC	3 cut(s)	4, 7, 354
Tsp45I	GTSAC	3 cut(s)	112, 679, 781
TspDTI	ATGAA	2 cut(s)	358, 1293
TspGWI	ACGGA	1 cut(s)	451
TspRI	CASTG	2 cut(s)	606, 1516
VpaK11BI	GGWCC	1 cut(s)	468
XagI	CCTNNNNNAGG	1 cut(s)	1535
XapI	RAATTY	2 cut(s)	443, 1300
XcmI	CCANNNNNNNNNTGG	1 cut(s)	129
XmiI	GTMKAC	1 cut(s)	1412
XmnI	GAANNNNTTC	1 cut(s)	1569
ZraI	GACGTC	1 cut(s)	1198

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.