Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0000530

Physical Location & Seq

Genomic Coordinates Forward (+)

24126490 .. 24127794

Gene Structure 1305 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG145900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1305 bp

ATGCTGCTTCGCCGGAACCTCTCCCCCAAACCCTTCTCTCTCCTCCACTCAATCACCGCTGTCCCCTTCTCCACCTCCACCTCCGCCGTCGATTTCCTCCACTCCTACACCGTCACCCCTCCGATCGAAAACTGGCCCCACCACCTCCACCCAAAGCGCCTCATCACCCGCGAGCCCAAACTCGACCTCGCCCTCCAAATCTTCCACCACGCCTCCAAATACCACCCCGGATTTCACCATAATCTCCGATGCAGCGAAGACCTCTTCATCTCCCTAATCCGCAACTACGGCGTCGCTTCACGCCCCAAACTCGCATTCAAGACATTTATCACCATTCCGAAATTCGGCGTCCAACGCTCCGTGAGGTCCTTGAATGCTTTGCTGAACGCTTTGGTTCAGAATCACGAGTATAGATTGGTTCACTCGGTGTTTCGGAACTGTAGGGAGAGGTTCGGGGTGGCGCCGAATGTGTTTAGTTGTAATATATTGATCAAAGCATTGTGCAAGAGAAATGATTTAGAGACTGCACACCAGGTGCTCGACGAAATGCCTGCGATGGGATTTGTGCCCAATGTAGTGACTTTTACTACCATCTTGGGTGGTTATGTGTCGCGGCGAGATATGGTTGGTGCCAAGAGGGTGTTTGGTGAGATTTTGGACAGAGGGTGGTTTCCTGATGTGACTACATATACTATATTGATGGATGGGTATGTGAAGCAGGGGAAGCTGGTTGAGGCTATTAAGGTCATGGATGAGATGGAGGATAATGGGATTGGCGCCAATGAGGTTACTTATGGGGTTATGATTGAAGCTTATTGTAAGGCAAAGAAGTCGGGCGAAGCGGCTAATTTGCTTGATGATATGGTGCAGAAGAGGTATATACCGAGCTCGGCGCTCTGTTGTAAGGTGATTGATGTGTTGTGTTGCGAAGGGAAGGTGGAGGATGCTTGTGTACTGTGGAAGAGGCTTTTGAAGAAGAATTGCACGCCGGATAATGCCGTATTGGGCACGCTCATATACTGGCTTTGTAAGAAGAGAGAAGTGTGGGAAGCCAGGAAATTGTTTGATCAGTTTGAGACAAGTGAGGCTCCGGATGTCATGACTTACAACGTGCTTATTTCTGGGATGTGTGAAGTGGGGGAGTTGTGTGAGGCAGGGAGGTTATGCGATGACATGGTGGAGAAAGGATGTTCTCCGAATTCTTTTACATATAATGTATTGATCAAAGATATTTTTCTTCGGGGAAGAAAGAAAAATTTGCCAAATCGGGGAAGAAAGAAGAATTTGCCAAATCGGGGAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

434

Amino Acids

49.26

Weight (kDa)

9.05

Isoelectric Point (pI)

35.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	143 - 204	6.7e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	152 - 183	2.3e-08	PPR repeat
PPR_2	PF13041	155 - 202	9.9e-15	PPR repeat family
PPR_2	PF13041	190 - 239	4.2e-13	PPR repeat family
PPR_3	PF13812	214 - 273	3.2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	222 - 254	4e-09	PPR repeat
PPR_2	PF13041	225 - 274	1.7e-16	PPR repeat family
PPR	PF01535	229 - 258	2e-08	PPR repeat
PPR_1	PF12854	257 - 289	5.3e-06	PPR repeat
PPR_2	PF13041	261 - 297	2.6e-06	PPR repeat family
PPR_2	PF13041	364 - 409	3.8e-16	PPR repeat family
PPR_1	PF12854	364 - 393	2.4e-07	PPR repeat
PPR_3	PF13812	364 - 409	2.1e-08	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16420 AT5G16420 AT5G16420 AT5G16420
fragaria_vesca	FvH4_7g08341 FvH4_7g08360
malus_domestica	MD02G1232100.v1.1 MD07G1081300.v1.1
prunus_persica	Prupe.2G106500_v2.0.a1
pyrus_communis	pycom02g20040
rosa_chinensis	RchiOBHm_Chr1g0340331 RchiOBHm_Chr1g0340431 RchiOBHm_Chr1g0340441 RchiOBHm_Chr1g0340491 RchiOBHm_Chr1g0340531 RchiOBHm_Chr1g0340541 RchiOBHm_Chr1g0340561 RchiOBHm_Chr1g0340621 RchiOBHm_Chr1g0340661 RchiOBHm_Chr1g0340691
rosa_laevigata	RLG00000029013 RLG00000029018 RLG00000029020 RLG00000029024 RLG00000029026 RLG00000029029 RLG00000029030 RLG00000029032 RLG00000029033
rosa_multiflora	Rmu_sc0000566.1_g000026 Rmu_sc0000566.1_g000034 Rmu_sc0000566.1_g000054 Rmu_sc0001836.1_g000016 Rmu_sc0001836.1_g000022 Rmu_sc0001836.1_g000023 Rmu_sc0001836.1_g000028 Rmu_sc0001836.1_g000058 Rmu_sc0001946.1_g000004 Rmu_sc0002595.1_g000001 Rmu_sc0002595.1_g000005 Rmu_sc0005167.1_g000003 Rmu_sc0005167.1_g000009 Rmu_sc0005167.1_g000018 Rmu_sc0024761.1_g000004
rosa_roxburghii	Rroxscaffold_4G00311170 Rroxscaffold_4G00311190 Rroxscaffold_4G00311250 Rroxscaffold_4G00315930 Rroxscaffold_4G00315960 Rroxscaffold_5G00353270
rosa_rugosa	Rorug01G0162000.1 Rorug01G0162500.1 Rorug01G0162800.1 Rorug01G0163000.1 Rorug01G0163400.1 Rorug01G0163700.1 Rorug01G0164100.1 Rorug01G0164300 Rorug05G0484800
rosa_samantha	Rh1AG177800 Rh1AG178000 Rh1AG178300 Rh1AG178600 Rh1AG178900 Rh1BG145300 Rh1BG145600 Rh1BG145800 Rh1BG145900 Rh1BG146000 Rh1BG146700 Rh1CG165100 Rh1CG165200 Rh1CG165400 Rh1CG165600 Rh1CG165700 Rh1CG165900 Rh1DG177500 Rh1DG177600 Rh1DG177800 Rh1DG177900 Rh1DG178000 Rh1DG178800
rosa_wichuraiana	Rw0G006210 Rw1G014800 Rw1G014890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	460, 629, 776
AccII	CGCG	2 cut(s)	171, 613
AccIII	TCCGGA	1 cut(s)	1090
AciI	CCGC	6 cut(s)	57, 84, 169, 280, 613, 842
AcsI	RAATTY	4 cut(s)	341, 1198, 1255, 1282
AcyI	GRCGYC	4 cut(s)	291, 348, 461, 777
AdeI	CACNNNGTG	2 cut(s)	427, 535
AfaI	GTAC	1 cut(s)	954
AfiI	CCNNNNNNNGG	4 cut(s)	344, 557, 1268, 1295
AgsI	TTSAA	4 cut(s)	319, 373, 809, 973
AjnI	CCWGG	2 cut(s)	531, 1052
AjuI	GAANNNNNNNTTGG	2 cut(s)	299, 331
AluBI	AGCT	3 cut(s)	727, 812, 888
AluI	AGCT	3 cut(s)	727, 812, 888
Alw21I	GWGCWC	2 cut(s)	540, 890
Alw26I	GTCTC	2 cut(s)	515, 1070
Aor13HI	TCCGGA	1 cut(s)	1090
AoxI	GGCC	1 cut(s)	134
ApeKI	GCWGC	2 cut(s)	4, 252
ApoI	RAATTY	4 cut(s)	341, 1198, 1255, 1282
AspLEI	GCGC	4 cut(s)	159, 463, 779, 895
AspS9I	GGNCC	2 cut(s)	135, 366
AsuC2I	CCSGG	1 cut(s)	228
AsuHPI	GGTGA	7 cut(s)	46, 106, 157, 227, 322, 659, 919
AvaII	GGWCC	1 cut(s)	366
BaeGI	GKGCMC	2 cut(s)	570, 1010
BanI	GGYRCC	3 cut(s)	460, 629, 776
BanII	GRGCYC	2 cut(s)	177, 890
BauI	CACGAG	1 cut(s)	404
BbsI	GAAGAC	1 cut(s)	264
Bbv12I	GWGCWC	2 cut(s)	540, 890
BbvI	GCAGC	1 cut(s)	264
BccI	CCATC	5 cut(s)	550, 599, 694, 698, 751
BceAI	ACGGC	3 cut(s)	71, 304, 983
BcgI	CGANNNNNNTGC	4 cut(s)	533, 567, 813, 847
BciT130I	CCWGG	2 cut(s)	533, 1054
BclI	TGATCA	3 cut(s)	489, 1066, 1221
BcnI	CCSGG	1 cut(s)	228
BcoDI	GTCTC	2 cut(s)	515, 1070
BfmI	CTRYAG	1 cut(s)	439
BfoI	RGCGCY	4 cut(s)	160, 464, 780, 896
BisI	GCNGC	4 cut(s)	5, 253, 614, 843
BlsI	GCNGC	4 cut(s)	6, 254, 615, 844
Bme1390I	CCNGG	3 cut(s)	228, 533, 1054
Bme18I	GGWCC	1 cut(s)	366
BmgT120I	GGNCC	2 cut(s)	135, 366
BmiI	GGNNCC	6 cut(s)	17, 137, 462, 631, 778, 1089
BmrFI	CCNGG	3 cut(s)	228, 533, 1054
BmsI	GCATC	2 cut(s)	239, 934
BpiI	GAAGAC	1 cut(s)	264
BpuMI	CCSGG	1 cut(s)	228
BsaHI	GRCGYC	4 cut(s)	291, 348, 461, 777
BsaJI	CCNNGG	1 cut(s)	226
BsaWI	WCCGGW	1 cut(s)	1090
BsaXI	ACNNNNNCTCC	2 cut(s)	197, 227
Bsc4I	CCNNNNNNNGG	4 cut(s)	344, 557, 1268, 1295
Bse1I	ACTGG	2 cut(s)	137, 1025
BseAI	TCCGGA	1 cut(s)	1090
BseBI	CCWGG	2 cut(s)	533, 1054
BseDI	CCNNGG	1 cut(s)	226
BseGI	GGATG	6 cut(s)	709, 757, 949, 1099, 1131, 1193
BseLI	CCNNNNNNNGG	4 cut(s)	344, 557, 1268, 1295
BseNI	ACTGG	2 cut(s)	137, 1025
BseRI	GAGGAG	1 cut(s)	32
BseSI	GKGCMC	2 cut(s)	570, 1010
BseXI	GCAGC	1 cut(s)	264
BsgI	GTGCAG	2 cut(s)	510, 887
Bsh1236I	CGCG	2 cut(s)	171, 613
Bsh1285I	CGRYCG	1 cut(s)	126
BshFI	GGCC	1 cut(s)	136
BshNI	GGYRCC	3 cut(s)	460, 629, 776
BsiEI	CGRYCG	1 cut(s)	126
BsiHKAI	GWGCWC	2 cut(s)	540, 890
BsiSI	CCGG	4 cut(s)	13, 228, 989, 1091
BslFI	GGGAC	1 cut(s)	47
BslI	CCNNNNNNNGG	4 cut(s)	344, 557, 1268, 1295
BsmAI	GTCTC	2 cut(s)	515, 1070
BsmFI	GGGAC	1 cut(s)	47
BsmI	GAATGC	2 cut(s)	314, 379
BsnI	GGCC	1 cut(s)	136
Bsp1286I	GDGCHC	5 cut(s)	177, 540, 570, 890, 1010
Bsp13I	TCCGGA	1 cut(s)	1090
Bsp143I	GATC	4 cut(s)	123, 489, 1066, 1221
BspACI	CCGC	6 cut(s)	57, 84, 169, 280, 613, 842
BspANI	GGCC	1 cut(s)	136
BspEI	TCCGGA	1 cut(s)	1090
BspFNI	CGCG	2 cut(s)	171, 613
BspHI	TCATGA	1 cut(s)	1098
BspLI	GGNNCC	6 cut(s)	17, 137, 462, 631, 778, 1089
BspT107I	GGYRCC	3 cut(s)	460, 629, 776
BsrI	ACTGG	2 cut(s)	137, 1025
BssECI	CCNNGG	1 cut(s)	226
BssMI	GATC	4 cut(s)	123, 489, 1066, 1221
BssNI	GRCGYC	4 cut(s)	291, 348, 461, 777
BssSI	CACGAG	1 cut(s)	404
Bst2BI	CACGAG	1 cut(s)	404
Bst2UI	CCWGG	2 cut(s)	533, 1054
Bst4CI	ACNGT	3 cut(s)	112, 440, 957
Bst6I	CTCTTC	4 cut(s)	269, 866, 956, 1028
BstACI	GRCGYC	4 cut(s)	291, 348, 461, 777
BstC8I	GCNNGC	4 cut(s)	173, 552, 986, 1010
BstF5I	GGATG	6 cut(s)	709, 757, 949, 1099, 1131, 1193
BstFNI	CGCG	2 cut(s)	171, 613
BstH2I	RGCGCY	4 cut(s)	160, 464, 780, 896
BstHHI	GCGC	4 cut(s)	159, 463, 779, 895
BstKTI	GATC	4 cut(s)	126, 492, 1069, 1224
BstMAI	GTCTC	2 cut(s)	515, 1070
BstMBI	GATC	4 cut(s)	123, 489, 1066, 1221
BstMCI	CGRYCG	1 cut(s)	126
BstMWI	GCNNNNNNNGC	3 cut(s)	288, 354, 724
BstNI	CCWGG	2 cut(s)	533, 1054
BstSCI	CCNGG	3 cut(s)	226, 531, 1052
BstSFI	CTRYAG	1 cut(s)	439
BstSLI	GKGCMC	2 cut(s)	570, 1010
BstUI	CGCG	2 cut(s)	171, 613
BstV1I	GCAGC	1 cut(s)	264
BstV2I	GAAGAC	1 cut(s)	264
BsuRI	GGCC	1 cut(s)	136
BtgZI	GCGATG	2 cut(s)	569, 1182
BtsCI	GGATG	6 cut(s)	709, 757, 949, 1099, 1131, 1193
Cac8I	GCNNGC	4 cut(s)	173, 552, 986, 1010
CciI	TCATGA	1 cut(s)	1098
CfoI	GCGC	4 cut(s)	159, 463, 779, 895
Cfr13I	GGNCC	2 cut(s)	135, 366
CseI	GACGC	2 cut(s)	280, 337
CsiI	ACCWGGT	1 cut(s)	531
Csp6I	GTAC	1 cut(s)	953
CviAII	CATG	3 cut(s)	748, 1099, 1174
CviQI	GTAC	1 cut(s)	953
DinI	GGCGCC	2 cut(s)	462, 778
DpnI	GATC	4 cut(s)	125, 491, 1068, 1223
DpnII	GATC	4 cut(s)	123, 489, 1066, 1221
DraIII	CACNNNGTG	2 cut(s)	427, 535
Eam1104I	CTCTTC	4 cut(s)	269, 866, 956, 1028
EarI	CTCTTC	4 cut(s)	269, 866, 956, 1028
EciI	GGCGGA	1 cut(s)	73
Ecl136II	GAGCTC	1 cut(s)	888
Eco24I	GRGCYC	2 cut(s)	177, 890
Eco47I	GGWCC	1 cut(s)	366
Eco53kI	GAGCTC	1 cut(s)	888
EcoICRI	GAGCTC	1 cut(s)	888
EcoO109I	RGGNCCY	1 cut(s)	366
EcoRI	GAATTC	1 cut(s)	1198
EcoRII	CCWGG	2 cut(s)	531, 1052
EcoT38I	GRGCYC	2 cut(s)	177, 890
EgeI	GGCGCC	2 cut(s)	462, 778
EheI	GGCGCC	2 cut(s)	462, 778
FaeI	CATG	3 cut(s)	751, 1102, 1177
FaqI	GGGAC	1 cut(s)	47
FatI	CATG	3 cut(s)	747, 1098, 1173
FauI	CCCGC	1 cut(s)	176
FbaI	TGATCA	3 cut(s)	489, 1066, 1221
Fnu4HI	GCNGC	4 cut(s)	5, 253, 614, 843
FokI	GGATG	6 cut(s)	716, 764, 956, 1106, 1138, 1200
FriOI	GRGCYC	2 cut(s)	177, 890
Fsp4HI	GCNGC	4 cut(s)	5, 253, 614, 843
GlaI	GCGC	4 cut(s)	158, 462, 778, 894
GluI	GCNGC	4 cut(s)	5, 253, 614, 843
HaeII	RGCGCY	4 cut(s)	160, 464, 780, 896
HaeIII	GGCC	1 cut(s)	136
HapII	CCGG	4 cut(s)	13, 228, 989, 1091
HgaI	GACGC	2 cut(s)	280, 337
HhaI	GCGC	4 cut(s)	159, 463, 779, 895
Hin1I	GRCGYC	4 cut(s)	291, 348, 461, 777
Hin1II	CATG	3 cut(s)	751, 1102, 1177
Hin6I	GCGC	4 cut(s)	157, 461, 777, 893
HinP1I	GCGC	4 cut(s)	157, 461, 777, 893
HindIII	AAGCTT	1 cut(s)	810
HinfI	GANTC	1 cut(s)	400
HpaII	CCGG	4 cut(s)	13, 228, 989, 1091
HphI	GGTGA	7 cut(s)	46, 106, 157, 227, 322, 659, 919
Hpy166II	GTNNAC	2 cut(s)	421, 953
Hpy188I	TCNGA	6 cut(s)	123, 248, 339, 399, 435, 1197
Hpy188III	TCNNGA	5 cut(s)	319, 404, 674, 1091, 1099
Hpy8I	GTNNAC	2 cut(s)	421, 953
Hpy99I	CGWCG	3 cut(s)	92, 296, 545
HpyAV	CCTTC	4 cut(s)	43, 76, 923, 928
HpyCH4III	ACNGT	3 cut(s)	112, 440, 957
HpyCH4IV	ACGT	1 cut(s)	1110
HpyCH4V	TGCA	5 cut(s)	252, 504, 527, 868, 984
HpyF10VI	GCNNNNNNNGC	3 cut(s)	288, 354, 724
HpySE526I	ACGT	1 cut(s)	1110
Hsp92I	GRCGYC	4 cut(s)	291, 348, 461, 777
Hsp92II	CATG	3 cut(s)	751, 1102, 1177
HspAI	GCGC	4 cut(s)	157, 461, 777, 893
KasI	GGCGCC	2 cut(s)	460, 776
Kpn2I	TCCGGA	1 cut(s)	1090
Ksp22I	TGATCA	3 cut(s)	489, 1066, 1221
Kzo9I	GATC	4 cut(s)	123, 489, 1066, 1221
LmnI	GCTCC	2 cut(s)	362, 1093
Lsp1109I	GCAGC	1 cut(s)	264
LweI	GCATC	2 cut(s)	239, 934
MabI	ACCWGGT	1 cut(s)	531
MaeII	ACGT	1 cut(s)	1110
MaeIII	GTNAC	4 cut(s)	112, 577, 679, 787
MalI	GATC	4 cut(s)	125, 491, 1068, 1223
MboI	GATC	4 cut(s)	123, 489, 1066, 1221
MhlI	GDGCHC	5 cut(s)	177, 540, 570, 890, 1010
MluCI	AATT	8 cut(s)	341, 847, 979, 1058, 1198, 1255, 1282, 1300
Mly113I	GGCGCC	2 cut(s)	461, 777
MmeI	TCCRAC	1 cut(s)	376
MroI	TCCGGA	1 cut(s)	1090
MseI	TTAA	1 cut(s)	741
MspA1I	CMGCKG	1 cut(s)	59
MspI	CCGG	4 cut(s)	13, 228, 989, 1091
MspR9I	CCNGG	3 cut(s)	228, 533, 1054
Mva1269I	GAATGC	2 cut(s)	314, 379
MvaI	CCWGG	2 cut(s)	533, 1054
MvnI	CGCG	2 cut(s)	171, 613
MwoI	GCNNNNNNNGC	3 cut(s)	288, 354, 724
NarI	GGCGCC	2 cut(s)	461, 777
NciI	CCSGG	1 cut(s)	228
NdeII	GATC	4 cut(s)	123, 489, 1066, 1221
NlaIII	CATG	3 cut(s)	751, 1102, 1177
NlaIV	GGNNCC	6 cut(s)	17, 137, 462, 631, 778, 1089
NmeAIII	GCCGAG	1 cut(s)	869
NmuCI	GTSAC	3 cut(s)	112, 577, 679
PagI	TCATGA	1 cut(s)	1098
PctI	GAATGC	2 cut(s)	314, 379
PfeI	GAWTC	1 cut(s)	400
PkrI	GCNGC	4 cut(s)	6, 254, 615, 844
Ple19I	CGATCG	1 cut(s)	126
PluTI	GGCGCC	2 cut(s)	464, 780
PpuMI	RGGWCCY	1 cut(s)	366
Psp124BI	GAGCTC	1 cut(s)	890
Psp5II	RGGWCCY	1 cut(s)	366
Psp6I	CCWGG	2 cut(s)	531, 1052
PspGI	CCWGG	2 cut(s)	531, 1052
PspN4I	GGNNCC	6 cut(s)	17, 137, 462, 631, 778, 1089
PspPI	GGNCC	2 cut(s)	135, 366
PspPPI	RGGWCCY	1 cut(s)	366
PvuI	CGATCG	1 cut(s)	126
RsaI	GTAC	1 cut(s)	954
RsaNI	GTAC	1 cut(s)	953
SacI	GAGCTC	1 cut(s)	890
SaqAI	TTAA	1 cut(s)	741
SatI	GCNGC	4 cut(s)	5, 253, 614, 843
Sau3AI	GATC	4 cut(s)	123, 489, 1066, 1221
Sau96I	GGNCC	2 cut(s)	135, 366
ScrFI	CCNGG	3 cut(s)	228, 533, 1054
SduI	GDGCHC	5 cut(s)	177, 540, 570, 890, 1010
SexAI	ACCWGGT	1 cut(s)	531
SfaNI	GCATC	2 cut(s)	239, 934
SfcI	CTRYAG	1 cut(s)	439
SfoI	GGCGCC	2 cut(s)	462, 778
SinI	GGWCC	1 cut(s)	366
Sse9I	AATT	8 cut(s)	341, 847, 979, 1058, 1198, 1255, 1282, 1300
SsiI	CCGC	6 cut(s)	57, 84, 169, 280, 613, 842
SspDI	GGCGCC	2 cut(s)	460, 776
SstI	GAGCTC	1 cut(s)	890
StyD4I	CCNGG	3 cut(s)	226, 531, 1052
TaaI	ACNGT	3 cut(s)	112, 440, 957
TaiI	ACGT	1 cut(s)	1113
TaqI	TCGA	4 cut(s)	90, 126, 183, 540
TasI	AATT	8 cut(s)	341, 847, 979, 1058, 1198, 1255, 1282, 1300
TatI	WGTACW	1 cut(s)	952
TauI	GCSGC	2 cut(s)	616, 845
TfiI	GAWTC	1 cut(s)	400
Tru1I	TTAA	1 cut(s)	741
Tru9I	TTAA	1 cut(s)	741
TseFI	GTSAC	3 cut(s)	112, 577, 679
TseI	GCWGC	2 cut(s)	4, 252
Tsp45I	GTSAC	3 cut(s)	112, 577, 679
TspDTI	ATGAA	1 cut(s)	256
TspGWI	ACGGA	1 cut(s)	349
VpaK11BI	GGWCC	1 cut(s)	366
XapI	RAATTY	4 cut(s)	341, 1198, 1255, 1282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.