MD05G1207800.v1.1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
33895190 .. 33897766
2577 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1207800.v1.1.491

Sequence Viewer

Length: 2577 bp
ATGGCTGAAATTGCCGTACCAGTAGCGTTGTTTCTGGCGGACAAAGTGATAATGTTCCTCGACAAAAAATTCGGCCGATCGAGCATTAATAATAATAATCCCTGTGATGATGTTGGAAGAGCCAGAAGCTGTTTAGAGAGGATGCGCGCATATCTTAGTGACCACTCATCAGCAGAACTGTCTGCTTACGATGGAGGGTCTCAACAGTTTCAAGCTCGTGTAAAAGAGATCCGAAATATAGCTTATGAAATTGAAGACGTTCTTGACGAATTTCTGCTTCATGTCCCTCATCAATTCCACAACGACGTCTCTCAGAAGCTACACGATGCTGTGAAATTTTTCACGGTACAGAAAGCAAGCCGTGAGTTCTCGGACAGAATTCAAAATATTGACAAGAAGCTAAATTTTGTTTTCACTCTTGATAAAATTCCACAATTTCCGGGACGAGATCAAGAAAGTCGCCCAAGTTCCAGCACCACAAGACATGGAGATAGCACGGTGACTCATCATAACCAATTCCTTGAAGAAGAAGAAATGGTAGGGTTTGAGAAGCCTAAAGAAAAACTCATCAGTCAGTTGATGAAAGGAGATCCAAGGTTTCCGAATATCTCGCTTGTAGGTCCTGGTGGCTCAGGCAAAACCACTCTTTTGAAGAATGTCTTCAAGAGCAAAAAGGTCCAACGGTTTTTTGAATGCCATGCTTGGATTGATGTGCCGCGTGACTTGTGTGCCCGTAAACTTGATGAGCTCTTGCTCAACATGTTAAGCAAATTTGATCCAAAAGGCAGAAGGAAGGAATCAGTTAATCATGAAGATTTGGTAAGAGCTTTGAAGGGCAAGAAGTTTGTGGTCGTGTTAGATAATGTTTGGAGCAAACAAGATTTGGAACGCATTGTAAATGTTTTACCAAATGATTTACCTGGGACTGGGAGTAAAATAGTCATAACTACTCGTTACTCTGAAGTAGCGTCTTCTCATGCAAACTCTTCGTACATCCACAATATGAGCAAAGTGTTGTCATGGGAACAAGCTTGGAATCTATTCTGCCGAAAGGCTTTTCACAAGAGCGAAGGAAAGTGTCCAACCCAGATTTTGGACTGCGCAGAGAAAATCGTCAAGAAGTGTGAAGGCTTGCCCCTTGCAATTTCTGCTGTTGGTACTTTGCTAGCAACGAAGCGACCAACTCCACTTGATTGGAAGAAGTTACATGAGAGCCTTGGATCAAATGTTCCCATTATTACCCAAATATTGGAGCCAAGTTACAAGGACCTTCCAAGCCATCTTAAGACTTGTTTCTTGTACTTTGGCATGTTTCCTGAAGACTACTCCATTAGCCGTGAAAGGCTAATTCGCTTGTGGGTAGCTGAAGGATTTGTGATGCAGAGCAGATCAAGAAAACTAATGGAGGAGGTTGCAGGAGGCTATCTGAATGATCTCATTGGAAGAAATTTAGTTCATGTGAGTTCAAGGGAAGTCGATGGAAGAGTCAGAAGCTGCCGTGTACTGAACCTCGTTCGCGAGTTCATCATTGAAAAAGCGGAGAATTTCATCACTGTCTCGTTGGCAGCAAACTGCAGAGGTACTGCTCCAGGTGAGAAAATTCGACACCTTTCTGTTCATGATGTTCGTAAGGGCAACAATTTTTCAAGTGGTACAGATTTGAGTTGTACTCGTACCATGCTATTAAGTGGGCAGGGAAGTTATGATTCCGAGCTTGAAAGACTACTTAAAACCTTTAAATTTTTAAAGGTTTTAGATTTGCAAGGGATAAATTTGGACAACTTTCCCGATTCTGTTTTTGGTCTCACCCTCTTGAGGTACATAAGTCTAAGGCACACCGATATTAAAGAAGTGCCAAAGTCCATAAAGAAGCTTGGATTCTTGGAAACCTCAGACCTTAAGCACACAAAAGTGACCAATTTACCAAAACAGATTTATAAGCTCCGCAATTTGCACCACCTTTTAGTCTATCGCTATGATGTCACGAATTATGTGACATTTGAAGCTGCAAGAAGCGTAGAGCTCTCTGCAGGCAACATTTCATCTTTATCCTCCATACAAAAGTTGTCACTAATTAGTGTAAAAAATAACAGAAAAATCATAACAGCCTTACGAGAGTTGAAAGGTCTTAGGAAACTGGGGTTGACCGATCTTCAAAAAGAAGATGGAAGGAAGTTGTGTTGTTCTCTTCATGAAATGGAGCAGCTCTCGACATTGGATGTACGATCAACGAGCGAGGAGGACTTTCTGGATTTGGATCATGGTGAATTTCGTCCTGACTTTCTGCAACGCCTATATTTGAAAGGGCGCCTAGAAAGGCTGCCAATGTGGATTTCCAAACTTCACAGCGTAGTAAAGATTGGTTTAAAGTGGTCAAAACTTCAGGCTAATGAAAACCCACTTGAGGCCCTTCAAGCTTTGCCTGAGCTGATGGAGCTCGATTTGGTTCAGTATCACACCGGTGCAGAGTTGAAATTCAAAGCTGAAACGTTCAACAAGCTAAAGATATTACATATTGAACAGTTTGATCAGCTAAATAAGATGGTAGTCGAGAACGGGGCAATGCCTAAGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

859

Amino Acids

97.91

Weight (kDa)

9.1

Isoelectric Point (pI)

37.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 36 - 99 4.4e-09 Rx N-terminal domain
NB-ARC PF00931 183 - 356 1.2e-36 NB-ARC domain
WHD_DRP PF23559 437 - 509 4.5e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 575 - 858 9e-41 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1938
AatII GACGTC 1 cut(s) 309
Acc16I TGCGCA 1 cut(s) 1102
AccB1I GGYRCC 1 cut(s) 2307
AccB7I CCANNNNNTGG 2 cut(s) 1093, 1249
AccII CGCG 3 cut(s) 147, 718, 1518
AciI CCGC 4 cut(s) 38, 716, 1538, 1945
AclI AACGTT 1 cut(s) 2489
AclWI GGATC 5 cut(s) 223, 584, 770, 1228, 2265
AcoI YGGCCR 1 cut(s) 73
AcuI CTGAAG 4 cut(s) 981, 1338, 1386, 2366
AcyI GRCGYC 2 cut(s) 306, 2308
AfiI CCNNNNNNNGG 5 cut(s) 926, 1093, 1249, 1815, 2404
AflII CTTAAG 2 cut(s) 1283, 1898
AflIII ACRYGT 1 cut(s) 759
AgeI ACCGGT 1 cut(s) 2459
AjnI CCWGG 3 cut(s) 622, 919, 1588
AjuI GAANNNNNNNTTGG 2 cut(s) 2317, 2349
AleI CACNNNNGTG 2 cut(s) 1910, 2460
AloI GAACNNNNNNTCC 2 cut(s) 1212, 1244
Alw21I GWGCWC 3 cut(s) 750, 2025, 2439
Alw26I GTCTC 4 cut(s) 204, 313, 1561, 1808
AlwI GGATC 5 cut(s) 223, 584, 770, 1228, 2265
AlwNI CAGNNNCTG 2 cut(s) 129, 1494
AoxI GGCC 2 cut(s) 73, 2406
ApeKI GCWGC 5 cut(s) 1494, 1565, 2006, 2203, 2320
ArsI GACNNNNNNTTYG 2 cut(s) 53, 85
AseI ATTAAT 1 cut(s) 87
AsiGI ACCGGT 1 cut(s) 2459
Asp700I GAANNNNTTC 4 cut(s) 258, 338, 659, 1040
AspLEI GCGC 4 cut(s) 147, 149, 1103, 2310
AspS9I GGNCC 4 cut(s) 620, 676, 1267, 2407
AsuC2I CCSGG 1 cut(s) 441
AsuHPI GGTGA 4 cut(s) 511, 1604, 1798, 2276
AsuNHI GCTAGC 1 cut(s) 1165
AvaII GGWCC 3 cut(s) 620, 676, 1267
BaeGI GKGCMC 1 cut(s) 733
BaeI ACNNNNGTAYC 2 cut(s) 1810, 1843
BanI GGYRCC 1 cut(s) 2307
BanII GRGCYC 3 cut(s) 750, 2025, 2439
BauI CACGAG 1 cut(s) 216
BbsI GAAGAC 4 cut(s) 261, 652, 963, 1326
Bbv12I GWGCWC 3 cut(s) 750, 2025, 2439
BbvI GCAGC 5 cut(s) 1481, 1577, 1993, 2215, 2307
BccI CCATC 6 cut(s) 185, 1287, 1472, 2159, 2425, 2536
BceAI ACGGC 3 cut(s) 345, 1320, 1482
BcgI CGANNNNNNTGC 2 cut(s) 969, 1003
BciT130I CCWGG 3 cut(s) 624, 921, 1590
BclI TGATCA 1 cut(s) 2527
BcnI CCSGG 1 cut(s) 441
BcoDI GTCTC 4 cut(s) 204, 313, 1561, 1808
BfaI CTAG 2 cut(s) 1166, 2312
BfmI CTRYAG 2 cut(s) 1573, 2028
BfoI RGCGCY 1 cut(s) 2311
BfrI CTTAAG 2 cut(s) 1283, 1898
BisI GCNGC 6 cut(s) 716, 1495, 1566, 2007, 2204, 2321
BlsI GCNGC 6 cut(s) 717, 1496, 1567, 2008, 2205, 2322
Bme1390I CCNGG 4 cut(s) 441, 624, 921, 1590
Bme18I GGWCC 3 cut(s) 620, 676, 1267
BmgT120I GGNCC 4 cut(s) 620, 676, 1267, 2407
BmiI GGNNCC 2 cut(s) 1254, 2309
BmrFI CCNGG 4 cut(s) 441, 624, 921, 1590
BmrI ACTGGG 2 cut(s) 936, 2147
BmsI GCATC 3 cut(s) 132, 316, 1368
BmtI GCTAGC 1 cut(s) 1169
BmuI ACTGGG 2 cut(s) 936, 2147
BpiI GAAGAC 4 cut(s) 261, 652, 963, 1326
BplI GAGNNNNNCTC 4 cut(s) 1654, 1686, 2192, 2224
BpmI CTGGAG 1 cut(s) 1572
Bpu10I CCTNAGC 3 cut(s) 631, 2424, 2568
BpuEI CTTGAG 2 cut(s) 1834, 2423
BpuMI CCSGG 1 cut(s) 441
BsaBI GATNNNNATC 1 cut(s) 2256
BsaHI GRCGYC 2 cut(s) 306, 2308
BsaI GGTCTC 2 cut(s) 204, 1808
BsaJI CCNNGG 3 cut(s) 593, 920, 1216
BsaWI WCCGGW 1 cut(s) 2459
Bsc4I CCNNNNNNNGG 5 cut(s) 926, 1093, 1249, 1815, 2404
Bse118I RCCGGY 1 cut(s) 2459
Bse1I ACTGG 3 cut(s) 20, 931, 2142
Bse3DI GCAATG 1 cut(s) 2568
Bse8I GATNNNNATC 1 cut(s) 2256
BseBI CCWGG 3 cut(s) 624, 921, 1590
BseDI CCNNGG 3 cut(s) 593, 920, 1216
BseGI GGATG 3 cut(s) 147, 993, 2224
BseJI GATNNNNATC 1 cut(s) 2256
BseLI CCNNNNNNNGG 5 cut(s) 926, 1093, 1249, 1815, 2404
BseMI GCAATG 1 cut(s) 2568
BseMII CTCAG 4 cut(s) 326, 645, 1905, 2415
BseNI ACTGG 3 cut(s) 20, 931, 2142
BsePI GCGCGC 1 cut(s) 145
BseRI GAGGAG 2 cut(s) 1421, 2252
BseSI GKGCMC 1 cut(s) 733
BseX3I CGGCCG 1 cut(s) 73
BseXI GCAGC 5 cut(s) 1481, 1577, 1993, 2215, 2307
BsgI GTGCAG 1 cut(s) 2484
Bsh1236I CGCG 3 cut(s) 147, 718, 1518
Bsh1285I CGRYCG 2 cut(s) 76, 80
BshFI GGCC 2 cut(s) 75, 2408
BshNI GGYRCC 1 cut(s) 2307
BshTI ACCGGT 1 cut(s) 2459
BsiEI CGRYCG 2 cut(s) 76, 80
BsiHKAI GWGCWC 3 cut(s) 750, 2025, 2439
BsiSI CCGG 2 cut(s) 440, 2460
BslFI GGGAC 3 cut(s) 269, 456, 937
BslI CCNNNNNNNGG 5 cut(s) 926, 1093, 1249, 1815, 2404
BsmAI GTCTC 4 cut(s) 204, 313, 1561, 1808
BsmBI CGTCTC 1 cut(s) 313
BsmFI GGGAC 3 cut(s) 269, 456, 937
BsmI GAATGC 1 cut(s) 698
BsnI GGCC 2 cut(s) 75, 2408
Bso31I GGTCTC 2 cut(s) 204, 1808
Bsp1286I GDGCHC 4 cut(s) 733, 750, 2025, 2439
Bsp68I TCGCGA 1 cut(s) 1518
BspACI CCGC 4 cut(s) 38, 716, 1538, 1945
BspANI GGCC 2 cut(s) 75, 2408
BspCNI CTCAG 4 cut(s) 325, 644, 1904, 2416
BspFNI CGCG 3 cut(s) 147, 718, 1518
BspHI TCATGA 3 cut(s) 808, 1618, 2191
BspLI GGNNCC 2 cut(s) 1254, 2309
BspMAI CTGCAG 2 cut(s) 1577, 2032
BspOI GCTAGC 1 cut(s) 1169
BspPI GGATC 5 cut(s) 223, 584, 770, 1228, 2265
BspQI GCTCTTC 1 cut(s) 112
BspT107I GGYRCC 1 cut(s) 2307
BspTI CTTAAG 2 cut(s) 1283, 1898
BspTNI GGTCTC 2 cut(s) 204, 1808
BsrDI GCAATG 1 cut(s) 2568
BsrFI RCCGGY 1 cut(s) 2459
BsrI ACTGG 3 cut(s) 20, 931, 2142
BssAI RCCGGY 1 cut(s) 2459
BssECI CCNNGG 3 cut(s) 593, 920, 1216
BssHII GCGCGC 1 cut(s) 145
BssNI GRCGYC 2 cut(s) 306, 2308
BssSI CACGAG 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 593, 1216
Bst2BI CACGAG 1 cut(s) 216
Bst2UI CCWGG 3 cut(s) 624, 921, 1590
Bst4CI ACNGT 7 cut(s) 180, 207, 346, 499, 684, 1555, 2523
Bst6I CTCTTC 4 cut(s) 112, 991, 1477, 2193
BstACI GRCGYC 2 cut(s) 306, 2308
BstAFI CTTAAG 2 cut(s) 1283, 1898
BstAPI GCANNNNNTGC 1 cut(s) 1148
BstC8I GCNNGC 5 cut(s) 147, 358, 1133, 1167, 2032
BstDEI CTNAG 8 cut(s) 155, 312, 631, 1829, 1891, 2129, 2424, 2568
BstF5I GGATG 3 cut(s) 147, 993, 2224
BstFNI CGCG 3 cut(s) 147, 718, 1518
BstH2I RGCGCY 1 cut(s) 2311
BstHHI GCGC 4 cut(s) 147, 149, 1103, 2310
BstMAI GTCTC 4 cut(s) 204, 313, 1561, 1808
BstMCI CGRYCG 2 cut(s) 76, 80
BstMWI GCNNNNNNNGC 5 cut(s) 11, 81, 1148, 2414, 2434
BstNI CCWGG 3 cut(s) 624, 921, 1590
BstNSI RCATGY 2 cut(s) 763, 1312
BstSCI CCNGG 4 cut(s) 439, 622, 919, 1588
BstSFI CTRYAG 2 cut(s) 1573, 2028
BstSLI GKGCMC 1 cut(s) 733
BstUI CGCG 3 cut(s) 147, 718, 1518
BstV1I GCAGC 5 cut(s) 1481, 1577, 1993, 2215, 2307
BstV2I GAAGAC 4 cut(s) 261, 652, 963, 1326
BstX2I RGATCY 2 cut(s) 228, 589
BstXI CCANNNNNNTGG 1 cut(s) 1194
BstYI RGATCY 2 cut(s) 228, 589
BstZI CGGCCG 1 cut(s) 73
BsuRI GGCC 2 cut(s) 75, 2408
BtsCI GGATG 3 cut(s) 147, 993, 2224
BtsIMutI CAGTG 1 cut(s) 1551
BtuMI TCGCGA 1 cut(s) 1518
Cac8I GCNNGC 5 cut(s) 147, 358, 1133, 1167, 2032
CaiI CAGNNNCTG 2 cut(s) 129, 1494
CciI TCATGA 3 cut(s) 808, 1618, 2191
CfoI GCGC 4 cut(s) 147, 149, 1103, 2310
Cfr10I RCCGGY 1 cut(s) 2459
Cfr13I GGNCC 4 cut(s) 620, 676, 1267, 2407
CseI GACGC 1 cut(s) 957
CspAI ACCGGT 1 cut(s) 2459
DdeI CTNAG 8 cut(s) 155, 312, 631, 1829, 1891, 2129, 2424, 2568
DinI GGCGCC 1 cut(s) 2309
DraI TTTAAA 3 cut(s) 1738, 1746, 2367
EaeI YGGCCR 1 cut(s) 73
EagI CGGCCG 1 cut(s) 73
Eam1104I CTCTTC 4 cut(s) 112, 991, 1477, 2193
EarI CTCTTC 4 cut(s) 112, 991, 1477, 2193
EciI GGCGGA 1 cut(s) 53
Ecl136II GAGCTC 3 cut(s) 748, 2023, 2437
EclXI CGGCCG 1 cut(s) 73
Eco130I CCWWGG 2 cut(s) 593, 1216
Eco24I GRGCYC 3 cut(s) 750, 2025, 2439
Eco31I GGTCTC 2 cut(s) 204, 1808
Eco47I GGWCC 3 cut(s) 620, 676, 1267
Eco52I CGGCCG 1 cut(s) 73
Eco53kI GAGCTC 3 cut(s) 748, 2023, 2437
Eco57I CTGAAG 4 cut(s) 981, 1338, 1386, 2366
EcoICRI GAGCTC 3 cut(s) 748, 2023, 2437
EcoO109I RGGNCCY 3 cut(s) 620, 1267, 2407
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 3 cut(s) 622, 919, 1588
EcoT14I CCWWGG 2 cut(s) 593, 1216
EcoT38I GRGCYC 3 cut(s) 750, 2025, 2439
EgeI GGCGCC 1 cut(s) 2309
EheI GGCGCC 1 cut(s) 2309
ErhI CCWWGG 2 cut(s) 593, 1216
Esp3I CGTCTC 1 cut(s) 313
FalI AAGNNNNNCTT 4 cut(s) 246, 278, 644, 676
FaqI GGGAC 3 cut(s) 269, 456, 937
FbaI TGATCA 1 cut(s) 2527
Fnu4HI GCNGC 6 cut(s) 716, 1495, 1566, 2007, 2204, 2321
FokI GGATG 3 cut(s) 154, 980, 2231
FriOI GRGCYC 3 cut(s) 750, 2025, 2439
Fsp4HI GCNGC 6 cut(s) 716, 1495, 1566, 2007, 2204, 2321
FspBI CTAG 2 cut(s) 1166, 2312
FspI TGCGCA 1 cut(s) 1102
GlaI GCGC 4 cut(s) 146, 148, 1102, 2309
GluI GCNGC 6 cut(s) 716, 1495, 1566, 2007, 2204, 2321
GsuI CTGGAG 1 cut(s) 1572
HaeII RGCGCY 1 cut(s) 2311
HaeIII GGCC 2 cut(s) 75, 2408
HapII CCGG 2 cut(s) 440, 2460
HgaI GACGC 1 cut(s) 957
HhaI GCGC 4 cut(s) 147, 149, 1103, 2310
Hin1I GRCGYC 2 cut(s) 306, 2308
Hin6I GCGC 4 cut(s) 145, 147, 1101, 2308
HinP1I GCGC 4 cut(s) 145, 147, 1101, 2308
HincII GTYRAC 1 cut(s) 2145
HindII GTYRAC 1 cut(s) 2145
HindIII AAGCTT 3 cut(s) 1029, 1871, 2415
HinfI GANTC 7 cut(s) 502, 797, 1036, 1485, 1706, 1790, 1878
HpaII CCGG 2 cut(s) 440, 2460
HphI GGTGA 4 cut(s) 511, 1604, 1798, 2276
Hpy166II GTNNAC 3 cut(s) 737, 1502, 2145
Hpy188I TCNGA 9 cut(s) 233, 315, 373, 603, 961, 1428, 1490, 1711, 1894
Hpy8I GTNNAC 3 cut(s) 737, 1502, 2145
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 9 cut(s) 783, 787, 826, 1064, 1121, 1280, 1361, 2163, 2420
HpyCH4III ACNGT 7 cut(s) 180, 207, 346, 499, 684, 1555, 2523
HpyCH4IV ACGT 3 cut(s) 258, 306, 2489
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 81, 1148, 2414, 2434
HpyF3I CTNAG 8 cut(s) 155, 312, 631, 1829, 1891, 2129, 2424, 2568
HpySE526I ACGT 3 cut(s) 258, 306, 2489
Hsp92I GRCGYC 2 cut(s) 306, 2308
HspAI GCGC 4 cut(s) 145, 147, 1101, 2308
KasI GGCGCC 1 cut(s) 2307
Ksp22I TGATCA 1 cut(s) 2527
LguI GCTCTTC 1 cut(s) 112
LmnI GCTCC 6 cut(s) 870, 1252, 1591, 1947, 2200, 2434
Lsp1109I GCAGC 5 cut(s) 1481, 1577, 1993, 2215, 2307
LweI GCATC 3 cut(s) 132, 316, 1368
MaeI CTAG 2 cut(s) 1166, 2312
MaeII ACGT 3 cut(s) 258, 306, 2489
MflI RGATCY 2 cut(s) 228, 589
MhlI GDGCHC 4 cut(s) 733, 750, 2025, 2439
Mly113I GGCGCC 1 cut(s) 2308
MlyI GAGTC 2 cut(s) 496, 1494
MmeI TCCRAC 3 cut(s) 94, 703, 1106
MroXI GAANNNNTTC 4 cut(s) 258, 338, 659, 1040
MslI CAYNNNNRTG 2 cut(s) 1910, 2460
MspCI CTTAAG 2 cut(s) 1283, 1898
MspI CCGG 2 cut(s) 440, 2460
MspR9I CCNGG 4 cut(s) 441, 624, 921, 1590
Mva1269I GAATGC 1 cut(s) 698
MvaI CCWGG 3 cut(s) 624, 921, 1590
MvnI CGCG 3 cut(s) 147, 718, 1518
MwoI GCNNNNNNNGC 5 cut(s) 11, 81, 1148, 2414, 2434
NarI GGCGCC 1 cut(s) 2308
NciI CCSGG 1 cut(s) 441
NheI GCTAGC 1 cut(s) 1165
NlaIV GGNNCC 2 cut(s) 1254, 2309
NmuCI GTSAC 7 cut(s) 158, 499, 719, 1912, 1981, 1993, 2067
NruI TCGCGA 1 cut(s) 1518
NsbI TGCGCA 1 cut(s) 1102
NspI RCATGY 2 cut(s) 763, 1312
OliI CACNNNNGTG 2 cut(s) 1910, 2460
PagI TCATGA 3 cut(s) 808, 1618, 2191
PauI GCGCGC 1 cut(s) 145
PciI ACATGT 1 cut(s) 759
PciSI GCTCTTC 1 cut(s) 112
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PctI GAATGC 1 cut(s) 698
PdmI GAANNNNTTC 4 cut(s) 258, 338, 659, 1040
PfeI GAWTC 5 cut(s) 797, 1036, 1706, 1790, 1878
PflMI CCANNNNNTGG 2 cut(s) 1093, 1249
PfoI TCCNGGA 1 cut(s) 439
PinAI ACCGGT 1 cut(s) 2459
PkrI GCNGC 6 cut(s) 717, 1496, 1567, 2008, 2205, 2322
Ple19I CGATCG 1 cut(s) 80
PleI GAGTC 2 cut(s) 496, 1493
PluTI GGCGCC 1 cut(s) 2311
PpsI GAGTC 2 cut(s) 496, 1493
PpuMI RGGWCCY 2 cut(s) 620, 1267
PscI ACATGT 1 cut(s) 759
PshBI ATTAAT 1 cut(s) 87
PsiI TTATAA 1 cut(s) 1938
Psp124BI GAGCTC 3 cut(s) 750, 2025, 2439
Psp1406I AACGTT 1 cut(s) 2489
Psp5II RGGWCCY 2 cut(s) 620, 1267
Psp6I CCWGG 3 cut(s) 622, 919, 1588
PspGI CCWGG 3 cut(s) 622, 919, 1588
PspN4I GGNNCC 2 cut(s) 1254, 2309
PspPI GGNCC 4 cut(s) 620, 676, 1267, 2407
PspPPI RGGWCCY 2 cut(s) 620, 1267
PstI CTGCAG 2 cut(s) 1577, 2032
PstNI CAGNNNCTG 2 cut(s) 129, 1494
PsuI RGATCY 2 cut(s) 228, 589
PteI GCGCGC 1 cut(s) 145
PvuI CGATCG 1 cut(s) 80
RruI TCGCGA 1 cut(s) 1518
RseI CAYNNNNRTG 2 cut(s) 1910, 2460
SacI GAGCTC 3 cut(s) 750, 2025, 2439
SapI GCTCTTC 1 cut(s) 112
SatI GCNGC 6 cut(s) 716, 1495, 1566, 2007, 2204, 2321
Sau96I GGNCC 4 cut(s) 620, 676, 1267, 2407
SchI GAGTC 2 cut(s) 496, 1494
ScrFI CCNGG 4 cut(s) 441, 624, 921, 1590
SduI GDGCHC 4 cut(s) 733, 750, 2025, 2439
SfaNI GCATC 3 cut(s) 132, 316, 1368
SfcI CTRYAG 2 cut(s) 1573, 2028
SfoI GGCGCC 1 cut(s) 2309
SgrAI CRCCGGYG 1 cut(s) 2459
SinI GGWCC 3 cut(s) 620, 676, 1267
SmiMI CAYNNNNRTG 2 cut(s) 1910, 2460
SmlI CTYRAG 4 cut(s) 1283, 1813, 1898, 2402
SmoI CTYRAG 4 cut(s) 1283, 1813, 1898, 2402
SsiI CCGC 4 cut(s) 38, 716, 1538, 1945
SspDI GGCGCC 1 cut(s) 2307
SspI AATATT 2 cut(s) 388, 1248
SspMI CTAG 2 cut(s) 1166, 2312
SstI GAGCTC 3 cut(s) 750, 2025, 2439
StyD4I CCNGG 4 cut(s) 439, 622, 919, 1588
StyI CCWWGG 2 cut(s) 593, 1216
TaaI ACNGT 7 cut(s) 180, 207, 346, 499, 684, 1555, 2523
TaiI ACGT 3 cut(s) 261, 309, 2492
TaqI TCGA 7 cut(s) 60, 80, 1476, 1603, 2210, 2439, 2550
TaqII GACCGA 1 cut(s) 2162
TatI WGTACW 3 cut(s) 1299, 1501, 1667
TauI GCSGC 1 cut(s) 718
TfiI GAWTC 5 cut(s) 797, 1036, 1706, 1790, 1878
TscAI CASTG 1 cut(s) 1558
TseFI GTSAC 7 cut(s) 158, 499, 719, 1912, 1981, 1993, 2067
TseI GCWGC 5 cut(s) 1494, 1565, 2006, 2203, 2320
Tsp45I GTSAC 7 cut(s) 158, 499, 719, 1912, 1981, 1993, 2067
TspRI CASTG 1 cut(s) 1558
Van91I CCANNNNNTGG 2 cut(s) 1093, 1249
Vha464I CTTAAG 2 cut(s) 1283, 1898
VpaK11BI GGWCC 3 cut(s) 620, 676, 1267
VspI ATTAAT 1 cut(s) 87
XceI RCATGY 2 cut(s) 763, 1312
XmnI GAANNNNTTC 4 cut(s) 258, 338, 659, 1040
XspI CTAG 2 cut(s) 1166, 2312
ZraI GACGTC 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.