Rh5CG213200

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000865
Physical Location & Seq
Reverse (-)
21580610 .. 21583570
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG213200.1

Sequence Viewer

Length: 2340 bp
ATGGCCGCGGATATTGCCGTTTCAGCAGCATTGGCATTAGTTGAGAAGGTCGCAAGCTTCGTCGACAAAATACGCAAAAGTCCAAGCCATGTCCGTGAAGCTCTTGATAAGGCAAGAACTTGTTTGGAGAGGATGGATGCCTATCTAACGACGTCCCAAGCACGGATTGATCAAGGCAATCAAGTGCAGCTTCAAGCTCGTGTTAAACAGGTCCGAGATGTAGTTCATTACATTGAGGATGCACTTGACGAGTTCACAATTCAGGTTCCCCATCACTCCCAGTATACCCATTGGTATTCTGGGATGACACGCTGCGCTGCTCATTCCACGTCTTATTGGTTAGCAAGTAACAGATTGTCCTCCGAAATTGAAGTTATTATTACAAATAAGATCGGTTTTCTTAAAGAACTCGATGGACTCACACAAGAAGGCCAACCAACTTGTAGCACAAGCCAGCAGCATGGAGGTACTTTGACCCCGCAAGTTCTTGAAGACGATGAAATAGTGGGCTTTGACGTGCCTAAACAAAAACTCATTGAACAGTTGATGAAAGGAGATCCAAAGCGTCTGACGATTTCCATTGTAGGTCCTGGCGGCTCCGGCAAAACCACTATCATGAGGAATGTTTACGACACTAAAAAGGTTCAAAGGAATTTTAATTGCCGAGCTTGGATCGATGTGTTGCGTCCTCTAAATCTCGAAAATGTGTTGCGCACCATGTTGAGCAGTTTTGATCCAAAAGGAAAACGGCAGGAACCAGAAGGAACAATTAATTGTCTAAAAGAGAAATTGAAACTACTTCTGCAGAAAAAGAAGTTTCTGGTTGTCTTGGATAATGTTTGGCGTAACGAGGATTTGGAGTCCATTGTAAATGCACTGCCCAATGGTTCCCCTGGGAGTAAAATACTCGTATCAACTCGTACGTCTGATGTTGCTTCTCATTCCTCCAATAACTACATCCATGACTTGAGTCGTGGCTTATCAAAGCAACATGCCCGAAACTTGGTTAGCATCAGCAGCAAGGAAACTGATGGACAAGTAAGGAGGTGTCGTGTTTCGAATCTTGTTCACCACTTCATCATTTCTAAACCTGAGAATTTTCTCTGTGTTTTGAAAGCGAACCACAGTACTACTGATTCAGGTACAAAAATTCGACGCCTTTCTGTTCAAGATGACAACATCACTATATCAGGGTCTGCATATGATTTGAATGGTATTCGTACCTTGCTAGTATTTGGCCAGGGGAGTTCTAATAATTTCCGCCAGTTTGGAAATGTACTTAAAAACTTCAAGTTTTTAAAGGTTTTAGATTTGCAAGGTGCGCCTTTGAAGAAGTTTCCAAAAGGTGTTGTCGGTCTCACCCTCTTAAGGTATTTGAGCCTAAGGGAAACTAAGATTAAAAGAGTTCCAAGGTCCATTATCAAGCTTGGATTCTTGGAAACCTTAGATCTTAAACACACCCAGATAACCCATTTGCCAAAAGAGATATGTAAACTCTCCAATCTGCGCCACCTCTTAGTCCATCACTGGGATGCTGCATCTAAAAATATCCAAGCGGTAGTGGTTTCTTCAGGAAATATTAAAGCCCTACGGTCCATACAAAAGTTGTCACTAATTGAGGTGAAAAAGAGAAACAATAGAAAGCTCATAAAAGCCTTGGGAGAGTTGGTAGATCTAAGGAAGTTGGGGCTGCAAGTAGATCTTGCAAGTCAAGAAGATAGAAGACAATTATGTTCATCCATTCAGAAAATGAAACATCTTTCCATGCTTGATCTAAGATCAAAGAGCTTGGAAGTGTATCTAGATTTGGATCATATGGAATCCCCACCTAAGTATGTACAACGTCTACATTTGGAAGGGCTCCTAGACACGCTGCCGCGGTGGATCCCCAAGCTTGAAAGTCTGTCCAAGATTGCTCTAAAGTGCTCAAAACTGAATGCTAGGGTGGAACCCCTTGAGGCCCTTGAGTCTTTGCCTAATCTGATGGAGCTCGACTTGGTTGATTATTCCGAAGGGGAAGTGTTGAAATTCAAAGCTGGAACGTTTAAAGAACTAATTCTAGTAAGTATAGAACAATTTGATCAGCTAAGAAAGATGGTCATCGAGAATGGGGCGATGCCTAAGCTTAAGAAGCTAACCATATCCAAATGTCGCAATCTGGAGTTAGTTCCAAAGGGCATCGAGGGTCTCACATCCCTCGACCAACTGTGTGTAAATGACATGCACACGAAATTCATTGCTCACTTGAAAGGCATAGCGAACAGAAGCAGCTGGGATATTTTTCGACGCAAGATTTCAGGAGGTTGCAAGATTGTTATTGATGGCACTGAGCAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

779

Amino Acids

87.79

Weight (kDa)

9.54

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 12 - 94 6.4e-11 Rx N-terminal domain
NB-ARC PF00931 174 - 336 7.7e-32 NB-ARC domain
LRR_14 PF23598 419 - 738 1.1e-47 Leucine-rich repeat region
LRR_8 PF13855 456 - 509 7.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 155
Acc16I TGCGCA 1 cut(s) 713
AccI GTMKAC 3 cut(s) 63, 284, 1846
AccII CGCG 2 cut(s) 8, 1879
AciI CCGC 8 cut(s) 6, 8, 479, 594, 1261, 1556, 1877, 1879
AclI AACGTT 1 cut(s) 2042
AclWI GGATC 6 cut(s) 551, 680, 728, 1818, 1879, 1892
AcoI YGGCCR 2 cut(s) 3, 1237
AcsI RAATTY 5 cut(s) 652, 1096, 1149, 2027, 2231
AcuI CTGAAG 1 cut(s) 1554
AcyI GRCGYC 2 cut(s) 152, 1156
AfaI GTAC 7 cut(s) 469, 922, 1129, 1144, 1222, 1278, 1839
AfiI CCNNNNNNNGG 4 cut(s) 162, 1003, 1368, 1528
AflII CTTAAG 2 cut(s) 1366, 2126
AjiI CACGTC 2 cut(s) 330, 517
AjnI CCWGG 3 cut(s) 589, 892, 1239
Alw21I GWGCWC 2 cut(s) 1928, 1992
Alw26I GTCTC 2 cut(s) 1361, 2192
AlwI GGATC 6 cut(s) 551, 680, 728, 1818, 1879, 1892
AlwNI CAGNNNCTG 1 cut(s) 1196
AoxI GGCC 4 cut(s) 3, 430, 1237, 1959
ApoI RAATTY 5 cut(s) 652, 1096, 1149, 2027, 2231
AseI ATTAAT 1 cut(s) 771
Asp700I GAANNNNTTC 1 cut(s) 2055
AspLEI GCGC 4 cut(s) 317, 714, 1324, 1509
AspS9I GGNCC 5 cut(s) 211, 587, 1413, 1593, 1960
AsuHPI GGTGA 3 cut(s) 1061, 1351, 1633
AsuII TTCGAA 1 cut(s) 1058
AvaII GGWCC 4 cut(s) 211, 587, 1413, 1593
AxyI CCTNAGG 1 cut(s) 1382
BalI TGGCCA 1 cut(s) 1239
BamHI GGATCC 1 cut(s) 1884
BanII GRGCYC 2 cut(s) 1863, 1992
BauI CACGAG 1 cut(s) 198
BbsI GAAGAC 2 cut(s) 498, 1729
Bbv12I GWGCWC 2 cut(s) 1928, 1992
BccI CCATC 8 cut(s) 127, 279, 407, 1025, 1530, 1978, 2089, 2315
BceAI ACGGC 2 cut(s) 2, 764
BciT130I CCWGG 3 cut(s) 591, 894, 1241
BclI TGATCA 2 cut(s) 169, 2080
BcoDI GTCTC 2 cut(s) 1361, 2192
BfaI CTAG 5 cut(s) 1229, 1802, 1865, 1941, 2060
BfmI CTRYAG 1 cut(s) 803
BfrI CTTAAG 2 cut(s) 1366, 2126
BglII AGATCT 3 cut(s) 1447, 1672, 1699
BmcAI AGTACT 1 cut(s) 1129
Bme1390I CCNGG 3 cut(s) 591, 894, 1241
Bme18I GGWCC 4 cut(s) 211, 587, 1413, 1593
BmgBI CACGTC 2 cut(s) 330, 517
BmgT120I GGNCC 5 cut(s) 211, 587, 1413, 1593, 1960
BmiI GGNNCC 7 cut(s) 267, 598, 756, 889, 1862, 1886, 1950
BmrFI CCNGG 3 cut(s) 591, 894, 1241
BmrI ACTGGG 2 cut(s) 274, 1537
BmsI GCATC 7 cut(s) 127, 229, 1020, 1522, 1547, 2106, 2187
BmuI ACTGGG 2 cut(s) 274, 1537
BoxI GACNNNNGTC 1 cut(s) 969
BpiI GAAGAC 2 cut(s) 498, 1729
BpmI CTGGAG 1 cut(s) 2180
Bpu10I CCTNAGC 1 cut(s) 2121
Bpu14I TTCGAA 1 cut(s) 1058
BpuEI CTTGAG 3 cut(s) 988, 1976, 1985
Bsa29I ATCGAT 1 cut(s) 675
BsaBI GATNNNNATC 3 cut(s) 141, 1809, 2099
BsaHI GRCGYC 2 cut(s) 152, 1156
BsaI GGTCTC 2 cut(s) 1361, 2192
BsaJI CCNNGG 7 cut(s) 6, 892, 893, 1240, 1409, 1656, 1877
BsaXI ACNNNNNCTCC 4 cut(s) 1036, 1066, 1653, 1683
Bsc4I CCNNNNNNNGG 4 cut(s) 162, 1003, 1368, 1528
Bse1I ACTGG 3 cut(s) 280, 1264, 1532
Bse21I CCTNAGG 1 cut(s) 1382
Bse3DI GCAATG 1 cut(s) 2235
Bse8I GATNNNNATC 3 cut(s) 141, 1809, 2099
BseBI CCWGG 3 cut(s) 591, 894, 1241
BseCI ATCGAT 1 cut(s) 675
BseDI CCNNGG 7 cut(s) 6, 892, 893, 1240, 1409, 1656, 1877
BseGI GGATG 8 cut(s) 138, 142, 244, 309, 957, 1537, 1736, 2192
BseJI GATNNNNATC 3 cut(s) 141, 1809, 2099
BseLI CCNNNNNNNGG 4 cut(s) 162, 1003, 1368, 1528
BseMI GCAATG 1 cut(s) 2235
BseMII CTCAG 2 cut(s) 1083, 2319
BseNI ACTGG 3 cut(s) 280, 1264, 1532
BseYI CCCAGC 1 cut(s) 2271
BsgI GTGCAG 1 cut(s) 206
Bsh1236I CGCG 2 cut(s) 8, 1879
BshFI GGCC 4 cut(s) 5, 432, 1239, 1961
BshVI ATCGAT 1 cut(s) 675
BsiHKAI GWGCWC 2 cut(s) 1928, 1992
BsiSI CCGG 1 cut(s) 600
BsiWI CGTACG 1 cut(s) 920
BslFI GGGAC 1 cut(s) 139
BslI CCNNNNNNNGG 4 cut(s) 162, 1003, 1368, 1528
BsmAI GTCTC 2 cut(s) 1361, 2192
BsmFI GGGAC 1 cut(s) 139
BsmI GAATGC 1 cut(s) 1942
BsnI GGCC 4 cut(s) 5, 432, 1239, 1961
Bso31I GGTCTC 2 cut(s) 1361, 2192
Bsp119I TTCGAA 1 cut(s) 1058
Bsp1286I GDGCHC 3 cut(s) 1863, 1928, 1992
Bsp1407I TGTACA 1 cut(s) 1837
BspACI CCGC 8 cut(s) 6, 8, 479, 594, 1261, 1556, 1877, 1879
BspANI GGCC 4 cut(s) 5, 432, 1239, 1961
BspCNI CTCAG 2 cut(s) 1084, 2320
BspDI ATCGAT 1 cut(s) 675
BspFNI CGCG 2 cut(s) 8, 1879
BspHI TCATGA 1 cut(s) 615
BspLI GGNNCC 7 cut(s) 267, 598, 756, 889, 1862, 1886, 1950
BspMAI CTGCAG 1 cut(s) 807
BspPI GGATC 6 cut(s) 551, 680, 728, 1818, 1879, 1892
BspT104I TTCGAA 1 cut(s) 1058
BspTI CTTAAG 2 cut(s) 1366, 2126
BspTNI GGTCTC 2 cut(s) 1361, 2192
BsrDI GCAATG 1 cut(s) 2235
BsrGI TGTACA 1 cut(s) 1837
BsrI ACTGG 3 cut(s) 280, 1264, 1532
BssECI CCNNGG 7 cut(s) 6, 892, 893, 1240, 1409, 1656, 1877
BssNAI GTATAC 1 cut(s) 285
BssNI GRCGYC 2 cut(s) 152, 1156
BssSI CACGAG 1 cut(s) 198
BssT1I CCWWGG 2 cut(s) 1409, 1656
Bst1107I GTATAC 1 cut(s) 285
Bst2BI CACGAG 1 cut(s) 198
Bst2UI CCWGG 3 cut(s) 591, 894, 1241
Bst4CI ACNGT 4 cut(s) 543, 1127, 1593, 2208
BstACI GRCGYC 2 cut(s) 152, 1156
BstAFI CTTAAG 2 cut(s) 1366, 2126
BstAUI TGTACA 1 cut(s) 1837
BstBI TTCGAA 1 cut(s) 1058
BstC8I GCNNGC 2 cut(s) 55, 455
BstDSI CCRYGG 2 cut(s) 6, 1877
BstF5I GGATG 8 cut(s) 138, 142, 244, 309, 957, 1537, 1736, 2192
BstFNI CGCG 2 cut(s) 8, 1879
BstHHI GCGC 4 cut(s) 317, 714, 1324, 1509
BstMAI GTCTC 2 cut(s) 1361, 2192
BstMWI GCNNNNNNNGC 7 cut(s) 14, 23, 32, 600, 1017, 1321, 2131
BstNI CCWGG 3 cut(s) 591, 894, 1241
BstNSI RCATGY 2 cut(s) 995, 2224
BstPAI GACNNNNGTC 1 cut(s) 969
BstSCI CCNGG 3 cut(s) 589, 892, 1239
BstSFI CTRYAG 1 cut(s) 803
BstUI CGCG 2 cut(s) 8, 1879
BstV2I GAAGAC 2 cut(s) 498, 1729
BstX2I RGATCY 5 cut(s) 556, 1447, 1672, 1699, 1884
BstXI CCANNNNNNTGG 1 cut(s) 461
BstYI RGATCY 5 cut(s) 556, 1447, 1672, 1699, 1884
BstZ17I GTATAC 1 cut(s) 285
Bsu15I ATCGAT 1 cut(s) 675
Bsu36I CCTNAGG 1 cut(s) 1382
BsuRI GGCC 4 cut(s) 5, 432, 1239, 1961
BsuTUI ATCGAT 1 cut(s) 675
BtgI CCRYGG 2 cut(s) 6, 1877
BtgZI GCGATG 1 cut(s) 2129
BtrI CACGTC 2 cut(s) 330, 517
BtsCI GGATG 8 cut(s) 138, 142, 244, 309, 957, 1537, 1736, 2192
BtsI GCAGTG 1 cut(s) 875
BtsIMutI CAGTG 3 cut(s) 875, 1525, 2325
Cac8I GCNNGC 2 cut(s) 55, 455
CaiI CAGNNNCTG 1 cut(s) 1196
CciI TCATGA 1 cut(s) 615
CfoI GCGC 4 cut(s) 317, 714, 1324, 1509
Cfr13I GGNCC 5 cut(s) 211, 587, 1413, 1593, 1960
Cfr42I CCGCGG 2 cut(s) 9, 1880
ClaI ATCGAT 1 cut(s) 675
CseI GACGC 4 cut(s) 554, 674, 1164, 2295
Csp6I GTAC 7 cut(s) 468, 921, 1128, 1143, 1221, 1277, 1838
CviAII CATG 8 cut(s) 89, 461, 616, 718, 962, 992, 1765, 2221
CviQI GTAC 7 cut(s) 468, 921, 1128, 1143, 1221, 1277, 1838
DraI TTTAAA 2 cut(s) 1299, 2047
EaeI YGGCCR 2 cut(s) 3, 1237
EciI GGCGGA 1 cut(s) 1250
Ecl136II GAGCTC 1 cut(s) 1990
Eco130I CCWWGG 2 cut(s) 1409, 1656
Eco24I GRGCYC 2 cut(s) 1863, 1992
Eco31I GGTCTC 2 cut(s) 1361, 2192
Eco47I GGWCC 4 cut(s) 211, 587, 1413, 1593
Eco53kI GAGCTC 1 cut(s) 1990
Eco57I CTGAAG 1 cut(s) 1554
Eco81I CCTNAGG 1 cut(s) 1382
EcoICRI GAGCTC 1 cut(s) 1990
EcoO109I RGGNCCY 2 cut(s) 587, 1960
EcoRII CCWGG 3 cut(s) 589, 892, 1239
EcoT14I CCWWGG 2 cut(s) 1409, 1656
EcoT38I GRGCYC 2 cut(s) 1863, 1992
ErhI CCWWGG 2 cut(s) 1409, 1656
FaeI CATG 8 cut(s) 92, 464, 619, 721, 965, 995, 1768, 2224
FalI AAGNNNNNCTT 4 cut(s) 174, 206, 1686, 1718
FaqI GGGAC 1 cut(s) 139
FatI CATG 8 cut(s) 88, 460, 615, 717, 961, 991, 1764, 2220
FauI CCCGC 1 cut(s) 486
FauNDI CATATG 2 cut(s) 1201, 1815
FbaI TGATCA 2 cut(s) 169, 2080
FblI GTMKAC 3 cut(s) 63, 284, 1846
FokI GGATG 8 cut(s) 145, 149, 251, 316, 944, 1544, 1723, 2179
FriOI GRGCYC 2 cut(s) 1863, 1992
FspBI CTAG 5 cut(s) 1229, 1802, 1865, 1941, 2060
FspI TGCGCA 1 cut(s) 713
GlaI GCGC 4 cut(s) 316, 713, 1323, 1508
GsaI CCCAGC 1 cut(s) 2275
GsuI CTGGAG 1 cut(s) 2180
HaeIII GGCC 4 cut(s) 5, 432, 1239, 1961
HapII CCGG 1 cut(s) 600
HgaI GACGC 4 cut(s) 554, 674, 1164, 2295
HhaI GCGC 4 cut(s) 317, 714, 1324, 1509
Hin1I GRCGYC 2 cut(s) 152, 1156
Hin1II CATG 8 cut(s) 92, 464, 619, 721, 965, 995, 1768, 2224
Hin6I GCGC 4 cut(s) 315, 712, 1322, 1507
HinP1I GCGC 4 cut(s) 315, 712, 1322, 1507
HincII GTYRAC 1 cut(s) 64
HindII GTYRAC 1 cut(s) 64
HindIII AAGCTT 4 cut(s) 55, 1424, 1892, 2123
HinfI GANTC 8 cut(s) 417, 860, 970, 1060, 1136, 1431, 1820, 1967
HpaII CCGG 1 cut(s) 600
HphI GGTGA 3 cut(s) 1061, 1351, 1633
Hpy166II GTNNAC 7 cut(s) 64, 255, 285, 628, 1069, 1493, 1847
Hpy188I TCNGA 7 cut(s) 215, 364, 570, 928, 1746, 1983, 2011
Hpy8I GTNNAC 7 cut(s) 64, 255, 285, 628, 1069, 1493, 1847
Hpy99I CGWCG 4 cut(s) 65, 154, 1158, 2289
HpyAV CCTTC 5 cut(s) 40, 422, 755, 1850, 2006
HpyCH4III ACNGT 4 cut(s) 543, 1127, 1593, 2208
HpyCH4IV ACGT 6 cut(s) 152, 329, 516, 923, 1843, 2042
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 23, 32, 600, 1017, 1321, 2131
HpySE526I ACGT 6 cut(s) 152, 329, 516, 923, 1843, 2042
Hsp92I GRCGYC 2 cut(s) 152, 1156
Hsp92II CATG 8 cut(s) 92, 464, 619, 721, 965, 995, 1768, 2224
HspAI GCGC 4 cut(s) 315, 712, 1322, 1507
Ksp22I TGATCA 2 cut(s) 169, 2080
KspI CCGCGG 2 cut(s) 9, 1880
LmnI GCTCC 3 cut(s) 602, 1866, 1987
LweI GCATC 7 cut(s) 127, 229, 1020, 1522, 1547, 2106, 2187
MaeI CTAG 5 cut(s) 1229, 1802, 1865, 1941, 2060
MaeII ACGT 6 cut(s) 152, 329, 516, 923, 1843, 2042
MaeIII GTNAC 3 cut(s) 347, 845, 1608
MboII GAAGA 5 cut(s) 503, 1342, 1560, 1727, 1734
MflI RGATCY 5 cut(s) 556, 1447, 1672, 1699, 1884
MhlI GDGCHC 3 cut(s) 1863, 1928, 1992
MlsI TGGCCA 1 cut(s) 1239
MluNI TGGCCA 1 cut(s) 1239
MlyI GAGTC 4 cut(s) 411, 869, 979, 1976
Mox20I TGGCCA 1 cut(s) 1239
MroXI GAANNNNTTC 1 cut(s) 2055
MscI TGGCCA 1 cut(s) 1239
MslI CAYNNNNRTG 3 cut(s) 93, 614, 1530
Msp20I TGGCCA 1 cut(s) 1239
MspA1I CMGCKG 3 cut(s) 8, 1879, 2271
MspCI CTTAAG 2 cut(s) 1366, 2126
MspI CCGG 1 cut(s) 600
MspR9I CCNGG 3 cut(s) 591, 894, 1241
Mva1269I GAATGC 1 cut(s) 1942
MvaI CCWGG 3 cut(s) 591, 894, 1241
MvnI CGCG 2 cut(s) 8, 1879
MwoI GCNNNNNNNGC 7 cut(s) 14, 23, 32, 600, 1017, 1321, 2131
NdeI CATATG 2 cut(s) 1201, 1815
NlaIII CATG 8 cut(s) 92, 464, 619, 721, 965, 995, 1768, 2224
NlaIV GGNNCC 7 cut(s) 267, 598, 756, 889, 1862, 1886, 1950
NmeAIII GCCGAG 1 cut(s) 689
NmuCI GTSAC 1 cut(s) 1608
NsbI TGCGCA 1 cut(s) 713
NspI RCATGY 2 cut(s) 995, 2224
NspV TTCGAA 1 cut(s) 1058
PagI TCATGA 1 cut(s) 615
PasI CCCWGGG 1 cut(s) 893
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PctI GAATGC 1 cut(s) 1942
PdmI GAANNNNTTC 1 cut(s) 2055
PfeI GAWTC 4 cut(s) 1060, 1136, 1431, 1820
Pfl23II CGTACG 1 cut(s) 920
PleI GAGTC 4 cut(s) 411, 868, 978, 1975
PpsI GAGTC 4 cut(s) 411, 868, 978, 1975
PpuMI RGGWCCY 1 cut(s) 587
PshAI GACNNNNGTC 1 cut(s) 969
PshBI ATTAAT 1 cut(s) 771
Psp124BI GAGCTC 1 cut(s) 1992
Psp1406I AACGTT 1 cut(s) 2042
Psp5II RGGWCCY 1 cut(s) 587
Psp6I CCWGG 3 cut(s) 589, 892, 1239
PspFI CCCAGC 1 cut(s) 2271
PspGI CCWGG 3 cut(s) 589, 892, 1239
PspLI CGTACG 1 cut(s) 920
PspN4I GGNNCC 7 cut(s) 267, 598, 756, 889, 1862, 1886, 1950
PspPI GGNCC 5 cut(s) 211, 587, 1413, 1593, 1960
PspPPI RGGWCCY 1 cut(s) 587
PstI CTGCAG 1 cut(s) 807
PstNI CAGNNNCTG 1 cut(s) 1196
PsuI RGATCY 5 cut(s) 556, 1447, 1672, 1699, 1884
PvuII CAGCTG 1 cut(s) 2271
RsaI GTAC 7 cut(s) 469, 922, 1129, 1144, 1222, 1278, 1839
RsaNI GTAC 7 cut(s) 468, 921, 1128, 1143, 1221, 1277, 1838
RseI CAYNNNNRTG 3 cut(s) 93, 614, 1530
SacI GAGCTC 1 cut(s) 1992
SacII CCGCGG 2 cut(s) 9, 1880
SalI GTCGAC 1 cut(s) 62
Sau96I GGNCC 5 cut(s) 211, 587, 1413, 1593, 1960
ScaI AGTACT 1 cut(s) 1129
SchI GAGTC 4 cut(s) 411, 869, 979, 1976
ScrFI CCNGG 3 cut(s) 591, 894, 1241
SduI GDGCHC 3 cut(s) 1863, 1928, 1992
SfaNI GCATC 7 cut(s) 127, 229, 1020, 1522, 1547, 2106, 2187
SfcI CTRYAG 1 cut(s) 803
Sfr303I CCGCGG 2 cut(s) 9, 1880
SfuI TTCGAA 1 cut(s) 1058
SgrBI CCGCGG 2 cut(s) 9, 1880
SinI GGWCC 4 cut(s) 211, 587, 1413, 1593
SmiMI CAYNNNNRTG 3 cut(s) 93, 614, 1530
SmlI CTYRAG 5 cut(s) 967, 1366, 1955, 1964, 2126
SmoI CTYRAG 5 cut(s) 967, 1366, 1955, 1964, 2126
SsiI CCGC 8 cut(s) 6, 8, 479, 594, 1261, 1556, 1877, 1879
SspI AATATT 1 cut(s) 1579
SspMI CTAG 5 cut(s) 1229, 1802, 1865, 1941, 2060
SstI GAGCTC 1 cut(s) 1992
StyD4I CCNGG 3 cut(s) 589, 892, 1239
StyI CCWWGG 2 cut(s) 1409, 1656
TaaI ACNGT 4 cut(s) 543, 1127, 1593, 2208
TaiI ACGT 6 cut(s) 155, 332, 519, 926, 1846, 2045
TaqII GACCGA 1 cut(s) 1343
TatI WGTACW 3 cut(s) 1127, 1276, 1837
TauI GCSGC 3 cut(s) 8, 597, 1879
TfiI GAWTC 4 cut(s) 1060, 1136, 1431, 1820
TscAI CASTG 3 cut(s) 882, 1532, 2332
TseFI GTSAC 1 cut(s) 1608
Tsp45I GTSAC 1 cut(s) 1608
TspDTI ATGAA 7 cut(s) 215, 513, 563, 1066, 1725, 1766, 2224
TspGWI ACGGA 2 cut(s) 83, 178
TspRI CASTG 3 cut(s) 882, 1532, 2332
Vha464I CTTAAG 2 cut(s) 1366, 2126
VpaK11BI GGWCC 4 cut(s) 211, 587, 1413, 1593
VspI ATTAAT 1 cut(s) 771
XapI RAATTY 5 cut(s) 652, 1096, 1149, 2027, 2231
XbaI TCTAGA 1 cut(s) 1801
XceI RCATGY 2 cut(s) 995, 2224
XcmI CCANNNNNNNNNTGG 1 cut(s) 296
XmiI GTMKAC 3 cut(s) 63, 284, 1846
XmnI GAANNNNTTC 1 cut(s) 2055
XspI CTAG 5 cut(s) 1229, 1802, 1865, 1941, 2060
ZraI GACGTC 1 cut(s) 153
ZrmI AGTACT 1 cut(s) 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.