Rh2BG331500

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
43699330 .. 43702089
2760 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG331500.1

Sequence Viewer

Length: 2760 bp
ATGGCTGAAATTGCAATTTCTGCCATTTCTCTCGCATTGGCGATATTTGGCACAGTGGAAGCACTCTACCAAAAACACAATGACGGTTCAACTAATGTCACTGTTCGCCGAACAGAGGTTTGGTTGAAGGAAATCCAAATGGTTCTAAGGGACGCAGAAGATCAGATTGAAGGAGCGTCCAACCAGCTTCAACAATCTGTGAAAGATGTCGAATATATAGCTTATGAAATTGAGGATGCTCTTTCCGAGTTTGTGCTTAACGTCCACGGCAACAGAGGATTATCTCGGAAAGTGCACGACATGATTCCATTTCTCCCACGAAATGAAGTAAAGAACGCAGCCAGAAATTTGTCGTCCAAGATAAGTCACATTATGGGGGAGAAGAAAGAGAGTGTTGATAAGCTAGTAACAATGCTCCGACAAATTAGCTCCAGCTCCAGACGGATACATACATGGCCTCACCAAGTTCTTGCAGAAGGTGATGAAATAGTGGGATTTAAGACACGTGAAGACGAACTGGTTAAACAGTTGGCACCAGACGACGCCCGTTTGACGATTTTGATTGCAGGTCCTGGTGGCTCGGGTAAAAGCACTGTGGTACAGAATGTATACCGGAGCGACAGGATCAGACGACGTGAAGAAGGTTCTGGGCCTTTTGGCTGCTATGCTTGGGTTCATGTGCTAAACATGGAAGTGGAGATGCTCTTATTAAAGATGTTAAGAGAATTTGAGGCCCAAAGGCAGGAAGCATATCCAGAAACTCCGACGACAGTTCTCCAGGAAGAAGATGATTCAAAAGAAAAGCTGGCGCTACTTCTACAGCGAGATAGGTTCCTAGTTGTTTTAGATAATGTTTGGAGCAGAGACGATTTGGAACGGATCGTAAGTGCCTTACCAAAAGGATTGCCTGGGAGTAAGATAATCATTACTACGCGTAACTCTGATGTAACATCTGTTGCCCCCGACTATATCCATGATTTGAGTAGTGGGTTATCATCAGAGGAAGCCCAGGAGCTGTTTTGCAAGAAGGCTTTTCAAGCTAGTGATGGACAGTTGCCACATATTCTAGAGGAGTGGGCTCAAAAAATACTCAAAAGGTGTGAAGGCATGCCCCTTCCAATTTCAGCCATTGGTAATTTGCTTGCCAAGAAGCCACAAACTCCAGTTCAGTGGAAGAGGCTACATGACAGACTTAGATATGAAATATGTAGACACGGCTCAGATCTTTCTGTTATTAGCCGTAATTTACAGCCGAGTTATAGGGATCTCCCAAGCCATCTTAAAAGTTGTTTCTTGTACTTCAGCATGTTTCCTGAAGACTACTCTATCAGCCGTGAGAGGCTAATTCGATTGTGGGTGGCCGAAGGATTCGTAGGGCCACAAGAAGGAGAACCAAAGGAGAAGGCTGCAGGCGAGTTTCTGGATGAACTTTTTAAAAGAAATTTGGTTGTAGCCAGCACCAGGGATGTGGATGGACGACGAGTAAGGAGATGCCGTGTTTTGCACCTAGTTCGAGAGATCAACATTTCTAGACAAAATAGTTTCTTAACTGTTTTGGAACGAAACTACAATCCTTCAGCTGACAGTATTCGACGCCTTTCTCTTAATAATGGTCCTGTCGAAAAGATAAGGGGTATGACTAGTGGTATTCGTACCTTACTAGTGTTCGGACATGCAACTTCTCTTTCTGAGCTTGAAATGATACTCAAAACTGGTAAGTATTTAAGTGTTTTAGATTTGCAAGGTGTAGCTTTGAAGGAGTTTCCCGAACATGTACTTGGTCTCACTCTCCTCAAGTACTTGAGTCTGAAGAAAACCCAAATTAAAACAGTTCCCCAATCCATAAAGAAGCTTGTATACTTAGAAACCTTGGATGTTAGGCACACCAGTGTGAGCTATTTACCAAATGAGATCTGGAAACTTGAAATGTTGCGCCACCTCCTGGTTTTTTGCAAAGATGGGGGAAGTGGAGGAGTGGTTCTTTCTGCTAGTAATCTTGGAGCTCTATCTTCCATACAAACGTTGTCACTCATCAAGGTAGAAACCACGAGTGAAATCAGGACAGCTTTGGAAATGTTAGCTGGTCTCAGCAAGTTGGGGCTGACAGATCTCAAAAGAGAAGATGGGGAACAATTGTGTGGTTCAATTCAGAAAATGCAGGATCTTTCCAAACTTGATGTAAGAGCAATAAGCAAGGACGAGTATCTTGATTTGGATCATATGACATTCCCTCTTGTGGCTCCTCTATATCTTCAACGTCTATATTTGGAAGGACAGCTAGAAAGGGTACCGCGGTGGATATCTGAGCTTACTAGTCTAACAAAGATCGGTTTAAAGTGGTCAAAACTGAAGGCTAGAGATGATCCACTTCAAGCCCTTCAAGCTTTGCCTAATCTGATGGAGCTCAATTTGATTGACTATTACACAGGGGAGGAGTTGACTTTTAAAGCTCAGACGTTCAAGAAACTAATGGTATTAATCATAGAACAATTTGATGAGCTAAAGGTAGTGAAAATTGAAGATGGGGCAATGCCTCAGCTTAAGCGGTTAACCATGTGCAAGTGTCAGAATTTGAAGTCACTTCCAGAAGGAGTGGCAGGTCTTAATGCATTTGAAGAAATCAGATGGAATGAGATGCCCGATGAATTCACTACAATGGTTCAAGAACGTTGTTTCAGCATATTCGAGTCATCCATTCTTAGAGATCTTCCGAAATCGGAATATTTTTCATTGCAGAAACACAAGGTGATTATGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

919

Amino Acids

104.51

Weight (kDa)

6.88

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 42 - 92 5.2e-06 Rx N-terminal domain
NB-ARC PF00931 169 - 349 3.8e-26 NB-ARC domain
WHD_DRP PF23559 436 - 506 1.2e-15 Disease resistance protein Winged helix domain
LRR_14 PF23598 550 - 859 1.3e-40 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 557, 2588
Acc65I GGTACC 1 cut(s) 2287
AccB1I GGYRCC 2 cut(s) 532, 2287
AccB7I CCANNNNNTGG 1 cut(s) 1942
AccI GTMKAC 3 cut(s) 609, 1210, 1857
AccII CGCG 2 cut(s) 934, 2293
AciI CCGC 3 cut(s) 2291, 2293, 2545
AclI AACGTT 2 cut(s) 2021, 2668
AclWI GGATC 6 cut(s) 632, 887, 1272, 2169, 2223, 2357
AcoI YGGCCR 1 cut(s) 1359
AcsI RAATTY 5 cut(s) 346, 725, 1441, 2569, 2645
AcuI CTGAAG 5 cut(s) 1285, 1335, 1560, 1829, 2369
AcvI CACGTG 1 cut(s) 506
AcyI GRCGYC 2 cut(s) 543, 1594
AdeI CACNNNGTG 1 cut(s) 2746
AfaI GTAC 6 cut(s) 600, 1298, 1654, 1776, 1799, 2289
AfiI CCNNNNNNNGG 6 cut(s) 115, 742, 1385, 1461, 1942, 2236
AflII CTTAAG 1 cut(s) 2540
AflIII ACRYGT 3 cut(s) 503, 932, 1771
AhlI ACTAGT 3 cut(s) 1640, 1660, 2312
AjiI CACGTC 1 cut(s) 635
AjnI CCWGG 6 cut(s) 571, 777, 907, 1008, 1460, 1941
AjuI GAANNNNNNNTTGG 4 cut(s) 103, 135, 1761, 1793
AleI CACNNNNGTG 2 cut(s) 1887, 1889
AloI GAACNNNNNNTCC 2 cut(s) 1962, 1994
Alw21I GWGCWC 3 cut(s) 297, 2005, 2406
Alw26I GTCTC 3 cut(s) 858, 1787, 2090
Alw44I GTGCAC 1 cut(s) 293
AlwI GGATC 6 cut(s) 632, 887, 1272, 2169, 2223, 2357
AlwNI CAGNNNCTG 2 cut(s) 572, 1015
Ama87I CYCGRG 1 cut(s) 580
AoxI GGCC 5 cut(s) 455, 650, 732, 1359, 1376
ApaLI GTGCAC 1 cut(s) 293
ApeKI GCWGC 3 cut(s) 338, 660, 1406
ApoI RAATTY 5 cut(s) 346, 725, 1441, 2569, 2645
AseI ATTAAT 1 cut(s) 2477
Asp718I GGTACC 1 cut(s) 2287
AspLEI GCGC 2 cut(s) 811, 1935
AspS9I GGNCC 5 cut(s) 569, 650, 733, 1376, 1613
AsuHPI GGTGA 3 cut(s) 452, 491, 2758
AvaI CYCGRG 1 cut(s) 580
AvaII GGWCC 2 cut(s) 569, 1613
BaeGI GKGCMC 1 cut(s) 297
BaeI ACNNNNGTAYC 2 cut(s) 2279, 2312
BanI GGYRCC 2 cut(s) 532, 2287
BanII GRGCYC 3 cut(s) 1081, 2005, 2406
BarI GAAGNNNNNNTAC 2 cut(s) 1841, 1873
BauI CACGAG 1 cut(s) 2047
BbrPI CACGTG 1 cut(s) 506
BbsI GAAGAC 2 cut(s) 516, 1323
Bbv12I GWGCWC 3 cut(s) 297, 2005, 2406
BbvCI CCTCAGC 1 cut(s) 2535
BbvI GCAGC 3 cut(s) 350, 647, 1393
BccI CCATC 8 cut(s) 1040, 1284, 1466, 1952, 2117, 2392, 2516, 2619
BceAI ACGGC 5 cut(s) 283, 1224, 1231, 1317, 1479
BcgI CGANNNNNNTGC 2 cut(s) 1493, 1527
BciT130I CCWGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
BciVI GTATCC 1 cut(s) 438
BcoDI GTCTC 3 cut(s) 858, 1787, 2090
BcuI ACTAGT 3 cut(s) 1640, 1660, 2312
BfmI CTRYAG 2 cut(s) 818, 1407
BfoI RGCGCY 1 cut(s) 812
BfrI CTTAAG 1 cut(s) 2540
BfuAI ACCTGC 2 cut(s) 557, 2588
BfuI GTATCC 1 cut(s) 438
BglII AGATCT 4 cut(s) 1222, 1911, 2107, 2704
BisI GCNGC 3 cut(s) 339, 661, 1407
BlsI GCNGC 3 cut(s) 340, 662, 1408
BmcAI AGTACT 1 cut(s) 1799
Bme1390I CCNGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
Bme18I GGWCC 2 cut(s) 569, 1613
BmeT110I CYCGRG 1 cut(s) 580
BmgBI CACGTC 1 cut(s) 635
BmgT120I GGNCC 5 cut(s) 569, 650, 733, 1376, 1613
BmiI GGNNCC 4 cut(s) 534, 833, 2241, 2289
BmrFI CCNGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
BmsI GCATC 4 cut(s) 226, 690, 1481, 2625
BpiI GAAGAC 2 cut(s) 516, 1323
BpmI CTGGAG 4 cut(s) 415, 421, 761, 1146
Bpu10I CCTNAGC 1 cut(s) 2535
BpuEI CTTGAG 2 cut(s) 1778, 1822
BsaAI YACGTR 1 cut(s) 506
BsaBI GATNNNNATC 1 cut(s) 2214
BsaHI GRCGYC 2 cut(s) 543, 1594
BsaI GGTCTC 2 cut(s) 1787, 2090
BsaJI CCNNGG 6 cut(s) 265, 908, 1008, 1461, 1869, 2291
BsaWI WCCGGW 1 cut(s) 612
BsaXI ACNNNNNCTCC 4 cut(s) 1480, 1510, 1962, 1992
Bsc4I CCNNNNNNNGG 6 cut(s) 115, 742, 1385, 1461, 1942, 2236
Bse1I ACTGG 4 cut(s) 522, 1163, 1717, 1887
Bse3DI GCAATG 2 cut(s) 2535, 2729
Bse8I GATNNNNATC 1 cut(s) 2214
BseBI CCWGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
BseDI CCNNGG 6 cut(s) 265, 908, 1008, 1461, 1869, 2291
BseGI GGATG 6 cut(s) 241, 1429, 1471, 1477, 1879, 2690
BseJI GATNNNNATC 1 cut(s) 2214
BseLI CCNNNNNNNGG 6 cut(s) 115, 742, 1385, 1461, 1942, 2236
BseMI GCAATG 2 cut(s) 2535, 2729
BseMII CTCAG 6 cut(s) 1233, 1680, 2101, 2295, 2465, 2549
BseNI ACTGG 4 cut(s) 522, 1163, 1717, 1887
BseRI GAGGAG 5 cut(s) 1085, 1781, 1986, 2232, 2447
BseSI GKGCMC 1 cut(s) 297
BseXI GCAGC 3 cut(s) 350, 647, 1393
Bsh1236I CGCG 2 cut(s) 934, 2293
BshFI GGCC 5 cut(s) 457, 652, 734, 1361, 1378
BshNI GGYRCC 2 cut(s) 532, 2287
BsiHKAI GWGCWC 3 cut(s) 297, 2005, 2406
BsiHKCI CYCGRG 1 cut(s) 580
BsiSI CCGG 1 cut(s) 613
BslFI GGGAC 1 cut(s) 164
BslI CCNNNNNNNGG 6 cut(s) 115, 742, 1385, 1461, 1942, 2236
BsmAI GTCTC 3 cut(s) 858, 1787, 2090
BsmBI CGTCTC 1 cut(s) 858
BsmFI GGGAC 1 cut(s) 164
BsnI GGCC 5 cut(s) 457, 652, 734, 1361, 1378
Bso31I GGTCTC 2 cut(s) 1787, 2090
BsoBI CYCGRG 1 cut(s) 580
Bsp1286I GDGCHC 4 cut(s) 297, 1081, 2005, 2406
BspACI CCGC 3 cut(s) 2291, 2293, 2545
BspANI GGCC 5 cut(s) 457, 652, 734, 1361, 1378
BspCNI CTCAG 6 cut(s) 1232, 1681, 2100, 2296, 2464, 2548
BspFNI CGCG 2 cut(s) 934, 2293
BspLI GGNNCC 4 cut(s) 534, 833, 2241, 2289
BspMAI CTGCAG 1 cut(s) 1411
BspMI ACCTGC 2 cut(s) 557, 2588
BspPI GGATC 6 cut(s) 632, 887, 1272, 2169, 2223, 2357
BspT107I GGYRCC 2 cut(s) 532, 2287
BspTI CTTAAG 1 cut(s) 2540
BspTNI GGTCTC 2 cut(s) 1787, 2090
BsrDI GCAATG 2 cut(s) 2535, 2729
BsrI ACTGG 4 cut(s) 522, 1163, 1717, 1887
BssECI CCNNGG 6 cut(s) 265, 908, 1008, 1461, 1869, 2291
BssNAI GTATAC 2 cut(s) 610, 1858
BssNI GRCGYC 2 cut(s) 543, 1594
BssSI CACGAG 1 cut(s) 2047
BssT1I CCWWGG 1 cut(s) 1869
Bst1107I GTATAC 2 cut(s) 610, 1858
Bst2BI CACGAG 1 cut(s) 2047
Bst2UI CCWGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
Bst6I CTCTTC 1 cut(s) 1169
BstACI GRCGYC 2 cut(s) 543, 1594
BstAFI CTTAAG 1 cut(s) 2540
BstAPI GCANNNNNTGC 1 cut(s) 20
BstBAI YACGTR 1 cut(s) 506
BstC8I GCNNGC 5 cut(s) 807, 1109, 1143, 1411, 1456
BstDSI CCRYGG 2 cut(s) 265, 2291
BstF5I GGATG 6 cut(s) 241, 1429, 1471, 1477, 1879, 2690
BstFNI CGCG 2 cut(s) 934, 2293
BstH2I RGCGCY 1 cut(s) 812
BstHHI GCGC 2 cut(s) 811, 1935
BstMAI GTCTC 3 cut(s) 858, 1787, 2090
BstMWI GCNNNNNNNGC 4 cut(s) 11, 20, 1037, 2381
BstNI CCWGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
BstNSI RCATGY 4 cut(s) 1111, 1309, 1676, 1775
BstSCI CCNGG 6 cut(s) 571, 777, 907, 1008, 1460, 1941
BstSFI CTRYAG 2 cut(s) 818, 1407
BstSLI GKGCMC 1 cut(s) 297
BstUI CGCG 2 cut(s) 934, 2293
BstV1I GCAGC 3 cut(s) 350, 647, 1393
BstV2I GAAGAC 2 cut(s) 516, 1323
BstX2I RGATCY 6 cut(s) 1222, 1264, 1911, 2107, 2161, 2704
BstXI CCANNNNNNTGG 2 cut(s) 1170, 1468
BstYI RGATCY 6 cut(s) 1222, 1264, 1911, 2107, 2161, 2704
BstZ17I GTATAC 2 cut(s) 610, 1858
BsuI GTATCC 1 cut(s) 438
BsuRI GGCC 5 cut(s) 457, 652, 734, 1361, 1378
BtgI CCRYGG 2 cut(s) 265, 2291
BtrI CACGTC 1 cut(s) 635
BtsCI GGATG 6 cut(s) 241, 1429, 1471, 1477, 1879, 2690
BtsIMutI CAGTG 5 cut(s) 60, 99, 591, 1175, 1894
BveI ACCTGC 2 cut(s) 557, 2588
Cac8I GCNNGC 5 cut(s) 807, 1109, 1143, 1411, 1456
CaiI CAGNNNCTG 2 cut(s) 572, 1015
CfoI GCGC 2 cut(s) 811, 1935
Cfr13I GGNCC 5 cut(s) 569, 650, 733, 1376, 1613
Cfr42I CCGCGG 1 cut(s) 2294
CseI GACGC 4 cut(s) 161, 165, 551, 1602
Csp6I GTAC 6 cut(s) 599, 1297, 1653, 1775, 1798, 2288
CviQI GTAC 6 cut(s) 599, 1297, 1653, 1775, 1798, 2288
DraI TTTAAA 3 cut(s) 1435, 2334, 2446
DraIII CACNNNGTG 1 cut(s) 2746
EaeI YGGCCR 1 cut(s) 1359
Eam1104I CTCTTC 1 cut(s) 1169
EarI CTCTTC 1 cut(s) 1169
Ecl136II GAGCTC 2 cut(s) 2003, 2404
Eco130I CCWWGG 1 cut(s) 1869
Eco24I GRGCYC 3 cut(s) 1081, 2005, 2406
Eco31I GGTCTC 2 cut(s) 1787, 2090
Eco32I GATATC 1 cut(s) 2301
Eco47I GGWCC 2 cut(s) 569, 1613
Eco53kI GAGCTC 2 cut(s) 2003, 2404
Eco57I CTGAAG 5 cut(s) 1285, 1335, 1560, 1829, 2369
Eco72I CACGTG 1 cut(s) 506
Eco88I CYCGRG 1 cut(s) 580
EcoICRI GAGCTC 2 cut(s) 2003, 2404
EcoO109I RGGNCCY 1 cut(s) 569
EcoRI GAATTC 1 cut(s) 2645
EcoRII CCWGG 6 cut(s) 571, 777, 907, 1008, 1460, 1941
EcoRV GATATC 1 cut(s) 2301
EcoT14I CCWWGG 1 cut(s) 1869
EcoT22I ATGCAT 2 cut(s) 2611, 2757
EcoT38I GRGCYC 3 cut(s) 1081, 2005, 2406
ErhI CCWWGG 1 cut(s) 1869
Esp3I CGTCTC 1 cut(s) 858
FaqI GGGAC 1 cut(s) 164
FauNDI CATATG 1 cut(s) 2220
FblI GTMKAC 3 cut(s) 609, 1210, 1857
Fnu4HI GCNGC 3 cut(s) 339, 661, 1407
FokI GGATG 6 cut(s) 248, 1436, 1478, 1484, 1886, 2677
FriOI GRGCYC 3 cut(s) 1081, 2005, 2406
Fsp4HI GCNGC 3 cut(s) 339, 661, 1407
GlaI GCGC 2 cut(s) 810, 1934
GluI GCNGC 3 cut(s) 339, 661, 1407
GsuI CTGGAG 4 cut(s) 415, 421, 761, 1146
HaeII RGCGCY 1 cut(s) 812
HaeIII GGCC 5 cut(s) 457, 652, 734, 1361, 1378
HapII CCGG 1 cut(s) 613
HgaI GACGC 4 cut(s) 161, 165, 551, 1602
HhaI GCGC 2 cut(s) 811, 1935
Hin1I GRCGYC 2 cut(s) 543, 1594
Hin6I GCGC 2 cut(s) 809, 1933
HinP1I GCGC 2 cut(s) 809, 1933
HincII GTYRAC 2 cut(s) 2439, 2550
HindII GTYRAC 2 cut(s) 2439, 2550
HindIII AAGCTT 2 cut(s) 1850, 2382
HinfI GANTC 5 cut(s) 304, 791, 1368, 1804, 2687
HpaI GTTAAC 1 cut(s) 2550
HpaII CCGG 1 cut(s) 613
HphI GGTGA 3 cut(s) 452, 491, 2758
Hpy166II GTNNAC 7 cut(s) 265, 295, 610, 1211, 1858, 2439, 2550
Hpy8I GTNNAC 7 cut(s) 265, 295, 610, 1211, 1858, 2439, 2550
Hpy99I CGWCG 5 cut(s) 545, 636, 769, 1482, 1596
HpyCH4IV ACGT 7 cut(s) 261, 505, 634, 2021, 2257, 2456, 2668
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 20, 1037, 2381
HpySE526I ACGT 7 cut(s) 261, 505, 634, 2021, 2257, 2456, 2668
Hsp92I GRCGYC 2 cut(s) 543, 1594
HspAI GCGC 2 cut(s) 809, 1933
KpnI GGTACC 1 cut(s) 2291
KspAI GTTAAC 1 cut(s) 2550
KspI CCGCGG 1 cut(s) 2294
Lsp1109I GCAGC 3 cut(s) 350, 647, 1393
LweI GCATC 4 cut(s) 226, 690, 1481, 2625
MaeII ACGT 7 cut(s) 261, 505, 634, 2021, 2257, 2456, 2668
MaeIII GTNAC 7 cut(s) 97, 365, 406, 935, 946, 2025, 2577
MfeI CAATTG 1 cut(s) 2132
MflI RGATCY 6 cut(s) 1222, 1264, 1911, 2107, 2161, 2704
MhlI GDGCHC 4 cut(s) 297, 1081, 2005, 2406
MluI ACGCGT 1 cut(s) 932
MlyI GAGTC 2 cut(s) 1813, 2696
MmeI TCCRAC 3 cut(s) 204, 442, 788
Mph1103I ATGCAT 2 cut(s) 2611, 2757
MslI CAYNNNNRTG 4 cut(s) 692, 1887, 1889, 2654
MspA1I CMGCKG 2 cut(s) 1580, 2293
MspCI CTTAAG 1 cut(s) 2540
MspI CCGG 1 cut(s) 613
MspR9I CCNGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
MunI CAATTG 1 cut(s) 2132
MvaI CCWGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
MvnI CGCG 2 cut(s) 934, 2293
MwoI GCNNNNNNNGC 4 cut(s) 11, 20, 1037, 2381
NdeI CATATG 1 cut(s) 2220
NlaIV GGNNCC 4 cut(s) 534, 833, 2241, 2289
NmeAIII GCCGAG 1 cut(s) 1278
NmuCI GTSAC 4 cut(s) 97, 365, 2025, 2577
NsiI ATGCAT 2 cut(s) 2611, 2757
NspI RCATGY 4 cut(s) 1111, 1309, 1676, 1775
OliI CACNNNNGTG 2 cut(s) 1887, 1889
PaeI GCATGC 1 cut(s) 1111
PciI ACATGT 1 cut(s) 1771
PfeI GAWTC 3 cut(s) 304, 791, 1368
PflMI CCANNNNNTGG 1 cut(s) 1942
PfoI TCCNGGA 1 cut(s) 777
PkrI GCNGC 3 cut(s) 340, 662, 1408
PleI GAGTC 2 cut(s) 1812, 2695
PmaCI CACGTG 1 cut(s) 506
PmlI CACGTG 1 cut(s) 506
PpsI GAGTC 2 cut(s) 1812, 2695
Ppu21I YACGTR 1 cut(s) 506
PpuMI RGGWCCY 1 cut(s) 569
PscI ACATGT 1 cut(s) 1771
PshBI ATTAAT 1 cut(s) 2477
Psp124BI GAGCTC 2 cut(s) 2005, 2406
Psp1406I AACGTT 2 cut(s) 2021, 2668
Psp5II RGGWCCY 1 cut(s) 569
Psp6I CCWGG 6 cut(s) 571, 777, 907, 1008, 1460, 1941
PspCI CACGTG 1 cut(s) 506
PspGI CCWGG 6 cut(s) 571, 777, 907, 1008, 1460, 1941
PspN4I GGNNCC 4 cut(s) 534, 833, 2241, 2289
PspPI GGNCC 5 cut(s) 569, 650, 733, 1376, 1613
PspPPI RGGWCCY 1 cut(s) 569
PstI CTGCAG 1 cut(s) 1411
PstNI CAGNNNCTG 2 cut(s) 572, 1015
PsuI RGATCY 6 cut(s) 1222, 1264, 1911, 2107, 2161, 2704
PvuII CAGCTG 1 cut(s) 1580
RsaI GTAC 6 cut(s) 600, 1298, 1654, 1776, 1799, 2289
RsaNI GTAC 6 cut(s) 599, 1297, 1653, 1775, 1798, 2288
RseI CAYNNNNRTG 4 cut(s) 692, 1887, 1889, 2654
SacI GAGCTC 2 cut(s) 2005, 2406
SacII CCGCGG 1 cut(s) 2294
SatI GCNGC 3 cut(s) 339, 661, 1407
Sau96I GGNCC 5 cut(s) 569, 650, 733, 1376, 1613
ScaI AGTACT 1 cut(s) 1799
SchI GAGTC 2 cut(s) 1813, 2696
ScrFI CCNGG 6 cut(s) 573, 779, 909, 1010, 1462, 1943
SduI GDGCHC 4 cut(s) 297, 1081, 2005, 2406
SfaNI GCATC 4 cut(s) 226, 690, 1481, 2625
SfcI CTRYAG 2 cut(s) 818, 1407
Sfr303I CCGCGG 1 cut(s) 2294
SgrBI CCGCGG 1 cut(s) 2294
SinI GGWCC 2 cut(s) 569, 1613
SmiMI CAYNNNNRTG 4 cut(s) 692, 1887, 1889, 2654
SmlI CTYRAG 3 cut(s) 1793, 1801, 2540
SmoI CTYRAG 3 cut(s) 1793, 1801, 2540
SpeI ACTAGT 3 cut(s) 1640, 1660, 2312
SphI GCATGC 1 cut(s) 1111
SsiI CCGC 3 cut(s) 2291, 2293, 2545
SspI AATATT 1 cut(s) 2723
SstI GAGCTC 2 cut(s) 2005, 2406
StyD4I CCNGG 6 cut(s) 571, 777, 907, 1008, 1460, 1941
StyI CCWWGG 1 cut(s) 1869
TaiI ACGT 7 cut(s) 264, 508, 637, 2024, 2260, 2459, 2671
TaqI TCGA 6 cut(s) 210, 1348, 1513, 1591, 1620, 2685
TatI WGTACW 3 cut(s) 1296, 1774, 1797
TfiI GAWTC 3 cut(s) 304, 791, 1368
TscAI CASTG 5 cut(s) 60, 106, 598, 1175, 1894
TseFI GTSAC 4 cut(s) 97, 365, 2025, 2577
TseI GCWGC 3 cut(s) 338, 660, 1406
Tsp45I GTSAC 4 cut(s) 97, 365, 2025, 2577
TspDTI ATGAA 8 cut(s) 240, 339, 498, 665, 1215, 1440, 2658, 2718
TspGWI ACGGA 2 cut(s) 457, 892
TspRI CASTG 5 cut(s) 60, 106, 598, 1175, 1894
Van91I CCANNNNNTGG 1 cut(s) 1942
Vha464I CTTAAG 1 cut(s) 2540
VneI GTGCAC 1 cut(s) 293
VpaK11BI GGWCC 2 cut(s) 569, 1613
VspI ATTAAT 1 cut(s) 2477
XapI RAATTY 5 cut(s) 346, 725, 1441, 2569, 2645
XbaI TCTAGA 2 cut(s) 1066, 1529
XceI RCATGY 4 cut(s) 1111, 1309, 1676, 1775
XcmI CCANNNNNNNNNTGG 1 cut(s) 1911
XmiI GTMKAC 3 cut(s) 609, 1210, 1857
ZrmI AGTACT 1 cut(s) 1799
Zsp2I ATGCAT 2 cut(s) 2611, 2757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.