Rorug05G0101900

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000865
Physical Location & Seq
Forward (+)
8971625 .. 8976647
5023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0101900.1

Sequence Viewer

Length: 2307 bp
ATGGACATCAGCGAAGAAGTCAGGGCCGCTCACCGCCGAGAGCTCACTACCTTCTTGGAAGATGGAACGTACATGGACGACATCAAGGCCGTCCTCAACCGCAAGGACCGCCGCCTCATCGTCAACATCTCCGATCTCCACTCCTACGGCGACCTCGGCAACAGGATTCTGAGAAATCCGAGTGATTATATGCAAGCGTTTAACGATGCGGCCACGGAGGTCGCCAGCAAGATCGATCCTAAGTACTTGAAGTCAGGGGATCAGCTTCTTGTGGGGTTTAATGGCCCCTTTGTGTCTCGCGGCGTCACGCCGAGAGATCTGCTCTCTGAGTACATTGGATCCATGGTTTCGGTTCGAGGCATTGTCACCAAATGTTCTCTTGTGAGGCCAAAAGTTGTTAAGAGTGTTCATTTCTGCCCTACAACTGGGAACTTTATGACTCGTGAATACCGAGACATTACATCCAACATGGGTTTGCCTACAGGAACTGTTTATCCCACCAGGGATGAAAATGGCAACTTACTGGTGACTGAGTATGGATTGTGCAAATACAAAGATCATCAGACTTTGTCAATGCAAGAAGTGCCTGAAAACTCTGCTCCTGGTCAGCTCCCAAGAACAGTGGATGTCATAGTTGAGGATGACCTTGTAGATAAGTGCAAACCAGGAGACCGTGTGGCTGTTGTAGGGATTTACAAAGCTCTTCCTGGTAAAAGTAAGGGAAGTGTGAACGGAGTATTCAGGACGGTTCTCATAGCTAACAATGTTACTCAGCTCAACAAAGAGGCACAATCGCCACAATATAGTGCTGAAGACCTGACTAATATAAAAAAGATAGCAGAGAGAGATGATGCATTTGATCTGCTTGGCAATTCACTTGCACCTTCTATTTATGGGCATTCGTGGATAAAGAAAGCAGTGATACTATTAATGCTTGGTGGAGTAGAAAAGAACCTAAAGAATGGCACCCACTTACGAGGTGACATTAACATGATGATGGTTGGTGATCCTTCTGTTGCCAAGTCTCAACTTTTAAGAGCAATTATGAATATCGCTCCATTGGCAATATCAACTACTGGTCGGGGTTCTTCTGGTGTTGGTTTGACAGCTGCTGTTACTTCAGATCAAGAGACAGGAGAGAGAAGGCTAGAAGCTGGTGCCATGGTTCTTGCTGATCGCGGTGTTGTCTGTATTGATGAATTTGACAAAATGAATGATCAAGATCGCGTTGCCATACATGAAGTTATGGAACAGCAGACTGTTACTATTGCCAAAGCTGGAATCCATGCATCTCTCAACGCGCGGTGCAGTGTGGTGGCTGCTGCAAATCCCATATATGGCTCTTATGATCGTTCATTGACACCAACAAAGAATATCGGACTTCCAGACTCTTTGCTTTCTCGTTTTGATTTGCTGTTTATTGTATTGGATCAAATGGATCCTGATATTGACCGTCAAGTCTCAGAGCACGTATTGCGTATGCATCGGTATCGTTCTGCATCTGGAGGTGAAGCAATGCTTGATGCGAACTCAGGATATGGAGGAGAAGATGAAATTGATAACGACTCCACTGTATTTGTCAAGTATAACCGGATGCTTCATGGAAAGAAAACATCTAGGGGTCAGAAGCGCGATACCCTCACAATCAAGTTTCTAAAGAAGTACATCCATTATGCAAAGCATAGGATTCAGCCTGATCTGACTGATGAGGCATCTGAACAAATTGCAACAGCATATGCAGAACTCAGAGATGCCAGTTCAAATGCAAAGACTGGAGGAACACTTCCAATTACTGCCAGAACCTTAGAAACAATCATTCGTCTCTCAACTGCTCATGCAAAATTGAAGTTGAGCAGAAAGGTTACAAAATCTGATGTTGACGCTGCTCTAAAAGTTTTAAACTTCGCAATATATCACAAGGAGCTGACTGACATGGAGGAACGGGAGCAAGAAAGAGAAATGGAGAGGAATGGCAGGGATGTTCATCGTTCAGGTGAAAATGATGGGTCTCGCAATAGAACTGCTAATAGAGATGGTGCAACAATTGATGCGATGGAAATAGATGACCCTCCTACCCAATCTGCTACTAATATTTCTTCTGATAGAAAAGAAGCATTTAATTCTTTATTTGGCGGGCATATGCGAGAAAAGCGCTTGGATAGCATATCCATTGAGGATATTGAGATGGCTGTCAATGAAAGAGCAGATTCCCGTTACTCAAGGGCAGAGATAATAGTCCTGTTAGAGAAACTTCAAGAGGATAACAGAGTGATGATAGCTGATGGAACAGTGGTTATGATCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

768

Amino Acids

85.04

Weight (kDa)

6.08

Isoelectric Point (pI)

31.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCM_N PF14551 16 - 93 2e-11 MCM N-terminal domain
MCM_OB PF17207 105 - 235 5e-31 MCM OB domain
MCM PF00493 273 - 495 2.9e-96 MCM P-loop domain
Mg_chelatase PF01078 379 - 446 3.5e-07 Magnesium chelatase, subunit ChlI
MCM_lid PF17855 551 - 634 2.2e-26 MCM AAA-lid domain
WHD_MCM3_C PF23191 697 - 767 7.2e-13 MCM3-like, winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1457
AccB1I GGYRCC 2 cut(s) 965, 1157
AccBSI CCGCTC 1 cut(s) 29
AccII CGCG 6 cut(s) 300, 1179, 1227, 1301, 1303, 1632
AclWI GGATC 8 cut(s) 230, 267, 333, 346, 1001, 1433, 1437, 1446
AcoI YGGCCR 1 cut(s) 210
AcsI RAATTY 1 cut(s) 1199
AcuI CTGAAG 2 cut(s) 831, 1104
AcyI GRCGYC 1 cut(s) 303
AfaI GTAC 4 cut(s) 71, 245, 332, 1664
AfeI AGCGCT 1 cut(s) 2153
AfiI CCNNNNNNNGG 2 cut(s) 425, 1337
AgsI TTSAA 4 cut(s) 250, 1761, 1846, 2255
AjnI CCWGG 4 cut(s) 500, 601, 664, 706
AloI GAACNNNNNNTCC 2 cut(s) 478, 510
Alw21I GWGCWC 2 cut(s) 45, 1470
Alw26I GTCTC 8 cut(s) 300, 447, 663, 1029, 1124, 1465, 1826, 2013
AlwI GGATC 8 cut(s) 230, 267, 333, 346, 1001, 1433, 1437, 1446
AlwNI CAGNNNCTG 2 cut(s) 488, 1112
Aor51HI AGCGCT 1 cut(s) 2153
AoxI GGCC 5 cut(s) 24, 87, 210, 283, 386
ApeKI GCWGC 4 cut(s) 1109, 1319, 1322, 1883
ApoI RAATTY 1 cut(s) 1199
AseI ATTAAT 1 cut(s) 929
AspLEI GCGC 3 cut(s) 1303, 1632, 2154
AspS9I GGNCC 3 cut(s) 24, 106, 284
AsuHPI GGTGA 7 cut(s) 23, 358, 538, 992, 1016, 1520, 2006
AvaII GGWCC 1 cut(s) 106
BamHI GGATCC 2 cut(s) 338, 1438
BanI GGYRCC 2 cut(s) 965, 1157
BanII GRGCYC 1 cut(s) 45
BauI CACGAG 1 cut(s) 441
BbsI GAAGAC 1 cut(s) 819
Bbv12I GWGCWC 2 cut(s) 45, 1470
BbvI GCAGC 4 cut(s) 1096, 1306, 1309, 1870
BccI CCATC 7 cut(s) 56, 991, 1997, 2027, 2047, 2179, 2276
BceAI ACGGC 2 cut(s) 74, 163
BcgI CGANNNNNNTGC 4 cut(s) 301, 335, 1472, 1506
BciT130I CCWGG 4 cut(s) 502, 603, 666, 708
BclI TGATCA 1 cut(s) 1216
BcoDI GTCTC 8 cut(s) 300, 447, 663, 1029, 1124, 1465, 1826, 2013
BfaI CTAG 2 cut(s) 1148, 1617
BfmI CTRYAG 1 cut(s) 480
BfoI RGCGCY 1 cut(s) 2155
BglII AGATCT 1 cut(s) 316
BisI GCNGC 8 cut(s) 27, 112, 210, 301, 1110, 1320, 1323, 1884
BlsI GCNGC 8 cut(s) 28, 113, 211, 302, 1111, 1321, 1324, 1885
BmcAI AGTACT 1 cut(s) 245
Bme1390I CCNGG 4 cut(s) 502, 603, 666, 708
Bme18I GGWCC 1 cut(s) 106
BmgT120I GGNCC 3 cut(s) 24, 106, 284
BmiI GGNNCC 5 cut(s) 286, 340, 967, 1159, 1440
BmrFI CCNGG 4 cut(s) 502, 603, 666, 708
BmrI ACTGGG 1 cut(s) 435
BmuI ACTGGG 1 cut(s) 435
BpiI GAAGAC 1 cut(s) 819
BplI GAGNNNNNCTC 2 cut(s) 306, 338
BpmI CTGGAG 2 cut(s) 1524, 1794
BpuEI CTTGAG 1 cut(s) 2203
Bsa29I ATCGAT 1 cut(s) 234
BsaAI YACGTR 1 cut(s) 1471
BsaBI GATNNNNATC 2 cut(s) 1221, 1983
BsaHI GRCGYC 1 cut(s) 303
BsaI GGTCTC 2 cut(s) 663, 2013
BsaJI CCNNGG 5 cut(s) 154, 213, 342, 501, 1161
BsaWI WCCGGW 1 cut(s) 1590
BsaXI ACNNNNNCTCC 2 cut(s) 660, 690
Bsc4I CCNNNNNNNGG 2 cut(s) 425, 1337
Bse1I ACTGG 5 cut(s) 430, 528, 1081, 1755, 1777
Bse3DI GCAATG 1 cut(s) 1521
Bse8I GATNNNNATC 2 cut(s) 1221, 1983
BseBI CCWGG 4 cut(s) 502, 603, 666, 708
BseCI ATCGAT 1 cut(s) 234
BseDI CCNNGG 5 cut(s) 154, 213, 342, 501, 1161
BseGI GGATG 7 cut(s) 461, 511, 631, 646, 1599, 1665, 1984
BseJI GATNNNNATC 2 cut(s) 1221, 1983
BseLI CCNNNNNNNGG 2 cut(s) 425, 1337
BseMI GCAATG 1 cut(s) 1521
BseMII CTCAG 7 cut(s) 161, 318, 522, 785, 1476, 1545, 1759
BseNI ACTGG 5 cut(s) 430, 528, 1081, 1755, 1777
BseRI GAGGAG 1 cut(s) 1557
BseXI GCAGC 4 cut(s) 1096, 1306, 1309, 1870
BsgI GTGCAG 1 cut(s) 1327
Bsh1236I CGCG 6 cut(s) 300, 1179, 1227, 1301, 1303, 1632
BshFI GGCC 5 cut(s) 26, 89, 212, 285, 388
BshNI GGYRCC 2 cut(s) 965, 1157
BshVI ATCGAT 1 cut(s) 234
BsiHKAI GWGCWC 2 cut(s) 45, 1470
BsiSI CCGG 1 cut(s) 1591
BslI CCNNNNNNNGG 2 cut(s) 425, 1337
BsmAI GTCTC 8 cut(s) 300, 447, 663, 1029, 1124, 1465, 1826, 2013
BsmBI CGTCTC 1 cut(s) 1826
BsmI GAATGC 1 cut(s) 898
BsnI GGCC 5 cut(s) 26, 89, 212, 285, 388
Bso31I GGTCTC 2 cut(s) 663, 2013
Bsp1286I GDGCHC 2 cut(s) 45, 1470
Bsp19I CCATGG 2 cut(s) 342, 1161
BspANI GGCC 5 cut(s) 26, 89, 212, 285, 388
BspCNI CTCAG 7 cut(s) 162, 319, 523, 784, 1475, 1544, 1758
BspDI ATCGAT 1 cut(s) 234
BspFNI CGCG 6 cut(s) 300, 1179, 1227, 1301, 1303, 1632
BspLI GGNNCC 5 cut(s) 286, 340, 967, 1159, 1440
BspPI GGATC 8 cut(s) 230, 267, 333, 346, 1001, 1433, 1437, 1446
BspQI GCTCTTC 1 cut(s) 708
BspT107I GGYRCC 2 cut(s) 965, 1157
BspTNI GGTCTC 2 cut(s) 663, 2013
BsrBI CCGCTC 1 cut(s) 29
BsrDI GCAATG 1 cut(s) 1521
BsrI ACTGG 5 cut(s) 430, 528, 1081, 1755, 1777
BssECI CCNNGG 5 cut(s) 154, 213, 342, 501, 1161
BssNI GRCGYC 1 cut(s) 303
BssSI CACGAG 1 cut(s) 441
BssT1I CCWWGG 2 cut(s) 342, 1161
Bst2BI CACGAG 1 cut(s) 441
Bst2UI CCWGG 4 cut(s) 502, 603, 666, 708
Bst4CI ACNGT 8 cut(s) 490, 622, 674, 748, 1261, 1454, 1573, 2290
Bst6I CTCTTC 1 cut(s) 708
BstACI GRCGYC 1 cut(s) 303
BstAPI GCANNNNNTGC 2 cut(s) 583, 1474
BstBAI YACGTR 1 cut(s) 1471
BstC8I GCNNGC 3 cut(s) 195, 226, 2135
BstDEI CTNAG 9 cut(s) 170, 240, 327, 531, 771, 1462, 1531, 1745, 1804
BstDSI CCRYGG 3 cut(s) 213, 342, 1161
BstF5I GGATG 7 cut(s) 461, 511, 631, 646, 1599, 1665, 1984
BstFNI CGCG 6 cut(s) 300, 1179, 1227, 1301, 1303, 1632
BstH2I RGCGCY 1 cut(s) 2155
BstHHI GCGC 3 cut(s) 1303, 1632, 2154
BstMAI GTCTC 8 cut(s) 300, 447, 663, 1029, 1124, 1465, 1826, 2013
BstMWI GCNNNNNNNGC 7 cut(s) 108, 156, 583, 1061, 1474, 2149, 2160
BstNI CCWGG 4 cut(s) 502, 603, 666, 708
BstSCI CCNGG 4 cut(s) 500, 601, 664, 706
BstSFI CTRYAG 1 cut(s) 480
BstUI CGCG 6 cut(s) 300, 1179, 1227, 1301, 1303, 1632
BstV1I GCAGC 4 cut(s) 1096, 1306, 1309, 1870
BstV2I GAAGAC 1 cut(s) 819
BstX2I RGATCY 3 cut(s) 316, 338, 1438
BstYI RGATCY 3 cut(s) 316, 338, 1438
Bsu15I ATCGAT 1 cut(s) 234
BsuRI GGCC 5 cut(s) 26, 89, 212, 285, 388
BsuTUI ATCGAT 1 cut(s) 234
BtgI CCRYGG 3 cut(s) 213, 342, 1161
BtgZI GCGATG 1 cut(s) 2066
BtsCI GGATG 7 cut(s) 461, 511, 631, 646, 1599, 1665, 1984
BtsI GCAGTG 2 cut(s) 924, 1315
BtsIMutI CAGTG 5 cut(s) 627, 924, 1315, 1569, 2295
Cac8I GCNNGC 3 cut(s) 195, 226, 2135
CaiI CAGNNNCTG 2 cut(s) 488, 1112
CfoI GCGC 3 cut(s) 1303, 1632, 2154
Cfr13I GGNCC 3 cut(s) 24, 106, 284
ClaI ATCGAT 1 cut(s) 234
CseI GACGC 2 cut(s) 292, 1889
Csp6I GTAC 4 cut(s) 70, 244, 331, 1663
CspCI CAANNNNNGTGG 4 cut(s) 603, 638, 1558, 1593
CviQI GTAC 4 cut(s) 70, 244, 331, 1663
DdeI CTNAG 9 cut(s) 170, 240, 327, 531, 771, 1462, 1531, 1745, 1804
DraI TTTAAA 1 cut(s) 1899
DrdI GACNNNNNNGTC 1 cut(s) 1457
DseDI GACNNNNNNGTC 1 cut(s) 1457
EaeI YGGCCR 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 708
EarI CTCTTC 1 cut(s) 708
Ecl136II GAGCTC 1 cut(s) 43
Eco130I CCWWGG 2 cut(s) 342, 1161
Eco24I GRGCYC 1 cut(s) 45
Eco31I GGTCTC 2 cut(s) 663, 2013
Eco47I GGWCC 1 cut(s) 106
Eco47III AGCGCT 1 cut(s) 2153
Eco53kI GAGCTC 1 cut(s) 43
Eco57I CTGAAG 2 cut(s) 831, 1104
EcoICRI GAGCTC 1 cut(s) 43
EcoRII CCWGG 4 cut(s) 500, 601, 664, 706
EcoT14I CCWWGG 2 cut(s) 342, 1161
EcoT22I ATGCAT 3 cut(s) 856, 1291, 1485
EcoT38I GRGCYC 1 cut(s) 45
ErhI CCWWGG 2 cut(s) 342, 1161
Esp3I CGTCTC 1 cut(s) 1826
FalI AAGNNNNNCTT 2 cut(s) 1503, 1535
FauI CCCGC 1 cut(s) 2126
FauNDI CATATG 2 cut(s) 1735, 2139
FbaI TGATCA 1 cut(s) 1216
Fnu4HI GCNGC 8 cut(s) 27, 112, 210, 301, 1110, 1320, 1323, 1884
FokI GGATG 7 cut(s) 448, 518, 638, 653, 1606, 1652, 1991
FriOI GRGCYC 1 cut(s) 45
Fsp4HI GCNGC 8 cut(s) 27, 112, 210, 301, 1110, 1320, 1323, 1884
FspBI CTAG 2 cut(s) 1148, 1617
GlaI GCGC 3 cut(s) 1302, 1631, 2153
GluI GCNGC 8 cut(s) 27, 112, 210, 301, 1110, 1320, 1323, 1884
GsuI CTGGAG 2 cut(s) 1524, 1794
HaeII RGCGCY 1 cut(s) 2155
HaeIII GGCC 5 cut(s) 26, 89, 212, 285, 388
HapII CCGG 1 cut(s) 1591
HgaI GACGC 2 cut(s) 292, 1889
HhaI GCGC 3 cut(s) 1303, 1632, 2154
Hin1I GRCGYC 1 cut(s) 303
Hin6I GCGC 3 cut(s) 1301, 1630, 2152
HinP1I GCGC 3 cut(s) 1301, 1630, 2152
HincII GTYRAC 2 cut(s) 124, 1879
HindII GTYRAC 2 cut(s) 124, 1879
HinfI GANTC 7 cut(s) 166, 439, 1281, 1388, 1565, 1687, 2207
HpaII CCGG 1 cut(s) 1591
HphI GGTGA 7 cut(s) 23, 358, 538, 992, 1016, 1520, 2006
Hpy166II GTNNAC 3 cut(s) 124, 730, 1879
Hpy188III TCNNGA 9 cut(s) 443, 742, 1127, 1220, 1385, 1442, 1503, 1533, 2255
Hpy8I GTNNAC 3 cut(s) 124, 730, 1879
HpyAV CCTTC 4 cut(s) 61, 894, 1020, 1137
HpyCH4III ACNGT 8 cut(s) 490, 622, 674, 748, 1261, 1454, 1573, 2290
HpyCH4IV ACGT 2 cut(s) 68, 1470
HpyF10VI GCNNNNNNNGC 7 cut(s) 108, 156, 583, 1061, 1474, 2149, 2160
HpyF3I CTNAG 9 cut(s) 170, 240, 327, 531, 771, 1462, 1531, 1745, 1804
HpySE526I ACGT 2 cut(s) 68, 1470
Hsp92I GRCGYC 1 cut(s) 303
HspAI GCGC 3 cut(s) 1301, 1630, 2152
Ksp22I TGATCA 1 cut(s) 1216
LguI GCTCTTC 1 cut(s) 708
LmnI GCTCC 5 cut(s) 604, 615, 1060, 1921, 1945
Lsp1109I GCAGC 4 cut(s) 1096, 1306, 1309, 1870
MaeI CTAG 2 cut(s) 1148, 1617
MaeII ACGT 2 cut(s) 68, 1470
MaeIII GTNAC 9 cut(s) 304, 364, 526, 766, 980, 1114, 1261, 1861, 2213
MbiI CCGCTC 1 cut(s) 29
MboII GAAGA 7 cut(s) 26, 71, 695, 824, 1080, 1559, 2088
MfeI CAATTG 1 cut(s) 2043
MflI RGATCY 3 cut(s) 316, 338, 1438
MhlI GDGCHC 2 cut(s) 45, 1470
MluCI AATT 9 cut(s) 871, 1041, 1199, 1554, 1722, 1788, 1841, 2043, 2119
MlyI GAGTC 3 cut(s) 433, 1382, 1559
MmeI TCCRAC 1 cut(s) 489
Mph1103I ATGCAT 3 cut(s) 856, 1291, 1485
MseI TTAA 8 cut(s) 201, 279, 399, 929, 987, 1034, 1898, 2118
MslI CAYNNNNRTG 2 cut(s) 989, 995
MspA1I CMGCKG 1 cut(s) 1109
MspI CCGG 1 cut(s) 1591
MspR9I CCNGG 4 cut(s) 502, 603, 666, 708
MunI CAATTG 1 cut(s) 2043
Mva1269I GAATGC 1 cut(s) 898
MvaI CCWGG 4 cut(s) 502, 603, 666, 708
MvnI CGCG 6 cut(s) 300, 1179, 1227, 1301, 1303, 1632
MwoI GCNNNNNNNGC 7 cut(s) 108, 156, 583, 1061, 1474, 2149, 2160
NcoI CCATGG 2 cut(s) 342, 1161
NdeI CATATG 2 cut(s) 1735, 2139
NlaIV GGNNCC 5 cut(s) 286, 340, 967, 1159, 1440
NmeAIII GCCGAG 3 cut(s) 62, 135, 336
NmuCI GTSAC 4 cut(s) 304, 364, 526, 980
NsiI ATGCAT 3 cut(s) 856, 1291, 1485
PciSI GCTCTTC 1 cut(s) 708
PcsI WCGNNNNNNNCGW 1 cut(s) 448
PctI GAATGC 1 cut(s) 898
PfeI GAWTC 4 cut(s) 166, 1281, 1687, 2207
PflFI GACNNNGTC 1 cut(s) 568
PkrI GCNGC 8 cut(s) 28, 113, 211, 302, 1111, 1321, 1324, 1885
PleI GAGTC 3 cut(s) 433, 1382, 1559
PpsI GAGTC 3 cut(s) 433, 1382, 1559
Ppu21I YACGTR 1 cut(s) 1471
PshBI ATTAAT 1 cut(s) 929
Psp124BI GAGCTC 1 cut(s) 45
Psp6I CCWGG 4 cut(s) 500, 601, 664, 706
PspGI CCWGG 4 cut(s) 500, 601, 664, 706
PspN4I GGNNCC 5 cut(s) 286, 340, 967, 1159, 1440
PspPI GGNCC 3 cut(s) 24, 106, 284
PstNI CAGNNNCTG 2 cut(s) 488, 1112
PsuI RGATCY 3 cut(s) 316, 338, 1438
PsyI GACNNNGTC 1 cut(s) 568
PvuII CAGCTG 1 cut(s) 1109
RsaI GTAC 4 cut(s) 71, 245, 332, 1664
RsaNI GTAC 4 cut(s) 70, 244, 331, 1663
RseI CAYNNNNRTG 2 cut(s) 989, 995
SacI GAGCTC 1 cut(s) 45
SapI GCTCTTC 1 cut(s) 708
SaqAI TTAA 8 cut(s) 201, 279, 399, 929, 987, 1034, 1898, 2118
SatI GCNGC 8 cut(s) 27, 112, 210, 301, 1110, 1320, 1323, 1884
Sau96I GGNCC 3 cut(s) 24, 106, 284
ScaI AGTACT 1 cut(s) 245
SchI GAGTC 3 cut(s) 433, 1382, 1559
ScrFI CCNGG 4 cut(s) 502, 603, 666, 708
SduI GDGCHC 2 cut(s) 45, 1470
SfcI CTRYAG 1 cut(s) 480
SinI GGWCC 1 cut(s) 106
SmiMI CAYNNNNRTG 2 cut(s) 989, 995
SmlI CTYRAG 1 cut(s) 2218
SmoI CTYRAG 1 cut(s) 2218
Sse9I AATT 9 cut(s) 871, 1041, 1199, 1554, 1722, 1788, 1841, 2043, 2119
SspI AATATT 1 cut(s) 2092
SspMI CTAG 2 cut(s) 1148, 1617
SstI GAGCTC 1 cut(s) 45
StyD4I CCNGG 4 cut(s) 500, 601, 664, 706
StyI CCWWGG 2 cut(s) 342, 1161
TaaI ACNGT 8 cut(s) 490, 622, 674, 748, 1261, 1454, 1573, 2290
TaiI ACGT 2 cut(s) 71, 1473
TaqI TCGA 2 cut(s) 234, 355
TasI AATT 9 cut(s) 871, 1041, 1199, 1554, 1722, 1788, 1841, 2043, 2119
TatI WGTACW 3 cut(s) 243, 330, 1662
TauI GCSGC 4 cut(s) 29, 114, 212, 303
TfiI GAWTC 4 cut(s) 166, 1281, 1687, 2207
Tru1I TTAA 8 cut(s) 201, 279, 399, 929, 987, 1034, 1898, 2118
Tru9I TTAA 8 cut(s) 201, 279, 399, 929, 987, 1034, 1898, 2118
TscAI CASTG 5 cut(s) 627, 924, 1315, 1576, 2295
TseFI GTSAC 4 cut(s) 304, 364, 526, 980
TseI GCWGC 4 cut(s) 1109, 1319, 1322, 1883
Tsp45I GTSAC 4 cut(s) 304, 364, 526, 980
TspGWI ACGGA 2 cut(s) 230, 747
TspRI CASTG 5 cut(s) 627, 924, 1315, 1576, 2295
Tth111I GACNNNGTC 1 cut(s) 568
VpaK11BI GGWCC 1 cut(s) 106
VspI ATTAAT 1 cut(s) 929
XapI RAATTY 1 cut(s) 1199
XspI CTAG 2 cut(s) 1148, 1617
ZrmI AGTACT 1 cut(s) 245
Zsp2I ATGCAT 3 cut(s) 856, 1291, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.