Rroxscaffold_1G00051770

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
72490574 .. 72493392
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00051770.1

Sequence Viewer

Length: 2229 bp
ATGGCTGAACTTGCCATTCATGTAGCTCTGGCCTTAATTGACAAGGTGATAATCATCCTACAGCAAAACTTTCACCTTCAAACTAGAGTCAGGGATGATGTTGTAAAAGCCCAGAAGTATTTGTGGTGGATGGAAGCGTATCTAGCCGACACATCAGAACATATCGATGAGGGTACTCGAGTGTTTCAGACTCGAGTAAGAGATATCCAAGATTTGGCTTATGAAATTGAGGATGCTCTTGACAAGTTCATGCTTCAGGTTCCTCATCACATCCATAGCAATATAGCCTCTCAGACGATACACAAAGCTGTTCATTATTTCCCAACCAGGACTGCAGGCAAGGAGTTGTCGACTGAGATTAATGGTTTGACCCACTACGACCATGTTCTTGAAGAAGAAGAAATAGTGGGCTTTGAGGAGCATGAAGAAAAACTCTTGTCACAGTTGATGGAAGAAAATTCAAGGCTTTTGACGATTTCGATTGTAGGCCCGGGCGGTTCGGGCAAAACCACTCTGGCAAAGAAGGTTTTCGACAACAAGCGGGTCCAAGGGTTTTTTGACTGCCAAGCTTGGGTTGATGTGCCACGCGCATTTGTACTCCATGAGGTTGTGCTAAACCTTCTAAGCAAAATTGAGGCAAAAGGGCAGAAGGAACCAGTATTTCATGGAGAAAATGATCCAAAGGATAAATTGAGACTACTTCTCAAGGACAAGCGGTTTTTGGTCGTTTTGGATAATGTTCGGAACAGACCAGATTTAGAATACGTCGTAAAGGCATTACAACATGGTTCGAATGGCAGTAGAATCATCATCACTACTCCTAATGTAGCTTCTATTTCCTCTAAGGAAATCGATGTACGAGTAAGGAGTTGTCGTGTTTTGAACCTTGTTCGTGACCTCATCATTTCAAAAGCCGAGAATTTCATTAGTGTTTTGGATCAAAGTTATCAAACAGACTATGGTACTAGTGGTATTTCAGGTGAGAAAATACGCCGCCTTTCTATTCATAATGCCGATATCAAATTGCTAGAGTCTAGATATGACTTGAGTCATATTCGTACCCTATTACTATTCCAGCAGCAAAGTTCTCATTCTGTGCTTGAAAAGGTAGTTGAAAGATCTCGATGTTTAAGGGTTTTAGATTTGCAAGGTGTGCCCTTAGAGGACTTTCCCAACAGTGTTCTTGCTCTCACTCTCTTAAAATACTTGAGTCTCAGAGAAACCAACATTAAAACAGTTCCAAAGTCCATAAAGAATCTAGAACGCTTGGAAACCTTGGATCTTAAGCACACTCAAGTCACCACTTTACCAAAAGAGATTTATGAGCTCCACAGTATGCGCCACCTTTTAGTGTATCGCTATGATGTCAAGAATTATGTGATGTTTGGAGATGCCCAAGGAGTGGAGGTTTCTGAAAGCATGCTTTCTGCAGTGAATATTGGAGCCTTATCATCTATACAAAAGTTGTCACTAATGAAGGTGAAAAACAACAAAAAACTCATTAAAGCCTTGGGAAGGCTAACTGATCTTAGAAAGCTAGGGCTGACAGATCTAGAAAGACAAGACGGAAGAGATCTGTGTTTAGCCATTCAAAAGATGGAGCATCTTTCAACACTTGATGTAAGATCAACAAGTGTGGACGAGTATCTTGAGTTGGATCATATGCAATCTGGATCCCCTTCACCACTCTATCTAGAGAGATTATATTTGAAAGGGAGTCTGGAAAGGTTACCACGGTGGATTCCTAAGCTTAATAGTCTAGCAAAGATTGGTTTGAAGTGGTCAAAGCTGAATGCTAACCCACTTGACGCCCTTCAAGGTTTGCCTAATCTAATGCAGCTCGAGTTGGTTGACTATTACCGAGGGAAAGTGCTAGAATTCAGTACCAATACGTTCAAGAAACTAAAGATATTACATATTGAACAATTTGAAGGGCTAAATATGATGGTAGTCGAGAGTGGAGCAATGCCCATGCTTGAGAAGCTAACCATGTGTAAATGTCGGAATTTGAAGTTACTTCCAGCATTTGGCCCTGATGATCTGAAATCACTGGAGGAACTGCTTCTGTATGACATGCACAAGGAATTCATTGCTAAGCTTCAGAATGATTCCGAAGACCGTCTGGGGTATAAGCATGTTAGAGTCATACATTCTTTCAGTCTCGGCAGCAACCATTCTTTCACTGATTTCAAAAATCTTTCTCCATCACAGTGGCTTGTGGAACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

742

Amino Acids

85.03

Weight (kDa)

7.18

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 92 4e-12 Rx N-terminal domain
NB-ARC PF00931 139 - 276 2.9e-26 NB-ARC domain
LRR_14 PF23598 351 - 687 4.2e-41 Leucine-rich repeat region
LRR_8 PF13855 377 - 432 3.1e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 214, 1402, 2027
AccI GTMKAC 1 cut(s) 350
AccII CGCG 1 cut(s) 588
AciI CCGC 4 cut(s) 495, 541, 715, 994
AclWI GGATC 6 cut(s) 671, 945, 1287, 1665, 1668, 1681
AcsI RAATTY 5 cut(s) 457, 919, 1877, 2005, 2084
AcuI CTGAAG 2 cut(s) 239, 2084
AcyI GRCGYC 1 cut(s) 1809
AfaI GTAC 6 cut(s) 175, 597, 858, 964, 1060, 1885
AfiI CCNNNNNNNGG 5 cut(s) 214, 571, 1402, 1515, 2027
AflII CTTAAG 1 cut(s) 1283
AhlI ACTAGT 1 cut(s) 965
AjnI CCWGG 1 cut(s) 326
Alw21I GWGCWC 1 cut(s) 1329
Alw26I GTCTC 3 cut(s) 688, 1217, 2165
AlwI GGATC 6 cut(s) 671, 945, 1287, 1665, 1668, 1681
Ama87I CYCGRG 4 cut(s) 177, 192, 490, 1841
AoxI GGCC 3 cut(s) 30, 487, 2029
ApeKI GCWGC 3 cut(s) 1078, 1837, 2166
ApoI RAATTY 5 cut(s) 457, 919, 1877, 2005, 2084
AseI ATTAAT 1 cut(s) 360
Asp700I GAANNNNTTC 2 cut(s) 527, 2061
AspLEI GCGC 2 cut(s) 590, 1341
AspS9I GGNCC 3 cut(s) 488, 544, 2030
AsuC2I CCSGG 2 cut(s) 491, 492
AsuHPI GGTGA 6 cut(s) 58, 65, 992, 1291, 1492, 1674
AsuII TTCGAA 1 cut(s) 791
AvaI CYCGRG 4 cut(s) 177, 192, 490, 1841
AvaII GGWCC 1 cut(s) 544
BaeGI GKGCMC 1 cut(s) 1158
BaeI ACNNNNGTAYC 2 cut(s) 165, 198
BamHI GGATCC 1 cut(s) 1673
BanII GRGCYC 1 cut(s) 1329
BbsI GAAGAC 1 cut(s) 2121
Bbv12I GWGCWC 1 cut(s) 1329
BbvI GCAGC 3 cut(s) 1090, 1849, 2178
BccI CCATC 5 cut(s) 124, 442, 1591, 1939, 2212
BciT130I CCWGG 1 cut(s) 328
BcnI CCSGG 2 cut(s) 491, 492
BcoDI GTCTC 3 cut(s) 688, 1217, 2165
BcuI ACTAGT 1 cut(s) 965
BfmI CTRYAG 3 cut(s) 59, 333, 1428
BfrI CTTAAG 1 cut(s) 1283
BglII AGATCT 3 cut(s) 1118, 1549, 1573
BisI GCNGC 4 cut(s) 994, 1079, 1838, 2167
BlpI GCTNAGC 1 cut(s) 2094
BlsI GCNGC 4 cut(s) 995, 1080, 1839, 2168
Bme1390I CCNGG 3 cut(s) 328, 491, 492
Bme18I GGWCC 1 cut(s) 544
BmeT110I CYCGRG 4 cut(s) 177, 192, 490, 1841
BmgT120I GGNCC 3 cut(s) 488, 544, 2030
BmiI GGNNCC 5 cut(s) 261, 545, 654, 1444, 1675
BmrFI CCNGG 3 cut(s) 328, 491, 492
BmsI GCATC 3 cut(s) 223, 1381, 1612
BoxI GACNNNNGTC 1 cut(s) 1047
BpiI GAAGAC 1 cut(s) 2121
BpmI CTGGAG 1 cut(s) 2072
Bpu10I CCTNAGC 1 cut(s) 1746
Bpu1102I GCTNAGC 1 cut(s) 2094
Bpu14I TTCGAA 1 cut(s) 791
BpuEI CTTGAG 6 cut(s) 689, 1066, 1228, 1278, 1670, 1997
BpuMI CCSGG 2 cut(s) 491, 492
Bsa29I ATCGAT 2 cut(s) 165, 852
BsaBI GATNNNNATC 1 cut(s) 53
BsaHI GRCGYC 1 cut(s) 1809
BsaJI CCNNGG 7 cut(s) 490, 547, 1275, 1396, 1509, 1733, 1861
BsaXI ACNNNNNCTCC 4 cut(s) 859, 889, 1392, 1422
Bsc4I CCNNNNNNNGG 5 cut(s) 214, 571, 1402, 1515, 2027
Bse1I ACTGG 2 cut(s) 656, 2055
Bse3DI GCAATG 2 cut(s) 1971, 2088
Bse8I GATNNNNATC 1 cut(s) 53
BseBI CCWGG 1 cut(s) 328
BseCI ATCGAT 2 cut(s) 165, 852
BseDI CCNNGG 7 cut(s) 490, 547, 1275, 1396, 1509, 1733, 1861
BseGI GGATG 5 cut(s) 54, 100, 135, 238, 270
BseJI GATNNNNATC 1 cut(s) 53
BseLI CCNNNNNNNGG 5 cut(s) 214, 571, 1402, 1515, 2027
BseMI GCAATG 2 cut(s) 1971, 2088
BseMII CTCAG 3 cut(s) 305, 345, 1228
BseNI ACTGG 2 cut(s) 656, 2055
BseRI GAGGAG 1 cut(s) 431
BseSI GKGCMC 1 cut(s) 1158
BseXI GCAGC 3 cut(s) 1090, 1849, 2178
Bsh1236I CGCG 1 cut(s) 588
BshFI GGCC 3 cut(s) 32, 489, 2031
BshVI ATCGAT 2 cut(s) 165, 852
BsiHKAI GWGCWC 1 cut(s) 1329
BsiHKCI CYCGRG 4 cut(s) 177, 192, 490, 1841
BsiSI CCGG 1 cut(s) 491
BslI CCNNNNNNNGG 5 cut(s) 214, 571, 1402, 1515, 2027
BsmAI GTCTC 3 cut(s) 688, 1217, 2165
BsmI GAATGC 1 cut(s) 1798
BsnI GGCC 3 cut(s) 32, 489, 2031
BsoBI CYCGRG 4 cut(s) 177, 192, 490, 1841
Bsp119I TTCGAA 1 cut(s) 791
Bsp1286I GDGCHC 2 cut(s) 1158, 1329
Bsp1720I GCTNAGC 1 cut(s) 2094
BspACI CCGC 4 cut(s) 495, 541, 715, 994
BspANI GGCC 3 cut(s) 32, 489, 2031
BspCNI CTCAG 3 cut(s) 304, 346, 1227
BspDI ATCGAT 2 cut(s) 165, 852
BspFNI CGCG 1 cut(s) 588
BspLI GGNNCC 5 cut(s) 261, 545, 654, 1444, 1675
BspMAI CTGCAG 2 cut(s) 337, 1432
BspPI GGATC 6 cut(s) 671, 945, 1287, 1665, 1668, 1681
BspT104I TTCGAA 1 cut(s) 791
BspTI CTTAAG 1 cut(s) 1283
BsrDI GCAATG 2 cut(s) 1971, 2088
BsrI ACTGG 2 cut(s) 656, 2055
BssECI CCNNGG 7 cut(s) 490, 547, 1275, 1396, 1509, 1733, 1861
BssNI GRCGYC 1 cut(s) 1809
BssT1I CCWWGG 4 cut(s) 547, 1275, 1396, 1509
Bst2UI CCWGG 1 cut(s) 328
Bst4CI ACNGT 7 cut(s) 444, 1178, 1237, 1334, 1737, 2120, 2211
Bst6I CTCTTC 1 cut(s) 1564
BstACI GRCGYC 1 cut(s) 1809
BstAFI CTTAAG 1 cut(s) 1283
BstAPI GCANNNNNTGC 1 cut(s) 1153
BstBI TTCGAA 1 cut(s) 791
BstC8I GCNNGC 2 cut(s) 337, 1421
BstDEI CTNAG 9 cut(s) 291, 354, 623, 843, 1159, 1214, 1529, 1746, 2094
BstDSI CCRYGG 1 cut(s) 1733
BstEII GGTNACC 1 cut(s) 1728
BstENI CCTNNNNNAGG 1 cut(s) 1513
BstF5I GGATG 5 cut(s) 54, 100, 135, 238, 270
BstFNI CGCG 1 cut(s) 588
BstHHI GCGC 2 cut(s) 590, 1341
BstMAI GTCTC 3 cut(s) 688, 1217, 2165
BstMWI GCNNNNNNNGC 5 cut(s) 11, 143, 501, 1153, 1981
BstNI CCWGG 1 cut(s) 328
BstNSI RCATGY 3 cut(s) 1423, 2077, 2138
BstPAI GACNNNNGTC 1 cut(s) 1047
BstPI GGTNACC 1 cut(s) 1728
BstSCI CCNGG 3 cut(s) 326, 489, 490
BstSFI CTRYAG 3 cut(s) 59, 333, 1428
BstSLI GKGCMC 1 cut(s) 1158
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 3 cut(s) 1090, 1849, 2178
BstV2I GAAGAC 1 cut(s) 2121
BstX2I RGATCY 5 cut(s) 1118, 1279, 1549, 1573, 1673
BstXI CCANNNNNNTGG 1 cut(s) 2211
BstYI RGATCY 5 cut(s) 1118, 1279, 1549, 1573, 1673
Bsu15I ATCGAT 2 cut(s) 165, 852
BsuRI GGCC 3 cut(s) 32, 489, 2031
BsuTUI ATCGAT 2 cut(s) 165, 852
BtgI CCRYGG 1 cut(s) 1733
BtsCI GGATG 5 cut(s) 54, 100, 135, 238, 270
BtsI GCAGTG 1 cut(s) 1437
BtsIMutI CAGTG 5 cut(s) 1183, 1437, 2048, 2181, 2216
Cac8I GCNNGC 2 cut(s) 337, 1421
CfoI GCGC 2 cut(s) 590, 1341
Cfr13I GGNCC 3 cut(s) 488, 544, 2030
Cfr9I CCCGGG 1 cut(s) 490
ClaI ATCGAT 2 cut(s) 165, 852
CseI GACGC 1 cut(s) 1817
Csp6I GTAC 6 cut(s) 174, 596, 857, 963, 1059, 1884
CspCI CAANNNNNGTGG 2 cut(s) 1617, 1652
CviQI GTAC 6 cut(s) 174, 596, 857, 963, 1059, 1884
DdeI CTNAG 9 cut(s) 291, 354, 623, 843, 1159, 1214, 1529, 1746, 2094
Eam1104I CTCTTC 1 cut(s) 1564
EarI CTCTTC 1 cut(s) 1564
Ecl136II GAGCTC 1 cut(s) 1327
Eco130I CCWWGG 4 cut(s) 547, 1275, 1396, 1509
Eco24I GRGCYC 1 cut(s) 1329
Eco32I GATATC 2 cut(s) 205, 1018
Eco47I GGWCC 1 cut(s) 544
Eco53kI GAGCTC 1 cut(s) 1327
Eco57I CTGAAG 2 cut(s) 239, 2084
Eco88I CYCGRG 4 cut(s) 177, 192, 490, 1841
Eco91I GGTNACC 1 cut(s) 1728
EcoICRI GAGCTC 1 cut(s) 1327
EcoNI CCTNNNNNAGG 1 cut(s) 1513
EcoO65I GGTNACC 1 cut(s) 1728
EcoRI GAATTC 2 cut(s) 1877, 2084
EcoRII CCWGG 1 cut(s) 326
EcoRV GATATC 2 cut(s) 205, 1018
EcoT14I CCWWGG 4 cut(s) 547, 1275, 1396, 1509
EcoT38I GRGCYC 1 cut(s) 1329
ErhI CCWWGG 4 cut(s) 547, 1275, 1396, 1509
FauI CCCGC 1 cut(s) 534
FauNDI CATATG 1 cut(s) 1662
FblI GTMKAC 1 cut(s) 350
Fnu4HI GCNGC 4 cut(s) 994, 1079, 1838, 2167
FokI GGATG 5 cut(s) 41, 107, 142, 245, 257
FriOI GRGCYC 1 cut(s) 1329
Fsp4HI GCNGC 4 cut(s) 994, 1079, 1838, 2167
GlaI GCGC 2 cut(s) 589, 1340
GluI GCNGC 4 cut(s) 994, 1079, 1838, 2167
GsuI CTGGAG 1 cut(s) 2072
HaeIII GGCC 3 cut(s) 32, 489, 2031
HapII CCGG 1 cut(s) 491
HgaI GACGC 1 cut(s) 1817
HhaI GCGC 2 cut(s) 590, 1341
Hin1I GRCGYC 1 cut(s) 1809
Hin6I GCGC 2 cut(s) 588, 1339
HinP1I GCGC 2 cut(s) 588, 1339
HincII GTYRAC 2 cut(s) 351, 1852
HindII GTYRAC 2 cut(s) 351, 1852
HindIII AAGCTT 3 cut(s) 567, 1748, 2096
HpaII CCGG 1 cut(s) 491
HphI GGTGA 6 cut(s) 58, 65, 992, 1291, 1492, 1674
Hpy166II GTNNAC 3 cut(s) 351, 1639, 1852
Hpy8I GTNNAC 3 cut(s) 351, 1639, 1852
Hpy99I CGWCG 1 cut(s) 770
HpyAV CCTTC 9 cut(s) 86, 517, 629, 643, 1471, 1509, 1689, 1823, 1925
HpyCH4III ACNGT 7 cut(s) 444, 1178, 1237, 1334, 1737, 2120, 2211
HpyCH4IV ACGT 2 cut(s) 765, 1892
HpyCH4V TGCA 6 cut(s) 335, 1147, 1430, 1666, 1837, 2077
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 143, 501, 1153, 1981
HpyF3I CTNAG 9 cut(s) 291, 354, 623, 843, 1159, 1214, 1529, 1746, 2094
HpySE526I ACGT 2 cut(s) 765, 1892
Hsp92I GRCGYC 1 cut(s) 1809
HspAI GCGC 2 cut(s) 588, 1339
LmnI GCTCC 5 cut(s) 418, 1332, 1442, 1600, 1961
Lsp1109I GCAGC 3 cut(s) 1090, 1849, 2178
LweI GCATC 3 cut(s) 223, 1381, 1612
MaeII ACGT 2 cut(s) 765, 1892
MaeIII GTNAC 6 cut(s) 438, 893, 1297, 1467, 1728, 2013
MboII GAAGA 7 cut(s) 404, 407, 410, 437, 464, 1581, 2126
MflI RGATCY 5 cut(s) 1118, 1279, 1549, 1573, 1673
MhlI GDGCHC 2 cut(s) 1158, 1329
MlyI GAGTC 7 cut(s) 96, 184, 1040, 1057, 1219, 1726, 2151
MmeI TCCRAC 2 cut(s) 1635, 1982
MroXI GAANNNNTTC 2 cut(s) 527, 2061
MseI TTAA 8 cut(s) 35, 360, 1130, 1199, 1230, 1284, 1503, 1752
MslI CAYNNNNRTG 2 cut(s) 165, 2209
MspCI CTTAAG 1 cut(s) 1283
MspI CCGG 1 cut(s) 491
MspR9I CCNGG 3 cut(s) 328, 491, 492
Mva1269I GAATGC 1 cut(s) 1798
MvaI CCWGG 1 cut(s) 328
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 5 cut(s) 11, 143, 501, 1153, 1981
NciI CCSGG 2 cut(s) 491, 492
NdeI CATATG 1 cut(s) 1662
NlaIV GGNNCC 5 cut(s) 261, 545, 654, 1444, 1675
NmeAIII GCCGAG 2 cut(s) 940, 2142
NmuCI GTSAC 4 cut(s) 438, 893, 1297, 1467
NspI RCATGY 3 cut(s) 1423, 2077, 2138
NspV TTCGAA 1 cut(s) 791
PaeI GCATGC 1 cut(s) 1423
PaeR7I CTCGAG 3 cut(s) 177, 192, 1841
PctI GAATGC 1 cut(s) 1798
PdmI GAANNNNTTC 2 cut(s) 527, 2061
PfeI GAWTC 4 cut(s) 804, 1255, 1741, 2108
PflMI CCANNNNNTGG 3 cut(s) 214, 1402, 2027
PkrI GCNGC 4 cut(s) 995, 1080, 1839, 2168
PleI GAGTC 7 cut(s) 95, 184, 1039, 1056, 1218, 1725, 2150
PpsI GAGTC 7 cut(s) 95, 184, 1039, 1056, 1218, 1725, 2150
PshAI GACNNNNGTC 1 cut(s) 1047
PshBI ATTAAT 1 cut(s) 360
Psp124BI GAGCTC 1 cut(s) 1329
Psp6I CCWGG 1 cut(s) 326
PspEI GGTNACC 1 cut(s) 1728
PspGI CCWGG 1 cut(s) 326
PspN4I GGNNCC 5 cut(s) 261, 545, 654, 1444, 1675
PspPI GGNCC 3 cut(s) 488, 544, 2030
PspXI VCTCGAGB 3 cut(s) 177, 192, 1841
PstI CTGCAG 2 cut(s) 337, 1432
PsuI RGATCY 5 cut(s) 1118, 1279, 1549, 1573, 1673
RsaI GTAC 6 cut(s) 175, 597, 858, 964, 1060, 1885
RsaNI GTAC 6 cut(s) 174, 596, 857, 963, 1059, 1884
RseI CAYNNNNRTG 2 cut(s) 165, 2209
SacI GAGCTC 1 cut(s) 1329
SalI GTCGAC 1 cut(s) 349
SaqAI TTAA 8 cut(s) 35, 360, 1130, 1199, 1230, 1284, 1503, 1752
SatI GCNGC 4 cut(s) 994, 1079, 1838, 2167
Sau96I GGNCC 3 cut(s) 488, 544, 2030
SchI GAGTC 7 cut(s) 96, 184, 1040, 1057, 1219, 1726, 2151
ScrFI CCNGG 3 cut(s) 328, 491, 492
SduI GDGCHC 2 cut(s) 1158, 1329
SfaNI GCATC 3 cut(s) 223, 1381, 1612
SfcI CTRYAG 3 cut(s) 59, 333, 1428
Sfr274I CTCGAG 3 cut(s) 177, 192, 1841
SfuI TTCGAA 1 cut(s) 791
SinI GGWCC 1 cut(s) 544
SlaI CTCGAG 3 cut(s) 177, 192, 1841
SmaI CCCGGG 1 cut(s) 492
SmiMI CAYNNNNRTG 2 cut(s) 165, 2209
SpeI ACTAGT 1 cut(s) 965
SrfI GCCCGGGC 1 cut(s) 492
SsiI CCGC 4 cut(s) 495, 541, 715, 994
SspI AATATT 1 cut(s) 1438
SstI GAGCTC 1 cut(s) 1329
StyD4I CCNGG 3 cut(s) 326, 489, 490
StyI CCWWGG 4 cut(s) 547, 1275, 1396, 1509
TaaI ACNGT 7 cut(s) 444, 1178, 1237, 1334, 1737, 2120, 2211
TaiI ACGT 2 cut(s) 768, 1895
TatI WGTACW 1 cut(s) 595
TauI GCSGC 1 cut(s) 996
TfiI GAWTC 4 cut(s) 804, 1255, 1741, 2108
Tru1I TTAA 8 cut(s) 35, 360, 1130, 1199, 1230, 1284, 1503, 1752
Tru9I TTAA 8 cut(s) 35, 360, 1130, 1199, 1230, 1284, 1503, 1752
TscAI CASTG 5 cut(s) 1183, 1437, 2055, 2188, 2216
TseFI GTSAC 4 cut(s) 438, 893, 1297, 1467
TseI GCWGC 3 cut(s) 1078, 1837, 2166
Tsp45I GTSAC 4 cut(s) 438, 893, 1297, 1467
TspGWI ACGGA 1 cut(s) 1581
TspMI CCCGGG 1 cut(s) 490
TspRI CASTG 5 cut(s) 1183, 1437, 2055, 2188, 2216
Van91I CCANNNNNTGG 3 cut(s) 214, 1402, 2027
Vha464I CTTAAG 1 cut(s) 1283
VpaK11BI GGWCC 1 cut(s) 544
VspI ATTAAT 1 cut(s) 360
XagI CCTNNNNNAGG 1 cut(s) 1513
XapI RAATTY 5 cut(s) 457, 919, 1877, 2005, 2084
XbaI TCTAGA 4 cut(s) 1034, 1258, 1552, 1693
XceI RCATGY 3 cut(s) 1423, 2077, 2138
XcmI CCANNNNNNNNNTGG 1 cut(s) 1594
XhoI CTCGAG 3 cut(s) 177, 192, 1841
XmaI CCCGGG 1 cut(s) 490
XmiI GTMKAC 1 cut(s) 350
XmnI GAANNNNTTC 2 cut(s) 527, 2061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.