RchiOBHm_Chr2g0127891

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
42709160 .. 42711781
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49971

Sequence Viewer

Length: 2622 bp
ATGGTTCTAAGGGACGCAGAAGATCAGATTGAAGGAGCGTCCAACCAGCTTCAACAATCTGTGAAAGATGTCGAATATATAGCTTATGAAATTGAGGATGCTCTTTCCGAGTTTGTGCTTAACGTCCACGGCAACAGAGGATTATCTCGGAAAGTGCACGACATGATTCCATTTCTCCCACGAAATGAAGTAAAGAACGCAGCCAGAAATTTGTCGTCCAAGATAAGTCACATTATGGGGGAGAAGAAAGAGAGTGTTGATAAGCTAGTAACAATGCTCCGACAAATTAGCTCCAGCTCCAGACGGATACATACATGGCCTCACCAAGTTCTTGCAGAAGGTGATGAAATAGTGGGATTTAAGACACGTGAAGACGAACTGGTTAAACAGTTGGCACCAGACGACGCCCGTTTGACGATTTTGATTGCAGGTCCTGGTGGCTCGGGTAAAAGCACTGTGGTACAGAATGTATACCGGAGCGACAGGATCAGACGACGTGAAGAAGGTTCTGGGCCTTTTGGCTGCTATGCTTGGGTTCATGTGCTAAACATGGAAGTGGAGATGCTCTTATTAAAGATGTTAAGAGAATTTGAGGCCCAAAGGCAGGAAGCATATCCAGAAACTCCGACGACAGTTCTCCAGGAAGAAGATGATTCAAAAGAAAAGCTGGCGCTACTTCTACAGCGAGATAGGTTCCTAGTTGTTTTAGATAATGTTTGGAGCAGAGACGATTTGGAACGGATCGTAAGTGCCTTACCAAAAGGATTGCCTGGGAGTAAGATAATCATTACTACGCGTAACTCTGATGTAACATCTGTTGCCCCCGACTATATCCATGATTTGAGTAGTGGGTTATCATCAGAGGAAGCCCAGGAGCTGTTTTGCAAGAAGGCTTTTCAAGCTAGTGATGGACAGTTGCCACATATTCTAGAGGAGTGGGCTCAAAAAATACTCAAAAGGTGTGAAGGCATGCCCCTTCCAATTTCAGCCATTGGTAATTTGCTTGCCAAGAAGCCACAAACTCCAGTTCAGTGGAAGAGGCTACATGACAGACTTAGATATGAAATATGTAGACACGGCTCAGATCTTTCTGTTATTAGCCGTAATTTACAGCCGAGTTATAGGGATCTCCCAAGCCATCTTAAAAGTTGTTTCTTGTACTTCAGCATGTTTCCTGAAGACTACTCTATCAGCCGTGAGAGGCTAATTCGATTGTGGGTGGCCGAAGGATTCGTAGGGCCACAAGAAGGAGAACCAAAGGAGAAGGCTGCAGGCGAGTTTCTGGATGAACTTTTTAAAAGAAATTTGGTTGTAGCCAGCACCAGGGATGTGGATGGACGACGAGTAAGGAGATGCCGTGTTTTGCACCTAGTTCGAGAGATCAACATTTCTAGACAAAATAGTTTCTTAACTGTTTTGGAACGAAACTACAATCCTTCAGCTGACAGTATTCGACGCCTTTCTCTTAATAATGGTCCTGTCGAAAAGATAAGGGGTATGACTAGTGGTATTCGTACCTTACTAGTGTTCGGACATGCAACTTCTCTTTCTGAGCTTGAAATGATACTCAAAACTGGTAAGTATTTAAGTGTTTTAGATTTGCAAGGTGTAGCTTTGAAGGAGTTTCCCGAACATGTACTTGGTCTCACTCTCCTCAAGTACTTGAGTCTGAAGAAAACCCAAATTAAAACAGTTCCCCAATCCATAAAGAAGCTTGTATACTTAGAAACCTTGGATGTTAGGCACACCAGTGTGAGCTATTTACCAAATGAGATCTGGAAACTTGAAATGTTGCGCCACCTCCTGGTTTTTTGCAAAGATGGGGGAAGTGGAGGAGTGGTTCTTTCTGCTAGTAATCTTGGAGCTCTATCTTCCATACAAACGTTGTCACTCATCAAGGTAGAAACCACGAGTGAAATCAGGACAGCTTTGGAAATGTTAGCTGGTCTCAGCAAGTTGGGGCTGACAGATCTCAAAAGAGAAGATGGGGAACAATTGTGTGGTTCAATTCAGAAAATGCAGGATCTTTCCAAACTTGATGTAAGAGCAATAAGCAAGGACGAGTATCTTGATTTGGATCATATGACATTCCCTCTTGTGGCTCCTCTATATCTTCAACGTCTATATTTGGAAGGACAGCTAGAAAGGGTACCGCGGTGGATATCTGAGCTTACTAGTCTAACAAAGATCGGTTTAAAGTGGTCAAAACTGAAGGCTAGAGATGATCCACTTCAAGCCCTTCAAGCTTTGCCTAATCTGATGGAGCTCAATTTGATTGACTATTACACAGGGGAGGAGTTGACTTTTAAAGCTCAGACGTTCAAGAAACTAATGGTATTAATCATAGAACAATTTGATGAGCTAAAGGTAGTGAAAATTGAAGATGGGGCAATGCCTCAGCTTAAGCGGTTAACCATGTGCAAGTGTCAGAATTTGAAGTCACTTCCAGAAGGAGTGGCAGGTCTTAATGCATTTGAAGAAATCAGATGGAATGAGATGCCCGATGAATTCACTACAATGGTTCAAGAACGTTGTTTCAGCATATTCGAGTCATCCATTCTTAGAGATCTTCCGAAATCGGAATATTTTTCATTGCAGAAACACAAGGTGATTATGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

873

Amino Acids

99.44

Weight (kDa)

7.05

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 123 - 303 3.4e-26 NB-ARC domain
WHD_DRP PF23559 390 - 460 1.1e-15 Disease resistance protein Winged helix domain
LRR_14 PF23598 504 - 813 1.2e-40 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 419, 2450
Acc65I GGTACC 1 cut(s) 2149
AccB1I GGYRCC 2 cut(s) 394, 2149
AccB7I CCANNNNNTGG 1 cut(s) 1804
AccI GTMKAC 3 cut(s) 471, 1072, 1719
AccII CGCG 2 cut(s) 796, 2155
AciI CCGC 3 cut(s) 2153, 2155, 2407
AclI AACGTT 2 cut(s) 1883, 2530
AclWI GGATC 6 cut(s) 494, 749, 1134, 2031, 2085, 2219
AcoI YGGCCR 1 cut(s) 1221
AcsI RAATTY 5 cut(s) 208, 587, 1303, 2431, 2507
AcuI CTGAAG 5 cut(s) 1147, 1197, 1422, 1691, 2231
AcvI CACGTG 1 cut(s) 368
AcyI GRCGYC 2 cut(s) 405, 1456
AdeI CACNNNGTG 1 cut(s) 2608
AfaI GTAC 6 cut(s) 462, 1160, 1516, 1638, 1661, 2151
AfiI CCNNNNNNNGG 5 cut(s) 604, 1247, 1323, 1804, 2098
AflII CTTAAG 1 cut(s) 2402
AflIII ACRYGT 3 cut(s) 365, 794, 1633
AhlI ACTAGT 3 cut(s) 1502, 1522, 2174
AjiI CACGTC 1 cut(s) 497
AjnI CCWGG 6 cut(s) 433, 639, 769, 870, 1322, 1803
AjuI GAANNNNNNNTTGG 2 cut(s) 1623, 1655
AleI CACNNNNGTG 2 cut(s) 1749, 1751
AloI GAACNNNNNNTCC 2 cut(s) 1824, 1856
Alw21I GWGCWC 3 cut(s) 159, 1867, 2268
Alw26I GTCTC 3 cut(s) 720, 1649, 1952
Alw44I GTGCAC 1 cut(s) 155
AlwI GGATC 6 cut(s) 494, 749, 1134, 2031, 2085, 2219
AlwNI CAGNNNCTG 2 cut(s) 434, 877
Ama87I CYCGRG 1 cut(s) 442
AoxI GGCC 5 cut(s) 317, 512, 594, 1221, 1238
ApaLI GTGCAC 1 cut(s) 155
ApeKI GCWGC 3 cut(s) 200, 522, 1268
ApoI RAATTY 5 cut(s) 208, 587, 1303, 2431, 2507
AseI ATTAAT 1 cut(s) 2339
Asp718I GGTACC 1 cut(s) 2149
AspLEI GCGC 2 cut(s) 673, 1797
AspS9I GGNCC 5 cut(s) 431, 512, 595, 1238, 1475
AsuHPI GGTGA 3 cut(s) 314, 353, 2620
AvaI CYCGRG 1 cut(s) 442
AvaII GGWCC 2 cut(s) 431, 1475
BaeGI GKGCMC 1 cut(s) 159
BaeI ACNNNNGTAYC 2 cut(s) 2141, 2174
BanI GGYRCC 2 cut(s) 394, 2149
BanII GRGCYC 3 cut(s) 943, 1867, 2268
BarI GAAGNNNNNNTAC 2 cut(s) 1703, 1735
BauI CACGAG 1 cut(s) 1909
BbrPI CACGTG 1 cut(s) 368
BbsI GAAGAC 2 cut(s) 378, 1185
Bbv12I GWGCWC 3 cut(s) 159, 1867, 2268
BbvCI CCTCAGC 1 cut(s) 2397
BbvI GCAGC 3 cut(s) 212, 509, 1255
BccI CCATC 8 cut(s) 902, 1146, 1328, 1814, 1979, 2254, 2378, 2481
BceAI ACGGC 5 cut(s) 145, 1086, 1093, 1179, 1341
BcgI CGANNNNNNTGC 2 cut(s) 1355, 1389
BciT130I CCWGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
BciVI GTATCC 1 cut(s) 300
BcoDI GTCTC 3 cut(s) 720, 1649, 1952
BcuI ACTAGT 3 cut(s) 1502, 1522, 2174
BfmI CTRYAG 2 cut(s) 680, 1269
BfoI RGCGCY 1 cut(s) 674
BfrI CTTAAG 1 cut(s) 2402
BfuAI ACCTGC 2 cut(s) 419, 2450
BfuI GTATCC 1 cut(s) 300
BglII AGATCT 4 cut(s) 1084, 1773, 1969, 2566
BisI GCNGC 3 cut(s) 201, 523, 1269
BlsI GCNGC 3 cut(s) 202, 524, 1270
BmcAI AGTACT 1 cut(s) 1661
Bme1390I CCNGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
Bme18I GGWCC 2 cut(s) 431, 1475
BmeT110I CYCGRG 1 cut(s) 442
BmgBI CACGTC 1 cut(s) 497
BmgT120I GGNCC 5 cut(s) 431, 512, 595, 1238, 1475
BmiI GGNNCC 4 cut(s) 396, 695, 2103, 2151
BmrFI CCNGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
BmsI GCATC 4 cut(s) 88, 552, 1343, 2487
BpiI GAAGAC 2 cut(s) 378, 1185
BpmI CTGGAG 4 cut(s) 277, 283, 623, 1008
Bpu10I CCTNAGC 1 cut(s) 2397
BpuEI CTTGAG 2 cut(s) 1640, 1684
BsaAI YACGTR 1 cut(s) 368
BsaBI GATNNNNATC 1 cut(s) 2076
BsaHI GRCGYC 2 cut(s) 405, 1456
BsaI GGTCTC 2 cut(s) 1649, 1952
BsaJI CCNNGG 6 cut(s) 127, 770, 870, 1323, 1731, 2153
BsaWI WCCGGW 1 cut(s) 474
BsaXI ACNNNNNCTCC 4 cut(s) 1342, 1372, 1824, 1854
Bsc4I CCNNNNNNNGG 5 cut(s) 604, 1247, 1323, 1804, 2098
Bse1I ACTGG 4 cut(s) 384, 1025, 1579, 1749
Bse3DI GCAATG 2 cut(s) 2397, 2591
Bse8I GATNNNNATC 1 cut(s) 2076
BseBI CCWGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
BseDI CCNNGG 6 cut(s) 127, 770, 870, 1323, 1731, 2153
BseGI GGATG 6 cut(s) 103, 1291, 1333, 1339, 1741, 2552
BseJI GATNNNNATC 1 cut(s) 2076
BseLI CCNNNNNNNGG 5 cut(s) 604, 1247, 1323, 1804, 2098
BseMI GCAATG 2 cut(s) 2397, 2591
BseMII CTCAG 6 cut(s) 1095, 1542, 1963, 2157, 2327, 2411
BseNI ACTGG 4 cut(s) 384, 1025, 1579, 1749
BseRI GAGGAG 5 cut(s) 947, 1643, 1848, 2094, 2309
BseSI GKGCMC 1 cut(s) 159
BseXI GCAGC 3 cut(s) 212, 509, 1255
Bsh1236I CGCG 2 cut(s) 796, 2155
BshFI GGCC 5 cut(s) 319, 514, 596, 1223, 1240
BshNI GGYRCC 2 cut(s) 394, 2149
BsiHKAI GWGCWC 3 cut(s) 159, 1867, 2268
BsiHKCI CYCGRG 1 cut(s) 442
BsiSI CCGG 1 cut(s) 475
BslFI GGGAC 1 cut(s) 26
BslI CCNNNNNNNGG 5 cut(s) 604, 1247, 1323, 1804, 2098
BsmAI GTCTC 3 cut(s) 720, 1649, 1952
BsmBI CGTCTC 1 cut(s) 720
BsmFI GGGAC 1 cut(s) 26
BsnI GGCC 5 cut(s) 319, 514, 596, 1223, 1240
Bso31I GGTCTC 2 cut(s) 1649, 1952
BsoBI CYCGRG 1 cut(s) 442
Bsp1286I GDGCHC 4 cut(s) 159, 943, 1867, 2268
BspACI CCGC 3 cut(s) 2153, 2155, 2407
BspANI GGCC 5 cut(s) 319, 514, 596, 1223, 1240
BspCNI CTCAG 6 cut(s) 1094, 1543, 1962, 2158, 2326, 2410
BspFNI CGCG 2 cut(s) 796, 2155
BspLI GGNNCC 4 cut(s) 396, 695, 2103, 2151
BspMAI CTGCAG 1 cut(s) 1273
BspMI ACCTGC 2 cut(s) 419, 2450
BspPI GGATC 6 cut(s) 494, 749, 1134, 2031, 2085, 2219
BspT107I GGYRCC 2 cut(s) 394, 2149
BspTI CTTAAG 1 cut(s) 2402
BspTNI GGTCTC 2 cut(s) 1649, 1952
BsrDI GCAATG 2 cut(s) 2397, 2591
BsrI ACTGG 4 cut(s) 384, 1025, 1579, 1749
BssECI CCNNGG 6 cut(s) 127, 770, 870, 1323, 1731, 2153
BssNAI GTATAC 2 cut(s) 472, 1720
BssNI GRCGYC 2 cut(s) 405, 1456
BssSI CACGAG 1 cut(s) 1909
BssT1I CCWWGG 1 cut(s) 1731
Bst1107I GTATAC 2 cut(s) 472, 1720
Bst2BI CACGAG 1 cut(s) 1909
Bst2UI CCWGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
Bst4CI ACNGT 7 cut(s) 390, 457, 634, 915, 1414, 1448, 1693
Bst6I CTCTTC 1 cut(s) 1031
BstACI GRCGYC 2 cut(s) 405, 1456
BstAFI CTTAAG 1 cut(s) 2402
BstBAI YACGTR 1 cut(s) 368
BstC8I GCNNGC 5 cut(s) 669, 971, 1005, 1273, 1318
BstDSI CCRYGG 2 cut(s) 127, 2153
BstF5I GGATG 6 cut(s) 103, 1291, 1333, 1339, 1741, 2552
BstFNI CGCG 2 cut(s) 796, 2155
BstH2I RGCGCY 1 cut(s) 674
BstHHI GCGC 2 cut(s) 673, 1797
BstMAI GTCTC 3 cut(s) 720, 1649, 1952
BstMWI GCNNNNNNNGC 2 cut(s) 899, 2243
BstNI CCWGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
BstNSI RCATGY 4 cut(s) 973, 1171, 1538, 1637
BstSCI CCNGG 6 cut(s) 433, 639, 769, 870, 1322, 1803
BstSFI CTRYAG 2 cut(s) 680, 1269
BstSLI GKGCMC 1 cut(s) 159
BstUI CGCG 2 cut(s) 796, 2155
BstV1I GCAGC 3 cut(s) 212, 509, 1255
BstV2I GAAGAC 2 cut(s) 378, 1185
BstX2I RGATCY 6 cut(s) 1084, 1126, 1773, 1969, 2023, 2566
BstXI CCANNNNNNTGG 2 cut(s) 1032, 1330
BstYI RGATCY 6 cut(s) 1084, 1126, 1773, 1969, 2023, 2566
BstZ17I GTATAC 2 cut(s) 472, 1720
BsuI GTATCC 1 cut(s) 300
BsuRI GGCC 5 cut(s) 319, 514, 596, 1223, 1240
BtgI CCRYGG 2 cut(s) 127, 2153
BtrI CACGTC 1 cut(s) 497
BtsCI GGATG 6 cut(s) 103, 1291, 1333, 1339, 1741, 2552
BtsIMutI CAGTG 3 cut(s) 453, 1037, 1756
BveI ACCTGC 2 cut(s) 419, 2450
Cac8I GCNNGC 5 cut(s) 669, 971, 1005, 1273, 1318
CaiI CAGNNNCTG 2 cut(s) 434, 877
CfoI GCGC 2 cut(s) 673, 1797
Cfr13I GGNCC 5 cut(s) 431, 512, 595, 1238, 1475
Cfr42I CCGCGG 1 cut(s) 2156
CseI GACGC 4 cut(s) 23, 27, 413, 1464
Csp6I GTAC 6 cut(s) 461, 1159, 1515, 1637, 1660, 2150
CviQI GTAC 6 cut(s) 461, 1159, 1515, 1637, 1660, 2150
DraI TTTAAA 3 cut(s) 1297, 2196, 2308
DraIII CACNNNGTG 1 cut(s) 2608
EaeI YGGCCR 1 cut(s) 1221
Eam1104I CTCTTC 1 cut(s) 1031
EarI CTCTTC 1 cut(s) 1031
Ecl136II GAGCTC 2 cut(s) 1865, 2266
Eco130I CCWWGG 1 cut(s) 1731
Eco24I GRGCYC 3 cut(s) 943, 1867, 2268
Eco31I GGTCTC 2 cut(s) 1649, 1952
Eco32I GATATC 1 cut(s) 2163
Eco47I GGWCC 2 cut(s) 431, 1475
Eco53kI GAGCTC 2 cut(s) 1865, 2266
Eco57I CTGAAG 5 cut(s) 1147, 1197, 1422, 1691, 2231
Eco72I CACGTG 1 cut(s) 368
Eco88I CYCGRG 1 cut(s) 442
EcoICRI GAGCTC 2 cut(s) 1865, 2266
EcoO109I RGGNCCY 1 cut(s) 431
EcoRI GAATTC 1 cut(s) 2507
EcoRII CCWGG 6 cut(s) 433, 639, 769, 870, 1322, 1803
EcoRV GATATC 1 cut(s) 2163
EcoT14I CCWWGG 1 cut(s) 1731
EcoT22I ATGCAT 2 cut(s) 2473, 2619
EcoT38I GRGCYC 3 cut(s) 943, 1867, 2268
ErhI CCWWGG 1 cut(s) 1731
Esp3I CGTCTC 1 cut(s) 720
FaqI GGGAC 1 cut(s) 26
FauNDI CATATG 1 cut(s) 2082
FblI GTMKAC 3 cut(s) 471, 1072, 1719
Fnu4HI GCNGC 3 cut(s) 201, 523, 1269
FokI GGATG 6 cut(s) 110, 1298, 1340, 1346, 1748, 2539
FriOI GRGCYC 3 cut(s) 943, 1867, 2268
Fsp4HI GCNGC 3 cut(s) 201, 523, 1269
GlaI GCGC 2 cut(s) 672, 1796
GluI GCNGC 3 cut(s) 201, 523, 1269
GsuI CTGGAG 4 cut(s) 277, 283, 623, 1008
HaeII RGCGCY 1 cut(s) 674
HaeIII GGCC 5 cut(s) 319, 514, 596, 1223, 1240
HapII CCGG 1 cut(s) 475
HgaI GACGC 4 cut(s) 23, 27, 413, 1464
HhaI GCGC 2 cut(s) 673, 1797
Hin1I GRCGYC 2 cut(s) 405, 1456
Hin6I GCGC 2 cut(s) 671, 1795
HinP1I GCGC 2 cut(s) 671, 1795
HincII GTYRAC 2 cut(s) 2301, 2412
HindII GTYRAC 2 cut(s) 2301, 2412
HindIII AAGCTT 2 cut(s) 1712, 2244
HinfI GANTC 5 cut(s) 166, 653, 1230, 1666, 2549
HpaI GTTAAC 1 cut(s) 2412
HpaII CCGG 1 cut(s) 475
HphI GGTGA 3 cut(s) 314, 353, 2620
Hpy166II GTNNAC 7 cut(s) 127, 157, 472, 1073, 1720, 2301, 2412
Hpy8I GTNNAC 7 cut(s) 127, 157, 472, 1073, 1720, 2301, 2412
Hpy99I CGWCG 5 cut(s) 407, 498, 631, 1344, 1458
HpyCH4III ACNGT 7 cut(s) 390, 457, 634, 915, 1414, 1448, 1693
HpyCH4IV ACGT 7 cut(s) 123, 367, 496, 1883, 2119, 2318, 2530
HpyF10VI GCNNNNNNNGC 2 cut(s) 899, 2243
HpySE526I ACGT 7 cut(s) 123, 367, 496, 1883, 2119, 2318, 2530
Hsp92I GRCGYC 2 cut(s) 405, 1456
HspAI GCGC 2 cut(s) 671, 1795
KpnI GGTACC 1 cut(s) 2153
KspAI GTTAAC 1 cut(s) 2412
KspI CCGCGG 1 cut(s) 2156
Lsp1109I GCAGC 3 cut(s) 212, 509, 1255
LweI GCATC 4 cut(s) 88, 552, 1343, 2487
MaeII ACGT 7 cut(s) 123, 367, 496, 1883, 2119, 2318, 2530
MaeIII GTNAC 6 cut(s) 227, 268, 797, 808, 1887, 2439
MfeI CAATTG 1 cut(s) 1994
MflI RGATCY 6 cut(s) 1084, 1126, 1773, 1969, 2023, 2566
MhlI GDGCHC 4 cut(s) 159, 943, 1867, 2268
MluI ACGCGT 1 cut(s) 794
MlyI GAGTC 2 cut(s) 1675, 2558
MmeI TCCRAC 3 cut(s) 66, 304, 650
Mph1103I ATGCAT 2 cut(s) 2473, 2619
MslI CAYNNNNRTG 4 cut(s) 554, 1749, 1751, 2516
MspA1I CMGCKG 2 cut(s) 1442, 2155
MspCI CTTAAG 1 cut(s) 2402
MspI CCGG 1 cut(s) 475
MspR9I CCNGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
MunI CAATTG 1 cut(s) 1994
MvaI CCWGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
MvnI CGCG 2 cut(s) 796, 2155
MwoI GCNNNNNNNGC 2 cut(s) 899, 2243
NdeI CATATG 1 cut(s) 2082
NlaIV GGNNCC 4 cut(s) 396, 695, 2103, 2151
NmeAIII GCCGAG 1 cut(s) 1140
NmuCI GTSAC 3 cut(s) 227, 1887, 2439
NsiI ATGCAT 2 cut(s) 2473, 2619
NspI RCATGY 4 cut(s) 973, 1171, 1538, 1637
OliI CACNNNNGTG 2 cut(s) 1749, 1751
PaeI GCATGC 1 cut(s) 973
PciI ACATGT 1 cut(s) 1633
PfeI GAWTC 3 cut(s) 166, 653, 1230
PflMI CCANNNNNTGG 1 cut(s) 1804
PfoI TCCNGGA 1 cut(s) 639
PkrI GCNGC 3 cut(s) 202, 524, 1270
PleI GAGTC 2 cut(s) 1674, 2557
PmaCI CACGTG 1 cut(s) 368
PmlI CACGTG 1 cut(s) 368
PpsI GAGTC 2 cut(s) 1674, 2557
Ppu21I YACGTR 1 cut(s) 368
PpuMI RGGWCCY 1 cut(s) 431
PscI ACATGT 1 cut(s) 1633
PshBI ATTAAT 1 cut(s) 2339
Psp124BI GAGCTC 2 cut(s) 1867, 2268
Psp1406I AACGTT 2 cut(s) 1883, 2530
Psp5II RGGWCCY 1 cut(s) 431
Psp6I CCWGG 6 cut(s) 433, 639, 769, 870, 1322, 1803
PspCI CACGTG 1 cut(s) 368
PspGI CCWGG 6 cut(s) 433, 639, 769, 870, 1322, 1803
PspN4I GGNNCC 4 cut(s) 396, 695, 2103, 2151
PspPI GGNCC 5 cut(s) 431, 512, 595, 1238, 1475
PspPPI RGGWCCY 1 cut(s) 431
PstI CTGCAG 1 cut(s) 1273
PstNI CAGNNNCTG 2 cut(s) 434, 877
PsuI RGATCY 6 cut(s) 1084, 1126, 1773, 1969, 2023, 2566
PvuII CAGCTG 1 cut(s) 1442
RsaI GTAC 6 cut(s) 462, 1160, 1516, 1638, 1661, 2151
RsaNI GTAC 6 cut(s) 461, 1159, 1515, 1637, 1660, 2150
RseI CAYNNNNRTG 4 cut(s) 554, 1749, 1751, 2516
SacI GAGCTC 2 cut(s) 1867, 2268
SacII CCGCGG 1 cut(s) 2156
SatI GCNGC 3 cut(s) 201, 523, 1269
Sau96I GGNCC 5 cut(s) 431, 512, 595, 1238, 1475
ScaI AGTACT 1 cut(s) 1661
SchI GAGTC 2 cut(s) 1675, 2558
ScrFI CCNGG 6 cut(s) 435, 641, 771, 872, 1324, 1805
SduI GDGCHC 4 cut(s) 159, 943, 1867, 2268
SfaNI GCATC 4 cut(s) 88, 552, 1343, 2487
SfcI CTRYAG 2 cut(s) 680, 1269
Sfr303I CCGCGG 1 cut(s) 2156
SgrBI CCGCGG 1 cut(s) 2156
SinI GGWCC 2 cut(s) 431, 1475
SmiMI CAYNNNNRTG 4 cut(s) 554, 1749, 1751, 2516
SmlI CTYRAG 3 cut(s) 1655, 1663, 2402
SmoI CTYRAG 3 cut(s) 1655, 1663, 2402
SpeI ACTAGT 3 cut(s) 1502, 1522, 2174
SphI GCATGC 1 cut(s) 973
SsiI CCGC 3 cut(s) 2153, 2155, 2407
SspI AATATT 1 cut(s) 2585
SstI GAGCTC 2 cut(s) 1867, 2268
StyD4I CCNGG 6 cut(s) 433, 639, 769, 870, 1322, 1803
StyI CCWWGG 1 cut(s) 1731
TaaI ACNGT 7 cut(s) 390, 457, 634, 915, 1414, 1448, 1693
TaiI ACGT 7 cut(s) 126, 370, 499, 1886, 2122, 2321, 2533
TaqI TCGA 6 cut(s) 72, 1210, 1375, 1453, 1482, 2547
TatI WGTACW 3 cut(s) 1158, 1636, 1659
TfiI GAWTC 3 cut(s) 166, 653, 1230
TscAI CASTG 3 cut(s) 460, 1037, 1756
TseFI GTSAC 3 cut(s) 227, 1887, 2439
TseI GCWGC 3 cut(s) 200, 522, 1268
Tsp45I GTSAC 3 cut(s) 227, 1887, 2439
TspDTI ATGAA 8 cut(s) 102, 201, 360, 527, 1077, 1302, 2520, 2580
TspGWI ACGGA 2 cut(s) 319, 754
TspRI CASTG 3 cut(s) 460, 1037, 1756
Van91I CCANNNNNTGG 1 cut(s) 1804
Vha464I CTTAAG 1 cut(s) 2402
VneI GTGCAC 1 cut(s) 155
VpaK11BI GGWCC 2 cut(s) 431, 1475
VspI ATTAAT 1 cut(s) 2339
XapI RAATTY 5 cut(s) 208, 587, 1303, 2431, 2507
XbaI TCTAGA 2 cut(s) 928, 1391
XceI RCATGY 4 cut(s) 973, 1171, 1538, 1637
XcmI CCANNNNNNNNNTGG 1 cut(s) 1773
XmiI GTMKAC 3 cut(s) 471, 1072, 1719
ZrmI AGTACT 1 cut(s) 1661
Zsp2I ATGCAT 2 cut(s) 2473, 2619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.