Rh2BG613300

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
83569222 .. 83571964
2743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG613300.1

Sequence Viewer

Length: 2661 bp
ATGGCTGATGCTATTTCAGCCGCATTGCTGTTAGTTGAGACGGCGATAATCTGCACCGACCAATTACACAGTCGTACGAGTAGTGTCCGTAAGGATCTTGAAAGGGCCCGGAATTGTTTGGCGAGGTTGCAACAGTGGGATAATCACACAAATCCCCAAGCTAGGGAGAAACAGGTCCAAGATTTGGCTTGTAATATTGAGGATGCTATTAACGAGTACCTGCTTCAGGTTTCACAGCATTCCCATACCAATCGGTTCTCTAAGCTGGCGCACAACGTTGGTCATTTCATCCCCGACTGGATAGCAAGCAGTAAGTTATCCTCCAGCATTGATGAACTGGAACGAGACCTGAATTTGGTTACGTTACTAGATTCAGTACATTCAAATGGTCCCCAAGAAGGCCGCCCAAGCTCCAGCACAGGACCTCAGGGGGCAACTTTGACCCACAGATTTCTTGAAGACCATGAAATAGTGGGCTATGATGAAGAGAAAACACGACTTTTCCAACACTTGGGAGAAAGAAATCCAGAGCTTTTGACAATTGTGATTGTAGGTCCTGGAGGCTCCGGCAAAACTACACTCGTAAAGAATGTTTACCAAAGCGAAAGGGTCAGCAGCTTGTTTCATTTTCAAGCTTGGATTGATGTGCCACTCGATCTTGACCAACTCCTGCCGAAGTTGTTAAGAAGATTTAAGCAGGAAGTAGATCCTCATGAAGATATCAGTGACCTTCAAGAGAAACTGAGAAGAATTTTGGAGAATAAGAAGTTTTTGGTTGTCCTGGATAATGTTTGGAGCCACGAAGCTTTCGAATCCATTGTAAATGCACTACCAAAAACGGAGGGTAGTAAACTAATCGTAATTACTCGGAACATTGATGTAGCTCCGGTTTCTTCCAATTATATTCATGATTTGTGTGCTGGGTTATCATCGAAGAAAGCCAACCAGCTATTCTGCAAGAAGGCCTTTCCTGATGTTGTACGAAATATTTGTCCAACCCATCTGGAGGACTGGGCTGAACAGATTGTAACGAGGTGTGAAGGTATGCCCTGGGCAATTTCACAAATCGGCACTTTGCTAGCAAGGACGCCGAGAGTAGCAGTTGAGTGGAAGAAGATGCATGACACACTAGGATCCGATCTCTCCATTGCTAGCAGTATTTCACATTATAGGGATCTGCCAAGCAATCACAAAGAATGTTTCCTGTACTTCGGTATGTTTCCAGAAGACGAAACCATCAGCCGAGAGAGGCTAATACGGTTGTGGATAGCCGAAGGATTTGTGAGACCAGACGGAGTAAAAACGGTGGAGGCAGTTGCACAGACTATTCTGACTAATCTCATTGACAGAAATTTGGTTGTGGTCAGTGCGAGGGAAATCGATGGACGAGTCAAGAATTGTCGTGTTTCCAACCTTGTTCGTGAGAAAATTCGACGCCTTTCAGTTCAGTGTGATATCAATTTGTTAAGGAACATAGACCTGAGTCGTATGACTCATACTCGTACCTTACTAGTTTTCCGGCAGACAGCCAATAGGTCTGAGCTTCATATGGTGCTTAAAGCCTGTAAGCTCTTACGGGTCTTCGGTTTGCAAGGTGTACCTGAATTGGTGAACTTTCCGGAATCTGTAATTAGTCTCACCTTATTAAGGTACTTGAGTGTCAGGCAAACCAACATTGAAAGTGTTCCAAGATCCATAGAGAAGCTTGGATTGTTGGAAACCTTAGAACTTAAAGACACCCTGGTGACCAATTTGCCAAAAGGGATTGGTAAACTCCACCATTTGCGCCACCTTTTGGTGTATTGCAATGCTGTCAACAATAATATGATGTTTGGAGCTGCACAAGGAGTGGAGTTTTCTACTAGCAAAATAAGTGCTTTATCTATTTCAAATTCGTTACAAAAGTTGTCTCTGATTAAGGTAAACACCAACAAAAAATTCTTGAAAGCCTTAGGAGAGTTGAAAGATCTTAGAAGGTTGGGGCTGGTAGATCTTCATAGAGAAGATGGAAGAGAATTGTGTTGCACCATTCAGAAAATGGATGATCTTTCGACATTGGATGTAAGAGCAACAAGCGAGGATGAATATCTTGACTTGGATCACATGCAATCCGGCTCCCCGCCTCTCCTTCTCCAACATCTATATTTAAAAGGGCGGCTAAAAAGGGTACCAGAGTGGATTCCCAAGCTTACCAGTCTCAAAAAGATTGGTTTAAAATGGTCAAAGATGGATGCTGACGCTGAGCCACTTACGGCCCTTCAAGATTTGCCCAACCTCATGGAGCTCGATTTGGTTGACTATTACACTGGCCAGGTGTTGGGTTTCGGAGATGAAACTTTCAAGAAACTAGTGGCATTAAGTATAGACAAATTTGATAAGCTAAATTTGATCTCAATAGGTGAGAAGGCAATGCCTATGCTCAAGAAGCTAACCATCTCGAGATGTCCGGATTTGAAGTTACTTCCATTTTCAAGTGGTGATCTTGAATTGCTGGAAGAATTGCTTCTATTTGACATGCCCAATGAATTCATTGCTGAGTTTGAAACAGACAGCGAACGACGTGAGGATTTAAAGCATGTTGGAGTCATTCATTATTCTCGGCATCCAGGAAGCTACCAATCTGATGGATTCAAAGATCTTTCTCCATCAAAATGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

886

Amino Acids

100.53

Weight (kDa)

6.67

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 162 - 325 3.8e-26 NB-ARC domain
AAA_22 PF13401 181 - 264 4.7e-06 AAA domain
WHD_DRP PF23559 406 - 474 1.6e-16 Disease resistance protein Winged helix domain
LRR_14 PF23598 499 - 813 1.6e-35 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 228
Acc65I GGTACC 1 cut(s) 2167
AccB1I GGYRCC 1 cut(s) 2167
AccB7I CCANNNNNTGG 4 cut(s) 184, 511, 1795, 2317
AccIII TCCGGA 2 cut(s) 1618, 2446
AciI CCGC 4 cut(s) 21, 403, 2120, 2155
AclI AACGTT 1 cut(s) 276
AclWI GGATC 7 cut(s) 102, 701, 1128, 1141, 1182, 1686, 2106
AcoI YGGCCR 1 cut(s) 2308
AcsI RAATTY 9 cut(s) 352, 750, 1351, 1428, 1891, 1937, 2369, 2383, 2525
AcuI CTGAAG 1 cut(s) 209
AcyI GRCGYC 2 cut(s) 1088, 1435
AfaI GTAC 9 cut(s) 76, 218, 378, 981, 1208, 1504, 1599, 1652, 2169
AhlI ACTAGT 2 cut(s) 1510, 2347
AjiI CACGTC 1 cut(s) 2561
AjnI CCWGG 6 cut(s) 556, 780, 1049, 1740, 2310, 2605
AjuI GAANNNNNNNTTGG 4 cut(s) 935, 967, 1922, 1954
AleI CACNNNNGTG 1 cut(s) 1742
Alw21I GWGCWC 1 cut(s) 2286
Alw26I GTCTC 6 cut(s) 32, 339, 1279, 1640, 1914, 2201
AlwI GGATC 7 cut(s) 102, 701, 1128, 1141, 1182, 1686, 2106
Ama87I CYCGRG 1 cut(s) 2437
Aor13HI TCCGGA 2 cut(s) 1618, 2446
AoxI GGCC 5 cut(s) 105, 400, 963, 2253, 2308
ApaI GGGCCC 1 cut(s) 109
ApeKI GCWGC 2 cut(s) 615, 1838
ApoI RAATTY 9 cut(s) 352, 750, 1351, 1428, 1891, 1937, 2369, 2383, 2525
ArsI GACNNNNNNTTYG 2 cut(s) 976, 1008
Asp700I GAANNNNTTC 2 cut(s) 1683, 2502
Asp718I GGTACC 1 cut(s) 2167
AspLEI GCGC 2 cut(s) 271, 1788
AspS9I GGNCC 7 cut(s) 105, 106, 175, 389, 422, 554, 2254
AsuC2I CCSGG 1 cut(s) 109
AsuHPI GGTGA 5 cut(s) 1621, 1630, 1756, 2411, 2489
AsuII TTCGAA 1 cut(s) 810
AsuNHI GCTAGC 2 cut(s) 1078, 1151
AvaI CYCGRG 1 cut(s) 2437
AvaII GGWCC 4 cut(s) 175, 389, 422, 554
AxyI CCTNAGG 2 cut(s) 426, 1951
BaeGI GKGCMC 1 cut(s) 109
BaeI ACNNNNGTAYC 4 cut(s) 1642, 1675, 2159, 2192
BalI TGGCCA 1 cut(s) 2310
BamHI GGATCC 1 cut(s) 1133
BanI GGYRCC 1 cut(s) 2167
BanII GRGCYC 2 cut(s) 109, 2286
BbsI GAAGAC 3 cut(s) 465, 1233, 1573
Bbv12I GWGCWC 1 cut(s) 2286
BbvI GCAGC 2 cut(s) 627, 1825
BccI CCATC 8 cut(s) 1008, 1244, 1376, 2000, 2221, 2441, 2618, 2653
BceAI ACGGC 2 cut(s) 57, 2268
BciT130I CCWGG 6 cut(s) 558, 782, 1051, 1742, 2312, 2607
BcnI CCSGG 1 cut(s) 109
BcoDI GTCTC 6 cut(s) 32, 339, 1279, 1640, 1914, 2201
BcuI ACTAGT 2 cut(s) 1510, 2347
BfaI CTAG 8 cut(s) 162, 368, 1079, 1130, 1152, 1511, 1863, 2348
BfuAI ACCTGC 1 cut(s) 228
BglII AGATCT 3 cut(s) 1966, 1990, 2635
BisI GCNGC 5 cut(s) 21, 403, 616, 1839, 2156
BlpI GCTNAGC 1 cut(s) 2241
BlsI GCNGC 5 cut(s) 22, 404, 617, 1840, 2157
Bme1390I CCNGG 7 cut(s) 109, 558, 782, 1051, 1742, 2312, 2607
Bme18I GGWCC 4 cut(s) 175, 389, 422, 554
BmeT110I CYCGRG 1 cut(s) 2437
BmgBI CACGTC 1 cut(s) 2561
BmgT120I GGNCC 7 cut(s) 105, 106, 175, 389, 422, 554, 2254
BmiI GGNNCC 7 cut(s) 107, 391, 565, 797, 1135, 2116, 2169
BmrFI CCNGG 7 cut(s) 109, 558, 782, 1051, 1742, 2312, 2607
BmrI ACTGGG 1 cut(s) 1021
BmsI GCATC 4 cut(s) 193, 1107, 2221, 2611
BmtI GCTAGC 2 cut(s) 1082, 1155
BmuI ACTGGG 1 cut(s) 1021
BoxI GACNNNNGTC 1 cut(s) 1482
BpiI GAAGAC 3 cut(s) 465, 1233, 1573
BpmI CTGGAG 4 cut(s) 307, 397, 579, 1025
Bpu1102I GCTNAGC 1 cut(s) 2241
Bpu14I TTCGAA 1 cut(s) 810
BpuEI CTTGAG 2 cut(s) 1675, 2405
BpuMI CCSGG 1 cut(s) 109
Bsa29I ATCGAT 1 cut(s) 1380
BsaBI GATNNNNATC 1 cut(s) 2085
BsaHI GRCGYC 2 cut(s) 1088, 1435
BsaI GGTCTC 2 cut(s) 339, 1279
BsaJI CCNNGG 3 cut(s) 1049, 1050, 1740
BsaWI WCCGGW 3 cut(s) 886, 1618, 2446
Bse1I ACTGG 5 cut(s) 302, 342, 1016, 2193, 2311
Bse21I CCTNAGG 2 cut(s) 426, 1951
Bse3DI GCAATG 5 cut(s) 23, 1146, 1813, 2415, 2529
Bse8I GATNNNNATC 1 cut(s) 2085
BseAI TCCGGA 2 cut(s) 1618, 2446
BseBI CCWGG 6 cut(s) 558, 782, 1051, 1742, 2312, 2607
BseCI ATCGAT 1 cut(s) 1380
BseDI CCNNGG 3 cut(s) 1049, 1050, 1740
BseGI GGATG 7 cut(s) 208, 288, 2047, 2065, 2086, 2236, 2602
BseJI GATNNNNATC 1 cut(s) 2085
BseMI GCAATG 5 cut(s) 23, 1146, 1813, 2415, 2529
BseMII CTCAG 6 cut(s) 440, 734, 1472, 1530, 2232, 2526
BseNI ACTGG 5 cut(s) 302, 342, 1016, 2193, 2311
BseSI GKGCMC 1 cut(s) 109
BseXI GCAGC 2 cut(s) 627, 1825
BseYI CCCAGC 1 cut(s) 920
BsgI GTGCAG 2 cut(s) 37, 1824
BshFI GGCC 5 cut(s) 107, 402, 965, 2255, 2310
BshNI GGYRCC 1 cut(s) 2167
BshVI ATCGAT 1 cut(s) 1380
BsiHKAI GWGCWC 1 cut(s) 2286
BsiHKCI CYCGRG 1 cut(s) 2437
BsiSI CCGG 7 cut(s) 109, 567, 887, 1519, 1619, 2112, 2447
BsiWI CGTACG 1 cut(s) 74
BslFI GGGAC 1 cut(s) 375
BsmAI GTCTC 6 cut(s) 32, 339, 1279, 1640, 1914, 2201
BsmBI CGTCTC 1 cut(s) 32
BsmFI GGGAC 1 cut(s) 375
BsmI GAATGC 1 cut(s) 238
BsnI GGCC 5 cut(s) 107, 402, 965, 2255, 2310
Bso31I GGTCTC 2 cut(s) 339, 1279
BsoBI CYCGRG 1 cut(s) 2437
Bsp119I TTCGAA 1 cut(s) 810
Bsp120I GGGCCC 1 cut(s) 105
Bsp1286I GDGCHC 2 cut(s) 109, 2286
Bsp13I TCCGGA 2 cut(s) 1618, 2446
Bsp1720I GCTNAGC 1 cut(s) 2241
BspACI CCGC 4 cut(s) 21, 403, 2120, 2155
BspANI GGCC 5 cut(s) 107, 402, 965, 2255, 2310
BspCNI CTCAG 6 cut(s) 439, 735, 1473, 1531, 2233, 2527
BspDI ATCGAT 1 cut(s) 1380
BspEI TCCGGA 2 cut(s) 1618, 2446
BspHI TCATGA 2 cut(s) 712, 907
BspLI GGNNCC 7 cut(s) 107, 391, 565, 797, 1135, 2116, 2169
BspMI ACCTGC 1 cut(s) 228
BspOI GCTAGC 2 cut(s) 1082, 1155
BspPI GGATC 7 cut(s) 102, 701, 1128, 1141, 1182, 1686, 2106
BspT104I TTCGAA 1 cut(s) 810
BspT107I GGYRCC 1 cut(s) 2167
BspTNI GGTCTC 2 cut(s) 339, 1279
BsrDI GCAATG 5 cut(s) 23, 1146, 1813, 2415, 2529
BsrI ACTGG 5 cut(s) 302, 342, 1016, 2193, 2311
BssECI CCNNGG 3 cut(s) 1049, 1050, 1740
BssNI GRCGYC 2 cut(s) 1088, 1435
Bst2UI CCWGG 6 cut(s) 558, 782, 1051, 1742, 2312, 2607
Bst4CI ACNGT 4 cut(s) 71, 135, 1260, 1306
Bst6I CTCTTC 2 cut(s) 480, 2005
BstACI GRCGYC 2 cut(s) 1088, 1435
BstBI TTCGAA 1 cut(s) 810
BstC8I GCNNGC 4 cut(s) 267, 307, 1080, 1153
BstEII GGTNACC 1 cut(s) 1744
BstENI CCTNNNNNAGG 2 cut(s) 224, 1645
BstF5I GGATG 7 cut(s) 208, 288, 2047, 2065, 2086, 2236, 2602
BstHHI GCGC 2 cut(s) 271, 1788
BstMAI GTCTC 6 cut(s) 32, 339, 1279, 1640, 1914, 2201
BstMWI GCNNNNNNNGC 3 cut(s) 17, 408, 2425
BstNI CCWGG 6 cut(s) 558, 782, 1051, 1742, 2312, 2607
BstNSI RCATGY 3 cut(s) 2107, 2518, 2579
BstPAI GACNNNNGTC 1 cut(s) 1482
BstPI GGTNACC 1 cut(s) 1744
BstSCI CCNGG 7 cut(s) 107, 556, 780, 1049, 1740, 2310, 2605
BstSLI GKGCMC 1 cut(s) 109
BstV1I GCAGC 2 cut(s) 627, 1825
BstV2I GAAGAC 3 cut(s) 465, 1233, 1573
BstX2I RGATCY 8 cut(s) 94, 706, 1133, 1174, 1691, 1966, 1990, 2635
BstXI CCANNNNNNTGG 3 cut(s) 2278, 2624, 2652
BstYI RGATCY 8 cut(s) 94, 706, 1133, 1174, 1691, 1966, 1990, 2635
Bsu15I ATCGAT 1 cut(s) 1380
Bsu36I CCTNAGG 2 cut(s) 426, 1951
BsuRI GGCC 5 cut(s) 107, 402, 965, 2255, 2310
BsuTUI ATCGAT 1 cut(s) 1380
BtrI CACGTC 1 cut(s) 2561
BtsCI GGATG 7 cut(s) 208, 288, 2047, 2065, 2086, 2236, 2602
BtsIMutI CAGTG 5 cut(s) 140, 730, 1372, 1454, 2304
BveI ACCTGC 1 cut(s) 228
Cac8I GCNNGC 4 cut(s) 267, 307, 1080, 1153
CciI TCATGA 2 cut(s) 712, 907
CfoI GCGC 2 cut(s) 271, 1788
Cfr13I GGNCC 7 cut(s) 105, 106, 175, 389, 422, 554, 2254
ClaI ATCGAT 1 cut(s) 1380
CseI GACGC 3 cut(s) 1096, 1443, 2246
Csp6I GTAC 9 cut(s) 75, 217, 377, 980, 1207, 1503, 1598, 1651, 2168
CviAII CATG 8 cut(s) 464, 713, 908, 1121, 2104, 2278, 2515, 2576
CviQI GTAC 9 cut(s) 75, 217, 377, 980, 1207, 1503, 1598, 1651, 2168
DraI TTTAAA 3 cut(s) 2148, 2214, 2571
EaeI YGGCCR 1 cut(s) 2308
Eam1104I CTCTTC 2 cut(s) 480, 2005
EarI CTCTTC 2 cut(s) 480, 2005
Ecl136II GAGCTC 1 cut(s) 2284
Eco147I AGGCCT 1 cut(s) 965
Eco24I GRGCYC 2 cut(s) 109, 2286
Eco31I GGTCTC 2 cut(s) 339, 1279
Eco32I GATATC 2 cut(s) 721, 1456
Eco47I GGWCC 4 cut(s) 175, 389, 422, 554
Eco53kI GAGCTC 1 cut(s) 2284
Eco57I CTGAAG 1 cut(s) 209
Eco81I CCTNAGG 2 cut(s) 426, 1951
Eco88I CYCGRG 1 cut(s) 2437
Eco91I GGTNACC 1 cut(s) 1744
EcoICRI GAGCTC 1 cut(s) 2284
EcoNI CCTNNNNNAGG 2 cut(s) 224, 1645
EcoO109I RGGNCCY 3 cut(s) 105, 422, 554
EcoO65I GGTNACC 1 cut(s) 1744
EcoRI GAATTC 1 cut(s) 2525
EcoRII CCWGG 6 cut(s) 556, 780, 1049, 1740, 2310, 2605
EcoRV GATATC 2 cut(s) 721, 1456
EcoT22I ATGCAT 1 cut(s) 1122
EcoT38I GRGCYC 2 cut(s) 109, 2286
Esp3I CGTCTC 1 cut(s) 32
FaeI CATG 8 cut(s) 467, 716, 911, 1124, 2107, 2281, 2518, 2579
FalI AAGNNNNNCTT 4 cut(s) 950, 982, 2487, 2519
FaqI GGGAC 1 cut(s) 375
FatI CATG 8 cut(s) 463, 712, 907, 1120, 2103, 2277, 2514, 2575
FauI CCCGC 1 cut(s) 2127
FauNDI CATATG 1 cut(s) 1548
Fnu4HI GCNGC 5 cut(s) 21, 403, 616, 1839, 2156
FokI GGATG 7 cut(s) 215, 275, 2054, 2072, 2093, 2243, 2589
FriOI GRGCYC 2 cut(s) 109, 2286
Fsp4HI GCNGC 5 cut(s) 21, 403, 616, 1839, 2156
FspBI CTAG 8 cut(s) 162, 368, 1079, 1130, 1152, 1511, 1863, 2348
GlaI GCGC 2 cut(s) 270, 1787
GluI GCNGC 5 cut(s) 21, 403, 616, 1839, 2156
GsaI CCCAGC 1 cut(s) 924
GsuI CTGGAG 4 cut(s) 307, 397, 579, 1025
HaeIII GGCC 5 cut(s) 107, 402, 965, 2255, 2310
HapII CCGG 7 cut(s) 109, 567, 887, 1519, 1619, 2112, 2447
HgaI GACGC 3 cut(s) 1096, 1443, 2246
HhaI GCGC 2 cut(s) 271, 1788
Hin1I GRCGYC 2 cut(s) 1088, 1435
Hin1II CATG 8 cut(s) 467, 716, 911, 1124, 2107, 2281, 2518, 2579
Hin6I GCGC 2 cut(s) 269, 1786
HinP1I GCGC 2 cut(s) 269, 1786
HincII GTYRAC 2 cut(s) 1816, 2296
HindII GTYRAC 2 cut(s) 1816, 2296
HindIII AAGCTT 4 cut(s) 633, 804, 1703, 2186
HinfI GANTC 9 cut(s) 371, 812, 1389, 1483, 1492, 1622, 2179, 2583, 2628
HpaII CCGG 7 cut(s) 109, 567, 887, 1519, 1619, 2112, 2447
HphI GGTGA 5 cut(s) 1621, 1630, 1756, 2411, 2489
Hpy166II GTNNAC 8 cut(s) 595, 851, 1598, 1612, 1772, 1816, 1924, 2296
Hpy188I TCNGA 8 cut(s) 870, 1138, 1332, 1540, 1914, 2034, 2327, 2623
Hpy8I GTNNAC 8 cut(s) 595, 851, 1598, 1612, 1772, 1816, 1924, 2296
Hpy99I CGWCG 2 cut(s) 1437, 2562
HpyAV CCTTC 9 cut(s) 392, 740, 955, 1034, 1268, 1968, 2138, 2267, 2398
HpyCH4III ACNGT 4 cut(s) 71, 135, 1260, 1306
HpyCH4IV ACGT 3 cut(s) 276, 362, 2560
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 408, 2425
HpySE526I ACGT 3 cut(s) 276, 362, 2560
Hsp92I GRCGYC 2 cut(s) 1088, 1435
Hsp92II CATG 8 cut(s) 467, 716, 911, 1124, 2107, 2281, 2518, 2579
HspAI GCGC 2 cut(s) 269, 1786
Kpn2I TCCGGA 2 cut(s) 1618, 2446
KpnI GGTACC 1 cut(s) 2171
LmnI GCTCC 7 cut(s) 416, 569, 795, 889, 1835, 2120, 2281
Lsp1109I GCAGC 2 cut(s) 627, 1825
LweI GCATC 4 cut(s) 193, 1107, 2221, 2611
MaeI CTAG 8 cut(s) 162, 368, 1079, 1130, 1152, 1511, 1863, 2348
MaeII ACGT 3 cut(s) 276, 362, 2560
MaeIII GTNAC 7 cut(s) 358, 363, 725, 1027, 1744, 1896, 2457
MfeI CAATTG 1 cut(s) 540
MflI RGATCY 8 cut(s) 94, 706, 1133, 1174, 1691, 1966, 1990, 2635
MhlI GDGCHC 2 cut(s) 109, 2286
MlsI TGGCCA 1 cut(s) 2310
MluNI TGGCCA 1 cut(s) 2310
MlyI GAGTC 4 cut(s) 1398, 1486, 1492, 2592
MmeI TCCRAC 6 cut(s) 529, 1019, 1434, 1695, 2158, 2560
Mox20I TGGCCA 1 cut(s) 2310
Mph1103I ATGCAT 1 cut(s) 1122
MroI TCCGGA 2 cut(s) 1618, 2446
MroXI GAANNNNTTC 2 cut(s) 1683, 2502
MscI TGGCCA 1 cut(s) 2310
MslI CAYNNNNRTG 3 cut(s) 384, 1742, 2650
Msp20I TGGCCA 1 cut(s) 2310
MspI CCGG 7 cut(s) 109, 567, 887, 1519, 1619, 2112, 2447
MspR9I CCNGG 7 cut(s) 109, 558, 782, 1051, 1742, 2312, 2607
MunI CAATTG 1 cut(s) 540
Mva1269I GAATGC 1 cut(s) 238
MvaI CCWGG 6 cut(s) 558, 782, 1051, 1742, 2312, 2607
MwoI GCNNNNNNNGC 3 cut(s) 17, 408, 2425
NciI CCSGG 1 cut(s) 109
NdeI CATATG 1 cut(s) 1548
NheI GCTAGC 2 cut(s) 1078, 1151
NlaIII CATG 8 cut(s) 467, 716, 911, 1124, 2107, 2281, 2518, 2579
NlaIV GGNNCC 7 cut(s) 107, 391, 565, 797, 1135, 2116, 2169
NmeAIII GCCGAG 3 cut(s) 1116, 1268, 2578
NmuCI GTSAC 2 cut(s) 725, 1744
NsiI ATGCAT 1 cut(s) 1122
NspI RCATGY 3 cut(s) 2107, 2518, 2579
NspV TTCGAA 1 cut(s) 810
OliI CACNNNNGTG 1 cut(s) 1742
PaeR7I CTCGAG 1 cut(s) 2437
PagI TCATGA 2 cut(s) 712, 907
PasI CCCWGGG 1 cut(s) 1050
PceI AGGCCT 1 cut(s) 965
PcsI WCGNNNNNNNCGW 1 cut(s) 807
PctI GAATGC 1 cut(s) 238
PdmI GAANNNNTTC 2 cut(s) 1683, 2502
PfeI GAWTC 5 cut(s) 371, 812, 1622, 2179, 2628
Pfl23II CGTACG 1 cut(s) 74
PflMI CCANNNNNTGG 4 cut(s) 184, 511, 1795, 2317
PfoI TCCNGGA 3 cut(s) 556, 780, 2605
PkrI GCNGC 5 cut(s) 22, 404, 617, 1840, 2157
PleI GAGTC 4 cut(s) 1397, 1486, 1491, 2591
PpsI GAGTC 4 cut(s) 1397, 1486, 1491, 2591
PpuMI RGGWCCY 2 cut(s) 422, 554
PshAI GACNNNNGTC 1 cut(s) 1482
Psp124BI GAGCTC 1 cut(s) 2286
Psp1406I AACGTT 1 cut(s) 276
Psp5II RGGWCCY 2 cut(s) 422, 554
Psp6I CCWGG 6 cut(s) 556, 780, 1049, 1740, 2310, 2605
PspEI GGTNACC 1 cut(s) 1744
PspFI CCCAGC 1 cut(s) 920
PspGI CCWGG 6 cut(s) 556, 780, 1049, 1740, 2310, 2605
PspLI CGTACG 1 cut(s) 74
PspN4I GGNNCC 7 cut(s) 107, 391, 565, 797, 1135, 2116, 2169
PspOMI GGGCCC 1 cut(s) 105
PspPI GGNCC 7 cut(s) 105, 106, 175, 389, 422, 554, 2254
PspPPI RGGWCCY 2 cut(s) 422, 554
PsuI RGATCY 8 cut(s) 94, 706, 1133, 1174, 1691, 1966, 1990, 2635
RsaI GTAC 9 cut(s) 76, 218, 378, 981, 1208, 1504, 1599, 1652, 2169
RsaNI GTAC 9 cut(s) 75, 217, 377, 980, 1207, 1503, 1598, 1651, 2168
RseI CAYNNNNRTG 3 cut(s) 384, 1742, 2650
SacI GAGCTC 1 cut(s) 2286
SatI GCNGC 5 cut(s) 21, 403, 616, 1839, 2156
Sau96I GGNCC 7 cut(s) 105, 106, 175, 389, 422, 554, 2254
SchI GAGTC 4 cut(s) 1398, 1486, 1492, 2592
ScrFI CCNGG 7 cut(s) 109, 558, 782, 1051, 1742, 2312, 2607
SduI GDGCHC 2 cut(s) 109, 2286
SfaNI GCATC 4 cut(s) 193, 1107, 2221, 2611
Sfr274I CTCGAG 1 cut(s) 2437
SfuI TTCGAA 1 cut(s) 810
SinI GGWCC 4 cut(s) 175, 389, 422, 554
SlaI CTCGAG 1 cut(s) 2437
SmiMI CAYNNNNRTG 3 cut(s) 384, 1742, 2650
SmlI CTYRAG 3 cut(s) 1654, 2420, 2437
SmoI CTYRAG 3 cut(s) 1654, 2420, 2437
SpeI ACTAGT 2 cut(s) 1510, 2347
SseBI AGGCCT 1 cut(s) 965
SsiI CCGC 4 cut(s) 21, 403, 2120, 2155
SspI AATATT 2 cut(s) 196, 988
SspMI CTAG 8 cut(s) 162, 368, 1079, 1130, 1152, 1511, 1863, 2348
SstI GAGCTC 1 cut(s) 2286
StuI AGGCCT 1 cut(s) 965
StyD4I CCNGG 7 cut(s) 107, 556, 780, 1049, 1740, 2310, 2605
TaaI ACNGT 4 cut(s) 71, 135, 1260, 1306
TaiI ACGT 3 cut(s) 279, 365, 2563
TaqI TCGA 8 cut(s) 654, 810, 932, 1380, 1432, 2051, 2286, 2438
TatI WGTACW 2 cut(s) 376, 1206
TauI GCSGC 3 cut(s) 23, 405, 2158
TfiI GAWTC 5 cut(s) 371, 812, 1622, 2179, 2628
TscAI CASTG 5 cut(s) 140, 730, 1372, 1454, 2311
TseFI GTSAC 2 cut(s) 725, 1744
TseI GCWGC 2 cut(s) 615, 1838
Tsp45I GTSAC 2 cut(s) 725, 1744
TspGWI ACGGA 3 cut(s) 77, 854, 1308
TspRI CASTG 5 cut(s) 140, 730, 1372, 1454, 2311
Van91I CCANNNNNTGG 4 cut(s) 184, 511, 1795, 2317
VpaK11BI GGWCC 4 cut(s) 175, 389, 422, 554
XagI CCTNNNNNAGG 2 cut(s) 224, 1645
XapI RAATTY 9 cut(s) 352, 750, 1351, 1428, 1891, 1937, 2369, 2383, 2525
XceI RCATGY 3 cut(s) 2107, 2518, 2579
XcmI CCANNNNNNNNNTGG 1 cut(s) 2035
XhoI CTCGAG 1 cut(s) 2437
XmnI GAANNNNTTC 2 cut(s) 1683, 2502
XspI CTAG 8 cut(s) 162, 368, 1079, 1130, 1152, 1511, 1863, 2348
Zsp2I ATGCAT 1 cut(s) 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.