MD05G1231100.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
36468205 .. 36471517
3313 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1231100.v1.1.491

Sequence Viewer

Length: 2493 bp
ATGACAGACAATATTCAGTGCTTTCCCATGAAGTTTATGAAAAATCCGTCAAATGCTTTAGCTAAGATGTGCTTGCTTCTTTTCTACTCTTCTTTGCTGCTCATGGTCGCAGCCGTAATCTCCACAGCTGATGACGCCACGAGTACATTTCAGTCCATTAGAGACGGTGAGACTGTAGTTTCAACTGGCGGTACGTTTGAGCTAGGATTTTACTATCCTGATGCTTCTAATAGACGGTACGTGGCGATATGGTACAAACAGATATCTGTTACAACCATTGTGTGGGTTGCCAACAGAGACAAGCCCCTCGCTGATATGTCCGGCGTTTTGAAGGTCACCAACCCCGGAATTCTTGTCCTCAACCACAACATGAGCACAATTTGGTCCTCCAACACATCGAGAACTGCACAGAATCCAGTGGCACGTCTTTTGGATTCGGGTAATCTTGTCGTGATAGATAGGAGTGATGACGACTCTGAGAACTTTCTGTGGCAAGGTTTTGATTACCCTGGCGATACATTCTTACCAGGTATGAAGATTGGTAGGAACACAGTTACAGGCTTCAATTGGCATCTTAGATCGTGGAAAAGTCCTCAGGATCCTTCTCAAGGAAATCGTACATCTCAACTTGGTCCCAAGGGATATGCAGAATTATTTGTGAGGGAAGGTTCGGTCATTAAATATCGGTCTGGACCATGGAATGGAGTCGGGTTCAGTGGAAGCCCTCAGTTCAATCCAAACCCTATATTCACATACAGTTTTGTTTCTGAGCCTGATGAAATGTACTACAGTTACAAGCTTCACAACAACTCAATCTTTTCGAGGGTGGTGTTAACTTCAGATGGACTTGTGCAGCGCTACACATGGATTGATAGAACCAGAGGTTGGGTTCTTTACCAATCAGCCAAAATTGATGACTGTGTAAACTATGCATTGTGTGGTGTACATGGTGCATGTAACATTGAAGAGTCCCCGGTTTGTAGCTGTTTGAAAGGATTTACACCAAAGTTCCCGAAAGAATGGGATTTGGTGGATTGGTCTCATGGCTGTGTGAGAAAGACTTCTCTAAATTGCACCGGAGACATGTTCCAAAAGTACTCGGGGGTGAAATTGCCTAGCACAGAACAATCATGGCATAACAAAAGTATGAACCTCAAGGAATGTGAGATGGTGTGCATGAAGAACTGCTCCTGCACGGCTTATACAAATTTGGATATCCGGGATGGAGGAACTGGGTGCTTGCTGTGGTACGGTGATCTAATTGATATAAGATACACTGCTGAAAACGGGCAAGATATTTATATAAGAATGGCCGCAGCAGAACAAAATCATGAAGACGATACAAAGATCAACGCTAAATACTCTGAATCCAATGAAAAGAAAATGAGAATCATAATAAGCACTATTGTGTTGTCTATCGGATTGCTGATCCTGGGCCTTTCTCTGTTGTTTTATGTTTGGAAGAAGCAGCACCAAAAAGGTGGAAAACTGGGACGCAACCAAAATGAGGATCTGGAATTACCGTTATTTGACTTGATGACTATAGTTTCTGCAACCAATAACTTTTCAAATGAAAACAAACTTGGTGAAGGCGGTTTCGGATCTGTCTTTAAGGGTACGATGCAAGATGGACAAGAAATCGCAGTGAAAAGGCTTTCAAAAAATTCTAGACAAGGACTCAACGAGTTCAAGAATGAAGTTACACATATTGCCAAACTTCAGCACAGGAATCTAGTGAAGCTTCTTGGATGCTGCATTCAAGAAGATGAGATGATACTGATCTACAAGTTCATGCCTAACAAGAGCTTAGACTTCTTTATTTTTGATCAAACAAGAAGGATATTATTAGACTGGGCGAAGCGCTTTGAAATTATTAATGGGATAGCTCGAGGGCTCCTCTATCTTCATCAAGATTCTAGATTGAGAGTTATTCATAGAGATCTCAAAGCAAGTAACATTTTATTAGGCAGTGAATTTAACCCGAAATCTCAGACTTTGGCCTGGCTAGAAGCTTTGGAGGAATTGAAACGAAGAAAGTGCGGTTACATGTCCCCAGAATATGCAATTGATGGTTTTTACTCTATAAAGTCCGACGTCTATAGTTTTGGTGTTCTGGTGCTAGAGATAGTGAGTGGGAGTAGAAATAGAGGATTCTCTCATCCAGACCACAAACTCAACCTTCTTGGACATGCATGGATGCTACACACAGAAGGCAGGCCTCTCGAACTGCTTGATGCATCGATAGAGGACTCCATCACTCTGCATGAAGTTGTGAGAACGATTCATGTGGGTCTTTTGTGTGTGCAGAGGAATCCAGAAGACAGGCCGAGCATGTCAGCCGCAATTCTAATGTTGGGTAGTGAAGGTGCATTGCCCCCACCTCTAAAACCTGGTTTTTACAGTGAAAGGGATATGAGTGAACTCGAAGCCGGTCATTCTTCTAAAACATGCTCAGCTAATGAAGTCACTATTTCACTAGTCGAGGCTCGATAA

Protein Analysis

831

Amino Acids

93.6

Weight (kDa)

6.84

Isoelectric Point (pI)

45.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 92 - 196 2e-37 D-mannose binding lectin
S_locus_glycop PF00954 228 - 337 1.3e-30 S-locus glycoprotein domain
PAN_2 PF08276 358 - 423 3.3e-20 PAN-like domain
Pkinase PF00069 523 - 780 8.3e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 525 - 780 2e-36 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 788 - 830 1.8e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27290 AT4G27290
fragaria_vesca FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g21310 FvH4_3g21310
malus_domestica MD05G1219900.v1.1 MD05G1220200.v1.1 MD05G1230800.v1.1 MD05G1231100.v1.1 MD05G1231700.v1.1 MD05G1232100.v1.1 MD05G1232400.v1.1 MD05G1233000.v1.1 MD10G1202800.v1.1
prunus_persica Prupe.4G139500_v2.0.a1 Prupe.4G139500_v2.0.a1
pyrus_communis pycom05g20170 pycom05g20200 pycom05g20230 pycom05g20250 pycom05g20260 pycom05g20280 pycom05g20320 pycom05g20370 pycom05g20380 pycom05g24850 pycom10g17340
rosa_chinensis RchiOBHm_Chr5g0026351 RchiOBHm_Chr5g0026371 RchiOBHm_Chr5g0026381 RchiOBHm_Chr5g0026411 RchiOBHm_Chr5g0026551 RchiOBHm_Chr5g0036371
rosa_laevigata RLG00000032923 RLG00000032926 RLG00000032927 RLG00000032928 RLG00000032934 RLG00000033692
rosa_multiflora Rmu_co8389779.1_g000001 Rmu_sc0000712.1_g000012 Rmu_sc0001017.1_g000026 Rmu_sc0001114.1_g000001 Rmu_sc0001114.1_g000002 Rmu_sc0001114.1_g000008 Rmu_sc0005581.1_g000006 Rmu_sc0005581.1_g000007 Rmu_sc0006059.1_g000052 Rmu_sc0042966.1_g000001
rosa_roxburghii Rroxscaffold_1G00044440 Rroxscaffold_1G00052930 Rroxscaffold_1G00052980 Rroxscaffold_1G00052990 Rroxscaffold_1G00053000
rosa_rugosa Rorug05G0092500 Rorug05G0092500 Rorug05G0092500 Rorug05G0092600 Rorug05G0092700 Rorug05G0092700 Rorug05G0093700 Rorug05G0155200 Rorug05G0155800 Rorug05G0155800
rosa_samantha Rh5AG185700 Rh5AG186300 Rh5BG182600 Rh5BG182900 Rh5BG183600 Rh5BG249400 Rh5CG202000 Rh5CG202100 Rh5CG202200 Rh5CG203400 Rh5CG281200 Rh5DG184400 Rh5DG184500 Rh5DG185900
rosa_wichuraiana Rw5G016850 Rw5G016870 Rw5G016930 Rw5G022870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2097
AccB7I CCANNNNNTGG 3 cut(s) 282, 701, 885
AciI CCGC 5 cut(s) 189, 1314, 1593, 2040, 2340
AclWI GGATC 5 cut(s) 593, 606, 1423, 1518, 1609
AcoI YGGCCR 1 cut(s) 1311
AcsI RAATTY 4 cut(s) 348, 1207, 1663, 1973
AcuI CTGAAG 2 cut(s) 822, 1703
AcyI GRCGYC 2 cut(s) 135, 2094
AfeI AGCGCT 2 cut(s) 857, 1862
AfiI CCNNNNNNNGG 5 cut(s) 282, 608, 701, 885, 1507
AflIII ACRYGT 2 cut(s) 1083, 2046
AhlI ACTAGT 1 cut(s) 2476
AjiI CACGTC 1 cut(s) 425
AjnI CCWGG 5 cut(s) 508, 526, 1431, 2000, 2389
AjuI GAANNNNNNNTTGG 4 cut(s) 868, 900, 1566, 1598
AleI CACNNNNGTG 1 cut(s) 1406
Alw21I GWGCWC 1 cut(s) 377
Alw26I GTCTC 5 cut(s) 156, 164, 291, 1044, 1074
AlwI GGATC 5 cut(s) 593, 606, 1423, 1518, 1609
Ama87I CYCGRG 2 cut(s) 1099, 1887
Aor51HI AGCGCT 2 cut(s) 857, 1862
AoxI GGCC 5 cut(s) 1311, 1435, 1998, 2216, 2324
ApeKI GCWGC 6 cut(s) 97, 110, 853, 1316, 1468, 1752
ApoI RAATTY 4 cut(s) 348, 1207, 1663, 1973
AseI ATTAAT 1 cut(s) 1875
Asp700I GAANNNNTTC 1 cut(s) 1060
AspLEI GCGC 2 cut(s) 858, 1863
AspS9I GGNCC 4 cut(s) 384, 632, 692, 1435
AsuC2I CCSGG 3 cut(s) 345, 974, 1220
AsuHPI GGTGA 5 cut(s) 179, 328, 1117, 1265, 1598
AvaI CYCGRG 2 cut(s) 1099, 1887
AvaII GGWCC 3 cut(s) 384, 632, 692
AxyI CCTNAGG 1 cut(s) 594
BamHI GGATCC 1 cut(s) 598
BanII GRGCYC 1 cut(s) 1896
BauI CACGAG 1 cut(s) 139
BbsI GAAGAC 2 cut(s) 1341, 2325
Bbv12I GWGCWC 1 cut(s) 377
BbvI GCAGC 6 cut(s) 84, 122, 865, 1328, 1480, 1739
BccI CCATC 6 cut(s) 836, 1162, 1217, 1622, 2063, 2261
BceAI ACGGC 2 cut(s) 98, 1212
BcgI CGANNNNNNTGC 4 cut(s) 2019, 2053, 2203, 2237
BciT130I CCWGG 5 cut(s) 510, 528, 1433, 2002, 2391
BclI TGATCA 1 cut(s) 1825
BcnI CCSGG 3 cut(s) 345, 974, 1220
BcoDI GTCTC 5 cut(s) 156, 164, 291, 1044, 1074
BcuI ACTAGT 1 cut(s) 2476
BfaI CTAG 8 cut(s) 203, 1116, 1668, 1733, 1917, 2006, 2120, 2477
BfmI CTRYAG 4 cut(s) 174, 787, 1542, 2098
BfoI RGCGCY 2 cut(s) 859, 1864
BglII AGATCT 1 cut(s) 1939
BisI GCNGC 8 cut(s) 98, 111, 854, 1314, 1317, 1469, 1753, 2340
BlpI GCTNAGC 1 cut(s) 2452
BlsI GCNGC 8 cut(s) 99, 112, 855, 1315, 1318, 1470, 1754, 2341
BmcAI AGTACT 1 cut(s) 1097
Bme1390I CCNGG 8 cut(s) 345, 510, 528, 974, 1220, 1433, 2002, 2391
Bme18I GGWCC 3 cut(s) 384, 632, 692
BmeT110I CYCGRG 2 cut(s) 1099, 1887
BmgBI CACGTC 1 cut(s) 425
BmgT120I GGNCC 4 cut(s) 384, 632, 692, 1435
BmiI GGNNCC 3 cut(s) 600, 634, 1895
BmrFI CCNGG 8 cut(s) 345, 510, 528, 974, 1220, 1433, 2002, 2391
BmrI ACTGGG 3 cut(s) 1242, 1499, 1861
BmsI GCATC 7 cut(s) 211, 580, 1611, 1739, 2187, 2224, 2246
BmuI ACTGGG 3 cut(s) 1242, 1499, 1861
BpiI GAAGAC 2 cut(s) 1341, 2325
BplI GAGNNNNNCTC 2 cut(s) 1881, 1913
Bpu1102I GCTNAGC 1 cut(s) 2452
BpuEI CTTGAG 2 cut(s) 591, 1139
BpuMI CCSGG 3 cut(s) 345, 974, 1220
Bsa29I ATCGAT 1 cut(s) 2240
BsaAI YACGTR 1 cut(s) 241
BsaBI GATNNNNATC 1 cut(s) 1778
BsaHI GRCGYC 2 cut(s) 135, 2094
BsaI GGTCTC 1 cut(s) 1044
BsaJI CCNNGG 6 cut(s) 343, 508, 636, 695, 972, 1432
BsaWI WCCGGW 1 cut(s) 1076
Bsc4I CCNNNNNNNGG 5 cut(s) 282, 608, 701, 885, 1507
Bse118I RCCGGY 1 cut(s) 2429
Bse1I ACTGG 5 cut(s) 190, 416, 1237, 1494, 1856
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 2369
Bse8I GATNNNNATC 1 cut(s) 1778
BseBI CCWGG 5 cut(s) 510, 528, 1433, 2002, 2391
BseCI ATCGAT 1 cut(s) 2240
BseDI CCNNGG 6 cut(s) 343, 508, 636, 695, 972, 1432
BseGI GGATG 4 cut(s) 1228, 1754, 2158, 2202
BseJI GATNNNNATC 1 cut(s) 1778
BseLI CCNNNNNNNGG 5 cut(s) 282, 608, 701, 885, 1507
BseMI GCAATG 1 cut(s) 2369
BseMII CTCAG 6 cut(s) 468, 608, 740, 759, 2003, 2466
BseNI ACTGG 5 cut(s) 190, 416, 1237, 1494, 1856
BseRI GAGGAG 1 cut(s) 1886
BseXI GCAGC 6 cut(s) 84, 122, 865, 1328, 1480, 1739
BsgI GTGCAG 4 cut(s) 390, 872, 1177, 2324
BshFI GGCC 5 cut(s) 1313, 1437, 2000, 2218, 2326
BshVI ATCGAT 1 cut(s) 2240
BsiHKAI GWGCWC 1 cut(s) 377
BsiHKCI CYCGRG 2 cut(s) 1099, 1887
BsiSI CCGG 6 cut(s) 321, 345, 974, 1077, 1219, 2430
BslFI GGGAC 4 cut(s) 618, 955, 1506, 2035
BslI CCNNNNNNNGG 5 cut(s) 282, 608, 701, 885, 1507
BsmAI GTCTC 5 cut(s) 156, 164, 291, 1044, 1074
BsmBI CGTCTC 1 cut(s) 156
BsmFI GGGAC 4 cut(s) 618, 955, 1506, 2035
BsmI GAATGC 1 cut(s) 1755
BsnI GGCC 5 cut(s) 1313, 1437, 2000, 2218, 2326
Bso31I GGTCTC 1 cut(s) 1044
BsoBI CYCGRG 2 cut(s) 1099, 1887
Bsp1286I GDGCHC 2 cut(s) 377, 1896
Bsp1407I TGTACA 1 cut(s) 943
Bsp1720I GCTNAGC 1 cut(s) 2452
Bsp19I CCATGG 1 cut(s) 695
BspACI CCGC 5 cut(s) 189, 1314, 1593, 2040, 2340
BspANI GGCC 5 cut(s) 1313, 1437, 2000, 2218, 2326
BspCNI CTCAG 6 cut(s) 469, 607, 739, 760, 2002, 2465
BspDI ATCGAT 1 cut(s) 2240
BspHI TCATGA 1 cut(s) 1330
BspLI GGNNCC 3 cut(s) 600, 634, 1895
BspPI GGATC 5 cut(s) 593, 606, 1423, 1518, 1609
BspTNI GGTCTC 1 cut(s) 1044
BsrDI GCAATG 1 cut(s) 2369
BsrFI RCCGGY 1 cut(s) 2429
BsrGI TGTACA 1 cut(s) 943
BsrI ACTGG 5 cut(s) 190, 416, 1237, 1494, 1856
BssAI RCCGGY 1 cut(s) 2429
BssECI CCNNGG 6 cut(s) 343, 508, 636, 695, 972, 1432
BssNI GRCGYC 2 cut(s) 135, 2094
BssSI CACGAG 1 cut(s) 139
BssT1I CCWWGG 2 cut(s) 636, 695
Bst2BI CACGAG 1 cut(s) 139
Bst2UI CCWGG 5 cut(s) 510, 528, 1433, 2002, 2391
Bst6I CTCTTC 2 cut(s) 94, 960
BstACI GRCGYC 2 cut(s) 135, 2094
BstAUI TGTACA 1 cut(s) 943
BstBAI YACGTR 1 cut(s) 241
BstC8I GCNNGC 3 cut(s) 74, 1241, 2216
BstDEI CTNAG 9 cut(s) 63, 477, 575, 594, 726, 768, 1807, 1989, 2452
BstDSI CCRYGG 1 cut(s) 695
BstEII GGTNACC 1 cut(s) 334
BstENI CCTNNNNNAGG 1 cut(s) 606
BstF5I GGATG 4 cut(s) 1228, 1754, 2158, 2202
BstH2I RGCGCY 2 cut(s) 859, 1864
BstHHI GCGC 2 cut(s) 858, 1863
BstMAI GTCTC 5 cut(s) 156, 164, 291, 1044, 1074
BstMWI GCNNNNNNNGC 1 cut(s) 134
BstNI CCWGG 5 cut(s) 510, 528, 1433, 2002, 2391
BstNSI RCATGY 6 cut(s) 957, 1087, 2050, 2192, 2335, 2451
BstPI GGTNACC 1 cut(s) 334
BstSCI CCNGG 8 cut(s) 343, 508, 526, 972, 1218, 1431, 2000, 2389
BstSFI CTRYAG 4 cut(s) 174, 787, 1542, 2098
BstV1I GCAGC 6 cut(s) 84, 122, 865, 1328, 1480, 1739
BstV2I GAAGAC 2 cut(s) 1341, 2325
BstX2I RGATCY 4 cut(s) 598, 1510, 1601, 1939
BstXI CCANNNNNNTGG 1 cut(s) 1481
BstYI RGATCY 4 cut(s) 598, 1510, 1601, 1939
Bsu15I ATCGAT 1 cut(s) 2240
Bsu36I CCTNAGG 1 cut(s) 594
BsuRI GGCC 5 cut(s) 1313, 1437, 2000, 2218, 2326
BsuTUI ATCGAT 1 cut(s) 2240
BtgI CCRYGG 1 cut(s) 695
BtrI CACGTC 1 cut(s) 425
BtsCI GGATG 4 cut(s) 1228, 1754, 2158, 2202
BtsI GCAGTG 3 cut(s) 1275, 1650, 1975
BtsIMutI CAGTG 7 cut(s) 23, 423, 721, 1275, 1650, 1975, 2407
Cac8I GCNNGC 3 cut(s) 74, 1241, 2216
CciI TCATGA 1 cut(s) 1330
CfoI GCGC 2 cut(s) 858, 1863
Cfr10I RCCGGY 1 cut(s) 2429
Cfr13I GGNCC 4 cut(s) 384, 632, 692, 1435
ClaI ATCGAT 1 cut(s) 2240
CseI GACGC 2 cut(s) 143, 1503
CsiI ACCWGGT 2 cut(s) 526, 2389
DdeI CTNAG 9 cut(s) 63, 477, 575, 594, 726, 768, 1807, 1989, 2452
EaeI YGGCCR 1 cut(s) 1311
Eam1104I CTCTTC 2 cut(s) 94, 960
EarI CTCTTC 2 cut(s) 94, 960
Eco130I CCWWGG 2 cut(s) 636, 695
Eco147I AGGCCT 1 cut(s) 2218
Eco24I GRGCYC 1 cut(s) 1896
Eco31I GGTCTC 1 cut(s) 1044
Eco32I GATATC 2 cut(s) 264, 1216
Eco47I GGWCC 3 cut(s) 384, 632, 692
Eco47III AGCGCT 2 cut(s) 857, 1862
Eco57I CTGAAG 2 cut(s) 822, 1703
Eco81I CCTNAGG 1 cut(s) 594
Eco88I CYCGRG 2 cut(s) 1099, 1887
Eco91I GGTNACC 1 cut(s) 334
EcoNI CCTNNNNNAGG 1 cut(s) 606
EcoO65I GGTNACC 1 cut(s) 334
EcoRI GAATTC 1 cut(s) 348
EcoRII CCWGG 5 cut(s) 508, 526, 1431, 2000, 2389
EcoRV GATATC 2 cut(s) 264, 1216
EcoT14I CCWWGG 2 cut(s) 636, 695
EcoT22I ATGCAT 3 cut(s) 934, 2194, 2239
EcoT38I GRGCYC 1 cut(s) 1896
ErhI CCWWGG 2 cut(s) 636, 695
Esp3I CGTCTC 1 cut(s) 156
FalI AAGNNNNNCTT 2 cut(s) 56, 88
FaqI GGGAC 4 cut(s) 618, 955, 1506, 2035
FbaI TGATCA 1 cut(s) 1825
Fnu4HI GCNGC 8 cut(s) 98, 111, 854, 1314, 1317, 1469, 1753, 2340
FokI GGATG 4 cut(s) 1235, 1761, 2145, 2209
FriOI GRGCYC 1 cut(s) 1896
Fsp4HI GCNGC 8 cut(s) 98, 111, 854, 1314, 1317, 1469, 1753, 2340
FspBI CTAG 8 cut(s) 203, 1116, 1668, 1733, 1917, 2006, 2120, 2477
GlaI GCGC 2 cut(s) 857, 1862
GluI GCNGC 8 cut(s) 98, 111, 854, 1314, 1317, 1469, 1753, 2340
HaeII RGCGCY 2 cut(s) 859, 1864
HaeIII GGCC 5 cut(s) 1313, 1437, 2000, 2218, 2326
HapII CCGG 6 cut(s) 321, 345, 974, 1077, 1219, 2430
HgaI GACGC 2 cut(s) 143, 1503
HhaI GCGC 2 cut(s) 858, 1863
Hin1I GRCGYC 2 cut(s) 135, 2094
Hin6I GCGC 2 cut(s) 856, 1861
HinP1I GCGC 2 cut(s) 856, 1861
HincII GTYRAC 1 cut(s) 834
HindII GTYRAC 1 cut(s) 834
HindIII AAGCTT 3 cut(s) 797, 1739, 2010
HpaI GTTAAC 1 cut(s) 834
HpaII CCGG 6 cut(s) 321, 345, 974, 1077, 1219, 2430
HphI GGTGA 5 cut(s) 179, 328, 1117, 1265, 1598
Hpy166II GTNNAC 4 cut(s) 834, 925, 944, 2420
Hpy188I TCNGA 8 cut(s) 478, 769, 841, 1366, 1421, 1601, 1992, 2092
Hpy8I GTNNAC 4 cut(s) 834, 925, 944, 2420
Hpy99I CGWCG 1 cut(s) 2096
HpyAV CCTTC 8 cut(s) 325, 612, 659, 1583, 1830, 2189, 2204, 2357
HpyCH4IV ACGT 4 cut(s) 194, 240, 424, 2094
HpyF10VI GCNNNNNNNGC 1 cut(s) 134
HpyF3I CTNAG 9 cut(s) 63, 477, 575, 594, 726, 768, 1807, 1989, 2452
HpySE526I ACGT 4 cut(s) 194, 240, 424, 2094
Hsp92I GRCGYC 2 cut(s) 135, 2094
HspAI GCGC 2 cut(s) 856, 1861
Ksp22I TGATCA 1 cut(s) 1825
KspAI GTTAAC 1 cut(s) 834
LmnI GCTCC 2 cut(s) 1193, 1899
Lsp1109I GCAGC 6 cut(s) 84, 122, 865, 1328, 1480, 1739
LweI GCATC 7 cut(s) 211, 580, 1611, 1739, 2187, 2224, 2246
MabI ACCWGGT 2 cut(s) 526, 2389
MaeI CTAG 8 cut(s) 203, 1116, 1668, 1733, 1917, 2006, 2120, 2477
MaeII ACGT 4 cut(s) 194, 240, 424, 2094
MaeIII GTNAC 9 cut(s) 268, 334, 553, 791, 956, 1699, 1952, 2042, 2464
MfeI CAATTG 2 cut(s) 565, 2064
MflI RGATCY 4 cut(s) 598, 1510, 1601, 1939
MhlI GDGCHC 2 cut(s) 377, 1896
MlyI GAGTC 5 cut(s) 467, 714, 977, 1671, 2243
MmeI TCCRAC 2 cut(s) 414, 2115
Mph1103I ATGCAT 3 cut(s) 934, 2194, 2239
MroXI GAANNNNTTC 1 cut(s) 1060
MseI TTAA 5 cut(s) 678, 833, 1611, 1875, 1977
MslI CAYNNNNRTG 2 cut(s) 1047, 1406
MspA1I CMGCKG 1 cut(s) 128
MspI CCGG 6 cut(s) 321, 345, 974, 1077, 1219, 2430
MspR9I CCNGG 8 cut(s) 345, 510, 528, 974, 1220, 1433, 2002, 2391
MunI CAATTG 2 cut(s) 565, 2064
Mva1269I GAATGC 1 cut(s) 1755
MvaI CCWGG 5 cut(s) 510, 528, 1433, 2002, 2391
MwoI GCNNNNNNNGC 1 cut(s) 134
NciI CCSGG 3 cut(s) 345, 974, 1220
NcoI CCATGG 1 cut(s) 695
NlaIV GGNNCC 3 cut(s) 600, 634, 1895
NmeAIII GCCGAG 1 cut(s) 2352
NmuCI GTSAC 2 cut(s) 334, 2464
NsiI ATGCAT 3 cut(s) 934, 2194, 2239
NspI RCATGY 6 cut(s) 957, 1087, 2050, 2192, 2335, 2451
OliI CACNNNNGTG 1 cut(s) 1406
PaeR7I CTCGAG 1 cut(s) 1887
PagI TCATGA 1 cut(s) 1330
PceI AGGCCT 1 cut(s) 2218
PciI ACATGT 2 cut(s) 1083, 2046
PctI GAATGC 1 cut(s) 1755
PdmI GAANNNNTTC 1 cut(s) 1060
PfeI GAWTC 9 cut(s) 412, 434, 1367, 1389, 1729, 1913, 2151, 2281, 2311
PflMI CCANNNNNTGG 3 cut(s) 282, 701, 885
PfoI TCCNGGA 1 cut(s) 1218
PkrI GCNGC 8 cut(s) 99, 112, 855, 1315, 1318, 1470, 1754, 2341
PleI GAGTC 5 cut(s) 467, 713, 976, 1671, 2243
PpsI GAGTC 5 cut(s) 467, 713, 976, 1671, 2243
Ppu21I YACGTR 1 cut(s) 241
PscI ACATGT 2 cut(s) 1083, 2046
PshBI ATTAAT 1 cut(s) 1875
Psp6I CCWGG 5 cut(s) 508, 526, 1431, 2000, 2389
PspEI GGTNACC 1 cut(s) 334
PspGI CCWGG 5 cut(s) 508, 526, 1431, 2000, 2389
PspN4I GGNNCC 3 cut(s) 600, 634, 1895
PspPI GGNCC 4 cut(s) 384, 632, 692, 1435
PspXI VCTCGAGB 1 cut(s) 1887
PsuI RGATCY 4 cut(s) 598, 1510, 1601, 1939
PvuII CAGCTG 1 cut(s) 128
RseI CAYNNNNRTG 2 cut(s) 1047, 1406
SaqAI TTAA 5 cut(s) 678, 833, 1611, 1875, 1977
SatI GCNGC 8 cut(s) 98, 111, 854, 1314, 1317, 1469, 1753, 2340
Sau96I GGNCC 4 cut(s) 384, 632, 692, 1435
ScaI AGTACT 1 cut(s) 1097
SchI GAGTC 5 cut(s) 467, 714, 977, 1671, 2243
ScrFI CCNGG 8 cut(s) 345, 510, 528, 974, 1220, 1433, 2002, 2391
SduI GDGCHC 2 cut(s) 377, 1896
SexAI ACCWGGT 2 cut(s) 526, 2389
SfaNI GCATC 7 cut(s) 211, 580, 1611, 1739, 2187, 2224, 2246
SfcI CTRYAG 4 cut(s) 174, 787, 1542, 2098
Sfr274I CTCGAG 1 cut(s) 1887
SinI GGWCC 3 cut(s) 384, 632, 692
SlaI CTCGAG 1 cut(s) 1887
SmiMI CAYNNNNRTG 2 cut(s) 1047, 1406
SmlI CTYRAG 3 cut(s) 606, 1154, 1887
SmoI CTYRAG 3 cut(s) 606, 1154, 1887
SpeI ACTAGT 1 cut(s) 2476
SseBI AGGCCT 1 cut(s) 2218
SsiI CCGC 5 cut(s) 189, 1314, 1593, 2040, 2340
SspI AATATT 1 cut(s) 13
SspMI CTAG 8 cut(s) 203, 1116, 1668, 1733, 1917, 2006, 2120, 2477
StuI AGGCCT 1 cut(s) 2218
StyD4I CCNGG 8 cut(s) 343, 508, 526, 972, 1218, 1431, 2000, 2389
StyI CCWWGG 2 cut(s) 636, 695
TaiI ACGT 4 cut(s) 197, 243, 427, 2097
TaqI TCGA 8 cut(s) 398, 821, 1888, 2223, 2240, 2424, 2481, 2488
TaqII GACCGA 2 cut(s) 661, 675
TatI WGTACW 4 cut(s) 143, 783, 943, 1095
TauI GCSGC 2 cut(s) 1316, 2342
TfiI GAWTC 9 cut(s) 412, 434, 1367, 1389, 1729, 1913, 2151, 2281, 2311
Tru1I TTAA 5 cut(s) 678, 833, 1611, 1875, 1977
Tru9I TTAA 5 cut(s) 678, 833, 1611, 1875, 1977
TscAI CASTG 7 cut(s) 23, 423, 721, 1282, 1650, 1975, 2407
TseFI GTSAC 2 cut(s) 334, 2464
TseI GCWGC 6 cut(s) 97, 110, 853, 1316, 1468, 1752
Tsp45I GTSAC 2 cut(s) 334, 2464
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 7 cut(s) 23, 423, 721, 1282, 1650, 1975, 2407
Van91I CCANNNNNTGG 3 cut(s) 282, 701, 885
VpaK11BI GGWCC 3 cut(s) 384, 632, 692
VspI ATTAAT 1 cut(s) 1875
XagI CCTNNNNNAGG 1 cut(s) 606
XapI RAATTY 4 cut(s) 348, 1207, 1663, 1973
XbaI TCTAGA 2 cut(s) 1667, 1916
XceI RCATGY 6 cut(s) 957, 1087, 2050, 2192, 2335, 2451
XhoI CTCGAG 1 cut(s) 1887
XmnI GAANNNNTTC 1 cut(s) 1060
XspI CTAG 8 cut(s) 203, 1116, 1668, 1733, 1917, 2006, 2120, 2477
ZraI GACGTC 1 cut(s) 2095
ZrmI AGTACT 1 cut(s) 1097
Zsp2I ATGCAT 3 cut(s) 934, 2194, 2239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.