Rorug05G0155200

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
14487857 .. 14490603
2747 bp
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UTR
Exon/CDS
Intron
Rorug05G0155200.1

Sequence Viewer

Length: 576 bp
ATGAAGGACTGGGGCATAGATGGACAGGGAGATATGAAGTTCATTTATGGGACAAAGGGTCTTGGCATCCAACATAAAGGAATAAGGGAAAGCAAGTTTATCTGGGTAACCACTGCAAGTGGCCTAGTGGTTCTTGCCCAGTTGGGTGTGCTCCCCAACCTAGGTTCGAACCCCGAAGCTGTCAAAGTGGCGAGGCACTGTGCTGCAATGCACAGTTGGAGCATTTCACATGCGCCGAAGGGGTTTATCTTGGGCCTAGGAAGCCTTTGGGTTCCCCTTGACAAAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTATCTGGGAGCTCATGGTGAAGAAGAATCCATAGCAAGAGCATATGATTTGGCAGCACTCAAGTACTGGGGAGCATCAACTTCTAAAAAATTTCCGATGTCTGAATACTTAACATTAAAAGAATACTTGGCCTCTCTAAGAAGAAGAAGCAGTGACTTCTCAAATGGTGTATACAAGGGCAATGGTGATTACAACCCCTTCATCAAATATGACTATTTTGATATTGTCACGTGCCACATTATCCAGTTGTAA

Protein Analysis

191

Amino Acids

21.39

Weight (kDa)

9.73

Isoelectric Point (pI)

32.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27290 AT4G27290
fragaria_vesca FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g21310 FvH4_3g21310
malus_domestica MD05G1219900.v1.1 MD05G1220200.v1.1 MD05G1230800.v1.1 MD05G1231100.v1.1 MD05G1231700.v1.1 MD05G1232100.v1.1 MD05G1232400.v1.1 MD05G1233000.v1.1 MD10G1202800.v1.1
prunus_persica Prupe.4G139500_v2.0.a1 Prupe.4G139500_v2.0.a1
pyrus_communis pycom05g20170 pycom05g20200 pycom05g20230 pycom05g20250 pycom05g20260 pycom05g20280 pycom05g20320 pycom05g20370 pycom05g20380 pycom05g24850 pycom10g17340
rosa_chinensis RchiOBHm_Chr5g0026351 RchiOBHm_Chr5g0026371 RchiOBHm_Chr5g0026381 RchiOBHm_Chr5g0026411 RchiOBHm_Chr5g0026551 RchiOBHm_Chr5g0036371
rosa_laevigata RLG00000032923 RLG00000032926 RLG00000032927 RLG00000032928 RLG00000032934 RLG00000033692
rosa_multiflora Rmu_co8389779.1_g000001 Rmu_sc0000712.1_g000012 Rmu_sc0001017.1_g000026 Rmu_sc0001114.1_g000001 Rmu_sc0001114.1_g000002 Rmu_sc0001114.1_g000008 Rmu_sc0005581.1_g000006 Rmu_sc0005581.1_g000007 Rmu_sc0006059.1_g000052 Rmu_sc0042966.1_g000001
rosa_roxburghii Rroxscaffold_1G00044440 Rroxscaffold_1G00052930 Rroxscaffold_1G00052980 Rroxscaffold_1G00052990 Rroxscaffold_1G00053000
rosa_rugosa Rorug05G0092500 Rorug05G0092500 Rorug05G0092500 Rorug05G0092600 Rorug05G0092700 Rorug05G0092700 Rorug05G0093700 Rorug05G0155200 Rorug05G0155800 Rorug05G0155800
rosa_samantha Rh5AG185700 Rh5AG186300 Rh5BG182600 Rh5BG182900 Rh5BG183600 Rh5BG249400 Rh5CG202000 Rh5CG202100 Rh5CG202200 Rh5CG203400 Rh5CG281200 Rh5DG184400 Rh5DG184500 Rh5DG185900
rosa_wichuraiana Rw5G016850 Rw5G016870 Rw5G016930 Rw5G022870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 495
AcsI RAATTY 1 cut(s) 413
AcvI CACGTG 1 cut(s) 555
AfaI GTAC 1 cut(s) 389
AfiI CCNNNNNNNGG 1 cut(s) 161
AhdI GACNNNNNGTC 1 cut(s) 57
AluBI AGCT 2 cut(s) 179, 335
AluI AGCT 2 cut(s) 179, 335
Alw21I GWGCWC 2 cut(s) 153, 337
AoxI GGCC 3 cut(s) 121, 253, 453
ApeKI GCWGC 2 cut(s) 203, 377
ApoI RAATTY 1 cut(s) 413
AspA2I CCTAGG 2 cut(s) 160, 256
AspLEI GCGC 1 cut(s) 235
AspS9I GGNCC 1 cut(s) 253
AsuHPI GGTGA 2 cut(s) 353, 521
AsuII TTCGAA 1 cut(s) 167
AvrII CCTAGG 2 cut(s) 160, 256
BanII GRGCYC 1 cut(s) 337
BbrPI CACGTG 1 cut(s) 555
Bbv12I GWGCWC 2 cut(s) 153, 337
BbvI GCAGC 2 cut(s) 190, 389
BccI CCATC 1 cut(s) 14
BfaI CTAG 3 cut(s) 125, 161, 257
BisI GCNGC 2 cut(s) 204, 378
BlnI CCTAGG 2 cut(s) 160, 256
BlsI GCNGC 2 cut(s) 205, 379
BmcAI AGTACT 1 cut(s) 389
BmeRI GACNNNNNGTC 1 cut(s) 57
BmgT120I GGNCC 1 cut(s) 253
BmiI GGNNCC 1 cut(s) 273
BmrI ACTGGG 3 cut(s) 19, 133, 400
BmsI GCATC 2 cut(s) 75, 407
BmuI ACTGGG 3 cut(s) 19, 133, 400
Bpu14I TTCGAA 1 cut(s) 167
BpuEI CTTGAG 1 cut(s) 368
BsaAI YACGTR 1 cut(s) 555
BsaJI CCNNGG 2 cut(s) 160, 256
Bsc4I CCNNNNNNNGG 1 cut(s) 161
Bse1I ACTGG 4 cut(s) 14, 139, 395, 568
Bse3DI GCAATG 2 cut(s) 213, 511
BseDI CCNNGG 2 cut(s) 160, 256
BseGI GGATG 1 cut(s) 66
BseLI CCNNNNNNNGG 1 cut(s) 161
BseMI GCAATG 2 cut(s) 213, 511
BseNI ACTGG 4 cut(s) 14, 139, 395, 568
BseXI GCAGC 2 cut(s) 190, 389
BshFI GGCC 3 cut(s) 123, 255, 455
BsiHKAI GWGCWC 2 cut(s) 153, 337
BslFI GGGAC 1 cut(s) 64
BslI CCNNNNNNNGG 1 cut(s) 161
BsmFI GGGAC 1 cut(s) 64
BsnI GGCC 3 cut(s) 123, 255, 455
Bsp119I TTCGAA 1 cut(s) 167
Bsp1286I GDGCHC 2 cut(s) 153, 337
BspANI GGCC 3 cut(s) 123, 255, 455
BspLI GGNNCC 1 cut(s) 273
BspT104I TTCGAA 1 cut(s) 167
BsrDI GCAATG 2 cut(s) 213, 511
BsrI ACTGG 4 cut(s) 14, 139, 395, 568
BssECI CCNNGG 2 cut(s) 160, 256
BssNAI GTATAC 1 cut(s) 496
BssT1I CCWWGG 2 cut(s) 160, 256
Bst1107I GTATAC 1 cut(s) 496
Bst4CI ACNGT 2 cut(s) 200, 215
BstBAI YACGTR 1 cut(s) 555
BstBI TTCGAA 1 cut(s) 167
BstDEI CTNAG 1 cut(s) 461
BstEII GGTNACC 1 cut(s) 106
BstF5I GGATG 1 cut(s) 66
BstHHI GCGC 1 cut(s) 235
BstMWI GCNNNNNNNGC 1 cut(s) 261
BstNSI RCATGY 1 cut(s) 233
BstPI GGTNACC 1 cut(s) 106
BstV1I GCAGC 2 cut(s) 190, 389
BstZ17I GTATAC 1 cut(s) 496
BsuRI GGCC 3 cut(s) 123, 255, 455
BtsCI GGATG 1 cut(s) 66
BtsI GCAGTG 2 cut(s) 111, 481
BtsIMutI CAGTG 3 cut(s) 111, 196, 481
CfoI GCGC 1 cut(s) 235
Cfr13I GGNCC 1 cut(s) 253
Csp6I GTAC 1 cut(s) 388
CviAII CATG 2 cut(s) 230, 338
CviJI RGCY 6 cut(s) 123, 179, 255, 264, 335, 455
CviKI_1 RGCY 6 cut(s) 123, 179, 255, 264, 335, 455
CviQI GTAC 1 cut(s) 388
DdeI CTNAG 1 cut(s) 461
DriI GACNNNNNGTC 1 cut(s) 57
Eam1105I GACNNNNNGTC 1 cut(s) 57
Ecl136II GAGCTC 1 cut(s) 335
Eco130I CCWWGG 2 cut(s) 160, 256
Eco24I GRGCYC 1 cut(s) 337
Eco53kI GAGCTC 1 cut(s) 335
Eco72I CACGTG 1 cut(s) 555
Eco91I GGTNACC 1 cut(s) 106
EcoICRI GAGCTC 1 cut(s) 335
EcoO65I GGTNACC 1 cut(s) 106
EcoT14I CCWWGG 2 cut(s) 160, 256
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 2 cut(s) 160, 256
FaeI CATG 2 cut(s) 233, 341
FaqI GGGAC 1 cut(s) 64
FatI CATG 2 cut(s) 229, 337
FauNDI CATATG 1 cut(s) 367
FblI GTMKAC 1 cut(s) 495
Fnu4HI GCNGC 2 cut(s) 204, 378
FokI GGATG 1 cut(s) 53
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 2 cut(s) 204, 378
FspBI CTAG 3 cut(s) 125, 161, 257
GlaI GCGC 1 cut(s) 234
GluI GCNGC 2 cut(s) 204, 378
HaeIII GGCC 3 cut(s) 123, 255, 455
HhaI GCGC 1 cut(s) 235
Hin1II CATG 2 cut(s) 233, 341
Hin6I GCGC 1 cut(s) 233
HinP1I GCGC 1 cut(s) 233
HinfI GANTC 1 cut(s) 350
HphI GGTGA 2 cut(s) 353, 521
Hpy166II GTNNAC 1 cut(s) 496
Hpy188I TCNGA 2 cut(s) 420, 427
Hpy8I GTNNAC 1 cut(s) 496
HpyAV CCTTC 2 cut(s) 232, 532
HpyCH4III ACNGT 2 cut(s) 200, 215
HpyCH4IV ACGT 1 cut(s) 554
HpyCH4V TGCA 3 cut(s) 116, 206, 211
HpyF10VI GCNNNNNNNGC 1 cut(s) 261
HpyF3I CTNAG 1 cut(s) 461
HpySE526I ACGT 1 cut(s) 554
Hsp92II CATG 2 cut(s) 233, 341
HspAI GCGC 1 cut(s) 233
LmnI GCTCC 4 cut(s) 156, 219, 332, 395
LpnPI CCDG 5 cut(s) 11, 88, 152, 314, 376
Lsp1109I GCAGC 2 cut(s) 190, 389
LweI GCATC 2 cut(s) 75, 407
MaeI CTAG 3 cut(s) 125, 161, 257
MaeII ACGT 1 cut(s) 554
MaeIII GTNAC 3 cut(s) 106, 476, 550
MboII GAAGA 4 cut(s) 356, 359, 477, 480
MhlI GDGCHC 2 cut(s) 153, 337
MluCI AATT 1 cut(s) 413
MmeI TCCRAC 2 cut(s) 94, 197
MnlI CCTC 2 cut(s) 186, 466
MseI TTAA 2 cut(s) 434, 440
MwoI GCNNNNNNNGC 1 cut(s) 261
NdeI CATATG 1 cut(s) 367
NlaIII CATG 2 cut(s) 233, 341
NlaIV GGNNCC 1 cut(s) 273
NmuCI GTSAC 2 cut(s) 476, 550
NspI RCATGY 1 cut(s) 233
NspV TTCGAA 1 cut(s) 167
PfeI GAWTC 1 cut(s) 350
PflFI GACNNNGTC 1 cut(s) 284
PkrI GCNGC 2 cut(s) 205, 379
PmaCI CACGTG 1 cut(s) 555
PmlI CACGTG 1 cut(s) 555
Ppu21I YACGTR 1 cut(s) 555
Psp124BI GAGCTC 1 cut(s) 337
PspCI CACGTG 1 cut(s) 555
PspEI GGTNACC 1 cut(s) 106
PspN4I GGNNCC 1 cut(s) 273
PspPI GGNCC 1 cut(s) 253
PsyI GACNNNGTC 1 cut(s) 284
RsaI GTAC 1 cut(s) 389
RsaNI GTAC 1 cut(s) 388
SacI GAGCTC 1 cut(s) 337
SaqAI TTAA 2 cut(s) 434, 440
SatI GCNGC 2 cut(s) 204, 378
Sau96I GGNCC 1 cut(s) 253
ScaI AGTACT 1 cut(s) 389
SduI GDGCHC 2 cut(s) 153, 337
SetI ASST 5 cut(s) 162, 166, 181, 337, 557
SfaNI GCATC 2 cut(s) 75, 407
SfuI TTCGAA 1 cut(s) 167
SmlI CTYRAG 1 cut(s) 383
SmoI CTYRAG 1 cut(s) 383
Sse9I AATT 1 cut(s) 413
SspMI CTAG 3 cut(s) 125, 161, 257
SstI GAGCTC 1 cut(s) 337
StyI CCWWGG 2 cut(s) 160, 256
TaaI ACNGT 2 cut(s) 200, 215
TaiI ACGT 1 cut(s) 557
TaqI TCGA 1 cut(s) 167
TasI AATT 1 cut(s) 413
TatI WGTACW 1 cut(s) 387
TfiI GAWTC 1 cut(s) 350
Tru1I TTAA 2 cut(s) 434, 440
Tru9I TTAA 2 cut(s) 434, 440
TscAI CASTG 3 cut(s) 118, 203, 481
TseFI GTSAC 2 cut(s) 476, 550
TseI GCWGC 2 cut(s) 203, 377
Tsp45I GTSAC 2 cut(s) 476, 550
TspDTI ATGAA 4 cut(s) 17, 31, 50, 514
TspRI CASTG 3 cut(s) 118, 203, 481
Tth111I GACNNNGTC 1 cut(s) 284
XapI RAATTY 1 cut(s) 413
XceI RCATGY 1 cut(s) 233
XmaJI CCTAGG 2 cut(s) 160, 256
XmiI GTMKAC 1 cut(s) 495
XspI CTAG 3 cut(s) 125, 161, 257
ZrmI AGTACT 1 cut(s) 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.