Rorug05G0092500

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000484
Physical Location & Seq
Forward (+)
8146519 .. 8154294
7776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0092500.1

Sequence Viewer

Length: 2343 bp
ATGAAGCCAGTTTTCTTCATCATCATATCTCTTCTTCTCCTTCCTCTCTTGGCCTCATGCTCAAAGCAAAAGGTGTACATAGTGTATTTTGGAGAGCACGGTGGAGAGAAAGCATTGCATGAAATAGAGAACAGCCACCACTCCTATTTGCTTTCTGTGAAAGAAACTGAGGAAGATGCCAGAGCTTCACTGCTTTACAGTTACAAGCACAGCATCAATGGCTTTGCAGCAGTTCTCACTGAGGATGAAGCTTCCAAGTTATCTGAACTGGAAGAAGTTGTATCAGTGTGGCCGAGCCACCCAAGAAAGTACACTATGCACACAACAAGGTCATGGGAGTTTGTGGGGATATCTGAAGAAGAGGAAGAGGGGAATTACTGGACAAACAACCAGATGGGAGGAGACTTCTTATCCAAAGCAAGGTCTGGCAAGAACATCATTGTTGGAGTCCTTGATAGTGGTGTATGGCCAGAATCAAAGAGCTTCAGTGATGTAGGAATGGGGCCCATTCCAAAATCATGGAAGGGAATCTGCCAATCTGGAGTTGGCTTTAATTCGTCCCAGTGCAATAGGAAGCTGATAGGAGCTCGGTACTACCTCAAAGGGTTTGAGCAAAACTACGGTCCTCTTAATGCCTCTGAGGATTCTCGATCGCCACGTGACATGGATGGCCATGGAACCCACACGACCTCCACTGTGGCAGGCCGAGTCGTTCCCAATGCCTCAGCCATTGGCGGGTTCGCTCGTGGCTCTGCCTCCGGGGGTGCCCCATTGGCACGCGTTGCTGTGTACAAAGTGTGCTGGGCTATACCGGGCGCATCCAAGGCTGAAGGGAACACATGCTTTGAGGAGGACATGTTTGCAGCCATAGATGATGCCATAGCGGACGGTGTGGATGTGCTGAGCATATCAATTGGCACAACTCGACCTATGAATTTCACCGAGGACGGTATTGCTCTAGGAGCATTGCATGCCGCCAAGAAGAACATTGTGGTGGCATGTAGTGCTGGCAACTCAGGCCCTGCCCCATCTACATTATCAAACCCAGCTCCATGGATCATCACGGTTGGTGCCAGCAGCTTGGACCGAACTTTTATGTCACCCGTTGTGCTTGGAAATGGCTTGAGCATTGAGGGAGAAACAGTGACCCCAAGCAAGCTGGAAGAGAATAAGATGTACCCTTTAGTATATGCAGGGGATGTTGTTAACCCTGGTGTAGCCCAAAATCTGACAGGACAATGCCTCGCAGGCTCTCTTTCACCTGACAAAGTTAAGGGAAAGATAGTGTTCTGCTGGAGAGGTGCTGGGATGAGAGTTTCAAAAGGCATGGAAGTGAAAAGGGCGGGTGGTGTTGGTTTTATCTTAGGAAACAGCAAAGCAAATGGCGTTGAAATCTCGTGTGACGCTCATGTTCTTCCTGCCACTGCAATGACATACAGTAATGCCAATAGAATCATGGAATACGTCAACTCTACCAAAAATCCAAAGGCAACTATTATACCAGCAAGGACAGTGTTGAATACAAAGCCAGCTCCATACATGACTGCTTTCACTAGTAGAGGCCCAAGTACCATTGATCCTAACATTCTCAAGCCTGATATCACAGCTCCTGGACTGAATATATTGGCAGCATGGACTGAGGCTGATCCCCCTACCAAGTTGTCAATGGATCACCGAGTAGCTCAGTATAACATTGAGTCTGGAACTTCAATGTCTTGCCCTCACATTGCTGCGGCGGCAGCACTTCTTAAAGCCATCCACCCTACTTGGAGCAGTGCTGCCATCAAATCTGCTCTAATGACCACAGCGGGGATAAGAAACAACCTAGATAAGCTATTGAACGATGAATCGGGCAATGCTGCAACTCCCTTTGCATATGGTGCTGGCCACTTCCGACCCACCAAGGCAGCAGACCCTGGCCTTGTGTACGATGCTTCATACAAAGACTATCTTCTCTACTTCTGCAGTACCGGAGTCAAGAATTTCGATCCAAATTTCAAGTGTCCAAGATCACCACCAACAGCAATCAACCTGAACTATCCTTCCATTGCAATCCCCAAACTGAATGGCACCATCACGATTAAGAGGACAGTCACAAATGTTGGTGACCCCAAAAGCGTTTACTTCTTTACCTCCAAACCGCCTCTTGGAATCTCGGTTAAGGCCTCTCCGAGTATATTGTTCTTTGATCACGTTGGCCAGAGGAAGAGCTTCACCATTACTGTCAAAGCAAGGACAGAGATGCTTAACGAGAATCAGTTGAAAGATGAGTATGCATTTGGGTGGTACACATGGACTGATGGACCTCATATTGTAAGGAGTCCAATTGCAGTCTCTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

780

Amino Acids

83.75

Weight (kDa)

8.26

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 25 - 103 2.8e-20 Peptidase inhibitor I9
Peptidase_S8 PF00082 143 - 629 1e-40 Subtilase family
PA PF02225 394 - 485 4.1e-10 PA domain
fn3_6 PF17766 677 - 778 2.5e-29 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27290 AT4G27290
fragaria_vesca FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g21310 FvH4_3g21310
malus_domestica MD05G1219900.v1.1 MD05G1220200.v1.1 MD05G1230800.v1.1 MD05G1231100.v1.1 MD05G1231700.v1.1 MD05G1232100.v1.1 MD05G1232400.v1.1 MD05G1233000.v1.1 MD10G1202800.v1.1
prunus_persica Prupe.4G139500_v2.0.a1 Prupe.4G139500_v2.0.a1
pyrus_communis pycom05g20170 pycom05g20200 pycom05g20230 pycom05g20250 pycom05g20260 pycom05g20280 pycom05g20320 pycom05g20370 pycom05g20380 pycom05g24850 pycom10g17340
rosa_chinensis RchiOBHm_Chr5g0026351 RchiOBHm_Chr5g0026371 RchiOBHm_Chr5g0026381 RchiOBHm_Chr5g0026411 RchiOBHm_Chr5g0026551 RchiOBHm_Chr5g0036371
rosa_laevigata RLG00000032923 RLG00000032926 RLG00000032927 RLG00000032928 RLG00000032934 RLG00000033692
rosa_multiflora Rmu_co8389779.1_g000001 Rmu_sc0000712.1_g000012 Rmu_sc0001017.1_g000026 Rmu_sc0001114.1_g000001 Rmu_sc0001114.1_g000002 Rmu_sc0001114.1_g000008 Rmu_sc0005581.1_g000006 Rmu_sc0005581.1_g000007 Rmu_sc0006059.1_g000052 Rmu_sc0042966.1_g000001
rosa_roxburghii Rroxscaffold_1G00044440 Rroxscaffold_1G00052930 Rroxscaffold_1G00052980 Rroxscaffold_1G00052990 Rroxscaffold_1G00053000
rosa_rugosa Rorug05G0092500 Rorug05G0092500 Rorug05G0092500 Rorug05G0092600 Rorug05G0092700 Rorug05G0092700 Rorug05G0093700 Rorug05G0155200 Rorug05G0155800 Rorug05G0155800
rosa_samantha Rh5AG185700 Rh5AG186300 Rh5BG182600 Rh5BG182900 Rh5BG183600 Rh5BG249400 Rh5CG202000 Rh5CG202100 Rh5CG202200 Rh5CG203400 Rh5CG281200 Rh5DG184400 Rh5DG184500 Rh5DG185900
rosa_wichuraiana Rw5G016850 Rw5G016870 Rw5G016930 Rw5G022870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 764, 1070, 2069
AccII CGCG 1 cut(s) 780
AciI CCGC 8 cut(s) 735, 884, 975, 1343, 1733, 1736, 1808, 2141
AclWI GGATC 5 cut(s) 1064, 1571, 1640, 1677, 1982
AcoI YGGCCR 5 cut(s) 290, 467, 670, 1885, 2197
AcsI RAATTY 3 cut(s) 934, 1981, 1993
AcuI CTGAAG 3 cut(s) 375, 469, 849
AcvI CACGTG 1 cut(s) 659
AfaI GTAC 9 cut(s) 77, 311, 593, 791, 1178, 1570, 1928, 1969, 2288
AfiI CCNNNNNNNGG 4 cut(s) 420, 735, 1809, 2147
AflIII ACRYGT 2 cut(s) 778, 855
AgsI TTSAA 7 cut(s) 1320, 1391, 1519, 1710, 1840, 1999, 2263
AhlI ACTAGT 1 cut(s) 1553
AjnI CCWGG 3 cut(s) 1210, 1609, 1915
AloI GAACNNNNNNTCC 2 cut(s) 2027, 2059
Alw21I GWGCWC 2 cut(s) 99, 589
Alw26I GTCTC 2 cut(s) 396, 2338
AlwI GGATC 5 cut(s) 1064, 1571, 1640, 1677, 1982
AlwNI CAGNNNCTG 3 cut(s) 1022, 1610, 1916
ApaI GGGCCC 1 cut(s) 507
ApeKI GCWGC 9 cut(s) 227, 863, 1077, 1628, 1730, 1739, 1778, 1859, 1907
ApoI RAATTY 3 cut(s) 934, 1981, 1993
ArsI GACNNNNNNTTYG 2 cut(s) 607, 639
Asp700I GAANNNNTTC 1 cut(s) 2210
AspLEI GCGC 1 cut(s) 818
AspS9I GGNCC 7 cut(s) 503, 504, 623, 1019, 1084, 1562, 2303
AsuC2I CCSGG 2 cut(s) 760, 813
AsuHPI GGTGA 7 cut(s) 931, 1092, 1251, 1664, 2004, 2117, 2206
AvaII GGWCC 3 cut(s) 623, 1084, 2303
BaeGI GKGCMC 2 cut(s) 507, 769
BalI TGGCCA 4 cut(s) 469, 672, 1887, 2199
BanI GGYRCC 3 cut(s) 764, 1070, 2069
BanII GRGCYC 2 cut(s) 507, 589
BauI CACGAG 2 cut(s) 744, 1396
BbrPI CACGTG 1 cut(s) 659
Bbv12I GWGCWC 2 cut(s) 99, 589
BbvCI CCTCAGC 1 cut(s) 724
BbvI GCAGC 9 cut(s) 239, 875, 1089, 1640, 1717, 1751, 1765, 1846, 1919
BccI CCATC 7 cut(s) 388, 662, 1036, 1763, 1790, 2081, 2294
BciT130I CCWGG 3 cut(s) 1212, 1611, 1917
BclI TGATCA 1 cut(s) 2188
BcnI CCSGG 2 cut(s) 760, 813
BcoDI GTCTC 2 cut(s) 396, 2338
BcuI ACTAGT 1 cut(s) 1553
BfaI CTAG 3 cut(s) 959, 1554, 1826
BfmI CTRYAG 1 cut(s) 1963
BglI GCCNNNNNGGC 2 cut(s) 773, 1248
BlpI GCTNAGC 1 cut(s) 902
Bme1390I CCNGG 5 cut(s) 760, 813, 1212, 1611, 1917
Bme18I GGWCC 3 cut(s) 623, 1084, 2303
BmgT120I GGNCC 7 cut(s) 503, 504, 623, 1019, 1084, 1562, 2303
BmiI GGNNCC 6 cut(s) 504, 505, 679, 766, 1072, 2071
BmrFI CCNGG 5 cut(s) 760, 813, 1212, 1611, 1917
BmrI ACTGGG 1 cut(s) 556
BmsI GCATC 6 cut(s) 166, 222, 827, 865, 1921, 2232
BmuI ACTGGG 1 cut(s) 556
BpmI CTGGAG 2 cut(s) 561, 1315
Bpu10I CCTNAGC 1 cut(s) 724
Bpu1102I GCTNAGC 1 cut(s) 902
BpuEI CTTGAG 2 cut(s) 1144, 1574
BpuMI CCSGG 2 cut(s) 760, 813
BsaAI YACGTR 1 cut(s) 659
BsaJI CCNNGG 8 cut(s) 673, 759, 822, 942, 1052, 1210, 1902, 1915
BsaWI WCCGGW 1 cut(s) 1970
BsaXI ACNNNNNCTCC 6 cut(s) 674, 704, 842, 872, 1128, 1158
Bsc4I CCNNNNNNNGG 4 cut(s) 420, 735, 1809, 2147
Bse1I ACTGG 4 cut(s) 8, 273, 383, 562
Bse3DI GCAATG 6 cut(s) 113, 965, 1434, 1725, 1861, 2046
BseBI CCWGG 3 cut(s) 1212, 1611, 1917
BseDI CCNNGG 8 cut(s) 673, 759, 822, 942, 1052, 1210, 1902, 1915
BseGI GGATG 7 cut(s) 250, 673, 818, 901, 1204, 1314, 1755
BseLI CCNNNNNNNGG 4 cut(s) 420, 735, 1809, 2147
BseMI GCAATG 6 cut(s) 113, 965, 1434, 1725, 1861, 2046
BseMII CTCAG 8 cut(s) 159, 231, 630, 738, 893, 1029, 1629, 1697
BseNI ACTGG 4 cut(s) 8, 273, 383, 562
BseRI GAGGAG 2 cut(s) 414, 863
BseSI GKGCMC 2 cut(s) 507, 769
BseXI GCAGC 9 cut(s) 239, 875, 1089, 1640, 1717, 1751, 1765, 1846, 1919
BseYI CCCAGC 3 cut(s) 801, 1045, 1304
Bsh1236I CGCG 1 cut(s) 780
Bsh1285I CGRYCG 1 cut(s) 653
BshNI GGYRCC 3 cut(s) 764, 1070, 2069
BsiEI CGRYCG 1 cut(s) 653
BsiHKAI GWGCWC 2 cut(s) 99, 589
BsiSI CCGG 3 cut(s) 759, 812, 1971
BslFI GGGAC 1 cut(s) 544
BslI CCNNNNNNNGG 4 cut(s) 420, 735, 1809, 2147
BsmAI GTCTC 2 cut(s) 396, 2338
BsmFI GGGAC 1 cut(s) 544
Bsp120I GGGCCC 1 cut(s) 503
Bsp1286I GDGCHC 4 cut(s) 99, 507, 589, 769
Bsp1407I TGTACA 2 cut(s) 75, 789
Bsp143I GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
Bsp1720I GCTNAGC 1 cut(s) 902
Bsp19I CCATGG 2 cut(s) 673, 1052
BspACI CCGC 8 cut(s) 735, 884, 975, 1343, 1733, 1736, 1808, 2141
BspCNI CTCAG 8 cut(s) 160, 232, 631, 737, 894, 1028, 1630, 1696
BspFNI CGCG 1 cut(s) 780
BspLI GGNNCC 6 cut(s) 504, 505, 679, 766, 1072, 2071
BspMAI CTGCAG 1 cut(s) 1967
BspPI GGATC 5 cut(s) 1064, 1571, 1640, 1677, 1982
BspQI GCTCTTC 1 cut(s) 2201
BspT107I GGYRCC 3 cut(s) 764, 1070, 2069
BsrDI GCAATG 6 cut(s) 113, 965, 1434, 1725, 1861, 2046
BsrGI TGTACA 2 cut(s) 75, 789
BsrI ACTGG 4 cut(s) 8, 273, 383, 562
BssECI CCNNGG 8 cut(s) 673, 759, 822, 942, 1052, 1210, 1902, 1915
BssMI GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
BssSI CACGAG 2 cut(s) 744, 1396
BssT1I CCWWGG 4 cut(s) 673, 822, 1052, 1902
Bst2BI CACGAG 2 cut(s) 744, 1396
Bst2UI CCWGG 3 cut(s) 1212, 1611, 1917
Bst6I CTCTTC 5 cut(s) 36, 354, 360, 1158, 2201
BstAPI GCANNNNNTGC 4 cut(s) 782, 971, 1004, 1880
BstAUI TGTACA 2 cut(s) 75, 789
BstBAI YACGTR 1 cut(s) 659
BstC8I GCNNGC 9 cut(s) 703, 778, 972, 1009, 1075, 1157, 1249, 1530, 1885
BstDEI CTNAG 9 cut(s) 168, 240, 639, 724, 902, 1015, 1363, 1638, 1683
BstDSI CCRYGG 2 cut(s) 673, 1052
BstEII GGTNACC 1 cut(s) 2105
BstF5I GGATG 7 cut(s) 250, 673, 818, 901, 1204, 1314, 1755
BstFNI CGCG 1 cut(s) 780
BstHHI GCGC 1 cut(s) 818
BstKTI GATC 8 cut(s) 653, 1059, 1579, 1648, 1672, 1990, 2012, 2191
BstMAI GTCTC 2 cut(s) 396, 2338
BstMBI GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
BstMCI CGRYCG 1 cut(s) 653
BstNI CCWGG 3 cut(s) 1212, 1611, 1917
BstNSI RCATGY 4 cut(s) 843, 859, 974, 1002
BstPI GGTNACC 1 cut(s) 2105
BstSCI CCNGG 5 cut(s) 758, 811, 1210, 1609, 1915
BstSFI CTRYAG 1 cut(s) 1963
BstSLI GKGCMC 2 cut(s) 507, 769
BstUI CGCG 1 cut(s) 780
BstV1I GCAGC 9 cut(s) 239, 875, 1089, 1640, 1717, 1751, 1765, 1846, 1919
BstXI CCANNNNNNTGG 3 cut(s) 519, 1053, 1081
BtgI CCRYGG 2 cut(s) 673, 1052
BtsCI GGATG 7 cut(s) 250, 673, 818, 901, 1204, 1314, 1755
BtsI GCAGTG 3 cut(s) 188, 1422, 1780
Cac8I GCNNGC 9 cut(s) 703, 778, 972, 1009, 1075, 1157, 1249, 1530, 1885
CaiI CAGNNNCTG 3 cut(s) 1022, 1610, 1916
CfoI GCGC 1 cut(s) 818
Cfr13I GGNCC 7 cut(s) 503, 504, 623, 1019, 1084, 1562, 2303
CseI GACGC 1 cut(s) 1412
Csp6I GTAC 9 cut(s) 76, 310, 592, 790, 1177, 1569, 1927, 1968, 2287
CspCI CAANNNNNGTGG 2 cut(s) 1748, 1783
CviQI GTAC 9 cut(s) 76, 310, 592, 790, 1177, 1569, 1927, 1968, 2287
DdeI CTNAG 9 cut(s) 168, 240, 639, 724, 902, 1015, 1363, 1638, 1683
DpnI GATC 8 cut(s) 652, 1058, 1578, 1647, 1671, 1989, 2011, 2190
DpnII GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
EaeI YGGCCR 5 cut(s) 290, 467, 670, 1885, 2197
Eam1104I CTCTTC 5 cut(s) 36, 354, 360, 1158, 2201
EarI CTCTTC 5 cut(s) 36, 354, 360, 1158, 2201
Ecl136II GAGCTC 1 cut(s) 587
Eco130I CCWWGG 4 cut(s) 673, 822, 1052, 1902
Eco147I AGGCCT 1 cut(s) 2165
Eco24I GRGCYC 2 cut(s) 507, 589
Eco32I GATATC 2 cut(s) 351, 1600
Eco47I GGWCC 3 cut(s) 623, 1084, 2303
Eco53kI GAGCTC 1 cut(s) 587
Eco57I CTGAAG 3 cut(s) 375, 469, 849
Eco72I CACGTG 1 cut(s) 659
Eco91I GGTNACC 1 cut(s) 2105
EcoICRI GAGCTC 1 cut(s) 587
EcoO109I RGGNCCY 2 cut(s) 503, 1019
EcoO65I GGTNACC 1 cut(s) 2105
EcoRII CCWGG 3 cut(s) 1210, 1609, 1915
EcoRV GATATC 2 cut(s) 351, 1600
EcoT14I CCWWGG 4 cut(s) 673, 822, 1052, 1902
EcoT22I ATGCAT 1 cut(s) 2278
EcoT38I GRGCYC 2 cut(s) 507, 589
ErhI CCWWGG 4 cut(s) 673, 822, 1052, 1902
FalI AAGNNNNNCTT 2 cut(s) 1935, 1967
FaqI GGGAC 1 cut(s) 544
FauI CCCGC 3 cut(s) 728, 1336, 1801
FauNDI CATATG 1 cut(s) 1876
FbaI TGATCA 1 cut(s) 2188
FokI GGATG 7 cut(s) 257, 680, 805, 908, 1211, 1321, 1742
FriOI GRGCYC 2 cut(s) 507, 589
FspBI CTAG 3 cut(s) 959, 1554, 1826
GlaI GCGC 1 cut(s) 817
GsaI CCCAGC 3 cut(s) 805, 1049, 1308
GsuI CTGGAG 2 cut(s) 561, 1315
HapII CCGG 3 cut(s) 759, 812, 1971
HgaI GACGC 1 cut(s) 1412
HhaI GCGC 1 cut(s) 818
Hin6I GCGC 1 cut(s) 816
HinP1I GCGC 1 cut(s) 816
HincII GTYRAC 2 cut(s) 1207, 1468
HindII GTYRAC 2 cut(s) 1207, 1468
HindIII AAGCTT 1 cut(s) 249
HpaI GTTAAC 1 cut(s) 1207
HpaII CCGG 3 cut(s) 759, 812, 1971
HphI GGTGA 7 cut(s) 931, 1092, 1251, 1664, 2004, 2117, 2206
Hpy166II GTNNAC 8 cut(s) 76, 312, 790, 1207, 1468, 1927, 2122, 2289
Hpy188I TCNGA 6 cut(s) 265, 355, 640, 1230, 1895, 2172
Hpy188III TCNNGA 5 cut(s) 540, 648, 1701, 1978, 2077
Hpy8I GTNNAC 8 cut(s) 76, 312, 790, 1207, 1468, 1927, 2122, 2289
HpyAV CCTTC 4 cut(s) 50, 517, 824, 2052
HpyCH4IV ACGT 3 cut(s) 658, 1464, 2193
HpyF3I CTNAG 9 cut(s) 168, 240, 639, 724, 902, 1015, 1363, 1638, 1683
HpySE526I ACGT 3 cut(s) 658, 1464, 2193
HspAI GCGC 1 cut(s) 816
Ksp22I TGATCA 1 cut(s) 2188
KspAI GTTAAC 1 cut(s) 1207
Kzo9I GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
LguI GCTCTTC 1 cut(s) 2201
LmnI GCTCC 6 cut(s) 584, 962, 1054, 1537, 1612, 1770
Lsp1109I GCAGC 9 cut(s) 239, 875, 1089, 1640, 1717, 1751, 1765, 1846, 1919
LweI GCATC 6 cut(s) 166, 222, 827, 865, 1921, 2232
MaeI CTAG 3 cut(s) 959, 1554, 1826
MaeII ACGT 3 cut(s) 658, 1464, 2193
MaeIII GTNAC 7 cut(s) 200, 659, 1098, 1144, 1400, 2092, 2105
MalI GATC 8 cut(s) 652, 1058, 1578, 1647, 1671, 1989, 2011, 2190
MboI GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
MfeI CAATTG 2 cut(s) 912, 2325
MhlI GDGCHC 4 cut(s) 99, 507, 589, 769
MlsI TGGCCA 4 cut(s) 469, 672, 1887, 2199
MluCI AATT 7 cut(s) 373, 553, 912, 934, 1981, 1993, 2325
MluI ACGCGT 1 cut(s) 778
MluNI TGGCCA 4 cut(s) 469, 672, 1887, 2199
MlyI GAGTC 5 cut(s) 456, 717, 1706, 1983, 2329
MmeI TCCRAC 2 cut(s) 424, 1918
Mox20I TGGCCA 4 cut(s) 469, 672, 1887, 2199
Mph1103I ATGCAT 1 cut(s) 2278
MroXI GAANNNNTTC 1 cut(s) 2210
MscI TGGCCA 4 cut(s) 469, 672, 1887, 2199
MseI TTAA 8 cut(s) 552, 630, 1206, 1272, 1749, 2082, 2160, 2247
MslI CAYNNNNRTG 4 cut(s) 992, 1331, 1427, 2281
Msp20I TGGCCA 4 cut(s) 469, 672, 1887, 2199
MspA1I CMGCKG 1 cut(s) 1808
MspI CCGG 3 cut(s) 759, 812, 1971
MspR9I CCNGG 5 cut(s) 760, 813, 1212, 1611, 1917
MunI CAATTG 2 cut(s) 912, 2325
MvaI CCWGG 3 cut(s) 1212, 1611, 1917
MvnI CGCG 1 cut(s) 780
NciI CCSGG 2 cut(s) 760, 813
NcoI CCATGG 2 cut(s) 673, 1052
NdeI CATATG 1 cut(s) 1876
NdeII GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
NlaIV GGNNCC 6 cut(s) 504, 505, 679, 766, 1072, 2071
NmeAIII GCCGAG 2 cut(s) 318, 731
NmuCI GTSAC 6 cut(s) 659, 1098, 1144, 1400, 2092, 2105
NsiI ATGCAT 1 cut(s) 2278
NspI RCATGY 4 cut(s) 843, 859, 974, 1002
PaeI GCATGC 1 cut(s) 974
PceI AGGCCT 1 cut(s) 2165
PciI ACATGT 1 cut(s) 855
PciSI GCTCTTC 1 cut(s) 2201
PcsI WCGNNNNNNNCGW 1 cut(s) 655
PdmI GAANNNNTTC 1 cut(s) 2210
PfeI GAWTC 7 cut(s) 473, 528, 644, 1452, 1847, 2151, 2254
PfoI TCCNGGA 1 cut(s) 1609
Ple19I CGATCG 1 cut(s) 653
PleI GAGTC 5 cut(s) 455, 716, 1705, 1982, 2328
PmaCI CACGTG 1 cut(s) 659
PmlI CACGTG 1 cut(s) 659
PpsI GAGTC 5 cut(s) 455, 716, 1705, 1982, 2328
Ppu21I YACGTR 1 cut(s) 659
PscI ACATGT 1 cut(s) 855
Psp124BI GAGCTC 1 cut(s) 589
Psp6I CCWGG 3 cut(s) 1210, 1609, 1915
PspCI CACGTG 1 cut(s) 659
PspEI GGTNACC 1 cut(s) 2105
PspFI CCCAGC 3 cut(s) 801, 1045, 1304
PspGI CCWGG 3 cut(s) 1210, 1609, 1915
PspN4I GGNNCC 6 cut(s) 504, 505, 679, 766, 1072, 2071
PspOMI GGGCCC 1 cut(s) 503
PspPI GGNCC 7 cut(s) 503, 504, 623, 1019, 1084, 1562, 2303
PstI CTGCAG 1 cut(s) 1967
PstNI CAGNNNCTG 3 cut(s) 1022, 1610, 1916
PvuI CGATCG 1 cut(s) 653
RsaI GTAC 9 cut(s) 77, 311, 593, 791, 1178, 1570, 1928, 1969, 2288
RsaNI GTAC 9 cut(s) 76, 310, 592, 790, 1177, 1569, 1927, 1968, 2287
RseI CAYNNNNRTG 4 cut(s) 992, 1331, 1427, 2281
SacI GAGCTC 1 cut(s) 589
SapI GCTCTTC 1 cut(s) 2201
SaqAI TTAA 8 cut(s) 552, 630, 1206, 1272, 1749, 2082, 2160, 2247
Sau3AI GATC 8 cut(s) 650, 1056, 1576, 1645, 1669, 1987, 2009, 2188
Sau96I GGNCC 7 cut(s) 503, 504, 623, 1019, 1084, 1562, 2303
SchI GAGTC 5 cut(s) 456, 717, 1706, 1983, 2329
ScrFI CCNGG 5 cut(s) 760, 813, 1212, 1611, 1917
SduI GDGCHC 4 cut(s) 99, 507, 589, 769
SfaNI GCATC 6 cut(s) 166, 222, 827, 865, 1921, 2232
SfcI CTRYAG 1 cut(s) 1963
SinI GGWCC 3 cut(s) 623, 1084, 2303
SmiMI CAYNNNNRTG 4 cut(s) 992, 1331, 1427, 2281
SmlI CTYRAG 2 cut(s) 1123, 1589
SmoI CTYRAG 2 cut(s) 1123, 1589
SpeI ACTAGT 1 cut(s) 1553
SphI GCATGC 1 cut(s) 974
Sse9I AATT 7 cut(s) 373, 553, 912, 934, 1981, 1993, 2325
SseBI AGGCCT 1 cut(s) 2165
SsiI CCGC 8 cut(s) 735, 884, 975, 1343, 1733, 1736, 1808, 2141
SspMI CTAG 3 cut(s) 959, 1554, 1826
SstI GAGCTC 1 cut(s) 589
StuI AGGCCT 1 cut(s) 2165
StyD4I CCNGG 5 cut(s) 758, 811, 1210, 1609, 1915
StyI CCWWGG 4 cut(s) 673, 822, 1052, 1902
TaiI ACGT 3 cut(s) 661, 1467, 2196
TaqI TCGA 3 cut(s) 649, 925, 1986
TaqII GACCGA 1 cut(s) 1101
TasI AATT 7 cut(s) 373, 553, 912, 934, 1981, 1993, 2325
TatI WGTACW 3 cut(s) 75, 309, 789
TauI GCSGC 3 cut(s) 977, 1736, 1739
TfiI GAWTC 7 cut(s) 473, 528, 644, 1452, 1847, 2151, 2254
Tru1I TTAA 8 cut(s) 552, 630, 1206, 1272, 1749, 2082, 2160, 2247
Tru9I TTAA 8 cut(s) 552, 630, 1206, 1272, 1749, 2082, 2160, 2247
TseFI GTSAC 6 cut(s) 659, 1098, 1144, 1400, 2092, 2105
TseI GCWGC 9 cut(s) 227, 863, 1077, 1628, 1730, 1739, 1778, 1859, 1907
Tsp45I GTSAC 6 cut(s) 659, 1098, 1144, 1400, 2092, 2105
TspDTI ATGAA 7 cut(s) 7, 17, 135, 261, 947, 1860, 1926
VpaK11BI GGWCC 3 cut(s) 623, 1084, 2303
XapI RAATTY 3 cut(s) 934, 1981, 1993
XceI RCATGY 4 cut(s) 843, 859, 974, 1002
XcmI CCANNNNNNNNNTGG 3 cut(s) 542, 1453, 1663
XmnI GAANNNNTTC 1 cut(s) 2210
XspI CTAG 3 cut(s) 959, 1554, 1826
Zsp2I ATGCAT 1 cut(s) 2278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.