Rmu_sc0006059.1_g000052

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006059.1
Physical Location & Seq
Forward (+)
194419 .. 195156
738 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006059.1_g000052.1.cds

Sequence Viewer

Length: 738 bp
atgaaatatggagtaaacttggtaacaggcctgaaccggttcctgacgtcatggaagagtgatcaggatccttccagaggggcttatacgaatcagcttgacataactgggttaccgcaatttttactaaagaaaggttctgtagtgcagttcaggtctggatcttggaatggtctcagatttactggaatgcctaatttgaaaccaaatcccatatatacctatgagtttgtatataatgaggaggaaatatattaccattaccaactcattaacagctcactttctacaaggttaacactaaaccctaatggaaacctccagcgtttcacatggattgacagaattcaggatttgagcctttacttgactgcacaaatagatgactgtgacaggtatgcaatatgtggtgcatatggtaactgcaacattaacaactgcccttcttgtggatgcttaaaaggttttgctccgaaatccccccaagactgggaggtggcagattggtcacatggctgtgtgcgaaacactccactggattgccacgatggagagggttttctaaaatattctggcattaaattgccagatacacagcattcctggtataacaagacaacgaacctcaaagaatgtgaacaggtttgcttgaagaactgcaattgcacgtcttatgctaatttggatattagaggagaaggaagtggcgtgcatactctggcttggagaactgattga

Protein Analysis

245

Amino Acids

27.86

Weight (kDa)

6.51

Isoelectric Point (pI)

29.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27290 AT4G27290
fragaria_vesca FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g21310 FvH4_3g21310
malus_domestica MD05G1219900.v1.1 MD05G1220200.v1.1 MD05G1230800.v1.1 MD05G1231100.v1.1 MD05G1231700.v1.1 MD05G1232100.v1.1 MD05G1232400.v1.1 MD05G1233000.v1.1 MD10G1202800.v1.1
prunus_persica Prupe.4G139500_v2.0.a1 Prupe.4G139500_v2.0.a1
pyrus_communis pycom05g20170 pycom05g20200 pycom05g20230 pycom05g20250 pycom05g20260 pycom05g20280 pycom05g20320 pycom05g20370 pycom05g20380 pycom05g24850 pycom10g17340
rosa_chinensis RchiOBHm_Chr5g0026351 RchiOBHm_Chr5g0026371 RchiOBHm_Chr5g0026381 RchiOBHm_Chr5g0026411 RchiOBHm_Chr5g0026551 RchiOBHm_Chr5g0036371
rosa_laevigata RLG00000032923 RLG00000032926 RLG00000032927 RLG00000032928 RLG00000032934 RLG00000033692
rosa_multiflora Rmu_co8389779.1_g000001 Rmu_sc0000712.1_g000012 Rmu_sc0001017.1_g000026 Rmu_sc0001114.1_g000001 Rmu_sc0001114.1_g000002 Rmu_sc0001114.1_g000008 Rmu_sc0005581.1_g000006 Rmu_sc0005581.1_g000007 Rmu_sc0006059.1_g000052 Rmu_sc0042966.1_g000001
rosa_roxburghii Rroxscaffold_1G00044440 Rroxscaffold_1G00052930 Rroxscaffold_1G00052980 Rroxscaffold_1G00052990 Rroxscaffold_1G00053000
rosa_rugosa Rorug05G0092500 Rorug05G0092500 Rorug05G0092500 Rorug05G0092600 Rorug05G0092700 Rorug05G0092700 Rorug05G0093700 Rorug05G0155200 Rorug05G0155800 Rorug05G0155800
rosa_samantha Rh5AG185700 Rh5AG186300 Rh5BG182600 Rh5BG182900 Rh5BG183600 Rh5BG249400 Rh5CG202000 Rh5CG202100 Rh5CG202200 Rh5CG203400 Rh5CG281200 Rh5DG184400 Rh5DG184500 Rh5DG185900
rosa_wichuraiana Rw5G016850 Rw5G016870 Rw5G016930 Rw5G022870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 50
AciI CCGC 1 cut(s) 116
AclWI GGATC 3 cut(s) 62, 75, 169
AcsI RAATTY 1 cut(s) 345
AcyI GRCGYC 1 cut(s) 47
AfiI CCNNNNNNNGG 4 cut(s) 77, 449, 489, 490
AgeI ACCGGT 1 cut(s) 36
AgsI TTSAA 2 cut(s) 202, 652
AjiI CACGTC 1 cut(s) 669
AjnI CCWGG 1 cut(s) 602
AluBI AGCT 2 cut(s) 97, 279
AluI AGCT 2 cut(s) 97, 279
Alw26I GTCTC 1 cut(s) 179
AlwI GGATC 3 cut(s) 62, 75, 169
AoxI GGCC 1 cut(s) 28
ApoI RAATTY 1 cut(s) 345
AsiGI ACCGGT 1 cut(s) 36
Asp700I GAANNNNTTC 1 cut(s) 38
BamHI GGATCC 1 cut(s) 67
BccI CCATC 1 cut(s) 542
BciT130I CCWGG 1 cut(s) 604
BclI TGATCA 1 cut(s) 61
BcoDI GTCTC 1 cut(s) 179
BfmI CTRYAG 1 cut(s) 141
Bme1390I CCNGG 1 cut(s) 604
BmgBI CACGTC 1 cut(s) 669
BmiI GGNNCC 2 cut(s) 41, 69
BmrFI CCNGG 1 cut(s) 604
BmrI ACTGGG 2 cut(s) 117, 499
BmsI GCATC 1 cut(s) 443
BmuI ACTGGG 2 cut(s) 117, 499
BpmI CTGGAG 1 cut(s) 305
BsaBI GATNNNNATC 1 cut(s) 66
BsaHI GRCGYC 1 cut(s) 47
BsaI GGTCTC 1 cut(s) 179
BsaWI WCCGGW 1 cut(s) 36
Bsc4I CCNNNNNNNGG 4 cut(s) 77, 449, 489, 490
Bse118I RCCGGY 1 cut(s) 36
Bse1I ACTGG 4 cut(s) 112, 190, 494, 540
Bse8I GATNNNNATC 1 cut(s) 66
BseBI CCWGG 1 cut(s) 604
BseGI GGATG 1 cut(s) 458
BseJI GATNNNNATC 1 cut(s) 66
BseLI CCNNNNNNNGG 4 cut(s) 77, 449, 489, 490
BseMII CTCAG 1 cut(s) 190
BseNI ACTGG 4 cut(s) 112, 190, 494, 540
BseRI GAGGAG 2 cut(s) 257, 708
BsgI GTGCAG 2 cut(s) 167, 357
BshFI GGCC 1 cut(s) 30
BshTI ACCGGT 1 cut(s) 36
BsiSI CCGG 1 cut(s) 37
BslI CCNNNNNNNGG 4 cut(s) 77, 449, 489, 490
BsmAI GTCTC 1 cut(s) 179
BsmI GAATGC 2 cut(s) 195, 598
BsnI GGCC 1 cut(s) 30
Bso31I GGTCTC 1 cut(s) 179
Bsp143I GATC 3 cut(s) 61, 67, 161
BspACI CCGC 1 cut(s) 116
BspANI GGCC 1 cut(s) 30
BspCNI CTCAG 1 cut(s) 189
BspLI GGNNCC 2 cut(s) 41, 69
BspPI GGATC 3 cut(s) 62, 75, 169
BspTNI GGTCTC 1 cut(s) 179
BsrFI RCCGGY 1 cut(s) 36
BsrI ACTGG 4 cut(s) 112, 190, 494, 540
BssAI RCCGGY 1 cut(s) 36
BssMI GATC 3 cut(s) 61, 67, 161
BssNI GRCGYC 1 cut(s) 47
Bst2UI CCWGG 1 cut(s) 604
Bst4CI ACNGT 1 cut(s) 389
Bst6I CTCTTC 1 cut(s) 50
BstACI GRCGYC 1 cut(s) 47
BstC8I GCNNGC 1 cut(s) 710
BstDEI CTNAG 1 cut(s) 176
BstEII GGTNACC 1 cut(s) 111
BstENI CCTNNNNNAGG 1 cut(s) 75
BstF5I GGATG 1 cut(s) 458
BstKTI GATC 3 cut(s) 64, 70, 164
BstMAI GTCTC 1 cut(s) 179
BstMBI GATC 3 cut(s) 61, 67, 161
BstNI CCWGG 1 cut(s) 604
BstPI GGTNACC 1 cut(s) 111
BstSCI CCNGG 1 cut(s) 602
BstSFI CTRYAG 1 cut(s) 141
BstX2I RGATCY 2 cut(s) 67, 161
BstYI RGATCY 2 cut(s) 67, 161
BsuRI GGCC 1 cut(s) 30
BtrI CACGTC 1 cut(s) 669
BtsCI GGATG 1 cut(s) 458
BtsIMutI CAGTG 1 cut(s) 533
Cac8I GCNNGC 1 cut(s) 710
Cfr10I RCCGGY 1 cut(s) 36
CspAI ACCGGT 1 cut(s) 36
CviAII CATG 3 cut(s) 51, 333, 512
CviJI RGCY 7 cut(s) 30, 83, 97, 279, 360, 516, 722
CviKI_1 RGCY 7 cut(s) 30, 83, 97, 279, 360, 516, 722
DdeI CTNAG 1 cut(s) 176
DpnI GATC 3 cut(s) 63, 69, 163
DpnII GATC 3 cut(s) 61, 67, 161
Eam1104I CTCTTC 1 cut(s) 50
EarI CTCTTC 1 cut(s) 50
Eco147I AGGCCT 1 cut(s) 30
Eco31I GGTCTC 1 cut(s) 179
Eco91I GGTNACC 1 cut(s) 111
EcoNI CCTNNNNNAGG 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 111
EcoRI GAATTC 1 cut(s) 345
EcoRII CCWGG 1 cut(s) 602
FaeI CATG 3 cut(s) 54, 336, 515
FatI CATG 3 cut(s) 50, 332, 511
FauNDI CATATG 1 cut(s) 415
FbaI TGATCA 1 cut(s) 61
FokI GGATG 1 cut(s) 465
GsuI CTGGAG 1 cut(s) 305
HaeIII GGCC 1 cut(s) 30
HapII CCGG 1 cut(s) 37
Hin1I GRCGYC 1 cut(s) 47
Hin1II CATG 3 cut(s) 54, 336, 515
HincII GTYRAC 1 cut(s) 297
HindII GTYRAC 1 cut(s) 297
HinfI GANTC 1 cut(s) 91
HpaI GTTAAC 1 cut(s) 297
HpaII CCGG 1 cut(s) 37
Hpy166II GTNNAC 3 cut(s) 16, 297, 638
Hpy188I TCNGA 2 cut(s) 179, 474
Hpy188III TCNNGA 5 cut(s) 43, 65, 75, 159, 350
Hpy8I GTNNAC 3 cut(s) 16, 297, 638
HpyAV CCTTC 3 cut(s) 81, 453, 692
HpyCH4III ACNGT 1 cut(s) 389
HpyCH4IV ACGT 2 cut(s) 47, 668
HpyCH4V TGCA 8 cut(s) 148, 374, 401, 413, 426, 660, 666, 712
HpyF3I CTNAG 1 cut(s) 176
HpySE526I ACGT 2 cut(s) 47, 668
Hsp92I GRCGYC 1 cut(s) 47
Hsp92II CATG 3 cut(s) 54, 336, 515
Ksp22I TGATCA 1 cut(s) 61
KspAI GTTAAC 1 cut(s) 297
Kzo9I GATC 3 cut(s) 61, 67, 161
LmnI GCTCC 1 cut(s) 475
LweI GCATC 1 cut(s) 443
MaeII ACGT 2 cut(s) 47, 668
MaeIII GTNAC 5 cut(s) 22, 111, 389, 419, 507
MalI GATC 3 cut(s) 63, 69, 163
MboI GATC 3 cut(s) 61, 67, 161
MboII GAAGA 2 cut(s) 67, 664
MfeI CAATTG 1 cut(s) 661
MflI RGATCY 2 cut(s) 67, 161
MluCI AATT 6 cut(s) 119, 196, 345, 581, 661, 679
MnlI CCTC 8 cut(s) 71, 235, 238, 329, 487, 547, 635, 686
MroXI GAANNNNTTC 1 cut(s) 38
MseI TTAA 5 cut(s) 273, 296, 432, 458, 579
MslI CAYNNNNRTG 1 cut(s) 516
MspI CCGG 1 cut(s) 37
MspR9I CCNGG 1 cut(s) 604
MunI CAATTG 1 cut(s) 661
Mva1269I GAATGC 2 cut(s) 195, 598
MvaI CCWGG 1 cut(s) 604
NdeI CATATG 1 cut(s) 415
NdeII GATC 3 cut(s) 61, 67, 161
NlaIII CATG 3 cut(s) 54, 336, 515
NlaIV GGNNCC 2 cut(s) 41, 69
NmuCI GTSAC 2 cut(s) 389, 507
PceI AGGCCT 1 cut(s) 30
PctI GAATGC 2 cut(s) 195, 598
PdmI GAANNNNTTC 1 cut(s) 38
PfeI GAWTC 1 cut(s) 91
PinAI ACCGGT 1 cut(s) 36
Psp6I CCWGG 1 cut(s) 602
PspEI GGTNACC 1 cut(s) 111
PspGI CCWGG 1 cut(s) 602
PspN4I GGNNCC 2 cut(s) 41, 69
PsuI RGATCY 2 cut(s) 67, 161
RseI CAYNNNNRTG 1 cut(s) 516
SaqAI TTAA 5 cut(s) 273, 296, 432, 458, 579
Sau3AI GATC 3 cut(s) 61, 67, 161
ScrFI CCNGG 1 cut(s) 604
SfaNI GCATC 1 cut(s) 443
SfcI CTRYAG 1 cut(s) 141
SmiMI CAYNNNNRTG 1 cut(s) 516
Sse9I AATT 6 cut(s) 119, 196, 345, 581, 661, 679
SseBI AGGCCT 1 cut(s) 30
SsiI CCGC 1 cut(s) 116
SspI AATATT 1 cut(s) 569
StuI AGGCCT 1 cut(s) 30
StyD4I CCNGG 1 cut(s) 602
TaaI ACNGT 1 cut(s) 389
TaiI ACGT 2 cut(s) 50, 671
TasI AATT 6 cut(s) 119, 196, 345, 581, 661, 679
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 5 cut(s) 273, 296, 432, 458, 579
Tru9I TTAA 5 cut(s) 273, 296, 432, 458, 579
TscAI CASTG 1 cut(s) 540
TseFI GTSAC 2 cut(s) 389, 507
Tsp45I GTSAC 2 cut(s) 389, 507
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 540
XagI CCTNNNNNAGG 1 cut(s) 75
XapI RAATTY 1 cut(s) 345
XmnI GAANNNNTTC 1 cut(s) 38
ZraI GACGTC 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.