Rmu_sc0005581.1_g000006

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005581.1
Physical Location & Seq
Forward (+)
27547 .. 28188
642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005581.1_g000006.1.cds

Sequence Viewer

Length: 642 bp
atgcttgccacagcagaagccagcacaagtacatttcagtccatcaaagacggcgagaccatagtttcaaccgatggaacctttgagctcggattcttcactcctgcaggcgcgtctggtaatcgatacataggcatatggtacaagaagatatcggtaacaacggttgtgtgggttgccaaaagagaaacacccctcactgattcatcaggtattctcagaatcacttaccctggaattcttgtccttgtcaaccagaacaacaccacagtttggtcctccaacacatcaacaaccgcaccaaatgcagtggcacagcttttggattcaggaaaccttgttgtgaaagatggcagtgacaaagttgatccagagaatgagaagtacttgtggcaaagttttgactaccctggtgatacattgctagcaggtatgaagcttggaagaaacacagttacaggcttcaattggcatcttacatcatggagaagtccctctgatccttctcaaggcaacttcacatttcaacatggtcccagaggatatgcagaacaagttctgagggagggttcagacataagatttcggactggaccgtggaatggaatccgattcagtggaacactggaacgcctcatttag

Protein Analysis

213

Amino Acids

23.42

Weight (kDa)

6.12

Isoelectric Point (pI)

24.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27290 AT4G27290
fragaria_vesca FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g21310 FvH4_3g21310
malus_domestica MD05G1219900.v1.1 MD05G1220200.v1.1 MD05G1230800.v1.1 MD05G1231100.v1.1 MD05G1231700.v1.1 MD05G1232100.v1.1 MD05G1232400.v1.1 MD05G1233000.v1.1 MD10G1202800.v1.1
prunus_persica Prupe.4G139500_v2.0.a1 Prupe.4G139500_v2.0.a1
pyrus_communis pycom05g20170 pycom05g20200 pycom05g20230 pycom05g20250 pycom05g20260 pycom05g20280 pycom05g20320 pycom05g20370 pycom05g20380 pycom05g24850 pycom10g17340
rosa_chinensis RchiOBHm_Chr5g0026351 RchiOBHm_Chr5g0026371 RchiOBHm_Chr5g0026381 RchiOBHm_Chr5g0026411 RchiOBHm_Chr5g0026551 RchiOBHm_Chr5g0036371
rosa_laevigata RLG00000032923 RLG00000032926 RLG00000032927 RLG00000032928 RLG00000032934 RLG00000033692
rosa_multiflora Rmu_co8389779.1_g000001 Rmu_sc0000712.1_g000012 Rmu_sc0001017.1_g000026 Rmu_sc0001114.1_g000001 Rmu_sc0001114.1_g000002 Rmu_sc0001114.1_g000008 Rmu_sc0005581.1_g000006 Rmu_sc0005581.1_g000007 Rmu_sc0006059.1_g000052 Rmu_sc0042966.1_g000001
rosa_roxburghii Rroxscaffold_1G00044440 Rroxscaffold_1G00052930 Rroxscaffold_1G00052980 Rroxscaffold_1G00052990 Rroxscaffold_1G00053000
rosa_rugosa Rorug05G0092500 Rorug05G0092500 Rorug05G0092500 Rorug05G0092600 Rorug05G0092700 Rorug05G0092700 Rorug05G0093700 Rorug05G0155200 Rorug05G0155800 Rorug05G0155800
rosa_samantha Rh5AG185700 Rh5AG186300 Rh5BG182600 Rh5BG182900 Rh5BG183600 Rh5BG249400 Rh5CG202000 Rh5CG202100 Rh5CG202200 Rh5CG203400 Rh5CG281200 Rh5DG184400 Rh5DG184500 Rh5DG185900
rosa_wichuraiana Rw5G016850 Rw5G016870 Rw5G016930 Rw5G022870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 419
AccB7I CCANNNNNTGG 1 cut(s) 273
AccII CGCG 1 cut(s) 113
AciI CCGC 1 cut(s) 297
AclWI GGATC 2 cut(s) 362, 494
AcsI RAATTY 1 cut(s) 237
AfaI GTAC 3 cut(s) 31, 143, 386
AfiI CCNNNNNNNGG 3 cut(s) 273, 509, 602
AgsI TTSAA 3 cut(s) 69, 466, 527
AjnI CCWGG 2 cut(s) 232, 409
AluBI AGCT 3 cut(s) 88, 319, 439
AluI AGCT 3 cut(s) 88, 319, 439
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 1 cut(s) 50
AlwI GGATC 2 cut(s) 362, 494
ApoI RAATTY 1 cut(s) 237
Asp700I GAANNNNTTC 1 cut(s) 555
AspLEI GCGC 1 cut(s) 113
AspS9I GGNCC 3 cut(s) 276, 533, 593
AsuHPI GGTGA 1 cut(s) 425
AsuNHI GCTAGC 1 cut(s) 424
AvaII GGWCC 3 cut(s) 276, 533, 593
BanII GRGCYC 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 90
BccI CCATC 3 cut(s) 50, 68, 344
BceAI ACGGC 1 cut(s) 67
BciT130I CCWGG 2 cut(s) 234, 411
BcoDI GTCTC 1 cut(s) 50
BfaI CTAG 1 cut(s) 425
BfmI CTRYAG 1 cut(s) 105
BfuAI ACCTGC 1 cut(s) 419
BmcAI AGTACT 1 cut(s) 386
Bme1390I CCNGG 2 cut(s) 234, 411
Bme18I GGWCC 3 cut(s) 276, 533, 593
BmgT120I GGNCC 3 cut(s) 276, 533, 593
BmiI GGNNCC 2 cut(s) 79, 535
BmrFI CCNGG 2 cut(s) 234, 411
BmsI GCATC 1 cut(s) 481
BmtI GCTAGC 1 cut(s) 428
BpuEI CTTGAG 1 cut(s) 492
Bsa29I ATCGAT 1 cut(s) 124
BsaI GGTCTC 1 cut(s) 50
BsaJI CCNNGG 3 cut(s) 232, 409, 596
Bsc4I CCNNNNNNNGG 3 cut(s) 273, 509, 602
Bse1I ACTGG 2 cut(s) 595, 630
Bse3DI GCAATG 1 cut(s) 419
BseBI CCWGG 2 cut(s) 234, 411
BseCI ATCGAT 1 cut(s) 124
BseDI CCNNGG 3 cut(s) 232, 409, 596
BseLI CCNNNNNNNGG 3 cut(s) 273, 509, 602
BseMI GCAATG 1 cut(s) 419
BseMII CTCAG 2 cut(s) 232, 551
BseNI ACTGG 2 cut(s) 595, 630
Bsh1236I CGCG 1 cut(s) 113
BshVI ATCGAT 1 cut(s) 124
BsiHKAI GWGCWC 1 cut(s) 90
BslFI GGGAC 2 cut(s) 477, 519
BslI CCNNNNNNNGG 3 cut(s) 273, 509, 602
BsmAI GTCTC 1 cut(s) 50
BsmFI GGGAC 2 cut(s) 477, 519
Bso31I GGTCTC 1 cut(s) 50
Bsp1286I GDGCHC 1 cut(s) 90
Bsp143I GATC 2 cut(s) 367, 499
BspACI CCGC 1 cut(s) 297
BspCNI CTCAG 2 cut(s) 231, 552
BspDI ATCGAT 1 cut(s) 124
BspFNI CGCG 1 cut(s) 113
BspLI GGNNCC 2 cut(s) 79, 535
BspMAI CTGCAG 1 cut(s) 109
BspMI ACCTGC 1 cut(s) 419
BspOI GCTAGC 1 cut(s) 428
BspPI GGATC 2 cut(s) 362, 494
BspTNI GGTCTC 1 cut(s) 50
BsrDI GCAATG 1 cut(s) 419
BsrI ACTGG 2 cut(s) 595, 630
BssECI CCNNGG 3 cut(s) 232, 409, 596
BssMI GATC 2 cut(s) 367, 499
Bst2UI CCWGG 2 cut(s) 234, 411
Bst4CI ACNGT 4 cut(s) 166, 271, 454, 597
BstAPI GCANNNNNTGC 1 cut(s) 305
BstC8I GCNNGC 4 cut(s) 6, 22, 109, 426
BstDEI CTNAG 2 cut(s) 218, 560
BstDSI CCRYGG 1 cut(s) 596
BstENI CCTNNNNNAGG 1 cut(s) 507
BstFNI CGCG 1 cut(s) 113
BstHHI GCGC 1 cut(s) 113
BstKTI GATC 2 cut(s) 370, 502
BstMAI GTCTC 1 cut(s) 50
BstMBI GATC 2 cut(s) 367, 499
BstMWI GCNNNNNNNGC 1 cut(s) 305
BstNI CCWGG 2 cut(s) 234, 411
BstSCI CCNGG 2 cut(s) 232, 409
BstSFI CTRYAG 1 cut(s) 105
BstUI CGCG 1 cut(s) 113
Bsu15I ATCGAT 1 cut(s) 124
BsuTUI ATCGAT 1 cut(s) 124
BtgI CCRYGG 1 cut(s) 596
BtsI GCAGTG 2 cut(s) 315, 361
BtsIMutI CAGTG 5 cut(s) 198, 315, 361, 622, 623
BveI ACCTGC 1 cut(s) 419
Cac8I GCNNGC 4 cut(s) 6, 22, 109, 426
CfoI GCGC 1 cut(s) 113
Cfr13I GGNCC 3 cut(s) 276, 533, 593
ClaI ATCGAT 1 cut(s) 124
CseI GACGC 1 cut(s) 102
Csp6I GTAC 3 cut(s) 30, 142, 385
CspCI CAANNNNNGTGG 2 cut(s) 291, 326
CviAII CATG 2 cut(s) 483, 530
CviJI RGCY 5 cut(s) 20, 88, 319, 439, 462
CviKI_1 RGCY 5 cut(s) 20, 88, 319, 439, 462
CviQI GTAC 3 cut(s) 30, 142, 385
DdeI CTNAG 2 cut(s) 218, 560
DpnI GATC 2 cut(s) 369, 501
DpnII GATC 2 cut(s) 367, 499
Ecl136II GAGCTC 1 cut(s) 88
Eco24I GRGCYC 1 cut(s) 90
Eco31I GGTCTC 1 cut(s) 50
Eco32I GATATC 1 cut(s) 153
Eco47I GGWCC 3 cut(s) 276, 533, 593
Eco53kI GAGCTC 1 cut(s) 88
EcoICRI GAGCTC 1 cut(s) 88
EcoNI CCTNNNNNAGG 1 cut(s) 507
EcoRI GAATTC 1 cut(s) 237
EcoRII CCWGG 2 cut(s) 232, 409
EcoRV GATATC 1 cut(s) 153
EcoT38I GRGCYC 1 cut(s) 90
FaeI CATG 2 cut(s) 486, 533
FaiI YATR 9 cut(s) 62, 131, 137, 139, 434, 484, 531, 546, 578
FaqI GGGAC 2 cut(s) 477, 519
FatI CATG 2 cut(s) 482, 529
FauNDI CATATG 1 cut(s) 137
FriOI GRGCYC 1 cut(s) 90
FspBI CTAG 1 cut(s) 425
GlaI GCGC 1 cut(s) 112
HgaI GACGC 1 cut(s) 102
HhaI GCGC 1 cut(s) 113
Hin1II CATG 2 cut(s) 486, 533
Hin6I GCGC 1 cut(s) 111
HinP1I GCGC 1 cut(s) 111
HincII GTYRAC 1 cut(s) 253
HindII GTYRAC 1 cut(s) 253
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 6 cut(s) 93, 203, 222, 326, 606, 612
HphI GGTGA 1 cut(s) 425
Hpy166II GTNNAC 1 cut(s) 253
Hpy188I TCNGA 7 cut(s) 92, 221, 499, 561, 574, 588, 611
Hpy188III TCNNGA 2 cut(s) 330, 371
Hpy8I GTNNAC 1 cut(s) 253
HpyAV CCTTC 1 cut(s) 513
HpyCH4III ACNGT 4 cut(s) 166, 271, 454, 597
HpyCH4V TGCA 3 cut(s) 107, 308, 548
HpyF10VI GCNNNNNNNGC 1 cut(s) 305
HpyF3I CTNAG 2 cut(s) 218, 560
Hsp92II CATG 2 cut(s) 486, 533
HspAI GCGC 1 cut(s) 111
Kzo9I GATC 2 cut(s) 367, 499
LweI GCATC 1 cut(s) 481
MaeI CTAG 1 cut(s) 425
MaeIII GTNAC 3 cut(s) 157, 356, 454
MalI GATC 2 cut(s) 369, 501
MboI GATC 2 cut(s) 367, 499
MboII GAAGA 3 cut(s) 88, 160, 456
MfeI CAATTG 1 cut(s) 466
MhlI GDGCHC 1 cut(s) 90
MluCI AATT 2 cut(s) 237, 466
MmeI TCCRAC 1 cut(s) 306
MnlI CCTC 6 cut(s) 206, 289, 505, 533, 555, 559
MroXI GAANNNNTTC 1 cut(s) 555
MspR9I CCNGG 2 cut(s) 234, 411
MunI CAATTG 1 cut(s) 466
MvaI CCWGG 2 cut(s) 234, 411
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 1 cut(s) 305
NdeI CATATG 1 cut(s) 137
NdeII GATC 2 cut(s) 367, 499
NheI GCTAGC 1 cut(s) 424
NlaIII CATG 2 cut(s) 486, 533
NlaIV GGNNCC 2 cut(s) 79, 535
NmuCI GTSAC 1 cut(s) 356
PdmI GAANNNNTTC 1 cut(s) 555
PfeI GAWTC 6 cut(s) 93, 203, 222, 326, 606, 612
PflMI CCANNNNNTGG 1 cut(s) 273
Psp124BI GAGCTC 1 cut(s) 90
Psp6I CCWGG 2 cut(s) 232, 409
PspGI CCWGG 2 cut(s) 232, 409
PspN4I GGNNCC 2 cut(s) 79, 535
PspPI GGNCC 3 cut(s) 276, 533, 593
PstI CTGCAG 1 cut(s) 109
RsaI GTAC 3 cut(s) 31, 143, 386
RsaNI GTAC 3 cut(s) 30, 142, 385
SacI GAGCTC 1 cut(s) 90
Sau3AI GATC 2 cut(s) 367, 499
Sau96I GGNCC 3 cut(s) 276, 533, 593
SbfI CCTGCAGG 1 cut(s) 109
ScaI AGTACT 1 cut(s) 386
ScrFI CCNGG 2 cut(s) 234, 411
SdaI CCTGCAGG 1 cut(s) 109
SduI GDGCHC 1 cut(s) 90
SetI ASST 7 cut(s) 83, 90, 214, 321, 339, 433, 441
SfaNI GCATC 1 cut(s) 481
SfcI CTRYAG 1 cut(s) 105
SinI GGWCC 3 cut(s) 276, 533, 593
SmlI CTYRAG 1 cut(s) 507
SmoI CTYRAG 1 cut(s) 507
Sse8387I CCTGCAGG 1 cut(s) 109
Sse9I AATT 2 cut(s) 237, 466
SsiI CCGC 1 cut(s) 297
SspMI CTAG 1 cut(s) 425
SstI GAGCTC 1 cut(s) 90
StyD4I CCNGG 2 cut(s) 232, 409
TaaI ACNGT 4 cut(s) 166, 271, 454, 597
TaqI TCGA 1 cut(s) 124
TasI AATT 2 cut(s) 237, 466
TatI WGTACW 2 cut(s) 29, 384
TfiI GAWTC 6 cut(s) 93, 203, 222, 326, 606, 612
TscAI CASTG 5 cut(s) 205, 315, 361, 622, 630
TseFI GTSAC 1 cut(s) 356
Tsp45I GTSAC 1 cut(s) 356
TspDTI ATGAA 2 cut(s) 195, 449
TspRI CASTG 5 cut(s) 205, 315, 361, 622, 630
Van91I CCANNNNNTGG 1 cut(s) 273
VpaK11BI GGWCC 3 cut(s) 276, 533, 593
XagI CCTNNNNNAGG 1 cut(s) 507
XapI RAATTY 1 cut(s) 237
XmnI GAANNNNTTC 1 cut(s) 555
XspI CTAG 1 cut(s) 425
ZrmI AGTACT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.