pycom05g20260

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
23063187 .. 23064971
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g20260.3

Sequence Viewer

Length: 1059 bp
ATGGAGGAAATGGGTGCTTGCTGTGGTACGGGATCTGATCTAATTGATATAAGATACTTTCCTGAAAACGGGCAAGATATTTATATAAGAATGGCCGCAGCAGAACAAGATCATGAAGATGATACAAAGATCAACGCTAAATACTCTGAATCCAATGCAAAGAAAATGAGAATCATAATAAGCACTACTGTGTTGTCTACCGGACTGCTGGTCCTAGGCCTTGCCCTGCTGTTTTATGTTTGGAAGAAGCAGCACCAAAAAGGAAAACTGGGACGCAACCAAAAGGAGGATCTGGAATTACCGTTATTTGACTTGATGACAATAGTTTCTGCAACCAGTAACTTTTCAATTGAAAACAAACTTGGTGAAGGCGGTTTCGGATCTGTCTTCAAGGGTACGATGGAAGATGGACAAGAAATCGCAGTGAAAAGGCTTTCACAAAGTTCTAGACAAGGACTCGACGAGTTCAAGAATGAAGTTACACATATTGCCAAACTTCAGCACAGGAATCTAGTGAAGCTTCTTGGATGCTGCATTCAAGAAGACGAGATGATATTGATCTACGAGTTCATGCCTAACAAGAGCTTAGACTTCTTTATTTTCGATCAAAGAAGAAGGATGTTATTAGACTGGCCGAAGTGCTTTGAAATTATTAATGGGATAGCTCGAGGGCTGCTCTATCTTCATCAAGATTCTAGATTGAGAGTTATTCATAGAGATCTCAAAGCAAGTAACATTTTATTAAGCAGTGAATTTAACCCGAAAATCTCAGACTTTGGCCTGGCTAGAAGCTTTGGAGGAAGTGAAACGAAAGCAAAAACGAAGAAAGTGGTCGGAACGTACGGTTACATGTCCCCAGAATATGCAATTGATGGTTTCTACTCTATAAAGTCCGACGTCTATAGCTTTGGTGTTATGGTGCTAGAGATAGTGAGTGGGAGCAGAAATAGAGGATTCTCTCATCCAGACCACAATCTCAACCTTCTTGGACATGTGAGTGTGACAACATCAAATGTCAAGTTAAAAATTCTTATCGCTCGACTCTGCTACTTCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

353

Amino Acids

39.8

Weight (kDa)

8.06

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27290 AT4G27290
fragaria_vesca FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g21310 FvH4_3g21310
malus_domestica MD05G1219900.v1.1 MD05G1220200.v1.1 MD05G1230800.v1.1 MD05G1231100.v1.1 MD05G1231700.v1.1 MD05G1232100.v1.1 MD05G1232400.v1.1 MD05G1233000.v1.1 MD10G1202800.v1.1
prunus_persica Prupe.4G139500_v2.0.a1 Prupe.4G139500_v2.0.a1
pyrus_communis pycom05g20170 pycom05g20200 pycom05g20230 pycom05g20250 pycom05g20260 pycom05g20280 pycom05g20320 pycom05g20370 pycom05g20380 pycom05g24850 pycom10g17340
rosa_chinensis RchiOBHm_Chr5g0026351 RchiOBHm_Chr5g0026371 RchiOBHm_Chr5g0026381 RchiOBHm_Chr5g0026411 RchiOBHm_Chr5g0026551 RchiOBHm_Chr5g0036371
rosa_laevigata RLG00000032923 RLG00000032926 RLG00000032927 RLG00000032928 RLG00000032934 RLG00000033692
rosa_multiflora Rmu_co8389779.1_g000001 Rmu_sc0000712.1_g000012 Rmu_sc0001017.1_g000026 Rmu_sc0001114.1_g000001 Rmu_sc0001114.1_g000002 Rmu_sc0001114.1_g000008 Rmu_sc0005581.1_g000006 Rmu_sc0005581.1_g000007 Rmu_sc0006059.1_g000052 Rmu_sc0042966.1_g000001
rosa_roxburghii Rroxscaffold_1G00044440 Rroxscaffold_1G00052930 Rroxscaffold_1G00052980 Rroxscaffold_1G00052990 Rroxscaffold_1G00053000
rosa_rugosa Rorug05G0092500 Rorug05G0092500 Rorug05G0092500 Rorug05G0092600 Rorug05G0092700 Rorug05G0092700 Rorug05G0093700 Rorug05G0155200 Rorug05G0155800 Rorug05G0155800
rosa_samantha Rh5AG185700 Rh5AG186300 Rh5BG182600 Rh5BG182900 Rh5BG183600 Rh5BG249400 Rh5CG202000 Rh5CG202100 Rh5CG202200 Rh5CG203400 Rh5CG281200 Rh5DG184400 Rh5DG184500 Rh5DG185900
rosa_wichuraiana Rw5G016850 Rw5G016870 Rw5G016930 Rw5G022870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 900
AccI GTMKAC 1 cut(s) 197
AciI CCGC 2 cut(s) 96, 372
AclWI GGATC 3 cut(s) 40, 297, 388
AcoI YGGCCR 2 cut(s) 93, 632
AcsI RAATTY 2 cut(s) 752, 1026
AcuI CTGAAG 1 cut(s) 482
AcyI GRCGYC 1 cut(s) 897
AfaI GTAC 3 cut(s) 28, 397, 842
AfiI CCNNNNNNNGG 2 cut(s) 68, 286
AflIII ACRYGT 2 cut(s) 849, 991
AgsI TTSAA 6 cut(s) 348, 353, 391, 469, 539, 647
AhdI GACNNNNNGTC 1 cut(s) 209
AjnI CCWGG 1 cut(s) 780
AjuI GAANNNNNNNTTGG 2 cut(s) 345, 377
AleI CACNNNNGTG 1 cut(s) 188
AluBI AGCT 5 cut(s) 520, 585, 665, 792, 906
AluI AGCT 5 cut(s) 520, 585, 665, 792, 906
AlwI GGATC 3 cut(s) 40, 297, 388
Ama87I CYCGRG 1 cut(s) 666
AoxI GGCC 4 cut(s) 93, 217, 632, 778
ApeKI GCWGC 4 cut(s) 98, 250, 531, 673
ApoI RAATTY 2 cut(s) 752, 1026
AseI ATTAAT 1 cut(s) 654
AspA2I CCTAGG 1 cut(s) 214
AspS9I GGNCC 1 cut(s) 211
AsuHPI GGTGA 1 cut(s) 377
AvaI CYCGRG 1 cut(s) 666
AvaII GGWCC 1 cut(s) 211
AvrII CCTAGG 1 cut(s) 214
BbsI GAAGAC 2 cut(s) 379, 549
BbvI GCAGC 4 cut(s) 110, 262, 518, 660
BccI CCATC 3 cut(s) 394, 401, 866
BciT130I CCWGG 1 cut(s) 782
BfaI CTAG 6 cut(s) 215, 447, 512, 696, 786, 923
BfmI CTRYAG 1 cut(s) 901
BglII AGATCT 1 cut(s) 718
BisI GCNGC 5 cut(s) 96, 99, 251, 532, 674
BlnI CCTAGG 1 cut(s) 214
BlsI GCNGC 5 cut(s) 97, 100, 252, 533, 675
Bme1390I CCNGG 1 cut(s) 782
Bme18I GGWCC 1 cut(s) 211
BmeRI GACNNNNNGTC 1 cut(s) 209
BmeT110I CYCGRG 1 cut(s) 666
BmgT120I GGNCC 1 cut(s) 211
BmrFI CCNGG 1 cut(s) 782
BmrI ACTGGG 1 cut(s) 278
BmsI GCATC 1 cut(s) 518
BmuI ACTGGG 1 cut(s) 278
BpiI GAAGAC 2 cut(s) 379, 549
BplI GAGNNNNNCTC 2 cut(s) 660, 692
BsaBI GATNNNNATC 1 cut(s) 557
BsaHI GRCGYC 1 cut(s) 897
BsaJI CCNNGG 1 cut(s) 214
BsaWI WCCGGW 1 cut(s) 200
Bsc4I CCNNNNNNNGG 2 cut(s) 68, 286
Bse1I ACTGG 3 cut(s) 273, 336, 635
Bse8I GATNNNNATC 1 cut(s) 557
BseBI CCWGG 1 cut(s) 782
BseDI CCNNGG 1 cut(s) 214
BseGI GGATG 3 cut(s) 533, 624, 961
BseJI GATNNNNATC 1 cut(s) 557
BseLI CCNNNNNNNGG 2 cut(s) 68, 286
BseMII CTCAG 1 cut(s) 783
BseNI ACTGG 3 cut(s) 273, 336, 635
BseXI GCAGC 4 cut(s) 110, 262, 518, 660
BshFI GGCC 4 cut(s) 95, 219, 634, 780
BsiHKCI CYCGRG 1 cut(s) 666
BsiSI CCGG 1 cut(s) 201
BsiWI CGTACG 1 cut(s) 840
BslFI GGGAC 2 cut(s) 285, 838
BslI CCNNNNNNNGG 2 cut(s) 68, 286
BsmFI GGGAC 2 cut(s) 285, 838
BsmI GAATGC 1 cut(s) 534
BsnI GGCC 4 cut(s) 95, 219, 634, 780
BsoBI CYCGRG 1 cut(s) 666
Bsp143I GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
BspACI CCGC 2 cut(s) 96, 372
BspANI GGCC 4 cut(s) 95, 219, 634, 780
BspCNI CTCAG 1 cut(s) 782
BspHI TCATGA 1 cut(s) 112
BspPI GGATC 3 cut(s) 40, 297, 388
BsrI ACTGG 3 cut(s) 273, 336, 635
BssECI CCNNGG 1 cut(s) 214
BssMI GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
BssNI GRCGYC 1 cut(s) 897
BssT1I CCWWGG 1 cut(s) 214
Bst2UI CCWGG 1 cut(s) 782
Bst4CI ACNGT 3 cut(s) 190, 303, 845
BstACI GRCGYC 1 cut(s) 897
BstC8I GCNNGC 1 cut(s) 19
BstDEI CTNAG 2 cut(s) 586, 769
BstF5I GGATG 3 cut(s) 533, 624, 961
BstKTI GATC 9 cut(s) 35, 40, 112, 132, 292, 383, 561, 607, 721
BstMBI GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
BstMWI GCNNNNNNNGC 1 cut(s) 1053
BstNI CCWGG 1 cut(s) 782
BstNSI RCATGY 2 cut(s) 853, 995
BstSCI CCNGG 1 cut(s) 780
BstSFI CTRYAG 1 cut(s) 901
BstV1I GCAGC 4 cut(s) 110, 262, 518, 660
BstV2I GAAGAC 2 cut(s) 379, 549
BstX2I RGATCY 4 cut(s) 32, 289, 380, 718
BstYI RGATCY 4 cut(s) 32, 289, 380, 718
BsuRI GGCC 4 cut(s) 95, 219, 634, 780
BtsCI GGATG 3 cut(s) 533, 624, 961
BtsI GCAGTG 2 cut(s) 429, 754
BtsIMutI CAGTG 2 cut(s) 429, 754
Cac8I GCNNGC 1 cut(s) 19
CciI TCATGA 1 cut(s) 112
Cfr13I GGNCC 1 cut(s) 211
CseI GACGC 1 cut(s) 282
Csp6I GTAC 3 cut(s) 27, 396, 841
CviAII CATG 4 cut(s) 113, 571, 850, 992
CviQI GTAC 3 cut(s) 27, 396, 841
DdeI CTNAG 2 cut(s) 586, 769
DpnI GATC 9 cut(s) 34, 39, 111, 131, 291, 382, 560, 606, 720
DpnII GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
DriI GACNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 2 cut(s) 93, 632
Eam1105I GACNNNNNGTC 1 cut(s) 209
Eco130I CCWWGG 1 cut(s) 214
Eco147I AGGCCT 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 482
Eco88I CYCGRG 1 cut(s) 666
EcoRII CCWGG 1 cut(s) 780
EcoT14I CCWWGG 1 cut(s) 214
ErhI CCWWGG 1 cut(s) 214
FaeI CATG 4 cut(s) 116, 574, 853, 995
FaqI GGGAC 2 cut(s) 285, 838
FatI CATG 4 cut(s) 112, 570, 849, 991
FblI GTMKAC 1 cut(s) 197
Fnu4HI GCNGC 5 cut(s) 96, 99, 251, 532, 674
FokI GGATG 3 cut(s) 540, 631, 948
Fsp4HI GCNGC 5 cut(s) 96, 99, 251, 532, 674
FspBI CTAG 6 cut(s) 215, 447, 512, 696, 786, 923
GluI GCNGC 5 cut(s) 96, 99, 251, 532, 674
HaeIII GGCC 4 cut(s) 95, 219, 634, 780
HapII CCGG 1 cut(s) 201
HgaI GACGC 1 cut(s) 282
Hin1I GRCGYC 1 cut(s) 897
Hin1II CATG 4 cut(s) 116, 574, 853, 995
HindIII AAGCTT 2 cut(s) 518, 790
HinfI GANTC 7 cut(s) 149, 171, 456, 508, 692, 954, 1041
HpaII CCGG 1 cut(s) 201
HphI GGTGA 1 cut(s) 377
Hpy166II GTNNAC 1 cut(s) 198
Hpy188I TCNGA 6 cut(s) 37, 148, 380, 772, 836, 895
Hpy188III TCNNGA 9 cut(s) 62, 113, 293, 447, 469, 539, 689, 696, 965
Hpy8I GTNNAC 1 cut(s) 198
Hpy99I CGWCG 2 cut(s) 464, 899
HpyAV CCTTC 3 cut(s) 362, 609, 992
HpyCH4III ACNGT 3 cut(s) 190, 303, 845
HpyCH4IV ACGT 2 cut(s) 839, 897
HpyCH4V TGCA 4 cut(s) 158, 332, 534, 866
HpyF10VI GCNNNNNNNGC 1 cut(s) 1053
HpyF3I CTNAG 2 cut(s) 586, 769
HpySE526I ACGT 2 cut(s) 839, 897
Hsp92I GRCGYC 1 cut(s) 897
Hsp92II CATG 4 cut(s) 116, 574, 853, 995
Kzo9I GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
LmnI GCTCC 1 cut(s) 939
Lsp1109I GCAGC 4 cut(s) 110, 262, 518, 660
LweI GCATC 1 cut(s) 518
MaeI CTAG 6 cut(s) 215, 447, 512, 696, 786, 923
MaeII ACGT 2 cut(s) 839, 897
MaeIII GTNAC 5 cut(s) 338, 478, 731, 845, 1000
MalI GATC 9 cut(s) 34, 39, 111, 131, 291, 382, 560, 606, 720
MboI GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
MboII GAAGA 8 cut(s) 128, 256, 379, 416, 554, 624, 674, 835
MfeI CAATTG 2 cut(s) 348, 867
MflI RGATCY 4 cut(s) 32, 289, 380, 718
MluCI AATT 7 cut(s) 42, 296, 348, 648, 752, 867, 1026
MlyI GAGTC 2 cut(s) 450, 1035
MmeI TCCRAC 2 cut(s) 814, 918
MnlI CCTC 4 cut(s) 280, 662, 791, 944
MseI TTAA 4 cut(s) 654, 743, 756, 1022
MslI CAYNNNNRTG 3 cut(s) 117, 188, 996
MspI CCGG 1 cut(s) 201
MspR9I CCNGG 1 cut(s) 782
MunI CAATTG 2 cut(s) 348, 867
Mva1269I GAATGC 1 cut(s) 534
MvaI CCWGG 1 cut(s) 782
MwoI GCNNNNNNNGC 1 cut(s) 1053
NdeII GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
NlaIII CATG 4 cut(s) 116, 574, 853, 995
NmuCI GTSAC 1 cut(s) 1000
NspI RCATGY 2 cut(s) 853, 995
OliI CACNNNNGTG 1 cut(s) 188
PaeR7I CTCGAG 1 cut(s) 666
PagI TCATGA 1 cut(s) 112
PceI AGGCCT 1 cut(s) 219
PciI ACATGT 2 cut(s) 849, 991
PctI GAATGC 1 cut(s) 534
PfeI GAWTC 5 cut(s) 149, 171, 508, 692, 954
Pfl23II CGTACG 1 cut(s) 840
PkrI GCNGC 5 cut(s) 97, 100, 252, 533, 675
PleI GAGTC 2 cut(s) 450, 1035
PpsI GAGTC 2 cut(s) 450, 1035
PscI ACATGT 2 cut(s) 849, 991
PshBI ATTAAT 1 cut(s) 654
Psp6I CCWGG 1 cut(s) 780
PspGI CCWGG 1 cut(s) 780
PspLI CGTACG 1 cut(s) 840
PspPI GGNCC 1 cut(s) 211
PspXI VCTCGAGB 1 cut(s) 666
PsuI RGATCY 4 cut(s) 32, 289, 380, 718
RsaI GTAC 3 cut(s) 28, 397, 842
RsaNI GTAC 3 cut(s) 27, 396, 841
RseI CAYNNNNRTG 3 cut(s) 117, 188, 996
SaqAI TTAA 4 cut(s) 654, 743, 756, 1022
SatI GCNGC 5 cut(s) 96, 99, 251, 532, 674
Sau3AI GATC 9 cut(s) 32, 37, 109, 129, 289, 380, 558, 604, 718
Sau96I GGNCC 1 cut(s) 211
SchI GAGTC 2 cut(s) 450, 1035
ScrFI CCNGG 1 cut(s) 782
SetI ASST 8 cut(s) 522, 587, 667, 794, 842, 900, 908, 984
SfaNI GCATC 1 cut(s) 518
SfcI CTRYAG 1 cut(s) 901
Sfr274I CTCGAG 1 cut(s) 666
SinI GGWCC 1 cut(s) 211
SlaI CTCGAG 1 cut(s) 666
SmiMI CAYNNNNRTG 3 cut(s) 117, 188, 996
SmlI CTYRAG 1 cut(s) 666
SmoI CTYRAG 1 cut(s) 666
Sse9I AATT 7 cut(s) 42, 296, 348, 648, 752, 867, 1026
SseBI AGGCCT 1 cut(s) 219
SsiI CCGC 2 cut(s) 96, 372
SspMI CTAG 6 cut(s) 215, 447, 512, 696, 786, 923
StuI AGGCCT 1 cut(s) 219
StyD4I CCNGG 1 cut(s) 780
StyI CCWWGG 1 cut(s) 214
TaaI ACNGT 3 cut(s) 190, 303, 845
TaiI ACGT 2 cut(s) 842, 900
TaqI TCGA 4 cut(s) 459, 603, 667, 1039
TasI AATT 7 cut(s) 42, 296, 348, 648, 752, 867, 1026
TauI GCSGC 1 cut(s) 98
TfiI GAWTC 5 cut(s) 149, 171, 508, 692, 954
Tru1I TTAA 4 cut(s) 654, 743, 756, 1022
Tru9I TTAA 4 cut(s) 654, 743, 756, 1022
TscAI CASTG 2 cut(s) 429, 754
TseFI GTSAC 1 cut(s) 1000
TseI GCWGC 4 cut(s) 98, 250, 531, 673
Tsp45I GTSAC 1 cut(s) 1000
TspDTI ATGAA 5 cut(s) 129, 489, 559, 674, 701
TspRI CASTG 2 cut(s) 429, 754
VpaK11BI GGWCC 1 cut(s) 211
VspI ATTAAT 1 cut(s) 654
XapI RAATTY 2 cut(s) 752, 1026
XbaI TCTAGA 2 cut(s) 446, 695
XceI RCATGY 2 cut(s) 853, 995
XhoI CTCGAG 1 cut(s) 666
XmaJI CCTAGG 1 cut(s) 214
XmiI GTMKAC 1 cut(s) 197
XspI CTAG 6 cut(s) 215, 447, 512, 696, 786, 923
ZraI GACGTC 1 cut(s) 898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.