RLG00000032926

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000484
Physical Location & Seq
Forward (+)
20988013 .. 20991437
3425 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032926

Sequence Viewer

Length: 2196 bp
ATGAAAAATCCATTGAAGGTTAGGATGTGCTTACATCCTATTTGCTCTTTTCTGCTTATCATCACAGCGATATTTTCCACAGCAGGAGGCAGCACAAGTACATTTCAGTCCATTAGAGATGGCCAGACTATAGTTTCAACTACTGGAAACTTTGAGCTTGGATTTTTTAGTCCTTCTACTGGTTCTAATAATCGATATGTTGGGATATGGTACAAGAAGGTATCGTCTCCAATAGTATGGGTTGCCAACAGAGAAGCACCACTTACTGATTCATCAGGTGTTCTGCAGGTCACCAACCCTGGAATTCTTGTCCTCCTCAACCATAGCAAGAGCATAGTTTGGTCCTCAAACACATCAAGATCTGCAGAGAATCCAGTGGCCCAGCTTTTGGATTCAGGAAATCTTGTTGTGACAGATGGCAGTGATAGAGACCCTGAGAACTTCTTGTGGCAAAGTTTTGATTACCCAAGTGACACACTCCTACCAGGTATGAAGCTTGGTTGGAACAAAGTTACAGGCTTCAGTAGGCATCTTACATCATGGAACAGTCCACAGGATCCTTCTCTAGGAAAATATACATATGAACTTGATCGCAGAGGATATGGAGAAGAAATTTTGAAGAAGGAGTCAGTTACGATATGGCGAACCGGACCATGGAATGGAATCCGATTCAGTGGCTTGCCTCATTTAAGTCCAAACTCCATATTCACATACAATCTTGTCTTTGATGATCATGATGAAGAATATTATATTTTTGAGCTTCGTAACAGCTCACTTTATTCAAGATTGACTCTCAATCCAGCTTTAATTGATAACTGCGAAAGTTATGCATTCTGTGGTCCAAATGGTGCATGCAGTATTGACAGTTTCCCAGTATGTAGCTGCTTGAATGGATTTCAACCCAAATTTCCAAAGGACTGGGATGTAGTGGATTGGTCAAATGGCTGTGTGAGAAGGACTCCACTAAATTCAGTAAATTGCAGCGGTGACTTGTTTGAGAAGTACTCTGCAGTGAAATTGCCAGACACAGAGCAGTCCTGGTTCAACAGAAGTATGAATCTCAAGGAATGTGAGATGGCGTGCCTGAAGAACTGTTCCTGCACAGCTTATGCAAATTTGGATATCAGGGATGGAGGATCTGGCGGCTGCTTGCTGTGGTTTGGCAACCTAATTGATATTAGAAGTTTAACTGTAAATGGGCAAGATATTTATATAAGAATCGCTGCATCAGAACTAGGTACTCTAAATCATGACAACACCGTTATCAAAGCTAAAGACTCTGAATCTAAGAAGGGTATATTGCAAGATGGACAGGAAATAGCTGTGAAGAGGCTCTCGAAGCATTCTAAACAAGGACTGGATGAGTTCAAGAATGAGGTTACACATATTGTCAAACTTCAGCACAGGAATCTAGTGAAGCTTCTGGGATGCTGCATTCAGGGAGATGAAATGATGCTGATCTACGAATGCATGCCTAACAAAAGCTTGGACTTCTTTATTTTTGATCAAAGAAGAAGCTTCTTACTAAATTGGCCTAAGCGCTTTGACATTATTAATGGTATTGCTCGGGGGATCCTTTATCTTCATCAAGATTCTAGACTGAGAGTAATTCATAGAGATCTCAAAGCAGGCAATATCTTATTAGACAGTGAGTTCAACCCAAAAATCTCAGACTTTGGCCTGGCTAGAAGTTTTGGAGGAAATGAAACTAAAGCAGAAACGAATAAAGTGGTCGGGACATATGGTTACATGTCCCCAGAATATGCAATTGACGGGTTCTACTCGATAAAATCAGACGTGTATAGCTTTGGTGTTTTGATGCTGGAGATAATAAGTGGGAAGAGAAACAGAGGATTCCTTCATCCAGGCCACAACCTCAACCTGCTTGGACATGCATGGAACTTCCACACAGAAGGCAGGTCCATTGAATTGCTTGCTACATCAGCAGGGGACTCCATTAATCTACAAGAAGTTCTGCGAACGATTCATGTGGGTCTTTTATGTGTTCAGCAAAATCCACAAGACCGGCCAAGCATGTCAGCTGCAGTACTAATGTTAAGTGGCGAAGGTGTGCTGCCTGTACCTCAGAAACCTGGTTTTTATAATGAGAGGGCTCTAACTGAACTCCAAGTCCAGTCTTCTTCACAATCATGTTCAGTTAATACACTCACTTCCAGCCTATTCGTGCCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

732

Amino Acids

81.65

Weight (kDa)

6.61

Isoelectric Point (pI)

50.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 78 - 181 5.6e-40 D-mannose binding lectin
S_locus_glycop PF00954 214 - 267 3.3e-07 S-locus glycoprotein domain
S_locus_glycop PF00954 271 - 303 1.5e-06 S-locus glycoprotein domain
PAN_2 PF08276 327 - 393 9.5e-21 PAN-like domain
PK_Tyr_Ser-Thr PF07714 435 - 681 3.7e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 435 - 615 5.3e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27290 AT4G27290
fragaria_vesca FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g15690 FvH4_3g21310 FvH4_3g21310
malus_domestica MD05G1219900.v1.1 MD05G1220200.v1.1 MD05G1230800.v1.1 MD05G1231100.v1.1 MD05G1231700.v1.1 MD05G1232100.v1.1 MD05G1232400.v1.1 MD05G1233000.v1.1 MD10G1202800.v1.1
prunus_persica Prupe.4G139500_v2.0.a1 Prupe.4G139500_v2.0.a1
pyrus_communis pycom05g20170 pycom05g20200 pycom05g20230 pycom05g20250 pycom05g20260 pycom05g20280 pycom05g20320 pycom05g20370 pycom05g20380 pycom05g24850 pycom10g17340
rosa_chinensis RchiOBHm_Chr5g0026351 RchiOBHm_Chr5g0026371 RchiOBHm_Chr5g0026381 RchiOBHm_Chr5g0026411 RchiOBHm_Chr5g0026551 RchiOBHm_Chr5g0036371
rosa_laevigata RLG00000032923 RLG00000032926 RLG00000032927 RLG00000032928 RLG00000032934 RLG00000033692
rosa_multiflora Rmu_co8389779.1_g000001 Rmu_sc0000712.1_g000012 Rmu_sc0001017.1_g000026 Rmu_sc0001114.1_g000001 Rmu_sc0001114.1_g000002 Rmu_sc0001114.1_g000008 Rmu_sc0005581.1_g000006 Rmu_sc0005581.1_g000007 Rmu_sc0006059.1_g000052 Rmu_sc0042966.1_g000001
rosa_roxburghii Rroxscaffold_1G00044440 Rroxscaffold_1G00052930 Rroxscaffold_1G00052980 Rroxscaffold_1G00052990 Rroxscaffold_1G00053000
rosa_rugosa Rorug05G0092500 Rorug05G0092500 Rorug05G0092500 Rorug05G0092600 Rorug05G0092700 Rorug05G0092700 Rorug05G0093700 Rorug05G0155200 Rorug05G0155800 Rorug05G0155800
rosa_samantha Rh5AG185700 Rh5AG186300 Rh5BG182600 Rh5BG182900 Rh5BG183600 Rh5BG249400 Rh5CG202000 Rh5CG202100 Rh5CG202200 Rh5CG203400 Rh5CG281200 Rh5DG184400 Rh5DG184500 Rh5DG185900
rosa_wichuraiana Rw5G016850 Rw5G016870 Rw5G016930 Rw5G022870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2103
Acc36I ACCTGC 3 cut(s) 277, 1890, 1908
AccB7I CCANNNNNTGG 2 cut(s) 388, 659
AciI CCGC 2 cut(s) 984, 1143
AclWI GGATC 5 cut(s) 551, 564, 1144, 1567, 1580
AcoI YGGCCR 2 cut(s) 121, 2027
AcsI RAATTY 5 cut(s) 303, 612, 905, 967, 1114
AcuI CTGAAG 3 cut(s) 505, 1106, 1382
AfaI GTAC 6 cut(s) 100, 212, 1004, 1240, 2049, 2082
AfeI AGCGCT 1 cut(s) 1541
AfiI CCNNNNNNNGG 5 cut(s) 179, 388, 566, 654, 659
AflIII ACRYGT 2 cut(s) 1749, 1797
AjiI CACGTC 1 cut(s) 1798
AjnI CCWGG 6 cut(s) 298, 484, 1037, 1680, 1864, 2092
AloI GAACNNNNNNTCC 2 cut(s) 2115, 2147
Alw26I GTCTC 2 cut(s) 231, 423
AlwI GGATC 5 cut(s) 551, 564, 1144, 1567, 1580
Ama87I CYCGRG 1 cut(s) 1566
Aor51HI AGCGCT 1 cut(s) 1541
AoxI GGCC 6 cut(s) 121, 378, 1532, 1678, 1867, 2027
ApeKI GCWGC 8 cut(s) 90, 882, 981, 1146, 1223, 1431, 2042, 2074
ApoI RAATTY 5 cut(s) 303, 612, 905, 967, 1114
AseI ATTAAT 2 cut(s) 1554, 1959
AspLEI GCGC 1 cut(s) 1542
AspS9I GGNCC 5 cut(s) 342, 379, 650, 839, 1920
AsuHPI GGTGA 2 cut(s) 283, 998
AvaI CYCGRG 1 cut(s) 1566
AvaII GGWCC 4 cut(s) 342, 650, 839, 1920
BalI TGGCCA 1 cut(s) 123
BamHI GGATCC 2 cut(s) 556, 1572
BanII GRGCYC 1 cut(s) 2116
BbsI GAAGAC 1 cut(s) 2130
BbvI GCAGC 8 cut(s) 102, 869, 993, 1133, 1210, 1418, 2029, 2061
BccI CCATC 5 cut(s) 113, 410, 1069, 1124, 1301
BcgI CGANNNNNNTGC 2 cut(s) 809, 843
BciT130I CCWGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
BclI TGATCA 2 cut(s) 730, 1504
BcoDI GTCTC 2 cut(s) 231, 423
BfaI CTAG 5 cut(s) 566, 1235, 1412, 1596, 1686
BfmI CTRYAG 5 cut(s) 129, 284, 363, 1008, 2043
BfoI RGCGCY 1 cut(s) 1543
BfuAI ACCTGC 3 cut(s) 277, 1890, 1908
BglII AGATCT 2 cut(s) 359, 1618
BisI GCNGC 9 cut(s) 91, 883, 982, 1144, 1147, 1224, 1432, 2043, 2075
BlsI GCNGC 9 cut(s) 92, 884, 983, 1145, 1148, 1225, 1433, 2044, 2076
BmcAI AGTACT 2 cut(s) 1004, 2049
Bme1390I CCNGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
Bme18I GGWCC 4 cut(s) 342, 650, 839, 1920
BmeT110I CYCGRG 1 cut(s) 1566
BmgBI CACGTC 1 cut(s) 1798
BmgT120I GGNCC 5 cut(s) 342, 379, 650, 839, 1920
BmiI GGNNCC 2 cut(s) 558, 1574
BmrFI CCNGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
BmrI ACTGGG 2 cut(s) 866, 928
BmsI GCATC 5 cut(s) 538, 1235, 1418, 1443, 1809
BmuI ACTGGG 2 cut(s) 866, 928
BpiI GAAGAC 1 cut(s) 2130
BplI GAGNNNNNCTC 4 cut(s) 943, 975, 989, 1021
BpmI CTGGAG 1 cut(s) 1844
Bpu10I CCTNAGC 1 cut(s) 1536
BpuEI CTTGAG 1 cut(s) 1046
Bsa29I ATCGAT 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 1457
BsaI GGTCTC 1 cut(s) 423
BsaJI CCNNGG 2 cut(s) 298, 653
BsaWI WCCGGW 1 cut(s) 647
Bsc4I CCNNNNNNNGG 5 cut(s) 179, 388, 566, 654, 659
Bse118I RCCGGY 1 cut(s) 2025
Bse1I ACTGG 7 cut(s) 148, 184, 374, 872, 923, 1362, 2134
Bse8I GATNNNNATC 1 cut(s) 1457
BseBI CCWGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
BseCI ATCGAT 1 cut(s) 193
BseDI CCNNGG 2 cut(s) 298, 653
BseGI GGATG 7 cut(s) 30, 34, 928, 1135, 1366, 1433, 1861
BseJI GATNNNNATC 1 cut(s) 1457
BseLI CCNNNNNNNGG 5 cut(s) 179, 388, 566, 654, 659
BseMII CTCAG 4 cut(s) 426, 1592, 1683, 2099
BseNI ACTGG 7 cut(s) 148, 184, 374, 872, 923, 1362, 2134
BseRI GAGGAG 1 cut(s) 305
BseXI GCAGC 8 cut(s) 102, 869, 993, 1133, 1210, 1418, 2029, 2061
BseYI CCCAGC 1 cut(s) 381
BsgI GTGCAG 1 cut(s) 1084
BshFI GGCC 6 cut(s) 123, 380, 1534, 1680, 1869, 2029
BshVI ATCGAT 1 cut(s) 193
BsiHKCI CYCGRG 1 cut(s) 1566
BsiSI CCGG 2 cut(s) 648, 2026
BslFI GGGAC 3 cut(s) 1738, 1750, 1964
BslI CCNNNNNNNGG 5 cut(s) 179, 388, 566, 654, 659
BsmAI GTCTC 2 cut(s) 231, 423
BsmBI CGTCTC 1 cut(s) 231
BsmFI GGGAC 3 cut(s) 1738, 1750, 1964
BsmI GAATGC 4 cut(s) 830, 1342, 1434, 1472
BsnI GGCC 6 cut(s) 123, 380, 1534, 1680, 1869, 2029
Bso31I GGTCTC 1 cut(s) 423
BsoBI CYCGRG 1 cut(s) 1566
Bsp1286I GDGCHC 1 cut(s) 2116
Bsp143I GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
Bsp19I CCATGG 1 cut(s) 653
BspACI CCGC 2 cut(s) 984, 1143
BspANI GGCC 6 cut(s) 123, 380, 1534, 1680, 1869, 2029
BspCNI CTCAG 4 cut(s) 427, 1593, 1682, 2098
BspDI ATCGAT 1 cut(s) 193
BspHI TCATGA 2 cut(s) 733, 1249
BspLI GGNNCC 2 cut(s) 558, 1574
BspMAI CTGCAG 4 cut(s) 288, 367, 1012, 2047
BspMI ACCTGC 3 cut(s) 277, 1890, 1908
BspPI GGATC 5 cut(s) 551, 564, 1144, 1567, 1580
BspTNI GGTCTC 1 cut(s) 423
BsrFI RCCGGY 1 cut(s) 2025
BsrI ACTGG 7 cut(s) 148, 184, 374, 872, 923, 1362, 2134
BssAI RCCGGY 1 cut(s) 2025
BssECI CCNNGG 2 cut(s) 298, 653
BssMI GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
BssT1I CCWWGG 1 cut(s) 653
Bst2UI CCWGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
Bst4CI ACNGT 6 cut(s) 548, 866, 1094, 1192, 1261, 1649
Bst6I CTCTTC 2 cut(s) 1322, 1835
BstC8I GCNNGC 7 cut(s) 680, 853, 1081, 1151, 1472, 1630, 1935
BstDEI CTNAG 6 cut(s) 435, 1287, 1536, 1601, 1669, 2085
BstDSI CCRYGG 1 cut(s) 653
BstEII GGTNACC 1 cut(s) 289
BstENI CCTNNNNNAGG 1 cut(s) 564
BstF5I GGATG 7 cut(s) 30, 34, 928, 1135, 1366, 1433, 1861
BstH2I RGCGCY 1 cut(s) 1543
BstHHI GCGC 1 cut(s) 1542
BstKTI GATC 9 cut(s) 362, 559, 592, 733, 1139, 1461, 1507, 1575, 1621
BstMAI GTCTC 2 cut(s) 231, 423
BstMBI GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
BstMWI GCNNNNNNNGC 2 cut(s) 1339, 1943
BstNI CCWGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
BstNSI RCATGY 5 cut(s) 855, 1474, 1753, 1895, 2038
BstPI GGTNACC 1 cut(s) 289
BstSCI CCNGG 6 cut(s) 298, 484, 1037, 1680, 1864, 2092
BstSFI CTRYAG 5 cut(s) 129, 284, 363, 1008, 2043
BstV1I GCAGC 8 cut(s) 102, 869, 993, 1133, 1210, 1418, 2029, 2061
BstV2I GAAGAC 1 cut(s) 2130
BstX2I RGATCY 5 cut(s) 359, 556, 1136, 1572, 1618
BstXI CCANNNNNNTGG 2 cut(s) 237, 918
BstYI RGATCY 5 cut(s) 359, 556, 1136, 1572, 1618
Bsu15I ATCGAT 1 cut(s) 193
BsuRI GGCC 6 cut(s) 123, 380, 1534, 1680, 1869, 2029
BsuTUI ATCGAT 1 cut(s) 193
BtgI CCRYGG 1 cut(s) 653
BtrI CACGTC 1 cut(s) 1798
BtsCI GGATG 7 cut(s) 30, 34, 928, 1135, 1366, 1433, 1861
BtsI GCAGTG 2 cut(s) 427, 1017
BtsIMutI CAGTG 5 cut(s) 381, 427, 679, 1017, 1654
BveI ACCTGC 3 cut(s) 277, 1890, 1908
Cac8I GCNNGC 7 cut(s) 680, 853, 1081, 1151, 1472, 1630, 1935
CciI TCATGA 2 cut(s) 733, 1249
CfoI GCGC 1 cut(s) 1542
Cfr10I RCCGGY 1 cut(s) 2025
Cfr13I GGNCC 5 cut(s) 342, 379, 650, 839, 1920
ClaI ATCGAT 1 cut(s) 193
CsiI ACCWGGT 2 cut(s) 484, 2092
Csp6I GTAC 6 cut(s) 99, 211, 1003, 1239, 2048, 2081
CviQI GTAC 6 cut(s) 99, 211, 1003, 1239, 2048, 2081
DdeI CTNAG 6 cut(s) 435, 1287, 1536, 1601, 1669, 2085
DpnI GATC 9 cut(s) 361, 558, 591, 732, 1138, 1460, 1506, 1574, 1620
DpnII GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
EaeI YGGCCR 2 cut(s) 121, 2027
Eam1104I CTCTTC 2 cut(s) 1322, 1835
EarI CTCTTC 2 cut(s) 1322, 1835
Eco130I CCWWGG 1 cut(s) 653
Eco24I GRGCYC 1 cut(s) 2116
Eco31I GGTCTC 1 cut(s) 423
Eco32I GATATC 1 cut(s) 1123
Eco47I GGWCC 4 cut(s) 342, 650, 839, 1920
Eco47III AGCGCT 1 cut(s) 1541
Eco57I CTGAAG 3 cut(s) 505, 1106, 1382
Eco88I CYCGRG 1 cut(s) 1566
Eco91I GGTNACC 1 cut(s) 289
EcoNI CCTNNNNNAGG 1 cut(s) 564
EcoO65I GGTNACC 1 cut(s) 289
EcoRI GAATTC 1 cut(s) 303
EcoRII CCWGG 6 cut(s) 298, 484, 1037, 1680, 1864, 2092
EcoRV GATATC 1 cut(s) 1123
EcoT14I CCWWGG 1 cut(s) 653
EcoT22I ATGCAT 3 cut(s) 832, 1472, 1897
EcoT38I GRGCYC 1 cut(s) 2116
ErhI CCWWGG 1 cut(s) 653
Esp3I CGTCTC 1 cut(s) 231
FalI AAGNNNNNCTT 2 cut(s) 246, 278
FaqI GGGAC 3 cut(s) 1738, 1750, 1964
FauNDI CATATG 2 cut(s) 580, 1741
FbaI TGATCA 2 cut(s) 730, 1504
Fnu4HI GCNGC 9 cut(s) 91, 883, 982, 1144, 1147, 1224, 1432, 2043, 2075
FokI GGATG 7 cut(s) 21, 37, 935, 1142, 1373, 1440, 1848
FriOI GRGCYC 1 cut(s) 2116
Fsp4HI GCNGC 9 cut(s) 91, 883, 982, 1144, 1147, 1224, 1432, 2043, 2075
FspBI CTAG 5 cut(s) 566, 1235, 1412, 1596, 1686
GlaI GCGC 1 cut(s) 1541
GluI GCNGC 9 cut(s) 91, 883, 982, 1144, 1147, 1224, 1432, 2043, 2075
GsaI CCCAGC 1 cut(s) 385
GsuI CTGGAG 1 cut(s) 1844
HaeII RGCGCY 1 cut(s) 1543
HaeIII GGCC 6 cut(s) 123, 380, 1534, 1680, 1869, 2029
HapII CCGG 2 cut(s) 648, 2026
HhaI GCGC 1 cut(s) 1542
Hin6I GCGC 1 cut(s) 1540
HinP1I GCGC 1 cut(s) 1540
HindIII AAGCTT 4 cut(s) 494, 1418, 1483, 1516
HpaII CCGG 2 cut(s) 648, 2026
HphI GGTGA 2 cut(s) 283, 998
Hpy166II GTNNAC 1 cut(s) 551
Hpy188I TCNGA 6 cut(s) 668, 1231, 1282, 1672, 1795, 2088
Hpy8I GTNNAC 1 cut(s) 551
HpyCH4III ACNGT 6 cut(s) 548, 866, 1094, 1192, 1261, 1649
HpyCH4IV ACGT 1 cut(s) 1797
HpyF10VI GCNNNNNNNGC 2 cut(s) 1339, 1943
HpyF3I CTNAG 6 cut(s) 435, 1287, 1536, 1601, 1669, 2085
HpySE526I ACGT 1 cut(s) 1797
HspAI GCGC 1 cut(s) 1540
Ksp22I TGATCA 2 cut(s) 730, 1504
Kzo9I GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
Lsp1109I GCAGC 8 cut(s) 102, 869, 993, 1133, 1210, 1418, 2029, 2061
LweI GCATC 5 cut(s) 538, 1235, 1418, 1443, 1809
MabI ACCWGGT 2 cut(s) 484, 2092
MaeI CTAG 5 cut(s) 566, 1235, 1412, 1596, 1686
MaeII ACGT 1 cut(s) 1797
MaeIII GTNAC 9 cut(s) 289, 409, 470, 511, 631, 764, 986, 1378, 1745
MalI GATC 9 cut(s) 361, 558, 591, 732, 1138, 1460, 1506, 1574, 1620
MboI GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
MfeI CAATTG 1 cut(s) 1767
MflI RGATCY 5 cut(s) 359, 556, 1136, 1572, 1618
MhlI GDGCHC 1 cut(s) 2116
MlsI TGGCCA 1 cut(s) 123
MluNI TGGCCA 1 cut(s) 123
MlyI GAGTC 5 cut(s) 635, 784, 952, 1271, 1946
MmeI TCCRAC 1 cut(s) 482
Mox20I TGGCCA 1 cut(s) 123
Mph1103I ATGCAT 3 cut(s) 832, 1472, 1897
MscI TGGCCA 1 cut(s) 123
MseI TTAA 8 cut(s) 689, 806, 1187, 1554, 1959, 2057, 2160, 2194
MslI CAYNNNNRTG 1 cut(s) 2149
Msp20I TGGCCA 1 cut(s) 123
MspA1I CMGCKG 2 cut(s) 984, 2042
MspI CCGG 2 cut(s) 648, 2026
MspR9I CCNGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
MunI CAATTG 1 cut(s) 1767
Mva1269I GAATGC 4 cut(s) 830, 1342, 1434, 1472
MvaI CCWGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
MwoI GCNNNNNNNGC 2 cut(s) 1339, 1943
NcoI CCATGG 1 cut(s) 653
NdeI CATATG 2 cut(s) 580, 1741
NdeII GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
NlaIV GGNNCC 2 cut(s) 558, 1574
NmuCI GTSAC 4 cut(s) 289, 409, 470, 986
NsiI ATGCAT 3 cut(s) 832, 1472, 1897
NspI RCATGY 5 cut(s) 855, 1474, 1753, 1895, 2038
PaeI GCATGC 2 cut(s) 855, 1474
PagI TCATGA 2 cut(s) 733, 1249
PciI ACATGT 1 cut(s) 1749
PctI GAATGC 4 cut(s) 830, 1342, 1434, 1472
PflMI CCANNNNNTGG 2 cut(s) 388, 659
PkrI GCNGC 9 cut(s) 92, 884, 983, 1145, 1148, 1225, 1433, 2044, 2076
PleI GAGTC 5 cut(s) 634, 784, 952, 1271, 1946
PpsI GAGTC 5 cut(s) 634, 784, 952, 1271, 1946
PscI ACATGT 1 cut(s) 1749
PshBI ATTAAT 2 cut(s) 1554, 1959
PsiI TTATAA 1 cut(s) 2103
Psp6I CCWGG 6 cut(s) 298, 484, 1037, 1680, 1864, 2092
PspEI GGTNACC 1 cut(s) 289
PspFI CCCAGC 1 cut(s) 381
PspGI CCWGG 6 cut(s) 298, 484, 1037, 1680, 1864, 2092
PspN4I GGNNCC 2 cut(s) 558, 1574
PspPI GGNCC 5 cut(s) 342, 379, 650, 839, 1920
PstI CTGCAG 4 cut(s) 288, 367, 1012, 2047
PsuI RGATCY 5 cut(s) 359, 556, 1136, 1572, 1618
PvuII CAGCTG 1 cut(s) 2042
RsaI GTAC 6 cut(s) 100, 212, 1004, 1240, 2049, 2082
RsaNI GTAC 6 cut(s) 99, 211, 1003, 1239, 2048, 2081
RseI CAYNNNNRTG 1 cut(s) 2149
SaqAI TTAA 8 cut(s) 689, 806, 1187, 1554, 1959, 2057, 2160, 2194
SatI GCNGC 9 cut(s) 91, 883, 982, 1144, 1147, 1224, 1432, 2043, 2075
Sau3AI GATC 9 cut(s) 359, 556, 589, 730, 1136, 1458, 1504, 1572, 1618
Sau96I GGNCC 5 cut(s) 342, 379, 650, 839, 1920
ScaI AGTACT 2 cut(s) 1004, 2049
SchI GAGTC 5 cut(s) 635, 784, 952, 1271, 1946
ScrFI CCNGG 6 cut(s) 300, 486, 1039, 1682, 1866, 2094
SduI GDGCHC 1 cut(s) 2116
SexAI ACCWGGT 2 cut(s) 484, 2092
SfaNI GCATC 5 cut(s) 538, 1235, 1418, 1443, 1809
SfcI CTRYAG 5 cut(s) 129, 284, 363, 1008, 2043
SinI GGWCC 4 cut(s) 342, 650, 839, 1920
SmiMI CAYNNNNRTG 1 cut(s) 2149
SmlI CTYRAG 1 cut(s) 1061
SmoI CTYRAG 1 cut(s) 1061
SphI GCATGC 2 cut(s) 855, 1474
SsiI CCGC 2 cut(s) 984, 1143
SspI AATATT 1 cut(s) 746
SspMI CTAG 5 cut(s) 566, 1235, 1412, 1596, 1686
StyD4I CCNGG 6 cut(s) 298, 484, 1037, 1680, 1864, 2092
StyI CCWWGG 1 cut(s) 653
TaaI ACNGT 6 cut(s) 548, 866, 1094, 1192, 1261, 1649
TaiI ACGT 1 cut(s) 1800
TaqI TCGA 3 cut(s) 193, 1337, 1784
TatI WGTACW 3 cut(s) 98, 1002, 2047
TauI GCSGC 1 cut(s) 1146
Tru1I TTAA 8 cut(s) 689, 806, 1187, 1554, 1959, 2057, 2160, 2194
Tru9I TTAA 8 cut(s) 689, 806, 1187, 1554, 1959, 2057, 2160, 2194
TscAI CASTG 5 cut(s) 381, 427, 679, 1017, 1654
TseFI GTSAC 4 cut(s) 289, 409, 470, 986
TseI GCWGC 8 cut(s) 90, 882, 981, 1146, 1223, 1431, 2042, 2074
Tsp45I GTSAC 4 cut(s) 289, 409, 470, 986
TspRI CASTG 5 cut(s) 381, 427, 679, 1017, 1654
Van91I CCANNNNNTGG 2 cut(s) 388, 659
VpaK11BI GGWCC 4 cut(s) 342, 650, 839, 1920
VspI ATTAAT 2 cut(s) 1554, 1959
XagI CCTNNNNNAGG 1 cut(s) 564
XapI RAATTY 5 cut(s) 303, 612, 905, 967, 1114
XbaI TCTAGA 1 cut(s) 1595
XceI RCATGY 5 cut(s) 855, 1474, 1753, 1895, 2038
XspI CTAG 5 cut(s) 566, 1235, 1412, 1596, 1686
ZrmI AGTACT 2 cut(s) 1004, 2049
Zsp2I ATGCAT 3 cut(s) 832, 1472, 1897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.