Prupe.1G045800_v2.0.a1

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000555
Physical Location & Seq
Forward (+)
3260912 .. 3270754
9843 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G045800.1

Sequence Viewer

Length: 2601 bp
ATGAGAGTGGCAGTGATTGGTGCTGGGATTAGTGGTTTGGTTTCAGCTTATGTTCTTGCAAAAGAAGGGGCGGAGGTGGTGTTGTTTGAGAAGGATGACTACTTGGGCGGCCATGCCAGGACTGTCACATTTGATGGTGTTGATTTGGACCTTGGCTTTATGGTCTTCAATCGTGTAACCTATCCAAATATGATGGAGTTGTTTGAGAGACTTGGAGTTGATATGGAGACATCTGATATGTCCTTCTCAGCGAGCTTAGACAAAGGGCAAGGCTGTGAATGGGGCAGTCGAAATGGCTTGTCAAGCTTGTTTGCACAAAAGAGGAACTTGTTCAATCCATACTTTTGGCAAATGCTTCGAGAAATCACCAAGTTTAAACATGATGCAATCAATTACCTTGAGGAGCTCGAGAACAACCCAGACATTGATCGCAATGAAACCTTGGGGCAGTTTATCAAGTCACGAGGCTACTCTGAATTATTTCAGAAGGCTTATCTTGTTCCAGTATGTGGTTCAATCTGGTCTTGCCCTTCAGAAGGGGTTATGAGCTTCTCAGCCTTCTCTGTTCTCTCATTTTGTCGAAACCATCATTTACTTCAGCTATTTGGCCGCCCACAGTGGCTTACTGTCAGATGGCGTTCACATTGTTATGTCAAGAAGGTCAGACAAGTGCTGGAAAGTAAAGGGTGTCAGATAAGAACTAGCTCTGAGGTACATAGGGTTTCCACAACCGATGAGGGTTGCAGTGTACTCTCTGGTGATGGTTTGGAGGAAATATATGATCGCTGCGTAATGGCTGTCCACGCCCCAGACGCTGTGAGAATACTAGGAGACCAGGCAACATCAGATGAGTTGAGAGTACTCGGTGCTTTCCAATATGTATACAGTGATATTTTCCTGCATCGTGACAAAACTTTAATGCCCCAAAACCCAGCAGCATGGAGTGCATGGAATTTTCTCGGAAGTAATGGCAACAAAGTATGCTTGACATACTGGCTCAATGTGCTTCAGAACATTGATGAAAAAGGTCTACCATTTCTTGTGACTCTCAACCCAGATCATACACCAGAACATACCTTGCTTAAGTGGTCAACAAGCCATCCAGTCCCATCTGTTGCTGCGTCGAAAGCTTCCGTGGAGCTTCATCGCATTCAAGGAAAGAGAGGAATTTGGTTTTGTGGAGCATACCAAGGTTATGGCTTCCATGAGGATGGACTAAAGGCTGGAATGGCTGCAGCACACGGTATGCTTGGAAAAGGATGTTCCCTCTTGAGCAACCCAAAACACATGGTTCCATCACTGACAGAAACAGGGGCACGCCTTTTTGTTACTAGGTTTCTTAGACATTATATATCTACTGGATGTTTAATTTTATTAGAGGAAGGAGGTACAATTTTCAACTTTGAGGGAACCAGAAAAGGGTGTTCTCTAAAATGTGTTCTTAGAGTTCATACTCCTCAGTTTTACTGGAAGGTAATGACACAGGCTGATTTAGGCCTTGCAGATGCATATATCAACAGGGATTTTTCTTTCATTGATAAAGACAAGGGCCTTCTAAATCTTTTTATGATTCTCATTGCCAACAGAGATTCAAATTCTTCTGACTCAAAATTGAACAAGAAAAGGGGATGGTGGACGCCATTGTTATTCACAGCTAGTATAGCCTCAGCAAAGTACTTCTTTCAGCATGTTTCAAGACAAAATACTCTCACACAGGCACGCAGGAACATCTCTCGTCATTATGACCTGAGTAATGATCTATTTTCTCTGTTCTTGGATGAAACAATGACATATTCCAGTGCTGTATTTAAGACTGAAGATGAAGATTTAAAGACTGCACAGCTAAGGAAAATCTCTCTTTTCATTGAAAAGTCTAGAATTGAGAAGAACCATGAAGTTCTAGAGATCGGATGCGGTTGGGGAAGCTTAGCTATTGAAGTTGTCAAACAAACTGGTTGTAAATACACTGGCATCACTCTGTCTGAGGAACAACTCAAATATGCACAAAAGAAAGTGAAAGATGCTGGCCTTCAGGACCGCATCAGATTTCTTCTGTGCGACTATAGGCAACTTCCCAACTACAAATACGACAGAATTATATCTTGCGAGATGCTCGAAAGTGTGGGGCATGAATTTATGGACGAATTTTTTGCTTGCTGTGAATCTGTGCTAGCAGATAATGGCCTTCTTGTTTTACAGTTCATATCAATACCGGATGAACGTTACGATGAGTACAGACGAAGTTCAGATTTCATAAAGGAATATATTTTTCCTGGTGGATGTCTACCTTCGTTAAGTAGGGTAACATCAGCAATGGCTGCTTCTTCCAGACTCTGTGTGGAGCACTTGGAAAACATTGGAATCCATTACTACCAGACATTGAGATGTTGGAGAAAAAATTTCTTGGAGAGACATAGTGAAATACTGGCTCTTGGGTTCAATGAGAATTTCATCCGGACATGGGAATATTATTTTGATTACTGTGCTGCTGGTTTTAAGACATATACGCTTGGAAATTACCAGATCGTGTTTTCGCGTCCCGGCAACACTCCGGCCTTCGCCGATCCATACAAAGGCTTCCCTTCAGCTTCAGCATGTTGA

Protein Analysis

867

Amino Acids

98.45

Weight (kDa)

6.92

Isoelectric Point (pI)

36.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000555)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23470 AT3G23470 AT3G23470 AT3G23480 AT3G23480 AT3G23480 AT3G23510 AT3G23530
fragaria_vesca FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_7g18110 FvH4_7g18140 FvH4_7g18480 FvH4_7g18481
malus_domestica MD16G1224400.v1.1
prunus_persica Prupe.1G045800_v2.0.a1
pyrus_communis pycom16g18780
rosa_chinensis RchiOBHm_Chr1g0325031 RchiOBHm_Chr1g0362281 RchiOBHm_Chr4g0394761 RchiOBHm_Chr4g0394801 RchiOBHm_Chr4g0394871 RchiOBHm_Chr4g0394921 RchiOBHm_Chr4g0394931 RchiOBHm_Chr4g0394941 RchiOBHm_Chr6g0273911
rosa_laevigata RLG00000009657 RLG00000009659 RLG00000009665 RLG00000013591 RLG00000027657
rosa_multiflora Rmu_sc0005356.1_g000006 Rmu_sc0005802.1_g000020 Rmu_sc0007125.1_g000012 Rmu_ssc0000009.1_g000024
rosa_roxburghii Rroxscaffold_5G00339800 Rroxscaffold_5G00339890 Rroxscaffold_7G00194930
rosa_rugosa Rorug01G0197800 Rorug01G0297000 Rorug01G0297100 Rorug03G0360900.1 Rorug03G0361000.1 Rorug03G0361200.1 Rorug03G0361700.1 Rorug03G0361800.1 Rorug03G0361900.1 Rorug04G0078200
rosa_samantha Rh1AG090300 Rh1AG305900 Rh1DG071500 Rh1DG299200 Rh1DG299300 Rh1DG299400 Rh4AG054900 Rh4BG052700 Rh4CG059500 Rh4CG060100 Rh4CG060200 Rh4DG051300 Rh4DG051800 Rh5BG441600 Rh6AG193200 Rh6CG196400
rosa_wichuraiana Rw1G027140 Rw4G003970 Rw4G004380 Rw4G004420 Rw4G004440 Rw6G016840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 509
AccI GTMKAC 3 cut(s) 882, 1030, 2284
AccII CGCG 1 cut(s) 2536
AccIII TCCGGA 1 cut(s) 2454
AciI CCGC 5 cut(s) 71, 108, 610, 1914, 2038
AclI AACGTT 1 cut(s) 2221
AclWI GGATC 1 cut(s) 2558
AcoI YGGCCR 2 cut(s) 109, 607
AcsI RAATTY 7 cut(s) 952, 1167, 1594, 2132, 2144, 2398, 2446
AcuI CTGAAG 7 cut(s) 516, 581, 992, 1836, 2015, 2568, 2574
AcyI GRCGYC 1 cut(s) 1637
AfaI GTAC 6 cut(s) 714, 750, 861, 1390, 1676, 2234
AfiI CCNNNNNNNGG 5 cut(s) 509, 536, 1419, 2461, 2573
AflII CTTAAG 1 cut(s) 1082
AjnI CCWGG 3 cut(s) 116, 834, 2272
Alw21I GWGCWC 2 cut(s) 408, 2346
Alw26I GTCTC 4 cut(s) 202, 221, 825, 2404
AlwI GGATC 1 cut(s) 2558
AlwNI CAGNNNCTG 2 cut(s) 815, 2334
Ama87I CYCGRG 1 cut(s) 407
Aor13HI TCCGGA 1 cut(s) 2454
AoxI GGCC 7 cut(s) 109, 607, 1495, 1549, 2026, 2182, 2553
ApeKI GCWGC 7 cut(s) 786, 935, 1118, 1232, 1235, 2318, 2486
ApoI RAATTY 7 cut(s) 952, 1167, 1594, 2132, 2144, 2398, 2446
ArsI GACNNNNNNTTYG 2 cut(s) 2132, 2164
Asp700I GAANNNNTTC 2 cut(s) 329, 480
AspS9I GGNCC 3 cut(s) 148, 1549, 2035
AsuC2I CCSGG 1 cut(s) 2541
AsuHPI GGTGA 2 cut(s) 358, 770
AsuNHI GCTAGC 1 cut(s) 2170
AvaI CYCGRG 1 cut(s) 407
AvaII GGWCC 2 cut(s) 148, 2035
BaeGI GKGCMC 1 cut(s) 1318
BanII GRGCYC 1 cut(s) 408
BarI GAAGNNNNNNTAC 2 cut(s) 83, 115
BauI CACGAG 1 cut(s) 462
BbsI GAAGAC 1 cut(s) 157
Bbv12I GWGCWC 2 cut(s) 408, 2346
BbvCI CCTCAGC 1 cut(s) 1666
BbvI GCAGC 7 cut(s) 773, 947, 1105, 1219, 1247, 2305, 2473
BcgI CGANNNNNNTGC 4 cut(s) 338, 372, 2132, 2166
BciT130I CCWGG 3 cut(s) 118, 836, 2274
BcnI CCSGG 1 cut(s) 2541
BcoDI GTCTC 4 cut(s) 202, 221, 825, 2404
BfaI CTAG 7 cut(s) 702, 827, 1332, 1656, 1875, 1901, 2171
BfmI CTRYAG 2 cut(s) 1233, 2062
BfrI CTTAAG 1 cut(s) 1082
BisI GCNGC 9 cut(s) 109, 610, 787, 936, 1119, 1233, 1236, 2319, 2487
BlpI GCTNAGC 1 cut(s) 1927
BlsI GCNGC 9 cut(s) 110, 611, 788, 937, 1120, 1234, 1237, 2320, 2488
BmcAI AGTACT 2 cut(s) 861, 1676
Bme1390I CCNGG 4 cut(s) 118, 836, 2274, 2541
Bme18I GGWCC 2 cut(s) 148, 2035
BmeT110I CYCGRG 1 cut(s) 407
BmgT120I GGNCC 3 cut(s) 148, 1549, 2035
BmiI GGNNCC 2 cut(s) 1293, 1411
BmrFI CCNGG 4 cut(s) 118, 836, 2274, 2541
BmsI GCATC 8 cut(s) 373, 910, 1495, 1901, 1980, 2011, 2049, 2100
BmtI GCTAGC 1 cut(s) 2174
BpiI GAAGAC 1 cut(s) 157
Bpu10I CCTNAGC 2 cut(s) 1666, 1844
Bpu1102I GCTNAGC 1 cut(s) 1927
BpuEI CTTGAG 2 cut(s) 419, 1291
BpuMI CCSGG 1 cut(s) 2541
BsaHI GRCGYC 1 cut(s) 1637
BsaI GGTCTC 1 cut(s) 825
BsaJI CCNNGG 4 cut(s) 151, 441, 1134, 1189
BsaWI WCCGGW 2 cut(s) 2212, 2454
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 5 cut(s) 509, 536, 1419, 2461, 2573
Bse1I ACTGG 9 cut(s) 503, 998, 1103, 1363, 1472, 1797, 1957, 1972, 2430
Bse3DI GCAATG 3 cut(s) 439, 1575, 2319
BseAI TCCGGA 1 cut(s) 2454
BseBI CCWGG 3 cut(s) 118, 836, 2274
BseDI CCNNGG 4 cut(s) 151, 441, 1134, 1189
BseLI CCNNNNNNNGG 5 cut(s) 509, 536, 1419, 2461, 2573
BseMI GCAATG 3 cut(s) 439, 1575, 2319
BseMII CTCAG 7 cut(s) 261, 567, 699, 1472, 1680, 1739, 1974
BseNI ACTGG 9 cut(s) 503, 998, 1103, 1363, 1472, 1797, 1957, 1972, 2430
BseRI GAGGAG 2 cut(s) 416, 1446
BseSI GKGCMC 1 cut(s) 1318
BseXI GCAGC 7 cut(s) 773, 947, 1105, 1219, 1247, 2305, 2473
BseYI CCCAGC 2 cut(s) 23, 931
BsgI GTGCAG 1 cut(s) 1821
Bsh1236I CGCG 1 cut(s) 2536
BshFI GGCC 7 cut(s) 111, 609, 1497, 1551, 2028, 2184, 2555
BsiHKAI GWGCWC 2 cut(s) 408, 2346
BsiHKCI CYCGRG 1 cut(s) 407
BsiSI CCGG 4 cut(s) 2213, 2455, 2541, 2552
BslFI GGGAC 2 cut(s) 1091, 2523
BslI CCNNNNNNNGG 5 cut(s) 509, 536, 1419, 2461, 2573
BsmAI GTCTC 4 cut(s) 202, 221, 825, 2404
BsmFI GGGAC 2 cut(s) 1091, 2523
BsmI GAATGC 1 cut(s) 1149
BsnI GGCC 7 cut(s) 111, 609, 1497, 1551, 2028, 2184, 2555
Bso31I GGTCTC 1 cut(s) 825
BsoBI CYCGRG 1 cut(s) 407
Bsp1286I GDGCHC 3 cut(s) 408, 1318, 2346
Bsp13I TCCGGA 1 cut(s) 2454
Bsp143I GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
Bsp1720I GCTNAGC 1 cut(s) 1927
BspACI CCGC 5 cut(s) 71, 108, 610, 1914, 2038
BspANI GGCC 7 cut(s) 111, 609, 1497, 1551, 2028, 2184, 2555
BspCNI CTCAG 7 cut(s) 260, 566, 700, 1471, 1679, 1740, 1975
BspEI TCCGGA 1 cut(s) 2454
BspFNI CGCG 1 cut(s) 2536
BspLI GGNNCC 2 cut(s) 1293, 1411
BspMAI CTGCAG 1 cut(s) 1237
BspOI GCTAGC 1 cut(s) 2174
BspPI GGATC 1 cut(s) 2558
BspTI CTTAAG 1 cut(s) 1082
BspTNI GGTCTC 1 cut(s) 825
BsrDI GCAATG 3 cut(s) 439, 1575, 2319
BsrI ACTGG 9 cut(s) 503, 998, 1103, 1363, 1472, 1797, 1957, 1972, 2430
BssECI CCNNGG 4 cut(s) 151, 441, 1134, 1189
BssMI GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
BssNAI GTATAC 1 cut(s) 883
BssNI GRCGYC 1 cut(s) 1637
BssSI CACGAG 1 cut(s) 462
BssT1I CCWWGG 3 cut(s) 151, 441, 1189
Bst1107I GTATAC 1 cut(s) 883
Bst2BI CACGAG 1 cut(s) 462
Bst2UI CCWGG 3 cut(s) 118, 836, 2274
Bst4CI ACNGT 7 cut(s) 124, 618, 628, 887, 1244, 2199, 2483
BstACI GRCGYC 1 cut(s) 1637
BstAFI CTTAAG 1 cut(s) 1082
BstAPI GCANNNNNTGC 2 cut(s) 944, 2318
BstC8I GCNNGC 6 cut(s) 253, 1318, 1720, 2026, 2155, 2172
BstDSI CCRYGG 1 cut(s) 1134
BstENI CCTNNNNNAGG 1 cut(s) 534
BstFNI CGCG 1 cut(s) 2536
BstKTI GATC 7 cut(s) 430, 784, 1060, 1759, 1908, 2526, 2566
BstMAI GTCTC 4 cut(s) 202, 221, 825, 2404
BstMBI GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
BstMWI GCNNNNNNNGC 9 cut(s) 303, 803, 812, 944, 1003, 1127, 1229, 1661, 2318
BstNI CCWGG 3 cut(s) 118, 836, 2274
BstNSI RCATGY 2 cut(s) 1691, 2598
BstSCI CCNGG 4 cut(s) 116, 834, 2272, 2539
BstSFI CTRYAG 2 cut(s) 1233, 2062
BstSLI GKGCMC 1 cut(s) 1318
BstUI CGCG 1 cut(s) 2536
BstV1I GCAGC 7 cut(s) 773, 947, 1105, 1219, 1247, 2305, 2473
BstV2I GAAGAC 1 cut(s) 157
BstXI CCANNNNNNTGG 4 cut(s) 345, 939, 1196, 1211
BstZ17I GTATAC 1 cut(s) 883
BsuRI GGCC 7 cut(s) 111, 609, 1497, 1551, 2028, 2184, 2555
BtgI CCRYGG 1 cut(s) 1134
BtgZI GCGATG 1 cut(s) 1130
BtsI GCAGTG 2 cut(s) 18, 751
BtsIMutI CAGTG 7 cut(s) 18, 623, 751, 892, 1298, 1804, 1965
Cac8I GCNNGC 6 cut(s) 253, 1318, 1720, 2026, 2155, 2172
CaiI CAGNNNCTG 2 cut(s) 815, 2334
Cfr13I GGNCC 3 cut(s) 148, 1549, 2035
CseI GACGC 4 cut(s) 821, 1110, 1645, 2525
Csp6I GTAC 6 cut(s) 713, 749, 860, 1389, 1675, 2233
CviQI GTAC 6 cut(s) 713, 749, 860, 1389, 1675, 2233
DpnI GATC 7 cut(s) 429, 783, 1059, 1758, 1907, 2525, 2565
DpnII GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
DraI TTTAAA 2 cut(s) 376, 1830
EaeI YGGCCR 2 cut(s) 109, 607
EciI GGCGGA 1 cut(s) 86
Ecl136II GAGCTC 1 cut(s) 406
Eco130I CCWWGG 3 cut(s) 151, 441, 1189
Eco147I AGGCCT 1 cut(s) 1497
Eco24I GRGCYC 1 cut(s) 408
Eco31I GGTCTC 1 cut(s) 825
Eco47I GGWCC 2 cut(s) 148, 2035
Eco53kI GAGCTC 1 cut(s) 406
Eco57I CTGAAG 7 cut(s) 516, 581, 992, 1836, 2015, 2568, 2574
Eco88I CYCGRG 1 cut(s) 407
EcoICRI GAGCTC 1 cut(s) 406
EcoNI CCTNNNNNAGG 1 cut(s) 534
EcoO109I RGGNCCY 1 cut(s) 1549
EcoRII CCWGG 3 cut(s) 116, 834, 2272
EcoT14I CCWWGG 3 cut(s) 151, 441, 1189
EcoT22I ATGCAT 1 cut(s) 1510
EcoT38I GRGCYC 1 cut(s) 408
ErhI CCWWGG 3 cut(s) 151, 441, 1189
FalI AAGNNNNNCTT 4 cut(s) 311, 343, 1664, 1696
FaqI GGGAC 2 cut(s) 1091, 2523
FblI GTMKAC 3 cut(s) 882, 1030, 2284
Fnu4HI GCNGC 9 cut(s) 109, 610, 787, 936, 1119, 1233, 1236, 2319, 2487
FriOI GRGCYC 1 cut(s) 408
Fsp4HI GCNGC 9 cut(s) 109, 610, 787, 936, 1119, 1233, 1236, 2319, 2487
FspBI CTAG 7 cut(s) 702, 827, 1332, 1656, 1875, 1901, 2171
GluI GCNGC 9 cut(s) 109, 610, 787, 936, 1119, 1233, 1236, 2319, 2487
GsaI CCCAGC 2 cut(s) 27, 935
HaeIII GGCC 7 cut(s) 111, 609, 1497, 1551, 2028, 2184, 2555
HapII CCGG 4 cut(s) 2213, 2455, 2541, 2552
HgaI GACGC 4 cut(s) 821, 1110, 1645, 2525
Hin1I GRCGYC 1 cut(s) 1637
HincII GTYRAC 1 cut(s) 1092
HindII GTYRAC 1 cut(s) 1092
HindIII AAGCTT 3 cut(s) 304, 1128, 1924
HinfI GANTC 7 cut(s) 1045, 1570, 1589, 1604, 2162, 2331, 2361
HpaII CCGG 4 cut(s) 2213, 2455, 2541, 2552
HphI GGTGA 2 cut(s) 358, 770
Hpy166II GTNNAC 8 cut(s) 641, 749, 802, 883, 1031, 1092, 1635, 2285
Hpy8I GTNNAC 8 cut(s) 641, 749, 802, 883, 1031, 1092, 1635, 2285
Hpy99I CGWCG 1 cut(s) 1126
HpyCH4III ACNGT 7 cut(s) 124, 618, 628, 887, 1244, 2199, 2483
HpyCH4IV ACGT 1 cut(s) 2221
HpyF10VI GCNNNNNNNGC 9 cut(s) 303, 803, 812, 944, 1003, 1127, 1229, 1661, 2318
HpySE526I ACGT 1 cut(s) 2221
Hsp92I GRCGYC 1 cut(s) 1637
Kpn2I TCCGGA 1 cut(s) 2454
Kzo9I GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
LmnI GCTCC 4 cut(s) 403, 1138, 1181, 2341
Lsp1109I GCAGC 7 cut(s) 773, 947, 1105, 1219, 1247, 2305, 2473
LweI GCATC 8 cut(s) 373, 910, 1495, 1901, 1980, 2011, 2049, 2100
MaeI CTAG 7 cut(s) 702, 827, 1332, 1656, 1875, 1901, 2171
MaeII ACGT 1 cut(s) 2221
MaeIII GTNAC 8 cut(s) 124, 175, 459, 905, 1042, 1327, 2222, 2302
MalI GATC 7 cut(s) 429, 783, 1059, 1758, 1907, 2525, 2565
MboI GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
MboII GAAGA 7 cut(s) 157, 1590, 1829, 1835, 1897, 2042, 2316
MhlI GDGCHC 3 cut(s) 408, 1318, 2346
MlyI GAGTC 3 cut(s) 1039, 1598, 2325
MmeI TCCRAC 1 cut(s) 2369
Mph1103I ATGCAT 1 cut(s) 1510
MroI TCCGGA 1 cut(s) 2454
MroXI GAANNNNTTC 2 cut(s) 329, 480
MseI TTAA 8 cut(s) 375, 917, 1083, 1367, 1809, 1829, 2294, 2496
MslI CAYNNNNRTG 3 cut(s) 648, 1209, 2383
MspCI CTTAAG 1 cut(s) 1082
MspI CCGG 4 cut(s) 2213, 2455, 2541, 2552
MspR9I CCNGG 4 cut(s) 118, 836, 2274, 2541
MssI GTTTAAAC 1 cut(s) 376
Mva1269I GAATGC 1 cut(s) 1149
MvaI CCWGG 3 cut(s) 118, 836, 2274
MvnI CGCG 1 cut(s) 2536
MwoI GCNNNNNNNGC 9 cut(s) 303, 803, 812, 944, 1003, 1127, 1229, 1661, 2318
NciI CCSGG 1 cut(s) 2541
NdeII GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
NheI GCTAGC 1 cut(s) 2170
NlaIV GGNNCC 2 cut(s) 1293, 1411
NmuCI GTSAC 4 cut(s) 124, 459, 905, 1042
NsiI ATGCAT 1 cut(s) 1510
NspI RCATGY 2 cut(s) 1691, 2598
PaeR7I CTCGAG 1 cut(s) 407
PceI AGGCCT 1 cut(s) 1497
PctI GAATGC 1 cut(s) 1149
PdmI GAANNNNTTC 2 cut(s) 329, 480
PfeI GAWTC 4 cut(s) 1570, 1589, 2162, 2361
PflMI CCANNNNNTGG 1 cut(s) 509
PkrI GCNGC 9 cut(s) 110, 611, 788, 937, 1120, 1234, 1237, 2320, 2488
PleI GAGTC 3 cut(s) 1039, 1598, 2325
PmeI GTTTAAAC 1 cut(s) 376
PpsI GAGTC 3 cut(s) 1039, 1598, 2325
Psp124BI GAGCTC 1 cut(s) 408
Psp1406I AACGTT 1 cut(s) 2221
Psp6I CCWGG 3 cut(s) 116, 834, 2272
PspFI CCCAGC 2 cut(s) 23, 931
PspGI CCWGG 3 cut(s) 116, 834, 2272
PspN4I GGNNCC 2 cut(s) 1293, 1411
PspPI GGNCC 3 cut(s) 148, 1549, 2035
PstI CTGCAG 1 cut(s) 1237
PstNI CAGNNNCTG 2 cut(s) 815, 2334
RsaI GTAC 6 cut(s) 714, 750, 861, 1390, 1676, 2234
RsaNI GTAC 6 cut(s) 713, 749, 860, 1389, 1675, 2233
RseI CAYNNNNRTG 3 cut(s) 648, 1209, 2383
SacI GAGCTC 1 cut(s) 408
SaqAI TTAA 8 cut(s) 375, 917, 1083, 1367, 1809, 1829, 2294, 2496
SatI GCNGC 9 cut(s) 109, 610, 787, 936, 1119, 1233, 1236, 2319, 2487
Sau3AI GATC 7 cut(s) 427, 781, 1057, 1756, 1905, 2523, 2563
Sau96I GGNCC 3 cut(s) 148, 1549, 2035
ScaI AGTACT 2 cut(s) 861, 1676
SchI GAGTC 3 cut(s) 1039, 1598, 2325
ScrFI CCNGG 4 cut(s) 118, 836, 2274, 2541
SduI GDGCHC 3 cut(s) 408, 1318, 2346
SfaNI GCATC 8 cut(s) 373, 910, 1495, 1901, 1980, 2011, 2049, 2100
SfcI CTRYAG 2 cut(s) 1233, 2062
Sfr274I CTCGAG 1 cut(s) 407
SinI GGWCC 2 cut(s) 148, 2035
SlaI CTCGAG 1 cut(s) 407
SmiMI CAYNNNNRTG 3 cut(s) 648, 1209, 2383
SmlI CTYRAG 4 cut(s) 398, 407, 1082, 1270
SmoI CTYRAG 4 cut(s) 398, 407, 1082, 1270
SseBI AGGCCT 1 cut(s) 1497
SsiI CCGC 5 cut(s) 71, 108, 610, 1914, 2038
SspI AATATT 1 cut(s) 2468
SspMI CTAG 7 cut(s) 702, 827, 1332, 1656, 1875, 1901, 2171
SstI GAGCTC 1 cut(s) 408
StuI AGGCCT 1 cut(s) 1497
StyD4I CCNGG 4 cut(s) 116, 834, 2272, 2539
StyI CCWWGG 3 cut(s) 151, 441, 1189
TaaI ACNGT 7 cut(s) 124, 618, 628, 887, 1244, 2199, 2483
TaiI ACGT 1 cut(s) 2224
TaqI TCGA 6 cut(s) 289, 358, 408, 580, 1124, 2115
TatI WGTACW 4 cut(s) 748, 859, 1674, 2232
TauI GCSGC 2 cut(s) 111, 612
TfiI GAWTC 4 cut(s) 1570, 1589, 2162, 2361
Tru1I TTAA 8 cut(s) 375, 917, 1083, 1367, 1809, 1829, 2294, 2496
Tru9I TTAA 8 cut(s) 375, 917, 1083, 1367, 1809, 1829, 2294, 2496
TscAI CASTG 7 cut(s) 18, 623, 751, 892, 1305, 1804, 1972
TseFI GTSAC 4 cut(s) 124, 459, 905, 1042
TseI GCWGC 7 cut(s) 786, 935, 1118, 1232, 1235, 2318, 2486
Tsp45I GTSAC 4 cut(s) 124, 459, 905, 1042
TspGWI ACGGA 1 cut(s) 1123
TspRI CASTG 7 cut(s) 18, 623, 751, 892, 1305, 1804, 1972
Van91I CCANNNNNTGG 1 cut(s) 509
Vha464I CTTAAG 1 cut(s) 1082
VpaK11BI GGWCC 2 cut(s) 148, 2035
XagI CCTNNNNNAGG 1 cut(s) 534
XapI RAATTY 7 cut(s) 952, 1167, 1594, 2132, 2144, 2398, 2446
XbaI TCTAGA 2 cut(s) 1874, 1900
XceI RCATGY 2 cut(s) 1691, 2598
XcmI CCANNNNNNNNNTGG 1 cut(s) 2335
XhoI CTCGAG 1 cut(s) 407
XmiI GTMKAC 3 cut(s) 882, 1030, 2284
XmnI GAANNNNTTC 2 cut(s) 329, 480
XspI CTAG 7 cut(s) 702, 827, 1332, 1656, 1875, 1901, 2171
ZrmI AGTACT 2 cut(s) 861, 1676
Zsp2I ATGCAT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.