RLG00000009657

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000555
Physical Location & Seq
Forward (+)
55952672 .. 55964041
11370 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009657

Sequence Viewer

Length: 2592 bp
ATGAAAGTTGCAGTGATTGGTTCTGGTATTAGTGGTTTGGTCTCAGCCTATGTTCTTGCAAAAGAAGGTGTTGAAGTGGTTCTATATGAGAAAAAAGACTACCTGGGTGGTCTTGCCAGGACTGTCGCATATGATAGTGTTGATTTGGACCTTGGTTTCATGGTCTTCAATCATGTACTGTATCCAAACATGATGGAGTTTTTTGAGAGCCTTGGAGTTGATATGGAGACATGCGACATGTCCTTCTCAGTGAGTTTAGATAAAGGACGGGGATGTGAATGGAGTAATCGAAATAGTCTTTCAAGCTTGTTTGCAGAAAAGAAGAACTTGTTCAATCCATACTTCTGGAAAATGCTTCGAGAAATCACCAAGTTTAAACATGATTTAATCAGTTATCTTGAGGTGCTTGAGGGTAACCCAGACATTGACCGGAATGAAACCTTGGGGCAGTTTATTGAATCACATCACTACTCTGAACTATTTCTGAATGCTTACCTTATTCCAGTATGTAGTTCAATCTTGTGGTGTCCTTCAGAAGGGGTTATGAGCTTCTCAGCTTTCTCTGTGCTTTCAGTTTGTCGCAATCATCATCTACTTCAGCTATTTGGTGGTCCACAGTGGCTTACCGTCAAACGGGGTTCACATTGTTATGTGAAGAAGGTGAAAGAAGTGTTGGAGAGTAAAGGGTGTCAGATAAGAACCGGCTCTGAGGTGCATAAAGTTTCCACAACTGACGAGGGTTGCACTGTTTTTAATGGAGATGGTATTGAGGAAATTTACAATGGATGCATAATAGCTATCCATGCCCCTGATGCCATGAGAATATTAGGGGAACAGGCAACACCTGATGAACTGAGAATACTTGGAGCCTTCCAATATGTGTACTGTGATATTTTCCTTCATCGTGACAAAACTTTAATGCCCCAAAACCTAGCAGCATGGAGTGCATTGAACTATCTTGGAAGTACTGACAACAAAGTATGTTTGACATACTGGCTCAATCAGCTTCAGAACCTCGGTGAAACAAGTCAACCATATCTTGTGACACTCAATCCAGATCATACACCAAACCACACCTTGCTTAAGTGGTCAACAAGCCATCCAGTCCTATCTGTTGCTGCATCAAAAGCTTCGCTGGAGCTTCCTCATATTCAAGGAAAGAGAGGAATTTGGTTTTGTGGAGCATACCAGGGTTATGGCTTCCATGAGGATGGGCTAAAGGCTGGAATGGCTGCAGCACATGGAATGCTTGGAAAAGGTTGTGCCCTGTTGGGAAACCCAAAACATATGTCTTTTTCAATGACGGAAACAGCGGCACGCCTGTTTGTTATTAGATTTCTTAGACATTATATATCTACCGGATGTTTAATTTTATTGGAAGAAGGAGGCTCGATGTTCACCTTTGAGGGAAGCAGAAAGGACTGTTCTCTAAAATCCGTTCTTAAAGTTCACAGTCCTCAGTTTTACTGGAAAGTAATGACACAGGCTGATCTAGGCATTGCAGATGCATATATCAGTGGTGATTTTTCTTTTGATGATAAAGACCGAGGTCTTCTAAATCTTTTTATGCTTCTCATTGCCAACGGAGATTCTAATGCCTCAAAATCAAACAAGAAAAGGGGATGGTGGCAGCCTTTGTTTTTCACAGCCACTATAGCTTCAGCCAAATATTTCTTTCAGCATGCTTTAAGGCAAAATAGTCTTACACAGGCTCGAAGGAACATATCTCGACATTATGATCTGAGTAATGAACTATTTTCGCTGTTCTTGGGCGAAACAATGATGTATTCCACTGCAATATTTAAGACAGAAGATGAGGATTTGAATACTGCACAGCTTAGGAAAATCTCTACTCTCATTGATAAGGCAAGAATCGATGAGAACCATCAGGTTCTAGATATTGGTTGTGGCTGGGGAACCTTAGCTATTGAAGCAGTCAAACAAACGGGCTGCAGATACACTGGCATCACTCTATCCGAGGAACAACTTAAATTTGCTGAAAAGAAAGTGAAAGATGCTGGACTTCAGCACCGGATCAAGTTCCTTCTGTGTGACTACCGCCAATTACCTTCTTACCACAAATATGACAGAATCATATCTTGCGAGATGCTAGAACATGTTGGTCATGAATTTGTGGATGAGTTCTTTTCTTGCTGTGAGTCTGTACTGGCAAAAAATGGGCTTTTTATACTTCAGTTCATATCCACACCGGATGAACGCTATGATGACTACAGGCGAAGTTCAGACTTCATAAAGGAATATATATTTCCTGGTGCATGTGTACCTTCATTGAGTAGGGTAACATCAGCCATGGCCGCTTCTTCCAAACTCAGTGTGGAGCACATGGAAAACATTGGAATTCATTATTACCAAACACTAAAATGTTGGAGAAAGAATTTCTTAGAGAGACAGAGTGAAATACTTGCTCTTGGATTCAATGAAAATTTCATTCGAACATGGGAATATTATTTTGATTATTGCGCTGCTGGTTTCAAGTCATATACACTTGGAGATTACCAGATTGTGTTTTCACGTCCTTGTAATGCTCTCACATTCAACGATCCATATAAGGGTTTCCCATCAGCATATTAA

Protein Analysis

864

Amino Acids

97.88

Weight (kDa)

6.29

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAO PF01266 2 - 36 1.5e-06 FAD dependent oxidoreductase
NAD_binding_8 PF13450 5 - 71 1.4e-15 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 10 - 273 2.3e-18 Flavin containing amine oxidoreductase
CMAS PF02353 568 - 836 1.8e-79 Mycolic acid cyclopropane synthetase
Methyltransf_23 PF13489 614 - 738 8.1e-10 Methyltransferase domain
MTS PF05175 622 - 729 4.1e-07 Methyltransferase small domain
Methyltransf_31 PF13847 626 - 739 3.9e-14 Methyltransferase domain
Methyltransf_25 PF13649 631 - 727 2.1e-17 Methyltransferase domain
Methyltransf_11 PF08241 632 - 731 2.3e-14 Methyltransferase domain
Methyltransf_12 PF08242 632 - 729 2.8e-12 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000555)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23470 AT3G23470 AT3G23470 AT3G23480 AT3G23480 AT3G23480 AT3G23510 AT3G23530
fragaria_vesca FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_7g18110 FvH4_7g18140 FvH4_7g18480 FvH4_7g18481
malus_domestica MD16G1224400.v1.1
prunus_persica Prupe.1G045800_v2.0.a1
pyrus_communis pycom16g18780
rosa_chinensis RchiOBHm_Chr1g0325031 RchiOBHm_Chr1g0362281 RchiOBHm_Chr4g0394761 RchiOBHm_Chr4g0394801 RchiOBHm_Chr4g0394871 RchiOBHm_Chr4g0394921 RchiOBHm_Chr4g0394931 RchiOBHm_Chr4g0394941 RchiOBHm_Chr6g0273911
rosa_laevigata RLG00000009657 RLG00000009659 RLG00000009665 RLG00000013591 RLG00000027657
rosa_multiflora Rmu_sc0005356.1_g000006 Rmu_sc0005802.1_g000020 Rmu_sc0007125.1_g000012 Rmu_ssc0000009.1_g000024
rosa_roxburghii Rroxscaffold_5G00339800 Rroxscaffold_5G00339890 Rroxscaffold_7G00194930
rosa_rugosa Rorug01G0197800 Rorug01G0297000 Rorug01G0297100 Rorug03G0360900.1 Rorug03G0361000.1 Rorug03G0361200.1 Rorug03G0361700.1 Rorug03G0361800.1 Rorug03G0361900.1 Rorug04G0078200
rosa_samantha Rh1AG090300 Rh1AG305900 Rh1DG071500 Rh1DG299200 Rh1DG299300 Rh1DG299400 Rh4AG054900 Rh4BG052700 Rh4CG059500 Rh4CG060100 Rh4CG060200 Rh4DG051300 Rh4DG051800 Rh5BG441600 Rh6AG193200 Rh6CG196400
rosa_wichuraiana Rw1G027140 Rw4G003970 Rw4G004380 Rw4G004420 Rw4G004440 Rw6G016840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 1313, 2059, 2316
AclWI GGATC 2 cut(s) 2042, 2555
AcoI YGGCCR 1 cut(s) 2313
AcsI RAATTY 7 cut(s) 774, 1167, 1991, 2129, 2358, 2395, 2443
AcuI CTGAAG 6 cut(s) 516, 581, 992, 1644, 2009, 2177
AfaI GTAC 5 cut(s) 177, 884, 967, 2166, 2283
AfiI CCNNNNNNNGG 3 cut(s) 536, 633, 2570
AflII CTTAAG 1 cut(s) 1082
AflIII ACRYGT 2 cut(s) 237, 2116
AjiI CACGTC 1 cut(s) 2534
AjnI CCWGG 4 cut(s) 102, 116, 1188, 2269
AjuI GAANNNNNNNTTGG 4 cut(s) 425, 457, 656, 688
Alw21I GWGCWC 1 cut(s) 2343
Alw26I GTCTC 3 cut(s) 46, 221, 2401
AlwI GGATC 2 cut(s) 2042, 2555
AoxI GGCC 1 cut(s) 2313
ApeKI GCWGC 7 cut(s) 935, 1118, 1232, 1235, 1630, 1950, 2483
ApoI RAATTY 7 cut(s) 774, 1167, 1991, 2129, 2358, 2395, 2443
ArsI GACNNNNNNTTYG 2 cut(s) 1274, 1306
Asp700I GAANNNNTTC 3 cut(s) 78, 329, 480
AspLEI GCGC 1 cut(s) 2483
AspS9I GGNCC 2 cut(s) 148, 611
AsuHPI GGTGA 5 cut(s) 358, 673, 1031, 1390, 1532
AsuII TTCGAA 1 cut(s) 2452
AvaII GGWCC 2 cut(s) 148, 611
BaeGI GKGCMC 1 cut(s) 1267
BbsI GAAGAC 2 cut(s) 157, 1544
Bbv12I GWGCWC 1 cut(s) 2343
BbvI GCAGC 7 cut(s) 947, 1105, 1219, 1247, 1642, 1937, 2470
BccI CCATC 7 cut(s) 187, 755, 1107, 1205, 1617, 1893, 2587
BciT130I CCWGG 4 cut(s) 104, 118, 1190, 2271
BciVI GTATCC 1 cut(s) 192
BcoDI GTCTC 3 cut(s) 46, 221, 2401
BfaI CTAG 4 cut(s) 932, 1493, 1895, 2111
BfmI CTRYAG 4 cut(s) 1233, 1653, 1951, 2230
BfrI CTTAAG 1 cut(s) 1082
BfuI GTATCC 1 cut(s) 192
BisI GCNGC 9 cut(s) 936, 1119, 1233, 1236, 1314, 1631, 1951, 2316, 2484
BlsI GCNGC 9 cut(s) 937, 1120, 1234, 1237, 1315, 1632, 1952, 2317, 2485
BmcAI AGTACT 1 cut(s) 967
Bme1390I CCNGG 4 cut(s) 104, 118, 1190, 2271
Bme18I GGWCC 2 cut(s) 148, 611
BmgBI CACGTC 1 cut(s) 2534
BmgT120I GGNCC 2 cut(s) 148, 611
BmiI GGNNCC 2 cut(s) 868, 1918
BmrFI CCNGG 4 cut(s) 104, 118, 1190, 2271
BmsI GCATC 7 cut(s) 776, 802, 1130, 1495, 1974, 2005, 2097
BoxI GACNNNNGTC 1 cut(s) 1548
BpiI GAAGAC 2 cut(s) 157, 1544
BpmI CTGGAG 1 cut(s) 1157
Bpu10I CCTNAGC 2 cut(s) 1838, 1921
Bpu14I TTCGAA 1 cut(s) 2452
BpuEI CTTGAG 2 cut(s) 419, 428
Bsa29I ATCGAT 1 cut(s) 1875
BsaI GGTCTC 1 cut(s) 46
BsaJI CCNNGG 9 cut(s) 103, 151, 211, 441, 1015, 1189, 1546, 1977, 2310
BsaWI WCCGGW 4 cut(s) 429, 1358, 2031, 2209
Bsc4I CCNNNNNNNGG 3 cut(s) 536, 633, 2570
Bse118I RCCGGY 1 cut(s) 701
Bse1I ACTGG 6 cut(s) 503, 998, 1103, 1472, 1966, 2172
Bse3DI GCAATG 2 cut(s) 1497, 1575
BseBI CCWGG 4 cut(s) 104, 118, 1190, 2271
BseCI ATCGAT 1 cut(s) 1875
BseDI CCNNGG 9 cut(s) 103, 151, 211, 441, 1015, 1189, 1546, 1977, 2310
BseGI GGATG 8 cut(s) 278, 791, 1099, 1216, 1367, 1628, 2143, 2218
BseLI CCNNNNNNNGG 3 cut(s) 536, 633, 2570
BseMI GCAATG 2 cut(s) 1497, 1575
BseMII CTCAG 8 cut(s) 57, 261, 567, 699, 845, 1472, 1733, 2344
BseNI ACTGG 6 cut(s) 503, 998, 1103, 1472, 1966, 2172
BseSI GKGCMC 1 cut(s) 1267
BseXI GCAGC 7 cut(s) 947, 1105, 1219, 1247, 1642, 1937, 2470
BseYI CCCAGC 1 cut(s) 1911
BsgI GTGCAG 1 cut(s) 1815
BshFI GGCC 1 cut(s) 2315
BshVI ATCGAT 1 cut(s) 1875
BsiHKAI GWGCWC 1 cut(s) 2343
BsiSI CCGG 5 cut(s) 430, 702, 1359, 2032, 2210
BslI CCNNNNNNNGG 3 cut(s) 536, 633, 2570
BsmAI GTCTC 3 cut(s) 46, 221, 2401
BsmI GAATGC 2 cut(s) 493, 1251
BsnI GGCC 1 cut(s) 2315
Bso31I GGTCTC 1 cut(s) 46
Bsp119I TTCGAA 1 cut(s) 2452
Bsp1286I GDGCHC 2 cut(s) 1267, 2343
Bsp143I GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
Bsp19I CCATGG 1 cut(s) 2310
BspACI CCGC 3 cut(s) 1313, 2059, 2316
BspANI GGCC 1 cut(s) 2315
BspCNI CTCAG 8 cut(s) 56, 260, 566, 700, 846, 1471, 1734, 2343
BspDI ATCGAT 1 cut(s) 1875
BspHI TCATGA 1 cut(s) 2125
BspLI GGNNCC 2 cut(s) 868, 1918
BspMAI CTGCAG 2 cut(s) 1237, 1955
BspPI GGATC 2 cut(s) 2042, 2555
BspT104I TTCGAA 1 cut(s) 2452
BspTI CTTAAG 1 cut(s) 1082
BspTNI GGTCTC 1 cut(s) 46
BsrDI GCAATG 2 cut(s) 1497, 1575
BsrFI RCCGGY 1 cut(s) 701
BsrI ACTGG 6 cut(s) 503, 998, 1103, 1472, 1966, 2172
BssAI RCCGGY 1 cut(s) 701
BssECI CCNNGG 9 cut(s) 103, 151, 211, 441, 1015, 1189, 1546, 1977, 2310
BssMI GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
BssT1I CCWWGG 4 cut(s) 151, 211, 441, 2310
Bst2UI CCWGG 4 cut(s) 104, 118, 1190, 2271
Bst4CI ACNGT 8 cut(s) 124, 180, 618, 628, 748, 887, 1424, 1454
BstAFI CTTAAG 1 cut(s) 1082
BstAPI GCANNNNNTGC 1 cut(s) 944
BstBI TTCGAA 1 cut(s) 2452
BstC8I GCNNGC 2 cut(s) 1318, 1683
BstDSI CCRYGG 1 cut(s) 2310
BstEII GGTNACC 1 cut(s) 413
BstENI CCTNNNNNAGG 1 cut(s) 534
BstF5I GGATG 8 cut(s) 278, 791, 1099, 1216, 1367, 1628, 2143, 2218
BstHHI GCGC 1 cut(s) 2483
BstKTI GATC 5 cut(s) 1060, 1492, 1741, 2037, 2563
BstMAI GTCTC 3 cut(s) 46, 221, 2401
BstMBI GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
BstMWI GCNNNNNNNGC 9 cut(s) 803, 812, 944, 1003, 1127, 1229, 1655, 1931, 2315
BstNI CCWGG 4 cut(s) 104, 118, 1190, 2271
BstNSI RCATGY 5 cut(s) 234, 241, 1685, 2120, 2280
BstPAI GACNNNNGTC 1 cut(s) 1548
BstPI GGTNACC 1 cut(s) 413
BstSCI CCNGG 4 cut(s) 102, 116, 1188, 2269
BstSFI CTRYAG 4 cut(s) 1233, 1653, 1951, 2230
BstSLI GKGCMC 1 cut(s) 1267
BstV1I GCAGC 7 cut(s) 947, 1105, 1219, 1247, 1642, 1937, 2470
BstV2I GAAGAC 2 cut(s) 157, 1544
BstXI CCANNNNNNTGG 3 cut(s) 345, 1196, 1211
Bsu15I ATCGAT 1 cut(s) 1875
BsuI GTATCC 1 cut(s) 192
BsuRI GGCC 1 cut(s) 2315
BsuTUI ATCGAT 1 cut(s) 1875
BtgI CCRYGG 1 cut(s) 2310
BtrI CACGTC 1 cut(s) 2534
BtsCI GGATG 8 cut(s) 278, 791, 1099, 1216, 1367, 1628, 2143, 2218
BtsI GCAGTG 2 cut(s) 18, 1791
BtsIMutI CAGTG 8 cut(s) 18, 255, 623, 744, 1522, 1791, 1959, 2338
Cac8I GCNNGC 2 cut(s) 1318, 1683
CciI TCATGA 1 cut(s) 2125
CfoI GCGC 1 cut(s) 2483
Cfr10I RCCGGY 1 cut(s) 701
Cfr13I GGNCC 2 cut(s) 148, 611
ClaI ATCGAT 1 cut(s) 1875
Csp6I GTAC 5 cut(s) 176, 883, 966, 2165, 2282
CviQI GTAC 5 cut(s) 176, 883, 966, 2165, 2282
DpnI GATC 5 cut(s) 1059, 1491, 1740, 2036, 2562
DpnII GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
DraI TTTAAA 1 cut(s) 376
EaeI YGGCCR 1 cut(s) 2313
Eco130I CCWWGG 4 cut(s) 151, 211, 441, 2310
Eco31I GGTCTC 1 cut(s) 46
Eco47I GGWCC 2 cut(s) 148, 611
Eco57I CTGAAG 6 cut(s) 516, 581, 992, 1644, 2009, 2177
Eco91I GGTNACC 1 cut(s) 413
EcoNI CCTNNNNNAGG 1 cut(s) 534
EcoO65I GGTNACC 1 cut(s) 413
EcoRI GAATTC 1 cut(s) 2358
EcoRII CCWGG 4 cut(s) 102, 116, 1188, 2269
EcoT14I CCWWGG 4 cut(s) 151, 211, 441, 2310
EcoT22I ATGCAT 2 cut(s) 791, 1510
ErhI CCWWGG 4 cut(s) 151, 211, 441, 2310
FalI AAGNNNNNCTT 4 cut(s) 311, 343, 2384, 2416
FauNDI CATATG 2 cut(s) 130, 1287
Fnu4HI GCNGC 9 cut(s) 936, 1119, 1233, 1236, 1314, 1631, 1951, 2316, 2484
FokI GGATG 8 cut(s) 285, 798, 1086, 1223, 1374, 1635, 2150, 2225
Fsp4HI GCNGC 9 cut(s) 936, 1119, 1233, 1236, 1314, 1631, 1951, 2316, 2484
FspBI CTAG 4 cut(s) 932, 1493, 1895, 2111
GlaI GCGC 1 cut(s) 2482
GluI GCNGC 9 cut(s) 936, 1119, 1233, 1236, 1314, 1631, 1951, 2316, 2484
GsaI CCCAGC 1 cut(s) 1915
GsuI CTGGAG 1 cut(s) 1157
HaeIII GGCC 1 cut(s) 2315
HapII CCGG 5 cut(s) 430, 702, 1359, 2032, 2210
HhaI GCGC 1 cut(s) 2483
Hin6I GCGC 1 cut(s) 2481
HinP1I GCGC 1 cut(s) 2481
HincII GTYRAC 2 cut(s) 1031, 1092
HindII GTYRAC 2 cut(s) 1031, 1092
HindIII AAGCTT 2 cut(s) 304, 1128
HinfI GANTC 6 cut(s) 458, 1589, 1872, 2091, 2159, 2433
HpaII CCGG 5 cut(s) 430, 702, 1359, 2032, 2210
HphI GGTGA 5 cut(s) 358, 673, 1031, 1390, 1532
Hpy166II GTNNAC 8 cut(s) 614, 641, 883, 1031, 1092, 1398, 1450, 2282
Hpy188I TCNGA 9 cut(s) 475, 486, 535, 693, 709, 1011, 1743, 1978, 2245
Hpy188III TCNNGA 8 cut(s) 346, 359, 398, 905, 1055, 1728, 1895, 2126
Hpy8I GTNNAC 8 cut(s) 614, 641, 883, 1031, 1092, 1398, 1450, 2282
HpyCH4III ACNGT 8 cut(s) 124, 180, 618, 628, 748, 887, 1424, 1454
HpyCH4IV ACGT 1 cut(s) 2533
HpyF10VI GCNNNNNNNGC 9 cut(s) 803, 812, 944, 1003, 1127, 1229, 1655, 1931, 2315
HpySE526I ACGT 1 cut(s) 2533
HspAI GCGC 1 cut(s) 2481
Kzo9I GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
LmnI GCTCC 4 cut(s) 866, 1138, 1181, 2338
Lsp1109I GCAGC 7 cut(s) 947, 1105, 1219, 1247, 1642, 1937, 2470
LweI GCATC 7 cut(s) 776, 802, 1130, 1495, 1974, 2005, 2097
MaeI CTAG 4 cut(s) 932, 1493, 1895, 2111
MaeII ACGT 1 cut(s) 2533
MaeIII GTNAC 5 cut(s) 413, 905, 1042, 2051, 2299
MalI GATC 5 cut(s) 1059, 1491, 1740, 2036, 2562
MboI GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
MboII GAAGA 7 cut(s) 157, 334, 667, 1391, 1544, 1823, 2313
MhlI GDGCHC 2 cut(s) 1267, 2343
MluCI AATT 9 cut(s) 774, 1167, 1368, 1991, 2063, 2129, 2358, 2395, 2443
MlyI GAGTC 1 cut(s) 2168
MmeI TCCRAC 2 cut(s) 654, 2366
Mph1103I ATGCAT 2 cut(s) 791, 1510
MroXI GAANNNNTTC 3 cut(s) 78, 329, 480
MslI CAYNNNNRTG 4 cut(s) 648, 1209, 2082, 2380
MspA1I CMGCKG 1 cut(s) 1313
MspCI CTTAAG 1 cut(s) 1082
MspI CCGG 5 cut(s) 430, 702, 1359, 2032, 2210
MspR9I CCNGG 4 cut(s) 104, 118, 1190, 2271
MssI GTTTAAAC 1 cut(s) 376
Mva1269I GAATGC 2 cut(s) 493, 1251
MvaI CCWGG 4 cut(s) 104, 118, 1190, 2271
MwoI GCNNNNNNNGC 9 cut(s) 803, 812, 944, 1003, 1127, 1229, 1655, 1931, 2315
NcoI CCATGG 1 cut(s) 2310
NdeI CATATG 2 cut(s) 130, 1287
NdeII GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
NlaIV GGNNCC 2 cut(s) 868, 1918
NmuCI GTSAC 3 cut(s) 905, 1042, 2051
NsiI ATGCAT 2 cut(s) 791, 1510
NspI RCATGY 5 cut(s) 234, 241, 1685, 2120, 2280
NspV TTCGAA 1 cut(s) 2452
PaeI GCATGC 1 cut(s) 1685
PagI TCATGA 1 cut(s) 2125
PciI ACATGT 2 cut(s) 237, 2116
PctI GAATGC 2 cut(s) 493, 1251
PdmI GAANNNNTTC 3 cut(s) 78, 329, 480
PfeI GAWTC 5 cut(s) 458, 1589, 1872, 2091, 2433
PkrI GCNGC 9 cut(s) 937, 1120, 1234, 1237, 1315, 1632, 1952, 2317, 2485
PleI GAGTC 1 cut(s) 2167
PmeI GTTTAAAC 1 cut(s) 376
PpsI GAGTC 1 cut(s) 2167
PscI ACATGT 2 cut(s) 237, 2116
PshAI GACNNNNGTC 1 cut(s) 1548
Psp6I CCWGG 4 cut(s) 102, 116, 1188, 2269
PspEI GGTNACC 1 cut(s) 413
PspFI CCCAGC 1 cut(s) 1911
PspGI CCWGG 4 cut(s) 102, 116, 1188, 2269
PspN4I GGNNCC 2 cut(s) 868, 1918
PspPI GGNCC 2 cut(s) 148, 611
PsrI GAACNNNNNNTAC 2 cut(s) 843, 875
PstI CTGCAG 2 cut(s) 1237, 1955
RsaI GTAC 5 cut(s) 177, 884, 967, 2166, 2283
RsaNI GTAC 5 cut(s) 176, 883, 966, 2165, 2282
RseI CAYNNNNRTG 4 cut(s) 648, 1209, 2082, 2380
SatI GCNGC 9 cut(s) 936, 1119, 1233, 1236, 1314, 1631, 1951, 2316, 2484
Sau3AI GATC 5 cut(s) 1057, 1489, 1738, 2034, 2560
Sau96I GGNCC 2 cut(s) 148, 611
ScaI AGTACT 1 cut(s) 967
SchI GAGTC 1 cut(s) 2168
ScrFI CCNGG 4 cut(s) 104, 118, 1190, 2271
SduI GDGCHC 2 cut(s) 1267, 2343
SfaNI GCATC 7 cut(s) 776, 802, 1130, 1495, 1974, 2005, 2097
SfcI CTRYAG 4 cut(s) 1233, 1653, 1951, 2230
SfuI TTCGAA 1 cut(s) 2452
SinI GGWCC 2 cut(s) 148, 611
SmiMI CAYNNNNRTG 4 cut(s) 648, 1209, 2082, 2380
SmlI CTYRAG 3 cut(s) 398, 407, 1082
SmoI CTYRAG 3 cut(s) 398, 407, 1082
SphI GCATGC 1 cut(s) 1685
Sse9I AATT 9 cut(s) 774, 1167, 1368, 1991, 2063, 2129, 2358, 2395, 2443
SsiI CCGC 3 cut(s) 1313, 2059, 2316
SspI AATATT 4 cut(s) 825, 1670, 1800, 2465
SspMI CTAG 4 cut(s) 932, 1493, 1895, 2111
StyD4I CCNGG 4 cut(s) 102, 116, 1188, 2269
StyI CCWWGG 4 cut(s) 151, 211, 441, 2310
TaaI ACNGT 8 cut(s) 124, 180, 618, 628, 748, 887, 1424, 1454
TaiI ACGT 1 cut(s) 2536
TaqI TCGA 7 cut(s) 289, 358, 1391, 1714, 1729, 1875, 2452
TaqII GACCGA 1 cut(s) 1560
TasI AATT 9 cut(s) 774, 1167, 1368, 1991, 2063, 2129, 2358, 2395, 2443
TatI WGTACW 4 cut(s) 175, 882, 965, 2164
TauI GCSGC 2 cut(s) 1316, 2318
TfiI GAWTC 5 cut(s) 458, 1589, 1872, 2091, 2433
TscAI CASTG 8 cut(s) 18, 255, 623, 751, 1522, 1798, 1966, 2338
TseFI GTSAC 3 cut(s) 905, 1042, 2051
TseI GCWGC 7 cut(s) 935, 1118, 1232, 1235, 1630, 1950, 2483
Tsp45I GTSAC 3 cut(s) 905, 1042, 2051
TspGWI ACGGA 3 cut(s) 1319, 1426, 1599
TspRI CASTG 8 cut(s) 18, 255, 623, 751, 1522, 1798, 1966, 2338
Vha464I CTTAAG 1 cut(s) 1082
VpaK11BI GGWCC 2 cut(s) 148, 611
XagI CCTNNNNNAGG 1 cut(s) 534
XapI RAATTY 7 cut(s) 774, 1167, 1991, 2129, 2358, 2395, 2443
XbaI TCTAGA 1 cut(s) 1894
XceI RCATGY 5 cut(s) 234, 241, 1685, 2120, 2280
XcmI CCANNNNNNNNNTGG 1 cut(s) 2332
XmnI GAANNNNTTC 3 cut(s) 78, 329, 480
XspI CTAG 4 cut(s) 932, 1493, 1895, 2111
ZrmI AGTACT 1 cut(s) 967
Zsp2I ATGCAT 2 cut(s) 791, 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.