pycom16g18780

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000555
Physical Location & Seq
Forward (+)
15551333 .. 15565963
14631 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g18780.2

Sequence Viewer

Length: 2589 bp
ATGAGAGTGGCAGTGATTGGTGCTGGGATTAGTGGGTTGGTGTCTGCCTATGTTCTTGCAAAGGAAGGGGTGGAAGTGGTGCTGTATGAGAAGGATGACTACTTGGGCGGCCATGCCAGGACTGTCACATTTGATGGTGTTGATTTGGACCTCGGTTTCATGGTCTTCAATCGTGTAACTTATCCAAATATGATGGAGTTCTTTGAGAGCCTTGGGGTTGATATGGAGACATCTGACATGTCCTTCTCAGCGAGCTTAGACAATGGACGGGGGTGTGAATGGGGCAGCAGAAATGGTTTGTCGGGCTTGTTTGCACAAAAGACCAACTTGATCAATCCATACTTCTGGCAAATGCTTCGAGAATTAACAAAGTTTAAACATGATGCAATCAATTATCTTGGGGAGCTTGAGAACAACCCGGACATTGATCGCAGTGAAACCTTGGGGCAGTTTATCAAGTCACGTGGCTACTCTGAATTGTTTCAGAAGGCTTATCTTGTTCCAGTATGTGGGTCAATCTGGTCTTGTCCTTCAGATGGAGTTATGAGCTTCTCAGCCTTCTCTGTTCTTTCATTTTGTCGCAATCACCATCTACTTCAGCTATTTGGGCGTCCACAGTGGCTTACTGTCAGATGGCGTTCACATTGTTATGTGAAGAAGGTCAGAGAAGTTCTGGAGAGTAAAGGCTGTCACATAAGAACTAGCTCTGAAGTACATAGGGTGTCCACATCTGATGAGGGTTGCACTGTAATCTCTGGTGATGGTTTGGAGGAAGTATTCAATGGATGCATAATGGCTGTCCACGCTCCTGATGCCGTGAGAATTCTAGGCGACCAGGCCACATCGGATGAGTTGAGAGTTCTTGGTGCTTTCCAATATGTGTACAGTGACATTTTTCTGCATCGTGACAAAAATTTAATGCCCCGCAACCCAGCAGCATGGAGTGCGTGGAATTTTCTCGGAAGTAATGGCAACAAAGTTTGTTTGACATACTGGCTCAATGTGCTCCAGAACATTGATGAAACCGGTCTTCCATTTCTTGTGACCCTGAATCCAGAACACACACCAAAACATACCTCGCTTAAGTGGTCGACAAGCCATCCAGTCCCATCTGTTGCTGCATCGAAGGCTTCGCTTGAGCTTCCTCGTATTCAAGGAAAAAGAGGAATTTGGTTTTGTGGAGCATATCAGGGGTATGGCTTCCATGAGGATGGACTAAAGGCTGGAATGGATGCAGCACATGGTTTGCTTGGAAAAGGTTGTGCCCTCTTGGACAACCCAAAACACATGGTTCCGTCGCTGACAGAAACAGGGGCACGCCTTTTTGTTACTAGATTTCTTGCACATTTTATCTCTACCGGATGTTTGATTTTCTTAGAGGAAGGAGGAACAATTTTCACCTTTGAGGGAACCGGAAAAGGGTGTTCTCTGAAATGTGTTATTAAAGTTCATAATCCTCAGTTTTACTGGAAGGTAATGACACAGGCTGATTTAGGCCTAGCAGATGCATATATCAATGGGGATTTTTCATTCGTTGACAAAGACAAAGGTCTTTTAAATCTTATAATGATTCTCATCGCCAACAGAGACGCAAATTCTTCGGACTCAAAACTGACCAAGAAAAGGGGATGGTGGACGCCATTGTTATTCACAGCTAGTATAGCATCAGCAAAATATTTTTTCCAGCATGTTTCGAGGCAAAATACTCTCACTCAGGCTCGCAGGAACATCTCTCGTCATTATGACCTGAGTAATGAACTATTCTCGCTGTTCTTGGACGAGACAATGACGTATTCCAGTGCTGTATTTAAGACAGAAAATGAAGACTTAAAGGTTGCTCAGCTGAGGAAGATCTCCATGCTGATTGAAAAGGCTAGAATTGAAAAGAACCATGAAGTTCTGGAGATTGGATGCGGTTGGGGAAGCTTAGCTATTAAAGTCGTCAAACAAACAGGTTGCAAATACACCGGGATCACACTGTCCGAGGAACAACTGAAATATGCACAAGAGAAAGTGAAAGAGGCTGGCCTTCAGGACCGCATCAAATTTCTTCTGTGCGATTACCGCCAGCTTGCTAACAACAAATATGACAGAATTATATCTTGCGAGATGCTAGAAAGCGTGGGGCATGAATTTATGGACGAATTCTTTTCGTGCTGTGAATCTGTGCTAGCAGAAAATGGCCTTCTTGTTCTACAGTTCATATCAATACCAGATCAGCGCTACGATGAGTACAGGCGAAGTTCAGACTTCATAAAGGAATATATTTTTCCGGGTGGATGTCTACCTTCGTTAAGTAGGGTAACATCGGCAATGGCTGCTTCTTCCAGACTCTGCGTGGAGCACCTGGAGAACATTGGAATCCATTACTTCCAAACACTCAGATATTGGAGAAAAAATTTCATGGACAGACAAAGTGAAATACTCGCTCTTGGATTCGATGAAAAGTTCATCCGGACGTGGGAGTATTATTTTGATTATTGCGCGGCCGGTTTTAGGACGTGTACTCTTGGAAATTACCAGATGGTGTTTTCACGCCCCGGCAATGTTCCGGCATTCAGCAATCCGTACGAAGGCAAGTGCTGCTGA

Protein Analysis

863

Amino Acids

97.42

Weight (kDa)

6.55

Isoelectric Point (pI)

32.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000555)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23470 AT3G23470 AT3G23470 AT3G23480 AT3G23480 AT3G23480 AT3G23510 AT3G23530
fragaria_vesca FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_7g18110 FvH4_7g18140 FvH4_7g18480 FvH4_7g18481
malus_domestica MD16G1224400.v1.1
prunus_persica Prupe.1G045800_v2.0.a1
pyrus_communis pycom16g18780
rosa_chinensis RchiOBHm_Chr1g0325031 RchiOBHm_Chr1g0362281 RchiOBHm_Chr4g0394761 RchiOBHm_Chr4g0394801 RchiOBHm_Chr4g0394871 RchiOBHm_Chr4g0394921 RchiOBHm_Chr4g0394931 RchiOBHm_Chr4g0394941 RchiOBHm_Chr6g0273911
rosa_laevigata RLG00000009657 RLG00000009659 RLG00000009665 RLG00000013591 RLG00000027657
rosa_multiflora Rmu_sc0005356.1_g000006 Rmu_sc0005802.1_g000020 Rmu_sc0007125.1_g000012 Rmu_ssc0000009.1_g000024
rosa_roxburghii Rroxscaffold_5G00339800 Rroxscaffold_5G00339890 Rroxscaffold_7G00194930
rosa_rugosa Rorug01G0197800 Rorug01G0297000 Rorug01G0297100 Rorug03G0360900.1 Rorug03G0361000.1 Rorug03G0361200.1 Rorug03G0361700.1 Rorug03G0361800.1 Rorug03G0361900.1 Rorug04G0078200
rosa_samantha Rh1AG090300 Rh1AG305900 Rh1DG071500 Rh1DG299200 Rh1DG299300 Rh1DG299400 Rh4AG054900 Rh4BG052700 Rh4CG059500 Rh4CG060100 Rh4CG060200 Rh4DG051300 Rh4DG051800 Rh5BG441600 Rh6AG193200 Rh6CG196400
rosa_wichuraiana Rw1G027140 Rw4G003970 Rw4G004380 Rw4G004420 Rw4G004440 Rw6G016840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1565
AccB7I CCANNNNNTGG 1 cut(s) 509
AccI GTMKAC 2 cut(s) 1091, 2284
AccII CGCG 1 cut(s) 2486
AccIII TCCGGA 1 cut(s) 2454
AciI CCGC 6 cut(s) 108, 925, 1914, 2038, 2065, 2486
AclWI GGATC 1 cut(s) 1979
AcoI YGGCCR 2 cut(s) 109, 2487
AcsI RAATTY 9 cut(s) 822, 913, 952, 1167, 1594, 2045, 2132, 2144, 2398
AcuI CTGAAG 4 cut(s) 516, 581, 729, 2015
AcvI CACGTG 1 cut(s) 464
AcyI GRCGYC 2 cut(s) 610, 1637
AfaI GTAC 5 cut(s) 714, 884, 2234, 2506, 2570
AfeI AGCGCT 1 cut(s) 2222
AfiI CCNNNNNNNGG 7 cut(s) 509, 536, 1419, 1623, 2461, 2496, 2573
AflII CTTAAG 1 cut(s) 1082
AflIII ACRYGT 2 cut(s) 237, 2501
AgeI ACCGGT 1 cut(s) 1025
AgsI TTSAA 5 cut(s) 169, 781, 1154, 1868, 1883
AjiI CACGTC 2 cut(s) 2460, 2502
AjnI CCWGG 3 cut(s) 116, 834, 2346
Alw21I GWGCWC 2 cut(s) 1008, 2346
Alw26I GTCTC 3 cut(s) 221, 1581, 1775
AlwI GGATC 1 cut(s) 1979
AlwNI CAGNNNCTG 1 cut(s) 2334
Aor13HI TCCGGA 1 cut(s) 2454
Aor51HI AGCGCT 1 cut(s) 2222
AoxI GGCC 6 cut(s) 109, 837, 1495, 2026, 2182, 2487
ApeKI GCWGC 6 cut(s) 285, 935, 1118, 1235, 2318, 2583
ApoI RAATTY 9 cut(s) 822, 913, 952, 1167, 1594, 2045, 2132, 2144, 2398
AsiGI ACCGGT 1 cut(s) 1025
Asp700I GAANNNNTTC 1 cut(s) 480
AspLEI GCGC 2 cut(s) 2223, 2486
AspS9I GGNCC 2 cut(s) 148, 2035
AsuC2I CCSGG 4 cut(s) 419, 1969, 2274, 2541
AsuHPI GGTGA 3 cut(s) 578, 770, 1390
AsuNHI GCTAGC 1 cut(s) 2170
AvaII GGWCC 2 cut(s) 148, 2035
BaeGI GKGCMC 2 cut(s) 1267, 1318
BarI GAAGNNNNNNTAC 2 cut(s) 83, 115
BbrPI CACGTG 1 cut(s) 464
BbsI GAAGAC 3 cut(s) 157, 1022, 1830
Bbv12I GWGCWC 2 cut(s) 1008, 2346
BbvCI CCTCAGC 1 cut(s) 1844
BbvI GCAGC 6 cut(s) 297, 947, 1105, 1247, 2305, 2570
BceAI ACGGC 1 cut(s) 800
BcgI CGANNNNNNTGC 4 cut(s) 338, 372, 1581, 1615
BciT130I CCWGG 3 cut(s) 118, 836, 2348
BclI TGATCA 1 cut(s) 330
BcnI CCSGG 4 cut(s) 419, 1969, 2274, 2541
BcoDI GTCTC 3 cut(s) 221, 1581, 1775
BfaI CTAG 8 cut(s) 702, 827, 1332, 1499, 1656, 1875, 2114, 2171
BfmI CTRYAG 1 cut(s) 2195
BfoI RGCGCY 1 cut(s) 2224
BfrI CTTAAG 1 cut(s) 1082
BglII AGATCT 1 cut(s) 1851
BisI GCNGC 8 cut(s) 109, 286, 936, 1119, 1236, 2319, 2487, 2584
BlpI GCTNAGC 2 cut(s) 1839, 1927
BlsI GCNGC 8 cut(s) 110, 287, 937, 1120, 1237, 2320, 2488, 2585
Bme1390I CCNGG 7 cut(s) 118, 419, 836, 1969, 2274, 2348, 2541
Bme18I GGWCC 2 cut(s) 148, 2035
BmgBI CACGTC 2 cut(s) 2460, 2502
BmgT120I GGNCC 2 cut(s) 148, 2035
BmiI GGNNCC 2 cut(s) 1293, 1411
BmrFI CCNGG 7 cut(s) 118, 419, 836, 1969, 2274, 2348, 2541
BmtI GCTAGC 1 cut(s) 2174
BoxI GACNNNNGTC 1 cut(s) 1548
BpiI GAAGAC 3 cut(s) 157, 1022, 1830
BpmI CTGGAG 4 cut(s) 695, 992, 1922, 2369
Bpu10I CCTNAGC 1 cut(s) 1844
Bpu1102I GCTNAGC 2 cut(s) 1839, 1927
BpuEI CTTGAG 2 cut(s) 428, 1157
BpuMI CCSGG 4 cut(s) 419, 1969, 2274, 2541
BsaAI YACGTR 1 cut(s) 464
BsaBI GATNNNNATC 1 cut(s) 1574
BsaHI GRCGYC 2 cut(s) 610, 1637
BsaJI CCNNGG 5 cut(s) 151, 211, 441, 1983, 2539
BsaWI WCCGGW 4 cut(s) 1025, 1358, 1412, 2454
Bsc4I CCNNNNNNNGG 7 cut(s) 509, 536, 1419, 1623, 2461, 2496, 2573
Bse118I RCCGGY 2 cut(s) 1025, 2489
Bse1I ACTGG 5 cut(s) 503, 998, 1103, 1472, 1797
Bse3DI GCAATG 2 cut(s) 2319, 2551
Bse8I GATNNNNATC 1 cut(s) 1574
BseAI TCCGGA 1 cut(s) 2454
BseBI CCWGG 3 cut(s) 118, 836, 2348
BseDI CCNNGG 5 cut(s) 151, 211, 441, 1983, 2539
BseJI GATNNNNATC 1 cut(s) 1574
BseLI CCNNNNNNNGG 7 cut(s) 509, 536, 1419, 1623, 2461, 2496, 2573
BseMI GCAATG 2 cut(s) 2319, 2551
BseMII CTCAG 8 cut(s) 261, 567, 1472, 1727, 1739, 1835, 1853, 2395
BseNI ACTGG 5 cut(s) 503, 998, 1103, 1472, 1797
BseSI GKGCMC 2 cut(s) 1267, 1318
BseX3I CGGCCG 1 cut(s) 2487
BseXI GCAGC 6 cut(s) 297, 947, 1105, 1247, 2305, 2570
BseYI CCCAGC 2 cut(s) 23, 931
Bsh1236I CGCG 1 cut(s) 2486
Bsh1285I CGRYCG 1 cut(s) 2490
BshFI GGCC 6 cut(s) 111, 839, 1497, 2028, 2184, 2489
BshTI ACCGGT 1 cut(s) 1025
BsiEI CGRYCG 1 cut(s) 2490
BsiHKAI GWGCWC 2 cut(s) 1008, 2346
BsiWI CGTACG 1 cut(s) 2568
BslFI GGGAC 1 cut(s) 1091
BslI CCNNNNNNNGG 7 cut(s) 509, 536, 1419, 1623, 2461, 2496, 2573
BsmAI GTCTC 3 cut(s) 221, 1581, 1775
BsmBI CGTCTC 1 cut(s) 1581
BsmFI GGGAC 1 cut(s) 1091
BsmI GAATGC 1 cut(s) 2555
BsnI GGCC 6 cut(s) 111, 839, 1497, 2028, 2184, 2489
Bsp1286I GDGCHC 4 cut(s) 1008, 1267, 1318, 2346
Bsp13I TCCGGA 1 cut(s) 2454
Bsp1407I TGTACA 1 cut(s) 882
Bsp143I GATC 5 cut(s) 330, 427, 1851, 1971, 2215
Bsp1720I GCTNAGC 2 cut(s) 1839, 1927
BspACI CCGC 6 cut(s) 108, 925, 1914, 2038, 2065, 2486
BspANI GGCC 6 cut(s) 111, 839, 1497, 2028, 2184, 2489
BspCNI CTCAG 8 cut(s) 260, 566, 1471, 1726, 1740, 1836, 1852, 2394
BspEI TCCGGA 1 cut(s) 2454
BspFNI CGCG 1 cut(s) 2486
BspLI GGNNCC 2 cut(s) 1293, 1411
BspOI GCTAGC 1 cut(s) 2174
BspPI GGATC 1 cut(s) 1979
BspTI CTTAAG 1 cut(s) 1082
BsrDI GCAATG 2 cut(s) 2319, 2551
BsrFI RCCGGY 2 cut(s) 1025, 2489
BsrGI TGTACA 1 cut(s) 882
BsrI ACTGG 5 cut(s) 503, 998, 1103, 1472, 1797
BssAI RCCGGY 2 cut(s) 1025, 2489
BssECI CCNNGG 5 cut(s) 151, 211, 441, 1983, 2539
BssMI GATC 5 cut(s) 330, 427, 1851, 1971, 2215
BssNI GRCGYC 2 cut(s) 610, 1637
BssT1I CCWWGG 2 cut(s) 211, 441
Bst2UI CCWGG 3 cut(s) 118, 836, 2348
Bst4CI ACNGT 7 cut(s) 124, 618, 628, 748, 887, 1980, 2199
BstACI GRCGYC 2 cut(s) 610, 1637
BstAFI CTTAAG 1 cut(s) 1082
BstAPI GCANNNNNTGC 3 cut(s) 944, 2318, 2583
BstAUI TGTACA 1 cut(s) 882
BstBAI YACGTR 1 cut(s) 464
BstC8I GCNNGC 7 cut(s) 253, 1318, 1720, 2026, 2069, 2073, 2172
BstFNI CGCG 1 cut(s) 2486
BstH2I RGCGCY 1 cut(s) 2224
BstHHI GCGC 2 cut(s) 2223, 2486
BstKTI GATC 5 cut(s) 333, 430, 1854, 1974, 2218
BstMAI GTCTC 3 cut(s) 221, 1581, 1775
BstMBI GATC 5 cut(s) 330, 427, 1851, 1971, 2215
BstMCI CGRYCG 1 cut(s) 2490
BstNI CCWGG 3 cut(s) 118, 836, 2348
BstNSI RCATGY 2 cut(s) 241, 1691
BstPAI GACNNNNGTC 1 cut(s) 1548
BstSCI CCNGG 7 cut(s) 116, 417, 834, 1967, 2272, 2346, 2539
BstSFI CTRYAG 1 cut(s) 2195
BstSLI GKGCMC 2 cut(s) 1267, 1318
BstUI CGCG 1 cut(s) 2486
BstV1I GCAGC 6 cut(s) 297, 947, 1105, 1247, 2305, 2570
BstV2I GAAGAC 3 cut(s) 157, 1022, 1830
BstX2I RGATCY 1 cut(s) 1851
BstXI CCANNNNNNTGG 3 cut(s) 345, 939, 1211
BstYI RGATCY 1 cut(s) 1851
BstZI CGGCCG 1 cut(s) 2487
BsuRI GGCC 6 cut(s) 111, 839, 1497, 2028, 2184, 2489
BtgZI GCGATG 1 cut(s) 1561
BtrI CACGTC 2 cut(s) 2460, 2502
BtsI GCAGTG 2 cut(s) 18, 439
BtsIMutI CAGTG 7 cut(s) 18, 439, 623, 744, 892, 1804, 1976
Cac8I GCNNGC 7 cut(s) 253, 1318, 1720, 2026, 2069, 2073, 2172
CaiI CAGNNNCTG 1 cut(s) 2334
CfoI GCGC 2 cut(s) 2223, 2486
Cfr10I RCCGGY 2 cut(s) 1025, 2489
Cfr13I GGNCC 2 cut(s) 148, 2035
CseI GACGC 3 cut(s) 599, 1598, 1645
Csp6I GTAC 5 cut(s) 713, 883, 2233, 2505, 2569
CspAI ACCGGT 1 cut(s) 1025
CspCI CAANNNNNGTGG 2 cut(s) 445, 480
CviQI GTAC 5 cut(s) 713, 883, 2233, 2505, 2569
DpnI GATC 5 cut(s) 332, 429, 1853, 1973, 2217
DpnII GATC 5 cut(s) 330, 427, 1851, 1971, 2215
DraI TTTAAA 2 cut(s) 376, 1557
EaeI YGGCCR 2 cut(s) 109, 2487
EagI CGGCCG 1 cut(s) 2487
EclXI CGGCCG 1 cut(s) 2487
Eco130I CCWWGG 2 cut(s) 211, 441
Eco147I AGGCCT 1 cut(s) 1497
Eco47I GGWCC 2 cut(s) 148, 2035
Eco47III AGCGCT 1 cut(s) 2222
Eco52I CGGCCG 1 cut(s) 2487
Eco57I CTGAAG 4 cut(s) 516, 581, 729, 2015
Eco72I CACGTG 1 cut(s) 464
EcoRI GAATTC 2 cut(s) 822, 2144
EcoRII CCWGG 3 cut(s) 116, 834, 2346
EcoT14I CCWWGG 2 cut(s) 211, 441
EcoT22I ATGCAT 2 cut(s) 791, 1510
ErhI CCWWGG 2 cut(s) 211, 441
Esp3I CGTCTC 1 cut(s) 1581
FalI AAGNNNNNCTT 2 cut(s) 311, 343
FaqI GGGAC 1 cut(s) 1091
FauI CCCGC 1 cut(s) 932
FbaI TGATCA 1 cut(s) 330
FblI GTMKAC 2 cut(s) 1091, 2284
Fnu4HI GCNGC 8 cut(s) 109, 286, 936, 1119, 1236, 2319, 2487, 2584
Fsp4HI GCNGC 8 cut(s) 109, 286, 936, 1119, 1236, 2319, 2487, 2584
FspBI CTAG 8 cut(s) 702, 827, 1332, 1499, 1656, 1875, 2114, 2171
GlaI GCGC 2 cut(s) 2222, 2485
GluI GCNGC 8 cut(s) 109, 286, 936, 1119, 1236, 2319, 2487, 2584
GsaI CCCAGC 2 cut(s) 27, 935
GsuI CTGGAG 4 cut(s) 695, 992, 1922, 2369
HaeII RGCGCY 1 cut(s) 2224
HaeIII GGCC 6 cut(s) 111, 839, 1497, 2028, 2184, 2489
HgaI GACGC 3 cut(s) 599, 1598, 1645
HhaI GCGC 2 cut(s) 2223, 2486
Hin1I GRCGYC 2 cut(s) 610, 1637
Hin6I GCGC 2 cut(s) 2221, 2484
HinP1I GCGC 2 cut(s) 2221, 2484
HincII GTYRAC 2 cut(s) 1092, 1537
HindII GTYRAC 2 cut(s) 1092, 1537
HindIII AAGCTT 1 cut(s) 1924
HinfI GANTC 7 cut(s) 1051, 1570, 1604, 2162, 2331, 2361, 2436
HphI GGTGA 3 cut(s) 578, 770, 1390
Hpy99I CGWCG 1 cut(s) 1300
HpyCH4III ACNGT 7 cut(s) 124, 618, 628, 748, 887, 1980, 2199
HpyCH4IV ACGT 4 cut(s) 463, 1790, 2459, 2501
HpySE526I ACGT 4 cut(s) 463, 1790, 2459, 2501
Hsp92I GRCGYC 2 cut(s) 610, 1637
HspAI GCGC 2 cut(s) 2221, 2484
Kpn2I TCCGGA 1 cut(s) 2454
Ksp22I TGATCA 1 cut(s) 330
Kzo9I GATC 5 cut(s) 330, 427, 1851, 1971, 2215
LmnI GCTCC 5 cut(s) 403, 811, 1011, 1181, 2341
Lsp1109I GCAGC 6 cut(s) 297, 947, 1105, 1247, 2305, 2570
MaeI CTAG 8 cut(s) 702, 827, 1332, 1499, 1656, 1875, 2114, 2171
MaeII ACGT 4 cut(s) 463, 1790, 2459, 2501
MaeIII GTNAC 9 cut(s) 124, 175, 459, 689, 887, 905, 1042, 1327, 2302
MalI GATC 5 cut(s) 332, 429, 1853, 1973, 2217
MboI GATC 5 cut(s) 330, 427, 1851, 1971, 2215
MboII GAAGA 8 cut(s) 157, 667, 1022, 1590, 1835, 1861, 2042, 2316
MflI RGATCY 1 cut(s) 1851
MhlI GDGCHC 4 cut(s) 1008, 1267, 1318, 2346
MlyI GAGTC 2 cut(s) 1598, 2325
Mph1103I ATGCAT 2 cut(s) 791, 1510
MroI TCCGGA 1 cut(s) 2454
MroXI GAANNNNTTC 1 cut(s) 480
MslI CAYNNNNRTG 2 cut(s) 648, 1209
MspA1I CMGCKG 1 cut(s) 1843
MspCI CTTAAG 1 cut(s) 1082
MspR9I CCNGG 7 cut(s) 118, 419, 836, 1969, 2274, 2348, 2541
MssI GTTTAAAC 1 cut(s) 376
Mva1269I GAATGC 1 cut(s) 2555
MvaI CCWGG 3 cut(s) 118, 836, 2348
MvnI CGCG 1 cut(s) 2486
NciI CCSGG 4 cut(s) 419, 1969, 2274, 2541
NdeII GATC 5 cut(s) 330, 427, 1851, 1971, 2215
NheI GCTAGC 1 cut(s) 2170
NlaIV GGNNCC 2 cut(s) 1293, 1411
NmuCI GTSAC 6 cut(s) 124, 459, 689, 887, 905, 1042
NsiI ATGCAT 2 cut(s) 791, 1510
NspI RCATGY 2 cut(s) 241, 1691
PceI AGGCCT 1 cut(s) 1497
PciI ACATGT 1 cut(s) 237
PctI GAATGC 1 cut(s) 2555
PdmI GAANNNNTTC 1 cut(s) 480
PfeI GAWTC 5 cut(s) 1051, 1570, 2162, 2361, 2436
Pfl23II CGTACG 1 cut(s) 2568
PflMI CCANNNNNTGG 1 cut(s) 509
PinAI ACCGGT 1 cut(s) 1025
PkrI GCNGC 8 cut(s) 110, 287, 937, 1120, 1237, 2320, 2488, 2585
PleI GAGTC 2 cut(s) 1598, 2325
PmaCI CACGTG 1 cut(s) 464
PmeI GTTTAAAC 1 cut(s) 376
PmlI CACGTG 1 cut(s) 464
PpsI GAGTC 2 cut(s) 1598, 2325
Ppu21I YACGTR 1 cut(s) 464
PscI ACATGT 1 cut(s) 237
PshAI GACNNNNGTC 1 cut(s) 1548
PsiI TTATAA 1 cut(s) 1565
Psp6I CCWGG 3 cut(s) 116, 834, 2346
PspCI CACGTG 1 cut(s) 464
PspFI CCCAGC 2 cut(s) 23, 931
PspGI CCWGG 3 cut(s) 116, 834, 2346
PspLI CGTACG 1 cut(s) 2568
PspN4I GGNNCC 2 cut(s) 1293, 1411
PspPI GGNCC 2 cut(s) 148, 2035
PstNI CAGNNNCTG 1 cut(s) 2334
PsuI RGATCY 1 cut(s) 1851
PvuII CAGCTG 1 cut(s) 1843
RsaI GTAC 5 cut(s) 714, 884, 2234, 2506, 2570
RsaNI GTAC 5 cut(s) 713, 883, 2233, 2505, 2569
RseI CAYNNNNRTG 2 cut(s) 648, 1209
SalI GTCGAC 1 cut(s) 1090
SatI GCNGC 8 cut(s) 109, 286, 936, 1119, 1236, 2319, 2487, 2584
Sau3AI GATC 5 cut(s) 330, 427, 1851, 1971, 2215
Sau96I GGNCC 2 cut(s) 148, 2035
SchI GAGTC 2 cut(s) 1598, 2325
ScrFI CCNGG 7 cut(s) 118, 419, 836, 1969, 2274, 2348, 2541
SduI GDGCHC 4 cut(s) 1008, 1267, 1318, 2346
SfcI CTRYAG 1 cut(s) 2195
SinI GGWCC 2 cut(s) 148, 2035
SmiMI CAYNNNNRTG 2 cut(s) 648, 1209
SmlI CTYRAG 3 cut(s) 407, 1082, 1136
SmoI CTYRAG 3 cut(s) 407, 1082, 1136
SseBI AGGCCT 1 cut(s) 1497
SsiI CCGC 6 cut(s) 108, 925, 1914, 2038, 2065, 2486
SspI AATATT 1 cut(s) 1676
SspMI CTAG 8 cut(s) 702, 827, 1332, 1499, 1656, 1875, 2114, 2171
StuI AGGCCT 1 cut(s) 1497
StyD4I CCNGG 7 cut(s) 116, 417, 834, 1967, 2272, 2346, 2539
StyI CCWWGG 2 cut(s) 211, 441
TaaI ACNGT 7 cut(s) 124, 618, 628, 748, 887, 1980, 2199
TaiI ACGT 4 cut(s) 466, 1793, 2462, 2504
TaqI TCGA 5 cut(s) 358, 1091, 1124, 1694, 2439
TatI WGTACW 4 cut(s) 712, 882, 2232, 2504
TauI GCSGC 2 cut(s) 111, 2489
TfiI GAWTC 5 cut(s) 1051, 1570, 2162, 2361, 2436
TscAI CASTG 7 cut(s) 18, 439, 623, 751, 892, 1804, 1983
TseFI GTSAC 6 cut(s) 124, 459, 689, 887, 905, 1042
TseI GCWGC 6 cut(s) 285, 935, 1118, 1235, 2318, 2583
Tsp45I GTSAC 6 cut(s) 124, 459, 689, 887, 905, 1042
TspGWI ACGGA 2 cut(s) 1284, 2556
TspRI CASTG 7 cut(s) 18, 439, 623, 751, 892, 1804, 1983
Van91I CCANNNNNTGG 1 cut(s) 509
Vha464I CTTAAG 1 cut(s) 1082
VpaK11BI GGWCC 2 cut(s) 148, 2035
XapI RAATTY 9 cut(s) 822, 913, 952, 1167, 1594, 2045, 2132, 2144, 2398
XceI RCATGY 2 cut(s) 241, 1691
XcmI CCANNNNNNNNNTGG 1 cut(s) 2335
XmiI GTMKAC 2 cut(s) 1091, 2284
XmnI GAANNNNTTC 1 cut(s) 480
XspI CTAG 8 cut(s) 702, 827, 1332, 1499, 1656, 1875, 2114, 2171
Zsp2I ATGCAT 2 cut(s) 791, 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.