Rroxscaffold_5G00339800

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000555
Physical Location & Seq
Forward (+)
8183810 .. 8192300
8491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00339800.1

Sequence Viewer

Length: 2526 bp
ATGAGAGTGGCAGTGATTGGTTCTGGTATCAGTGGTTTGGTCTCAGCCTATATTCTCGCAAAAGATGGGGTTGAAGTGGATCTGTATGAGAAAGAAGACTACTTGGGTGGTCATGCCAGGACGGTCACATTTGATGGCGTCGATTTGGACCTTGGTTTCATGGTCTTCAATCGAGTAACATATCCCAACATGATGGAGTTCTTTGAGAGTCTTGGAGTTGAGATGGAGATATCTGACATGTCCTTCTCGGCAAGCTTAGACAAAGGAAAAGGCTGTGAATGGGGTAGTCGAAATGGTCTGTCGAGCTTGTTTGCACAAAAGAGCAACGTGTTAAATCCATACTTTTGGCAAATGCTTCGAGAAATCACCAAGTTTAAGCATGATGCCGTCAGTTATCTTGAGGTGCATGAGAACAATCCGGACATTGATCGAAATGAAACCTTGGGGAAATTTATCGAGTCCCGTCACTACTCCAAATTATTTCAGAAGGCTTATCTTGTTCCAATATGTGGTTCAATCTGGTCATGCCCTGCAGAAGGGGTTATGAGCTTCTCAGCCTTCTCCGTTCTTTCGTTTTGTCGCAATCATCATCTACTTCAGCTATTTGGCCGCCCACAATGGTTAACTGTCAGATGGCGTTCACATTGTTATGTGAAGAAGGTTAGAGAAGTGCTGGAGAGTAAAGGGTGTCGGATAAGAACAGGTTGTGAGGTGCATAAAGTTTCCACAACCGATGAGGGTTCCACAGTAGTCTCTGGAGATGATTTTGAGGAAATATACAATGGATGCATAATGGCTGTCCACGCCCCGACGCCTGATATTTTCCTCCATCGTGACAAAGATTTAATGCCCCAGAACCCGGCAGCATGGAGTGCATGGAATTTTCTTGGTAGTACTGACAACAAAGTATGTTTGACATACTGGCTCAATGTGCTTCAGAACCTTGGTGAAACAAGTCTACCATTTCTTGTGACTCTCAATCCAGATCATACACCAAAACATACCTTGCTTAAGTGGTCAACAAGCCATCCAATCCCATCTGTTGCTGCATCAAAGGCTACTCTTGAGCTTCCTCATATTCAAGGAAAGAGAGGAATCTGGTTTTGTGGAGCATACCAGGGTTATGGCTTCCATGAGGATGGATTAAAGGCTGGAATGGCTGTAGCACATGGTATTCTTGGAAACAGTTGTGCCCTCTTGAGCAACCCGAAACACATGGTTCCATCATTGACAGAAACTGGGGCACGCCTTTTTGTAACTAGATTTATAAGACATTATATCTCTACTGGATGTTTAATATTATTAGAGGAAGGGGGCACAATGTTCAACTTTGAAGGAACAAGAAAAGGGTGTTCTTTAAAATGTGTTCTTAAAGTTCATAATCCTCAGTTTTACTGGAAGGTAATGACACAGGCTGATCTAGGCCTTGCAGATGCATATATCAACGGAGATTTCTCTTTTGTTGACAAAGACAGAGGCCTTCTAAATCTTTTCATGATTCTCATTGCCAACAGAGATAACGATTCTTCTGACTCAAAATTGATTAAGAAAAGGGGATGGTGGACTCCAATGTTGTTCACAGCTAGTATAGCCTCAGCAAAATATTTCTTTCAGCATGTTTCGAGGCAAAATACTCTAACACAGGCTCGGAGGAACATCTCTCGTCATTATGACCTGAGTAATGAACTATTTTCGCTGTTCTTGGACGAAACAATGACGTATTCTAGTGCTGTATTTAAGACAGAAGATGAGGAGCTGAAGATTGCACAGCTAAGGAAAATATCTATTCTCATTGAAAAGGCTAAAATTAGTAAGAACCATGAAGTTCTAGAGATTGGATGTGGTTGGGGAAGCTTGGCTATCGAAGTTGTCAAACAAACGGGTTGCAGATACACAGGCATCACTCTATCTGAGGAACAACTTAAGTTTGCACAACAGAAAGTGAAAGATGCTGGCCTTCAGGACCGGATCAGATTTCTTTTATGTGACTACCGCCAATTGCCTTCTAACTACAAATGTGACAGAATCATATCTTGTGAGATGCTAGAGAGTGTTGGCCACGAATTTATGAATGATTTCTTTGCTTCCTGTGAATCTGTGCTAGCAGCAAATGGGCTTCTTGTTCTTCAGTTCATATCAATACCGGATGAACGCTATGACGAGTACAGACGAAGTTCAGACTTCATAAAGGAGTACATTTTCCCTGGTGGTTGTCTACCTTCATTGAGTAGAGTCACATCAGCCATGGTTGGTTCTTCCAGGCTCTGTGTGGAGCACTTGGAAAATATCGGAATTCATTACTACCAGACACTGAGATATTGGAGAAAAAATTTCTTGGAGAGACAAAGTGAAATATTAGCTCTTGGATTCAACGAGAAATTTATTCGGACATGGGAATACTATTTTGATTATTGCGCTGCTGGTTTCAAGACACATACGCTTGGAAACTACCAGATTGTGTTTTCACGTCCTGGGAATGTTCCAGCATTCAGCAATCCCTACAAAGGCTTCCCTTCTGCATATTGA

Protein Analysis

841

Amino Acids

95.56

Weight (kDa)

7.11

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAO PF01266 2 - 39 3.7e-06 FAD dependent oxidoreductase
NAD_binding_8 PF13450 5 - 71 1.6e-17 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 10 - 270 1.6e-17 Flavin containing amine oxidoreductase
CMAS PF02353 546 - 818 1.1e-79 Mycolic acid cyclopropane synthetase
Methyltransf_23 PF13489 602 - 716 1.4e-06 Methyltransferase domain
Methyltransf_31 PF13847 604 - 713 6e-11 Methyltransferase domain
Methyltransf_25 PF13649 609 - 705 2.1e-15 Methyltransferase domain
Methyltransf_11 PF08241 610 - 709 9.6e-13 Methyltransferase domain
Methyltransf_12 PF08242 610 - 707 9.3e-11 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000555)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23470 AT3G23470 AT3G23470 AT3G23480 AT3G23480 AT3G23480 AT3G23510 AT3G23530
fragaria_vesca FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04310 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_4g04360 FvH4_7g18110 FvH4_7g18140 FvH4_7g18480 FvH4_7g18481
malus_domestica MD16G1224400.v1.1
prunus_persica Prupe.1G045800_v2.0.a1
pyrus_communis pycom16g18780
rosa_chinensis RchiOBHm_Chr1g0325031 RchiOBHm_Chr1g0362281 RchiOBHm_Chr4g0394761 RchiOBHm_Chr4g0394801 RchiOBHm_Chr4g0394871 RchiOBHm_Chr4g0394921 RchiOBHm_Chr4g0394931 RchiOBHm_Chr4g0394941 RchiOBHm_Chr6g0273911
rosa_laevigata RLG00000009657 RLG00000009659 RLG00000009665 RLG00000013591 RLG00000027657
rosa_multiflora Rmu_sc0005356.1_g000006 Rmu_sc0005802.1_g000020 Rmu_sc0007125.1_g000012 Rmu_ssc0000009.1_g000024
rosa_roxburghii Rroxscaffold_5G00339800 Rroxscaffold_5G00339890 Rroxscaffold_7G00194930
rosa_rugosa Rorug01G0197800 Rorug01G0297000 Rorug01G0297100 Rorug03G0360900.1 Rorug03G0361000.1 Rorug03G0361200.1 Rorug03G0361700.1 Rorug03G0361800.1 Rorug03G0361900.1 Rorug04G0078200
rosa_samantha Rh1AG090300 Rh1AG305900 Rh1DG071500 Rh1DG299200 Rh1DG299300 Rh1DG299400 Rh4AG054900 Rh4BG052700 Rh4CG059500 Rh4CG060100 Rh4CG060200 Rh4DG051300 Rh4DG051800 Rh5BG441600 Rh6AG193200 Rh6CG196400
rosa_wichuraiana Rw1G027140 Rw4G003970 Rw4G004380 Rw4G004420 Rw4G004440 Rw6G016840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1268
AccB7I CCANNNNNTGG 1 cut(s) 509
AccI GTMKAC 2 cut(s) 958, 2215
AccIII TCCGGA 1 cut(s) 418
AciI CCGC 2 cut(s) 610, 1993
AclWI GGATC 2 cut(s) 87, 1976
AcoI YGGCCR 2 cut(s) 607, 2056
AcsI RAATTY 6 cut(s) 449, 880, 2063, 2292, 2329, 2378
AcuI CTGAAG 5 cut(s) 581, 920, 1778, 1943, 2111
AcyI GRCGYC 2 cut(s) 138, 812
AfaI GTAC 3 cut(s) 895, 2165, 2195
AfiI CCNNNNNNNGG 4 cut(s) 509, 536, 859, 2504
AflII CTTAAG 2 cut(s) 1010, 1922
AflIII ACRYGT 2 cut(s) 237, 327
AgsI TTSAA 9 cut(s) 74, 169, 516, 1082, 1327, 1334, 1796, 2371, 2428
AjiI CACGTC 1 cut(s) 2468
AjnI CCWGG 5 cut(s) 116, 1116, 2203, 2258, 2470
AjuI GAANNNNNNNTTGG 2 cut(s) 496, 528
Alw21I GWGCWC 1 cut(s) 2277
Alw26I GTCTC 3 cut(s) 46, 757, 2335
AlwI GGATC 2 cut(s) 87, 1976
AlwNI CAGNNNCTG 3 cut(s) 1238, 2265, 2311
Aor13HI TCCGGA 1 cut(s) 418
AoxI GGCC 5 cut(s) 607, 1423, 1477, 1954, 2056
ApeKI GCWGC 4 cut(s) 863, 1046, 2105, 2417
ApoI RAATTY 6 cut(s) 449, 880, 2063, 2292, 2329, 2378
Asp700I GAANNNNTTC 1 cut(s) 2075
AspLEI GCGC 1 cut(s) 2417
AspS9I GGNCC 2 cut(s) 148, 1963
AsuC2I CCSGG 1 cut(s) 860
AsuHPI GGTGA 2 cut(s) 358, 959
AsuNHI GCTAGC 1 cut(s) 2101
AvaII GGWCC 2 cut(s) 148, 1963
BaeGI GKGCMC 3 cut(s) 1195, 1246, 1319
BalI TGGCCA 1 cut(s) 2058
BbsI GAAGAC 2 cut(s) 102, 157
Bbv12I GWGCWC 1 cut(s) 2277
BbvCI CCTCAGC 1 cut(s) 1594
BbvI GCAGC 4 cut(s) 875, 1033, 2117, 2404
BceAI ACGGC 1 cut(s) 371
BcgI CGANNNNNNTGC 2 cut(s) 338, 372
BciT130I CCWGG 5 cut(s) 118, 1118, 2205, 2260, 2472
BcnI CCSGG 1 cut(s) 860
BcoDI GTCTC 3 cut(s) 46, 757, 2335
BfaI CTAG 7 cut(s) 1260, 1421, 1584, 1725, 1829, 2045, 2102
BfmI CTRYAG 2 cut(s) 531, 1161
BfrI CTTAAG 2 cut(s) 1010, 1922
BisI GCNGC 5 cut(s) 610, 864, 1047, 2106, 2418
BlsI GCNGC 5 cut(s) 611, 865, 1048, 2107, 2419
BmcAI AGTACT 1 cut(s) 895
Bme1390I CCNGG 6 cut(s) 118, 860, 1118, 2205, 2260, 2472
Bme18I GGWCC 2 cut(s) 148, 1963
BmgBI CACGTC 1 cut(s) 2468
BmgT120I GGNCC 2 cut(s) 148, 1963
BmiI GGNNCC 2 cut(s) 742, 1221
BmrFI CCNGG 6 cut(s) 118, 860, 1118, 2205, 2260, 2472
BmrI ACTGGG 1 cut(s) 1248
BmsI GCATC 7 cut(s) 373, 776, 1058, 1423, 1908, 1939, 2031
BmtI GCTAGC 1 cut(s) 2105
BmuI ACTGGG 1 cut(s) 1248
BpiI GAAGAC 2 cut(s) 102, 157
BpmI CTGGAG 2 cut(s) 695, 777
Bpu10I CCTNAGC 2 cut(s) 1594, 1772
BpuEI CTTGAG 3 cut(s) 419, 1085, 1219
BpuMI CCSGG 1 cut(s) 860
BsaHI GRCGYC 2 cut(s) 138, 812
BsaI GGTCTC 1 cut(s) 46
BsaJI CCNNGG 7 cut(s) 151, 441, 943, 1117, 2203, 2244, 2471
BsaWI WCCGGW 3 cut(s) 418, 1965, 2143
Bsc4I CCNNNNNNNGG 4 cut(s) 509, 536, 859, 2504
Bse1I ACTGG 4 cut(s) 926, 1243, 1291, 1400
Bse3DI GCAATG 1 cut(s) 1503
BseAI TCCGGA 1 cut(s) 418
BseBI CCWGG 5 cut(s) 118, 1118, 2205, 2260, 2472
BseDI CCNNGG 7 cut(s) 151, 441, 943, 1117, 2203, 2244, 2471
BseGI GGATG 7 cut(s) 791, 1027, 1144, 1295, 1562, 1844, 2152
BseLI CCNNNNNNNGG 4 cut(s) 509, 536, 859, 2504
BseMI GCAATG 1 cut(s) 1503
BseMII CTCAG 7 cut(s) 57, 567, 1400, 1608, 1667, 1902, 2303
BseNI ACTGG 4 cut(s) 926, 1243, 1291, 1400
BseRI GAGGAG 1 cut(s) 1766
BseSI GKGCMC 3 cut(s) 1195, 1246, 1319
BseXI GCAGC 4 cut(s) 875, 1033, 2117, 2404
BshFI GGCC 5 cut(s) 609, 1425, 1479, 1956, 2058
BsiHKAI GWGCWC 1 cut(s) 2277
BsiSI CCGG 4 cut(s) 419, 860, 1966, 2144
BslFI GGGAC 1 cut(s) 445
BslI CCNNNNNNNGG 4 cut(s) 509, 536, 859, 2504
BsmAI GTCTC 3 cut(s) 46, 757, 2335
BsmFI GGGAC 1 cut(s) 445
BsmI GAATGC 1 cut(s) 2486
BsnI GGCC 5 cut(s) 609, 1425, 1479, 1956, 2058
Bso31I GGTCTC 1 cut(s) 46
Bsp1286I GDGCHC 4 cut(s) 1195, 1246, 1319, 2277
Bsp13I TCCGGA 1 cut(s) 418
Bsp143I GATC 5 cut(s) 79, 427, 985, 1417, 1968
Bsp19I CCATGG 1 cut(s) 2244
BspACI CCGC 2 cut(s) 610, 1993
BspANI GGCC 5 cut(s) 609, 1425, 1479, 1956, 2058
BspCNI CTCAG 7 cut(s) 56, 566, 1399, 1607, 1668, 1903, 2304
BspEI TCCGGA 1 cut(s) 418
BspHI TCATGA 1 cut(s) 1494
BspLI GGNNCC 2 cut(s) 742, 1221
BspMAI CTGCAG 1 cut(s) 535
BspOI GCTAGC 1 cut(s) 2105
BspPI GGATC 2 cut(s) 87, 1976
BspTI CTTAAG 2 cut(s) 1010, 1922
BspTNI GGTCTC 1 cut(s) 46
BsrDI GCAATG 1 cut(s) 1503
BsrI ACTGG 4 cut(s) 926, 1243, 1291, 1400
BssECI CCNNGG 7 cut(s) 151, 441, 943, 1117, 2203, 2244, 2471
BssMI GATC 5 cut(s) 79, 427, 985, 1417, 1968
BssNI GRCGYC 2 cut(s) 138, 812
BssT1I CCWWGG 4 cut(s) 151, 441, 943, 2244
Bst2UI CCWGG 5 cut(s) 118, 1118, 2205, 2260, 2472
Bst4CI ACNGT 4 cut(s) 124, 628, 748, 1187
BstACI GRCGYC 2 cut(s) 138, 812
BstAFI CTTAAG 2 cut(s) 1010, 1922
BstAPI GCANNNNNTGC 1 cut(s) 872
BstC8I GCNNGC 4 cut(s) 253, 1246, 1954, 2103
BstDEI CTNAG 9 cut(s) 43, 256, 553, 1386, 1594, 1676, 1772, 1911, 2312
BstDSI CCRYGG 1 cut(s) 2244
BstENI CCTNNNNNAGG 1 cut(s) 534
BstF5I GGATG 7 cut(s) 791, 1027, 1144, 1295, 1562, 1844, 2152
BstHHI GCGC 1 cut(s) 2417
BstKTI GATC 5 cut(s) 82, 430, 988, 1420, 1971
BstMAI GTCTC 3 cut(s) 46, 757, 2335
BstMBI GATC 5 cut(s) 79, 427, 985, 1417, 1968
BstMWI GCNNNNNNNGC 6 cut(s) 803, 872, 931, 1055, 1157, 1589
BstNI CCWGG 5 cut(s) 118, 1118, 2205, 2260, 2472
BstNSI RCATGY 2 cut(s) 241, 1619
BstSCI CCNGG 6 cut(s) 116, 858, 1116, 2203, 2258, 2470
BstSFI CTRYAG 2 cut(s) 531, 1161
BstSLI GKGCMC 3 cut(s) 1195, 1246, 1319
BstV1I GCAGC 4 cut(s) 875, 1033, 2117, 2404
BstV2I GAAGAC 2 cut(s) 102, 157
BstX2I RGATCY 1 cut(s) 79
BstXI CCANNNNNNTGG 4 cut(s) 193, 345, 1124, 1139
BstYI RGATCY 1 cut(s) 79
BsuRI GGCC 5 cut(s) 609, 1425, 1479, 1956, 2058
BtgI CCRYGG 1 cut(s) 2244
BtrI CACGTC 1 cut(s) 2468
BtsCI GGATG 7 cut(s) 791, 1027, 1144, 1295, 1562, 1844, 2152
BtsI GCAGTG 1 cut(s) 18
BtsIMutI CAGTG 3 cut(s) 18, 37, 2309
Cac8I GCNNGC 4 cut(s) 253, 1246, 1954, 2103
CaiI CAGNNNCTG 3 cut(s) 1238, 2265, 2311
CciI TCATGA 1 cut(s) 1494
CfoI GCGC 1 cut(s) 2417
Cfr13I GGNCC 2 cut(s) 148, 1963
CseI GACGC 2 cut(s) 127, 820
Csp6I GTAC 3 cut(s) 894, 2164, 2194
CviQI GTAC 3 cut(s) 894, 2164, 2194
DdeI CTNAG 9 cut(s) 43, 256, 553, 1386, 1594, 1676, 1772, 1911, 2312
DpnI GATC 5 cut(s) 81, 429, 987, 1419, 1970
DpnII GATC 5 cut(s) 79, 427, 985, 1417, 1968
DraI TTTAAA 1 cut(s) 1359
EaeI YGGCCR 2 cut(s) 607, 2056
Eco130I CCWWGG 4 cut(s) 151, 441, 943, 2244
Eco147I AGGCCT 2 cut(s) 1425, 1479
Eco31I GGTCTC 1 cut(s) 46
Eco32I GATATC 1 cut(s) 231
Eco47I GGWCC 2 cut(s) 148, 1963
Eco57I CTGAAG 5 cut(s) 581, 920, 1778, 1943, 2111
EcoNI CCTNNNNNAGG 1 cut(s) 534
EcoRI GAATTC 1 cut(s) 2292
EcoRII CCWGG 5 cut(s) 116, 1116, 2203, 2258, 2470
EcoRV GATATC 1 cut(s) 231
EcoT14I CCWWGG 4 cut(s) 151, 441, 943, 2244
EcoT22I ATGCAT 2 cut(s) 791, 1438
ErhI CCWWGG 4 cut(s) 151, 441, 943, 2244
FaqI GGGAC 1 cut(s) 445
FblI GTMKAC 2 cut(s) 958, 2215
Fnu4HI GCNGC 5 cut(s) 610, 864, 1047, 2106, 2418
FokI GGATG 7 cut(s) 798, 1014, 1151, 1302, 1569, 1851, 2159
Fsp4HI GCNGC 5 cut(s) 610, 864, 1047, 2106, 2418
FspBI CTAG 7 cut(s) 1260, 1421, 1584, 1725, 1829, 2045, 2102
GlaI GCGC 1 cut(s) 2416
GluI GCNGC 5 cut(s) 610, 864, 1047, 2106, 2418
GsuI CTGGAG 2 cut(s) 695, 777
HaeIII GGCC 5 cut(s) 609, 1425, 1479, 1956, 2058
HapII CCGG 4 cut(s) 419, 860, 1966, 2144
HgaI GACGC 2 cut(s) 127, 820
HhaI GCGC 1 cut(s) 2417
Hin1I GRCGYC 2 cut(s) 138, 812
Hin6I GCGC 1 cut(s) 2415
HinP1I GCGC 1 cut(s) 2415
HincII GTYRAC 3 cut(s) 624, 1020, 1465
HindII GTYRAC 3 cut(s) 624, 1020, 1465
HindIII AAGCTT 2 cut(s) 253, 1852
HpaI GTTAAC 1 cut(s) 624
HpaII CCGG 4 cut(s) 419, 860, 1966, 2144
HphI GGTGA 2 cut(s) 358, 959
Hpy166II GTNNAC 9 cut(s) 624, 641, 802, 959, 1020, 1465, 1563, 1578, 2216
Hpy8I GTNNAC 9 cut(s) 624, 641, 802, 959, 1020, 1465, 1563, 1578, 2216
Hpy99I CGWCG 2 cut(s) 143, 814
HpyCH4III ACNGT 4 cut(s) 124, 628, 748, 1187
HpyCH4IV ACGT 3 cut(s) 327, 1718, 2467
HpyF10VI GCNNNNNNNGC 6 cut(s) 803, 872, 931, 1055, 1157, 1589
HpyF3I CTNAG 9 cut(s) 43, 256, 553, 1386, 1594, 1676, 1772, 1911, 2312
HpySE526I ACGT 3 cut(s) 327, 1718, 2467
Hsp92I GRCGYC 2 cut(s) 138, 812
HspAI GCGC 1 cut(s) 2415
Kpn2I TCCGGA 1 cut(s) 418
KspAI GTTAAC 1 cut(s) 624
Kzo9I GATC 5 cut(s) 79, 427, 985, 1417, 1968
LmnI GCTCC 3 cut(s) 1109, 1753, 2272
Lsp1109I GCAGC 4 cut(s) 875, 1033, 2117, 2404
LweI GCATC 7 cut(s) 373, 776, 1058, 1423, 1908, 1939, 2031
MaeI CTAG 7 cut(s) 1260, 1421, 1584, 1725, 1829, 2045, 2102
MaeII ACGT 3 cut(s) 327, 1718, 2467
MaeIII GTNAC 9 cut(s) 124, 175, 464, 833, 970, 1255, 1985, 2018, 2233
MalI GATC 5 cut(s) 81, 429, 987, 1419, 1970
MboI GATC 5 cut(s) 79, 427, 985, 1417, 1968
MboII GAAGA 8 cut(s) 107, 157, 667, 1518, 1757, 1771, 2117, 2247
MfeI CAATTG 1 cut(s) 1997
MflI RGATCY 1 cut(s) 79
MhlI GDGCHC 4 cut(s) 1195, 1246, 1319, 2277
MlsI TGGCCA 1 cut(s) 2058
MluNI TGGCCA 1 cut(s) 2058
MlyI GAGTC 6 cut(s) 217, 467, 967, 1526, 1558, 2241
MmeI TCCRAC 1 cut(s) 671
Mox20I TGGCCA 1 cut(s) 2058
Mph1103I ATGCAT 2 cut(s) 791, 1438
MroI TCCGGA 1 cut(s) 418
MroXI GAANNNNTTC 1 cut(s) 2075
MscI TGGCCA 1 cut(s) 2058
MslI CAYNNNNRTG 2 cut(s) 648, 1137
Msp20I TGGCCA 1 cut(s) 2058
MspCI CTTAAG 2 cut(s) 1010, 1922
MspI CCGG 4 cut(s) 419, 860, 1966, 2144
MspR9I CCNGG 6 cut(s) 118, 860, 1118, 2205, 2260, 2472
MunI CAATTG 1 cut(s) 1997
Mva1269I GAATGC 1 cut(s) 2486
MvaI CCWGG 5 cut(s) 118, 1118, 2205, 2260, 2472
MwoI GCNNNNNNNGC 6 cut(s) 803, 872, 931, 1055, 1157, 1589
NciI CCSGG 1 cut(s) 860
NcoI CCATGG 1 cut(s) 2244
NdeII GATC 5 cut(s) 79, 427, 985, 1417, 1968
NheI GCTAGC 1 cut(s) 2101
NlaIV GGNNCC 2 cut(s) 742, 1221
NmeAIII GCCGAG 1 cut(s) 227
NmuCI GTSAC 7 cut(s) 124, 464, 833, 970, 1985, 2018, 2233
NsiI ATGCAT 2 cut(s) 791, 1438
NspI RCATGY 2 cut(s) 241, 1619
PagI TCATGA 1 cut(s) 1494
PceI AGGCCT 2 cut(s) 1425, 1479
PciI ACATGT 1 cut(s) 237
PctI GAATGC 1 cut(s) 2486
PdmI GAANNNNTTC 1 cut(s) 2075
PfeI GAWTC 6 cut(s) 1095, 1498, 1523, 2025, 2093, 2367
PflMI CCANNNNNTGG 1 cut(s) 509
PkrI GCNGC 5 cut(s) 611, 865, 1048, 2107, 2419
PleI GAGTC 6 cut(s) 216, 466, 967, 1526, 1558, 2240
PpsI GAGTC 6 cut(s) 216, 466, 967, 1526, 1558, 2240
PscI ACATGT 1 cut(s) 237
PsiI TTATAA 1 cut(s) 1268
Psp6I CCWGG 5 cut(s) 116, 1116, 2203, 2258, 2470
PspGI CCWGG 5 cut(s) 116, 1116, 2203, 2258, 2470
PspN4I GGNNCC 2 cut(s) 742, 1221
PspPI GGNCC 2 cut(s) 148, 1963
PstI CTGCAG 1 cut(s) 535
PstNI CAGNNNCTG 3 cut(s) 1238, 2265, 2311
PsuI RGATCY 1 cut(s) 79
RsaI GTAC 3 cut(s) 895, 2165, 2195
RsaNI GTAC 3 cut(s) 894, 2164, 2194
RseI CAYNNNNRTG 2 cut(s) 648, 1137
SatI GCNGC 5 cut(s) 610, 864, 1047, 2106, 2418
Sau3AI GATC 5 cut(s) 79, 427, 985, 1417, 1968
Sau96I GGNCC 2 cut(s) 148, 1963
ScaI AGTACT 1 cut(s) 895
SchI GAGTC 6 cut(s) 217, 467, 967, 1526, 1558, 2241
ScrFI CCNGG 6 cut(s) 118, 860, 1118, 2205, 2260, 2472
SduI GDGCHC 4 cut(s) 1195, 1246, 1319, 2277
SfaNI GCATC 7 cut(s) 373, 776, 1058, 1423, 1908, 1939, 2031
SfcI CTRYAG 2 cut(s) 531, 1161
SinI GGWCC 2 cut(s) 148, 1963
SmiMI CAYNNNNRTG 2 cut(s) 648, 1137
SmlI CTYRAG 5 cut(s) 398, 1010, 1064, 1198, 1922
SmoI CTYRAG 5 cut(s) 398, 1010, 1064, 1198, 1922
SseBI AGGCCT 2 cut(s) 1425, 1479
SsiI CCGC 2 cut(s) 610, 1993
SspI AATATT 3 cut(s) 1299, 1604, 2355
SspMI CTAG 7 cut(s) 1260, 1421, 1584, 1725, 1829, 2045, 2102
StuI AGGCCT 2 cut(s) 1425, 1479
StyD4I CCNGG 6 cut(s) 116, 858, 1116, 2203, 2258, 2470
StyI CCWWGG 4 cut(s) 151, 441, 943, 2244
TaaI ACNGT 4 cut(s) 124, 628, 748, 1187
TaiI ACGT 3 cut(s) 330, 1721, 2470
TaqI TCGA 9 cut(s) 141, 172, 289, 302, 358, 430, 456, 1622, 1863
TatI WGTACW 3 cut(s) 893, 2163, 2193
TauI GCSGC 1 cut(s) 612
TfiI GAWTC 6 cut(s) 1095, 1498, 1523, 2025, 2093, 2367
TscAI CASTG 3 cut(s) 18, 37, 2316
TseFI GTSAC 7 cut(s) 124, 464, 833, 970, 1985, 2018, 2233
TseI GCWGC 4 cut(s) 863, 1046, 2105, 2417
Tsp45I GTSAC 7 cut(s) 124, 464, 833, 970, 1985, 2018, 2233
TspGWI ACGGA 2 cut(s) 553, 1461
TspRI CASTG 3 cut(s) 18, 37, 2316
Van91I CCANNNNNTGG 1 cut(s) 509
Vha464I CTTAAG 2 cut(s) 1010, 1922
VpaK11BI GGWCC 2 cut(s) 148, 1963
XagI CCTNNNNNAGG 1 cut(s) 534
XapI RAATTY 6 cut(s) 449, 880, 2063, 2292, 2329, 2378
XbaI TCTAGA 1 cut(s) 1828
XceI RCATGY 2 cut(s) 241, 1619
XcmI CCANNNNNNNNNTGG 1 cut(s) 2266
XmiI GTMKAC 2 cut(s) 958, 2215
XmnI GAANNNNTTC 1 cut(s) 2075
XspI CTAG 7 cut(s) 1260, 1421, 1584, 1725, 1829, 2045, 2102
ZrmI AGTACT 1 cut(s) 895
Zsp2I ATGCAT 2 cut(s) 791, 1438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.