Prupe.1G528600_v2.0.a1

Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic mitochondrial-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
43253705 .. 43256321
2617 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G528600.1

Sequence Viewer

Length: 1209 bp
ATGGTCACCTCCGTCAACCCAAACACAGAGCTCTCTCGTTGCTTTGCTTCTTCCCTCAGACCCTCTTATTCCAAACCCAACTCCAGCCAAACCCAGCTATGCAGACTCTCATCTGGGTCTCTCTCCAACACCTTCTCCGGCCTATCTATGGCTCCATCAACTGAATTTTCCCGCAGCAGACGCATATTTTCACTGTCGAAGAACGAGTCCGGAGAACGTGCAAGTGGACATGGTGGTTTGACGTATAAGGATGCTGGTGTTGATATAGATGCTGGCTCAGAACTTGTTCGACGAATTGCCAAAATGGCTCCTGGGATTGGAGGCTTTGGGGGTCTTTACCCTCTTGGTGATTCATATCTTGTTGCTGGTACAGATGGTGTTGGAACAAAACTTAAACTTGCATTTGATACTGGAATTCATGAAACCATTGGTATTGATTTGGTTGCTATGAGTGTCAATGATATTGTTACTTCTGGAGCAAAGCCGCTATTTTTCCTTGATTATTTTGCTACCAGCCGGCTTGATGTTGATCTTGCTGAAAAGGTTGTAAAAGGTATTGTCGATGGCTGCCAACAATCTGACTGTACTCTTTTAGGTGGAGAGACTGCAGAGATGCCAGATTTTTACGCAGACGGAGAGTATGACCTCAGTGGTTTTGCGGTTGGAATTGTGAAAAAGGATTCAGTGATTGATGGGAAAAACATTGTTATTGGGGATGTCCTCATTGGCCTACCATCCAGTGGGGTTCATTCTAATGGTTTCTCTCTTGTAAGAAGGGTACTGGCTCATAGTGGGCTGTCTCTGAAGGACCAACTACCTGGTGAAGCTATTACATTAGGTGAAGCTTTGATGGCCCCAACCGTAATATACGTTAAGCAGGTGCTTGACATTATCAGCAAGGGAGGTGTAAAGGGGGTAGCCCACATCACAGGGGGTGGTTTCACAGACAATATACCTCGAGTGTTTCCAAAAGGCCTAGGAGCTGTCATCTATAACGGTTCCTGGGAAATCCTACCTGTTTTCAAATGGATCCAAGAGGTGGGAAGAATAGAAGAAGCTGAGATGATGCGAACATTTAACATGGGTATTGGCATGGTTCTTGTTGTGAGTAAAGAGGCATCCCACAGGATACTTGAGGATGGAAATGGAGCTTATAAAGCTTACCGCATTGGTGAGGTTGTAAGAGGTGAAGGAGTGAGTTATAGTTGA

Protein Analysis

403

Amino Acids

42.61

Weight (kDa)

5.63

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1155
AarI CACCTGC 1 cut(s) 868
Acc36I ACCTGC 1 cut(s) 868
AccB7I CCANNNNNTGG 2 cut(s) 740, 1039
AccIII TCCGGA 1 cut(s) 209
AciI CCGC 4 cut(s) 172, 485, 659, 1165
AclWI GGATC 2 cut(s) 1024, 1037
AcsI RAATTY 2 cut(s) 164, 414
AcuI CTGAAG 1 cut(s) 824
AfaI GTAC 3 cut(s) 370, 586, 780
AfiI CCNNNNNNNGG 4 cut(s) 148, 317, 740, 1039
AgsI TTSAA 1 cut(s) 1024
AjnI CCWGG 3 cut(s) 310, 817, 1001
AluBI AGCT 8 cut(s) 31, 97, 827, 845, 983, 1058, 1151, 1160
AluI AGCT 8 cut(s) 31, 97, 827, 845, 983, 1058, 1151, 1160
Alw21I GWGCWC 1 cut(s) 33
Alw26I GTCTC 3 cut(s) 123, 596, 804
AlwI GGATC 2 cut(s) 1024, 1037
Ama87I CYCGRG 1 cut(s) 957
Aor13HI TCCGGA 1 cut(s) 209
AoxI GGCC 4 cut(s) 139, 727, 852, 973
ApeKI GCWGC 2 cut(s) 174, 567
ApoI RAATTY 2 cut(s) 164, 414
ArsI GACNNNNNNTTYG 2 cut(s) 191, 223
Asp700I GAANNNNTTC 1 cut(s) 285
AspA2I CCTAGG 1 cut(s) 976
AspS9I GGNCC 2 cut(s) 808, 853
AsuHPI GGTGA 5 cut(s) 359, 833, 851, 1184, 1199
AvaI CYCGRG 1 cut(s) 957
AvaII GGWCC 1 cut(s) 808
AvrII CCTAGG 1 cut(s) 976
BamHI GGATCC 1 cut(s) 1029
BanII GRGCYC 1 cut(s) 33
Bbv12I GWGCWC 1 cut(s) 33
BbvI GCAGC 2 cut(s) 186, 554
BccI CCATC 7 cut(s) 163, 368, 557, 686, 742, 844, 1133
BciT130I CCWGG 3 cut(s) 312, 819, 1003
BciVI GTATCC 1 cut(s) 1122
BcoDI GTCTC 3 cut(s) 123, 596, 804
BfaI CTAG 1 cut(s) 977
BfmI CTRYAG 1 cut(s) 606
BfuAI ACCTGC 1 cut(s) 868
BfuI GTATCC 1 cut(s) 1122
BglI GCCNNNNNGGC 1 cut(s) 305
BisI GCNGC 3 cut(s) 175, 485, 568
BlnI CCTAGG 1 cut(s) 976
BlsI GCNGC 3 cut(s) 176, 486, 569
Bme1390I CCNGG 3 cut(s) 312, 819, 1003
Bme18I GGWCC 1 cut(s) 808
BmeT110I CYCGRG 1 cut(s) 957
BmgT120I GGNCC 2 cut(s) 808, 853
BmiI GGNNCC 5 cut(s) 153, 309, 855, 1000, 1031
BmrFI CCNGG 3 cut(s) 312, 819, 1003
BmsI GCATC 5 cut(s) 241, 259, 603, 1056, 1127
BpmI CTGGAG 2 cut(s) 67, 495
BpuEI CTTGAG 1 cut(s) 1154
BsaBI GATNNNNATC 2 cut(s) 354, 528
BsaI GGTCTC 1 cut(s) 123
BsaJI CCNNGG 3 cut(s) 311, 976, 1002
BsaWI WCCGGW 1 cut(s) 209
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 4 cut(s) 148, 317, 740, 1039
Bse118I RCCGGY 1 cut(s) 516
Bse1I ACTGG 3 cut(s) 415, 738, 786
Bse8I GATNNNNATC 2 cut(s) 354, 528
BseAI TCCGGA 1 cut(s) 209
BseBI CCWGG 3 cut(s) 312, 819, 1003
BseDI CCNNGG 3 cut(s) 311, 976, 1002
BseGI GGATG 5 cut(s) 256, 721, 734, 1118, 1144
BseJI GATNNNNATC 2 cut(s) 354, 528
BseLI CCNNNNNNNGG 4 cut(s) 148, 317, 740, 1039
BseMII CTCAG 4 cut(s) 70, 291, 661, 1050
BseNI ACTGG 3 cut(s) 415, 738, 786
BseXI GCAGC 2 cut(s) 186, 554
BseYI CCCAGC 1 cut(s) 93
BshFI GGCC 4 cut(s) 141, 729, 854, 975
BsiHKAI GWGCWC 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 957
BsiSI CCGG 3 cut(s) 138, 210, 517
BslI CCNNNNNNNGG 4 cut(s) 148, 317, 740, 1039
BsmAI GTCTC 3 cut(s) 123, 596, 804
BsnI GGCC 4 cut(s) 141, 729, 854, 975
Bso31I GGTCTC 1 cut(s) 123
BsoBI CYCGRG 1 cut(s) 957
Bsp1286I GDGCHC 1 cut(s) 33
Bsp13I TCCGGA 1 cut(s) 209
Bsp143I GATC 2 cut(s) 529, 1029
BspACI CCGC 4 cut(s) 172, 485, 659, 1165
BspANI GGCC 4 cut(s) 141, 729, 854, 975
BspCNI CTCAG 4 cut(s) 69, 290, 660, 1051
BspEI TCCGGA 1 cut(s) 209
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 5 cut(s) 153, 309, 855, 1000, 1031
BspMAI CTGCAG 1 cut(s) 610
BspMI ACCTGC 1 cut(s) 868
BspPI GGATC 2 cut(s) 1024, 1037
BspTNI GGTCTC 1 cut(s) 123
BsrFI RCCGGY 1 cut(s) 516
BsrI ACTGG 3 cut(s) 415, 738, 786
BssAI RCCGGY 1 cut(s) 516
BssECI CCNNGG 3 cut(s) 311, 976, 1002
BssMI GATC 2 cut(s) 529, 1029
BssT1I CCWWGG 1 cut(s) 976
Bst2UI CCWGG 3 cut(s) 312, 819, 1003
Bst4CI ACNGT 4 cut(s) 195, 584, 862, 998
BstC8I GCNNGC 2 cut(s) 274, 518
BstDEI CTNAG 4 cut(s) 56, 277, 647, 1059
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 5 cut(s) 256, 721, 734, 1118, 1144
BstKTI GATC 2 cut(s) 532, 1032
BstMAI GTCTC 3 cut(s) 123, 596, 804
BstMBI GATC 2 cut(s) 529, 1029
BstMWI GCNNNNNNNGC 4 cut(s) 180, 305, 851, 1157
BstNI CCWGG 3 cut(s) 312, 819, 1003
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 3 cut(s) 310, 817, 1001
BstSFI CTRYAG 1 cut(s) 606
BstV1I GCAGC 2 cut(s) 186, 554
BstX2I RGATCY 1 cut(s) 1029
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 1 cut(s) 1029
BsuI GTATCC 1 cut(s) 1122
BsuRI GGCC 4 cut(s) 141, 729, 854, 975
BtsCI GGATG 5 cut(s) 256, 721, 734, 1118, 1144
BtsIMutI CAGTG 4 cut(s) 191, 655, 690, 745
BveI ACCTGC 1 cut(s) 868
Cac8I GCNNGC 2 cut(s) 274, 518
CciI TCATGA 1 cut(s) 418
Cfr10I RCCGGY 1 cut(s) 516
Cfr13I GGNCC 2 cut(s) 808, 853
CseI GACGC 1 cut(s) 189
CsiI ACCWGGT 1 cut(s) 817
Csp6I GTAC 3 cut(s) 369, 585, 779
CviAII CATG 4 cut(s) 230, 419, 1081, 1093
CviQI GTAC 3 cut(s) 369, 585, 779
DdeI CTNAG 4 cut(s) 56, 277, 647, 1059
DpnI GATC 2 cut(s) 531, 1031
DpnII GATC 2 cut(s) 529, 1029
Ecl136II GAGCTC 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 976
Eco147I AGGCCT 1 cut(s) 975
Eco24I GRGCYC 1 cut(s) 33
Eco31I GGTCTC 1 cut(s) 123
Eco47I GGWCC 1 cut(s) 808
Eco53kI GAGCTC 1 cut(s) 31
Eco57I CTGAAG 1 cut(s) 824
Eco88I CYCGRG 1 cut(s) 957
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 31
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 1 cut(s) 414
EcoRII CCWGG 3 cut(s) 310, 817, 1001
EcoT14I CCWWGG 1 cut(s) 976
EcoT38I GRGCYC 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 976
FaeI CATG 4 cut(s) 233, 422, 1084, 1096
FatI CATG 4 cut(s) 229, 418, 1080, 1092
FauI CCCGC 1 cut(s) 179
Fnu4HI GCNGC 3 cut(s) 175, 485, 568
FokI GGATG 5 cut(s) 263, 721, 728, 1105, 1151
FriOI GRGCYC 1 cut(s) 33
Fsp4HI GCNGC 3 cut(s) 175, 485, 568
FspBI CTAG 1 cut(s) 977
GluI GCNGC 3 cut(s) 175, 485, 568
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 2 cut(s) 67, 495
HaeIII GGCC 4 cut(s) 141, 729, 854, 975
HapII CCGG 3 cut(s) 138, 210, 517
HgaI GACGC 1 cut(s) 189
Hin1II CATG 4 cut(s) 233, 422, 1084, 1096
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
HindIII AAGCTT 2 cut(s) 843, 1158
HinfI GANTC 4 cut(s) 105, 206, 350, 680
HpaII CCGG 3 cut(s) 138, 210, 517
HphI GGTGA 5 cut(s) 359, 833, 851, 1184, 1199
Hpy166II GTNNAC 2 cut(s) 16, 227
Hpy188I TCNGA 4 cut(s) 59, 280, 580, 804
Hpy188III TCNNGA 3 cut(s) 210, 419, 474
Hpy8I GTNNAC 2 cut(s) 16, 227
Hpy99I CGWCG 1 cut(s) 294
HpyAV CCTTC 4 cut(s) 142, 768, 799, 1184
HpyCH4III ACNGT 4 cut(s) 195, 584, 862, 998
HpyCH4IV ACGT 3 cut(s) 217, 242, 870
HpyCH4V TGCA 4 cut(s) 102, 221, 401, 608
HpyF10VI GCNNNNNNNGC 4 cut(s) 180, 305, 851, 1157
HpyF3I CTNAG 4 cut(s) 56, 277, 647, 1059
HpySE526I ACGT 3 cut(s) 217, 242, 870
Hsp92II CATG 4 cut(s) 233, 422, 1084, 1096
Kpn2I TCCGGA 1 cut(s) 209
KroI GCCGGC 1 cut(s) 516
KroNI GCCGGC 1 cut(s) 518
Kzo9I GATC 2 cut(s) 529, 1029
LmnI GCTCC 5 cut(s) 157, 313, 476, 980, 1148
Lsp1109I GCAGC 2 cut(s) 186, 554
LweI GCATC 5 cut(s) 241, 259, 603, 1056, 1127
MabI ACCWGGT 1 cut(s) 817
MaeI CTAG 1 cut(s) 977
MaeII ACGT 3 cut(s) 217, 242, 870
MaeIII GTNAC 2 cut(s) 4, 466
MalI GATC 2 cut(s) 531, 1031
MboI GATC 2 cut(s) 529, 1029
MboII GAAGA 4 cut(s) 42, 211, 1056, 1064
MflI RGATCY 1 cut(s) 1029
MhlI GDGCHC 1 cut(s) 33
MluCI AATT 4 cut(s) 164, 294, 414, 666
MlyI GAGTC 2 cut(s) 99, 215
MmeI TCCRAC 3 cut(s) 150, 361, 643
MroI TCCGGA 1 cut(s) 209
MroNI GCCGGC 1 cut(s) 516
MroXI GAANNNNTTC 1 cut(s) 285
MseI TTAA 3 cut(s) 393, 873, 1077
MslI CAYNNNNRTG 1 cut(s) 753
MspI CCGG 3 cut(s) 138, 210, 517
MspR9I CCNGG 3 cut(s) 312, 819, 1003
MvaI CCWGG 3 cut(s) 312, 819, 1003
MwoI GCNNNNNNNGC 4 cut(s) 180, 305, 851, 1157
NaeI GCCGGC 1 cut(s) 518
NdeII GATC 2 cut(s) 529, 1029
NgoMIV GCCGGC 1 cut(s) 516
NlaIII CATG 4 cut(s) 233, 422, 1084, 1096
NlaIV GGNNCC 5 cut(s) 153, 309, 855, 1000, 1031
NmuCI GTSAC 1 cut(s) 4
PaeR7I CTCGAG 1 cut(s) 957
PagI TCATGA 1 cut(s) 418
PaqCI CACCTGC 1 cut(s) 868
PceI AGGCCT 1 cut(s) 975
PdiI GCCGGC 1 cut(s) 518
PdmI GAANNNNTTC 1 cut(s) 285
PfeI GAWTC 2 cut(s) 350, 680
PflMI CCANNNNNTGG 2 cut(s) 740, 1039
PkrI GCNGC 3 cut(s) 176, 486, 569
PleI GAGTC 2 cut(s) 99, 214
PpsI GAGTC 2 cut(s) 99, 214
PsiI TTATAA 1 cut(s) 1155
Psp124BI GAGCTC 1 cut(s) 33
Psp6I CCWGG 3 cut(s) 310, 817, 1001
PspEI GGTNACC 1 cut(s) 4
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 3 cut(s) 310, 817, 1001
PspN4I GGNNCC 5 cut(s) 153, 309, 855, 1000, 1031
PspPI GGNCC 2 cut(s) 808, 853
PspXI VCTCGAGB 1 cut(s) 957
PstI CTGCAG 1 cut(s) 610
PsuI RGATCY 1 cut(s) 1029
RsaI GTAC 3 cut(s) 370, 586, 780
RsaNI GTAC 3 cut(s) 369, 585, 779
RseI CAYNNNNRTG 1 cut(s) 753
SacI GAGCTC 1 cut(s) 33
SaqAI TTAA 3 cut(s) 393, 873, 1077
SatI GCNGC 3 cut(s) 175, 485, 568
Sau3AI GATC 2 cut(s) 529, 1029
Sau96I GGNCC 2 cut(s) 808, 853
SchI GAGTC 2 cut(s) 99, 215
ScrFI CCNGG 3 cut(s) 312, 819, 1003
SduI GDGCHC 1 cut(s) 33
SexAI ACCWGGT 1 cut(s) 817
SfaNI GCATC 5 cut(s) 241, 259, 603, 1056, 1127
SfcI CTRYAG 1 cut(s) 606
Sfr274I CTCGAG 1 cut(s) 957
SinI GGWCC 1 cut(s) 808
SlaI CTCGAG 1 cut(s) 957
SmiMI CAYNNNNRTG 1 cut(s) 753
SmlI CTYRAG 2 cut(s) 957, 1133
SmoI CTYRAG 2 cut(s) 957, 1133
Sse9I AATT 4 cut(s) 164, 294, 414, 666
SseBI AGGCCT 1 cut(s) 975
SsiI CCGC 4 cut(s) 172, 485, 659, 1165
SspMI CTAG 1 cut(s) 977
SstI GAGCTC 1 cut(s) 33
StuI AGGCCT 1 cut(s) 975
StyD4I CCNGG 3 cut(s) 310, 817, 1001
StyI CCWWGG 1 cut(s) 976
TaaI ACNGT 4 cut(s) 195, 584, 862, 998
TaiI ACGT 3 cut(s) 220, 245, 873
TaqI TCGA 4 cut(s) 197, 289, 561, 958
TasI AATT 4 cut(s) 164, 294, 414, 666
TatI WGTACW 1 cut(s) 584
TauI GCSGC 1 cut(s) 487
TfiI GAWTC 2 cut(s) 350, 680
Tru1I TTAA 3 cut(s) 393, 873, 1077
Tru9I TTAA 3 cut(s) 393, 873, 1077
TscAI CASTG 4 cut(s) 198, 655, 690, 745
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 2 cut(s) 174, 567
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 4 cut(s) 342, 407, 435, 737
TspGWI ACGGA 1 cut(s) 648
TspRI CASTG 4 cut(s) 198, 655, 690, 745
Van91I CCANNNNNTGG 2 cut(s) 740, 1039
VpaK11BI GGWCC 1 cut(s) 808
XapI RAATTY 2 cut(s) 164, 414
XhoI CTCGAG 1 cut(s) 957
XmaJI CCTAGG 1 cut(s) 976
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 1 cut(s) 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.