Rorug05G0322100

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000159
Physical Location & Seq
Reverse (-)
38545374 .. 38549517
4144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0322100.1

Sequence Viewer

Length: 1332 bp
ATGGGGTCAGCTTGTTGTGTTGCTGCAAGGGAGAGATCTGACCCGAACAGAACTGGAAATGAAACATTGCGCAGGAATGCCTTATATTCCCCATCATGGAGTTTCCGATATGATAATCGAAGGCGTGTTGCCGGTGAAATTGATACTCCATATCGTGCTTCTCGTGGAACTAGTAGGAATGCTAGCATGGAGTTAAAAGGGGCATTGAGTTCTGAAAGAGGCAATTTTTCTGATTTGGGGAGCCCACTGGAGAATTTTGGTACACCTATCTCCCAAAAGTCCCCCGTTCATGGTGGTGGAATTTGTGCAAGTCTGAGGACTCCGTCTTCAGATCTATCCATGATGAGCAATTATTCTCCAGATGTTAAAAATTTGGCAGAATCACCGGGAATTGAAGATTCATCCGCTCTAAATCCTTCATTATCCATCCCTACAACTATTTCAATACCAACTGCTGAACCTTCTCCTGCCCCCAGCTATCCACTTTTCTCCAACTCAACCCCATCAAGGCGGGCCCGTCGTTCACCAGGACATCAGTTACTGAGACAGATTTCTGACAGTCGAATATTGGGTTTGAAATCTCCAAATAACAACTCAATATCTGAAGGAAGACAATCTTTTGTACTCTCTAGTTGCAGCAATGACTTGGCAACTGGATCCCAAGCTGGGTCATCTGATGGGTGGTCTATGCGCACCTTCTCTGAGCTTGTGGCTTCATCTCAAAGGGAAAGGTGGTCTTTTGACAGTGAGCACTTTGGTTCTATCCATGGAAAGCAAAGTGGTTGTAGCAGCAGGTTCTCATGTTCTCCTTCAGTAGATATGCAGTCTTGTGGGGTCTGCTCAAAGCTCCTAACTGAGAGAACTTCATGGAGCATCCAGAAAATTATTGCCAGCAGTGAGATCTCTGTGGCGGCTGTGTTAGTTTGTGGACATGTTTACCATGCTGAGTGCTTGGAGACTGTGACATTGGAGACTGATAGGTACGACCCGGTTTGCCCAATTTGTATGGTAGGAGAGAAGCAAGTCTGGAAGATGTCAAGAAAAGCGATGAGATCAGAATCTGATTTAAAAGCAAGAAACCACAAGATATCCAAAAATAGAGTTGTGGATAGCTACTTTGATGGTGAATATGATGTTTTTGATCATCAAAAGAACACTGATAGAAAAGGAAAAGTAGTAGCCAAGTTAGAACCCAGTTCCAGTACAAGGAACTCCTTTACTAAGCCTTTCTTGAAACGGCACTTTTCACTTGGATCCAAGTGGAGTAGACCACTTTCGGAAAATGATTCAGCTAGGAAGAAGGGGTTTTGGGCCAGGTATCGTAAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

443

Amino Acids

48.86

Weight (kDa)

9.38

Isoelectric Point (pI)

64.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 71, 692
Acc36I ACCTGC 1 cut(s) 783
AccBSI CCGCTC 1 cut(s) 407
AccI GTMKAC 1 cut(s) 1267
AciI CCGC 3 cut(s) 405, 511, 911
AclWI GGATC 4 cut(s) 651, 664, 1248, 1261
AcsI RAATTY 3 cut(s) 253, 300, 370
AcuI CTGAAG 3 cut(s) 312, 624, 795
AfaI GTAC 4 cut(s) 262, 624, 983, 1204
AfiI CCNNNNNNNGG 5 cut(s) 96, 290, 507, 666, 1206
AflIII ACRYGT 1 cut(s) 931
AgsI TTSAA 4 cut(s) 395, 444, 577, 1234
AhlI ACTAGT 1 cut(s) 170
AjnI CCWGG 2 cut(s) 526, 1313
AluBI AGCT 7 cut(s) 11, 477, 665, 706, 847, 1113, 1292
AluI AGCT 7 cut(s) 11, 477, 665, 706, 847, 1113, 1292
Alw21I GWGCWC 1 cut(s) 753
Alw26I GTCTC 3 cut(s) 538, 950, 965
AlwI GGATC 4 cut(s) 651, 664, 1248, 1261
AlwNI CAGNNNCTG 2 cut(s) 541, 1061
AoxI GGCC 2 cut(s) 513, 1311
ApaI GGGCCC 1 cut(s) 517
ApeKI GCWGC 3 cut(s) 23, 636, 789
ApoI RAATTY 3 cut(s) 253, 300, 370
AspLEI GCGC 2 cut(s) 72, 693
AspS9I GGNCC 3 cut(s) 513, 514, 1311
AsuC2I CCSGG 2 cut(s) 387, 989
AsuHPI GGTGA 4 cut(s) 146, 375, 516, 1136
AsuNHI GCTAGC 1 cut(s) 182
BaeGI GKGCMC 1 cut(s) 517
BamHI GGATCC 2 cut(s) 656, 1253
BanII GRGCYC 2 cut(s) 245, 517
BauI CACGAG 1 cut(s) 162
BbsI GAAGAC 2 cut(s) 318, 616
Bbv12I GWGCWC 1 cut(s) 753
BbvI GCAGC 3 cut(s) 10, 648, 801
BccI CCATC 5 cut(s) 100, 434, 511, 671, 1115
BceAI ACGGC 1 cut(s) 1253
BciT130I CCWGG 2 cut(s) 528, 1315
BclI TGATCA 1 cut(s) 1141
BcnI CCSGG 2 cut(s) 387, 989
BcoDI GTCTC 3 cut(s) 538, 950, 965
BcuI ACTAGT 1 cut(s) 170
BfaI CTAG 4 cut(s) 171, 183, 630, 1293
BfuAI ACCTGC 1 cut(s) 783
BglII AGATCT 3 cut(s) 35, 331, 900
BisI GCNGC 4 cut(s) 24, 637, 790, 912
BlsI GCNGC 4 cut(s) 25, 638, 791, 913
Bme1390I CCNGG 4 cut(s) 387, 528, 989, 1315
BmgT120I GGNCC 3 cut(s) 513, 514, 1311
BmiI GGNNCC 4 cut(s) 242, 515, 658, 1255
BmrFI CCNGG 4 cut(s) 387, 528, 989, 1315
BmrI ACTGGG 1 cut(s) 1188
BmsI GCATC 1 cut(s) 882
BmtI GCTAGC 1 cut(s) 186
BmuI ACTGGG 1 cut(s) 1188
BpiI GAAGAC 2 cut(s) 318, 616
BpmI CTGGAG 2 cut(s) 269, 342
BpuMI CCSGG 2 cut(s) 387, 989
BsaBI GATNNNNATC 1 cut(s) 1057
BsaJI CCNNGG 1 cut(s) 766
Bsc4I CCNNNNNNNGG 5 cut(s) 96, 290, 507, 666, 1206
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 5 cut(s) 58, 252, 658, 1194, 1200
Bse3DI GCAATG 2 cut(s) 65, 646
Bse8I GATNNNNATC 1 cut(s) 1057
BseBI CCWGG 2 cut(s) 528, 1315
BseDI CCNNGG 1 cut(s) 766
BseGI GGATG 3 cut(s) 401, 426, 873
BseJI GATNNNNATC 1 cut(s) 1057
BseLI CCNNNNNNNGG 5 cut(s) 96, 290, 507, 666, 1206
BseMI GCAATG 2 cut(s) 65, 646
BseMII CTCAG 5 cut(s) 305, 533, 693, 846, 936
BseNI ACTGG 5 cut(s) 58, 252, 658, 1194, 1200
BseSI GKGCMC 1 cut(s) 517
BseXI GCAGC 3 cut(s) 10, 648, 801
BseYI CCCAGC 2 cut(s) 473, 665
BshFI GGCC 2 cut(s) 515, 1313
BsiHKAI GWGCWC 1 cut(s) 753
BsiSI CCGG 3 cut(s) 132, 386, 989
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 5 cut(s) 96, 290, 507, 666, 1206
BsmAI GTCTC 3 cut(s) 538, 950, 965
BsmFI GGGAC 1 cut(s) 265
BsmI GAATGC 2 cut(s) 82, 184
BsnI GGCC 2 cut(s) 515, 1313
Bsp120I GGGCCC 1 cut(s) 513
Bsp1286I GDGCHC 3 cut(s) 245, 517, 753
Bsp143I GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
Bsp19I CCATGG 1 cut(s) 766
BspACI CCGC 3 cut(s) 405, 511, 911
BspANI GGCC 2 cut(s) 515, 1313
BspCNI CTCAG 5 cut(s) 306, 534, 694, 847, 937
BspLI GGNNCC 4 cut(s) 242, 515, 658, 1255
BspMI ACCTGC 1 cut(s) 783
BspOI GCTAGC 1 cut(s) 186
BspPI GGATC 4 cut(s) 651, 664, 1248, 1261
BsrBI CCGCTC 1 cut(s) 407
BsrDI GCAATG 2 cut(s) 65, 646
BsrFI RCCGGY 1 cut(s) 131
BsrI ACTGG 5 cut(s) 58, 252, 658, 1194, 1200
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 1 cut(s) 766
BssMI GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
BssSI CACGAG 1 cut(s) 162
BssT1I CCWWGG 1 cut(s) 766
Bst2BI CACGAG 1 cut(s) 162
Bst2UI CCWGG 2 cut(s) 528, 1315
Bst4CI ACNGT 3 cut(s) 560, 746, 961
BstC8I GCNNGC 3 cut(s) 184, 513, 892
BstDEI CTNAG 6 cut(s) 314, 542, 702, 855, 945, 1221
BstDSI CCRYGG 1 cut(s) 766
BstF5I GGATG 3 cut(s) 401, 426, 873
BstHHI GCGC 2 cut(s) 72, 693
BstKTI GATC 7 cut(s) 38, 334, 659, 903, 1055, 1144, 1256
BstMAI GTCTC 3 cut(s) 538, 950, 965
BstMBI GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
BstNI CCWGG 2 cut(s) 528, 1315
BstNSI RCATGY 1 cut(s) 935
BstSCI CCNGG 4 cut(s) 385, 526, 987, 1313
BstSLI GKGCMC 1 cut(s) 517
BstV1I GCAGC 3 cut(s) 10, 648, 801
BstV2I GAAGAC 2 cut(s) 318, 616
BstX2I RGATCY 5 cut(s) 35, 331, 656, 900, 1253
BstYI RGATCY 5 cut(s) 35, 331, 656, 900, 1253
BsuRI GGCC 2 cut(s) 515, 1313
BtgI CCRYGG 1 cut(s) 766
BtgZI GCGATG 1 cut(s) 1061
BtsCI GGATG 3 cut(s) 401, 426, 873
BtsI GCAGTG 1 cut(s) 901
BtsIMutI CAGTG 4 cut(s) 245, 751, 901, 1155
BveI ACCTGC 1 cut(s) 783
Cac8I GCNNGC 3 cut(s) 184, 513, 892
CaiI CAGNNNCTG 2 cut(s) 541, 1061
CfoI GCGC 2 cut(s) 72, 693
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 3 cut(s) 513, 514, 1311
Csp6I GTAC 4 cut(s) 261, 623, 982, 1203
CviAII CATG 9 cut(s) 96, 187, 290, 340, 767, 801, 867, 932, 941
CviQI GTAC 4 cut(s) 261, 623, 982, 1203
DdeI CTNAG 6 cut(s) 314, 542, 702, 855, 945, 1221
DpnI GATC 7 cut(s) 37, 333, 658, 902, 1054, 1143, 1255
DpnII GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
DraI TTTAAA 1 cut(s) 1068
Eco130I CCWWGG 1 cut(s) 766
Eco24I GRGCYC 2 cut(s) 245, 517
Eco32I GATATC 1 cut(s) 1089
Eco57I CTGAAG 3 cut(s) 312, 624, 795
EcoRII CCWGG 2 cut(s) 526, 1313
EcoRV GATATC 1 cut(s) 1089
EcoT14I CCWWGG 1 cut(s) 766
EcoT38I GRGCYC 2 cut(s) 245, 517
ErhI CCWWGG 1 cut(s) 766
FaeI CATG 9 cut(s) 99, 190, 293, 343, 770, 804, 870, 935, 944
FalI AAGNNNNNCTT 6 cut(s) 601, 633, 721, 753, 1214, 1246
FaqI GGGAC 1 cut(s) 265
FatI CATG 9 cut(s) 95, 186, 289, 339, 766, 800, 866, 931, 940
FauI CCCGC 1 cut(s) 504
FbaI TGATCA 1 cut(s) 1141
FblI GTMKAC 1 cut(s) 1267
Fnu4HI GCNGC 4 cut(s) 24, 637, 790, 912
FokI GGATG 3 cut(s) 388, 413, 860
FriOI GRGCYC 2 cut(s) 245, 517
Fsp4HI GCNGC 4 cut(s) 24, 637, 790, 912
FspAI RTGCGCAY 1 cut(s) 692
FspBI CTAG 4 cut(s) 171, 183, 630, 1293
FspI TGCGCA 2 cut(s) 71, 692
GlaI GCGC 2 cut(s) 71, 692
GluI GCNGC 4 cut(s) 24, 637, 790, 912
GsaI CCCAGC 2 cut(s) 477, 669
GsuI CTGGAG 2 cut(s) 269, 342
HaeIII GGCC 2 cut(s) 515, 1313
HapII CCGG 3 cut(s) 132, 386, 989
HhaI GCGC 2 cut(s) 72, 693
Hin1II CATG 9 cut(s) 99, 190, 293, 343, 770, 804, 870, 935, 944
Hin6I GCGC 2 cut(s) 70, 691
HinP1I GCGC 2 cut(s) 70, 691
HinfI GANTC 5 cut(s) 319, 380, 398, 1058, 1286
HpaII CCGG 3 cut(s) 132, 386, 989
HphI GGTGA 4 cut(s) 146, 375, 516, 1136
Hpy166II GTNNAC 5 cut(s) 263, 524, 929, 937, 1268
Hpy188III TCNNGA 5 cut(s) 359, 877, 1027, 1038, 1231
Hpy8I GTNNAC 5 cut(s) 263, 524, 929, 937, 1268
Hpy99I CGWCG 1 cut(s) 522
HpyAV CCTTC 7 cut(s) 114, 426, 471, 599, 706, 819, 1294
HpyCH4III ACNGT 3 cut(s) 560, 746, 961
HpyCH4V TGCA 4 cut(s) 26, 308, 636, 823
HpyF3I CTNAG 6 cut(s) 314, 542, 702, 855, 945, 1221
Hsp92II CATG 9 cut(s) 99, 190, 293, 343, 770, 804, 870, 935, 944
HspAI GCGC 2 cut(s) 70, 691
Ksp22I TGATCA 1 cut(s) 1141
Kzo9I GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
LmnI GCTCC 3 cut(s) 240, 852, 870
Lsp1109I GCAGC 3 cut(s) 10, 648, 801
LweI GCATC 1 cut(s) 882
MaeI CTAG 4 cut(s) 171, 183, 630, 1293
MaeIII GTNAC 2 cut(s) 537, 961
MalI GATC 7 cut(s) 37, 333, 658, 902, 1054, 1143, 1255
MbiI CCGCTC 1 cut(s) 407
MboI GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
MboII GAAGA 5 cut(s) 318, 407, 621, 1042, 1309
MflI RGATCY 5 cut(s) 35, 331, 656, 900, 1253
MhlI GDGCHC 3 cut(s) 245, 517, 753
MluCI AATT 9 cut(s) 138, 223, 253, 300, 349, 370, 390, 882, 999
MlyI GAGTC 1 cut(s) 313
MmeI TCCRAC 1 cut(s) 516
MnlI CCTC 2 cut(s) 212, 309
MseI TTAA 3 cut(s) 194, 366, 1067
MslI CAYNNNNRTG 1 cut(s) 294
MspI CCGG 3 cut(s) 132, 386, 989
MspR9I CCNGG 4 cut(s) 387, 528, 989, 1315
Mva1269I GAATGC 2 cut(s) 82, 184
MvaI CCWGG 2 cut(s) 528, 1315
NciI CCSGG 2 cut(s) 387, 989
NcoI CCATGG 1 cut(s) 766
NdeII GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
NheI GCTAGC 1 cut(s) 182
NlaIII CATG 9 cut(s) 99, 190, 293, 343, 770, 804, 870, 935, 944
NlaIV GGNNCC 4 cut(s) 242, 515, 658, 1255
NmuCI GTSAC 1 cut(s) 961
NsbI TGCGCA 2 cut(s) 71, 692
NspI RCATGY 1 cut(s) 935
PciI ACATGT 1 cut(s) 931
PcsI WCGNNNNNNNCGW 1 cut(s) 160
PctI GAATGC 2 cut(s) 82, 184
PfeI GAWTC 4 cut(s) 380, 398, 1058, 1286
PflFI GACNNNGTC 1 cut(s) 322
PkrI GCNGC 4 cut(s) 25, 638, 791, 913
PleI GAGTC 1 cut(s) 313
PpsI GAGTC 1 cut(s) 313
PscI ACATGT 1 cut(s) 931
Psp6I CCWGG 2 cut(s) 526, 1313
PspFI CCCAGC 2 cut(s) 473, 665
PspGI CCWGG 2 cut(s) 526, 1313
PspN4I GGNNCC 4 cut(s) 242, 515, 658, 1255
PspOMI GGGCCC 1 cut(s) 513
PspPI GGNCC 3 cut(s) 513, 514, 1311
PstNI CAGNNNCTG 2 cut(s) 541, 1061
PsuI RGATCY 5 cut(s) 35, 331, 656, 900, 1253
PsyI GACNNNGTC 1 cut(s) 322
RsaI GTAC 4 cut(s) 262, 624, 983, 1204
RsaNI GTAC 4 cut(s) 261, 623, 982, 1203
RseI CAYNNNNRTG 1 cut(s) 294
SaqAI TTAA 3 cut(s) 194, 366, 1067
SatI GCNGC 4 cut(s) 24, 637, 790, 912
Sau3AI GATC 7 cut(s) 35, 331, 656, 900, 1052, 1141, 1253
Sau96I GGNCC 3 cut(s) 513, 514, 1311
SchI GAGTC 1 cut(s) 313
ScrFI CCNGG 4 cut(s) 387, 528, 989, 1315
SduI GDGCHC 3 cut(s) 245, 517, 753
SfaNI GCATC 1 cut(s) 882
SmiMI CAYNNNNRTG 1 cut(s) 294
SpeI ACTAGT 1 cut(s) 170
Sse9I AATT 9 cut(s) 138, 223, 253, 300, 349, 370, 390, 882, 999
SsiI CCGC 3 cut(s) 405, 511, 911
SspI AATATT 1 cut(s) 567
SspMI CTAG 4 cut(s) 171, 183, 630, 1293
StyD4I CCNGG 4 cut(s) 385, 526, 987, 1313
StyI CCWWGG 1 cut(s) 766
TaaI ACNGT 3 cut(s) 560, 746, 961
TaqI TCGA 2 cut(s) 118, 562
TasI AATT 9 cut(s) 138, 223, 253, 300, 349, 370, 390, 882, 999
TatI WGTACW 2 cut(s) 622, 1202
TauI GCSGC 1 cut(s) 914
TfiI GAWTC 4 cut(s) 380, 398, 1058, 1286
Tru1I TTAA 3 cut(s) 194, 366, 1067
Tru9I TTAA 3 cut(s) 194, 366, 1067
TscAI CASTG 4 cut(s) 252, 751, 901, 1162
TseFI GTSAC 1 cut(s) 961
TseI GCWGC 3 cut(s) 23, 636, 789
Tsp45I GTSAC 1 cut(s) 961
TspDTI ATGAA 6 cut(s) 75, 278, 390, 408, 705, 855
TspGWI ACGGA 1 cut(s) 312
TspRI CASTG 4 cut(s) 252, 751, 901, 1162
Tth111I GACNNNGTC 1 cut(s) 322
XapI RAATTY 3 cut(s) 253, 300, 370
XceI RCATGY 1 cut(s) 935
XmiI GTMKAC 1 cut(s) 1267
XspI CTAG 4 cut(s) 171, 183, 630, 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.