Rorug06G0421500

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000159
Physical Location & Seq
Reverse (-)
55997537 .. 56000622
3086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0421500.1

Sequence Viewer

Length: 1452 bp
ATGAACTCCTCCTTACTTTTCTTGACTCTTCTAACTCTTCTTTTCGTCTCTAACCCATCTTCTTCTTCTTCTTCAACCCAAGTGTTTGAAGCTTGGTGCAAAGAGTATGGCAAGTCATACTCTTCAGAACTAGAAGAGCTTTACAGGCGCAGTGTGTTTGAGCAAAACCTTGCCTTGATTACCCAACACAACGAAATGGCTTTTTCTTATACCCTTTCCCTGAATTCGTTTTCTGATATGACCCAAAATGAGTTCAGGGCCTCTCGCTTAGGCTTCAGGCCTATATTTCTCACTATTGAGCACAATGCAGAGAAGAAATCCAGTGTGGCTAGTGATGTTCCTTCTTCAATGGATTGGAGGGAGAAAGGGGCTGTGACTAGTGTTAAAGATCAAGGGGATTGTGGTTCTTCTTGGGCGTTCTCGGCTATTGGTGCCATCGAAGGTATCAACAAGATTGTGACTGGATCACTTATCAGCCTCTCTGAACAAGAGTTGATGGATTGTAACAAAGGTCTCACAACTAGAGGCTGCAGCGGAGGACAAGTAGCCAGTGCATTTCAATTTGTCATGAAAAACAAGGGAATTGACACTGATATGGACTACCCGTATCAAGCTTGGGATATGGACTGCAATCAGGAAAAGGTAAATAGGCGTGTTGTGACGATTGATTCTTTTAAATATGTGCCCCTATATGATGAGGAACAACTACTACAAGCTGTGGCAAGGCAACCTGTGAGTGCAAGTATCGCTGCCAGTAGCTTTGCTTTTCAGTTCTACTCAAAGGGGATTGTCACTGGTTCATGTTCGACTTTGTTGGATCATGCTGTATTAATCGTAGGTTATGGTTCAGAAAATGGAGTGGACTATTGGATTTTAAAGAATTCATGGGGCAAACGTTGGGGAATGGATGGCTATATGTATCTGCAACGTGATCATGGAAATCGCAAAGGGCTCTGTGGTATCAACATGTTTGCTTTATATCCAATAAAGACTGGTGCAAATCCTCCTCCACCAGGTCCTGTGAATTGTGATAGTAATGGAGGGGAAACCTGCTGTTGTTGGATGTGGTTTCGTGGAACATGCCGTTCTTGGACATGTTGTGACAACTTTGGTGTCTGTTGTGAGGATCTCATTCACTGTTGCCCCCCTGAGTATCCAATTTGTGATACAGAAAGGAAATTGTGCTTGCAGGCTTATGGGAACTTAACAATGAAAGTGCATGAGAGTAGAAGCAGTGCTAGGAAGTTGGGTACAAGCAATGTTGCTCGGAAGTTGGGTACAGGCAGTGTTGCTGGGAAGTCATGGCAACCACGACTACAGCCTTTCTTTATTGGGGATTGGCCTATACCGATCCCTCCTAGCCCTGTTCAAGTAATACTGACGAACAATGTGTCATACTTCTTGCCAGGGAATAATTCTTCTGCTGATCGATCCAAATCGATTCAGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

483

Amino Acids

53.62

Weight (kDa)

6.34

Isoelectric Point (pI)

39.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 29 - 85 8e-18 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 113 - 329 4.6e-76 Papain family cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1058
AccB1I GGYRCC 1 cut(s) 431
AciI CCGC 1 cut(s) 534
AclI AACGTT 1 cut(s) 895
AclWI GGATC 5 cut(s) 472, 825, 1134, 1345, 1425
AcsI RAATTY 2 cut(s) 223, 880
AcuI CTGAAG 2 cut(s) 108, 259
AfaI GTAC 2 cut(s) 1252, 1279
AfiI CCNNNNNNNGG 1 cut(s) 1013
AflIII ACRYGT 2 cut(s) 966, 1094
AgsI TTSAA 5 cut(s) 75, 89, 348, 560, 1370
AhlI ACTAGT 1 cut(s) 377
AjnI CCWGG 2 cut(s) 1012, 1405
AluBI AGCT 5 cut(s) 92, 139, 614, 716, 759
AluI AGCT 5 cut(s) 92, 139, 614, 716, 759
Alw21I GWGCWC 1 cut(s) 303
Alw26I GTCTC 2 cut(s) 52, 518
AlwI GGATC 5 cut(s) 472, 825, 1134, 1345, 1425
AlwNI CAGNNNCTG 1 cut(s) 1019
AoxI GGCC 3 cut(s) 258, 278, 1340
ApeKI GCWGC 3 cut(s) 528, 531, 749
ApoI RAATTY 2 cut(s) 223, 880
ArsI GACNNNNNNTTYG 2 cut(s) 1376, 1408
AseI ATTAAT 1 cut(s) 830
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 2 cut(s) 258, 1016
AvaII GGWCC 1 cut(s) 1016
BaeGI GKGCMC 1 cut(s) 687
BanI GGYRCC 1 cut(s) 431
BanII GRGCYC 1 cut(s) 954
Bbv12I GWGCWC 1 cut(s) 303
BbvI GCAGC 3 cut(s) 515, 543, 736
BccI CCATC 4 cut(s) 64, 443, 490, 902
BceAI ACGGC 1 cut(s) 1068
BciT130I CCWGG 2 cut(s) 1014, 1407
BciVI GTATCC 1 cut(s) 1164
BclI TGATCA 1 cut(s) 931
BcoDI GTCTC 2 cut(s) 52, 518
BcuI ACTAGT 1 cut(s) 377
BfaI CTAG 6 cut(s) 131, 330, 378, 522, 1239, 1359
BfmI CTRYAG 2 cut(s) 529, 1316
BfuAI ACCTGC 1 cut(s) 1058
BfuI GTATCC 1 cut(s) 1164
BisI GCNGC 3 cut(s) 529, 532, 750
BlsI GCNGC 3 cut(s) 530, 533, 751
Bme1390I CCNGG 2 cut(s) 1014, 1407
Bme18I GGWCC 1 cut(s) 1016
BmgT120I GGNCC 2 cut(s) 258, 1016
BmiI GGNNCC 1 cut(s) 433
BmrFI CCNGG 2 cut(s) 1014, 1407
Bpu10I CCTNAGC 1 cut(s) 268
Bsa29I ATCGAT 2 cut(s) 1429, 1439
BsaBI GATNNNNATC 1 cut(s) 1435
BsaI GGTCTC 1 cut(s) 518
BsaJI CCNNGG 1 cut(s) 1406
BsaXI ACNNNNNCTCC 2 cut(s) 528, 558
Bsc4I CCNNNNNNNGG 1 cut(s) 1013
Bse1I ACTGG 6 cut(s) 321, 466, 549, 753, 799, 997
Bse3DI GCAATG 1 cut(s) 1264
Bse8I GATNNNNATC 1 cut(s) 1435
BseBI CCWGG 2 cut(s) 1014, 1407
BseCI ATCGAT 2 cut(s) 1429, 1439
BseDI CCNNGG 1 cut(s) 1406
BseGI GGATG 2 cut(s) 913, 1068
BseJI GATNNNNATC 1 cut(s) 1435
BseLI CCNNNNNNNGG 1 cut(s) 1013
BseMI GCAATG 1 cut(s) 1264
BseMII CTCAG 1 cut(s) 1140
BseNI ACTGG 6 cut(s) 321, 466, 549, 753, 799, 997
BseRI GAGGAG 1 cut(s) 996
BseSI GKGCMC 1 cut(s) 687
BseXI GCAGC 3 cut(s) 515, 543, 736
BseYI CCCAGC 1 cut(s) 1292
BshFI GGCC 3 cut(s) 260, 280, 1342
BshNI GGYRCC 1 cut(s) 431
BshVI ATCGAT 2 cut(s) 1429, 1439
BsiHKAI GWGCWC 1 cut(s) 303
BslI CCNNNNNNNGG 1 cut(s) 1013
BsmAI GTCTC 2 cut(s) 52, 518
BsmBI CGTCTC 1 cut(s) 52
BsnI GGCC 3 cut(s) 260, 280, 1342
Bso31I GGTCTC 1 cut(s) 518
Bsp1286I GDGCHC 3 cut(s) 303, 687, 954
Bsp143I GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
BspACI CCGC 1 cut(s) 534
BspANI GGCC 3 cut(s) 260, 280, 1342
BspCNI CTCAG 1 cut(s) 1141
BspDI ATCGAT 2 cut(s) 1429, 1439
BspHI TCATGA 1 cut(s) 567
BspLI GGNNCC 1 cut(s) 433
BspMAI CTGCAG 1 cut(s) 533
BspMI ACCTGC 1 cut(s) 1058
BspPI GGATC 5 cut(s) 472, 825, 1134, 1345, 1425
BspQI GCTCTTC 1 cut(s) 129
BspT107I GGYRCC 1 cut(s) 431
BspTNI GGTCTC 1 cut(s) 518
BsrDI GCAATG 1 cut(s) 1264
BsrI ACTGG 6 cut(s) 321, 466, 549, 753, 799, 997
BssECI CCNNGG 1 cut(s) 1406
BssMI GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
Bst2UI CCWGG 2 cut(s) 1014, 1407
Bst4CI ACNGT 1 cut(s) 1139
Bst6I CTCTTC 4 cut(s) 33, 42, 127, 129
BstC8I GCNNGC 2 cut(s) 1187, 1191
BstDEI CTNAG 2 cut(s) 268, 1149
BstENI CCTNNNNNAGG 1 cut(s) 1011
BstF5I GGATG 2 cut(s) 913, 1068
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 8 cut(s) 391, 467, 820, 934, 1129, 1353, 1429, 1433
BstMAI GTCTC 2 cut(s) 52, 518
BstMBI GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
BstMWI GCNNNNNNNGC 4 cut(s) 145, 422, 431, 746
BstNI CCWGG 2 cut(s) 1014, 1407
BstNSI RCATGY 3 cut(s) 970, 1083, 1098
BstSCI CCNGG 2 cut(s) 1012, 1405
BstSFI CTRYAG 2 cut(s) 529, 1316
BstSLI GKGCMC 1 cut(s) 687
BstV1I GCAGC 3 cut(s) 515, 543, 736
BstX2I RGATCY 1 cut(s) 1126
BstYI RGATCY 1 cut(s) 1126
Bsu15I ATCGAT 2 cut(s) 1429, 1439
BsuI GTATCC 1 cut(s) 1164
BsuRI GGCC 3 cut(s) 260, 280, 1342
BsuTUI ATCGAT 2 cut(s) 1429, 1439
BtsCI GGATG 2 cut(s) 913, 1068
BtsI GCAGTG 3 cut(s) 157, 1240, 1291
BtsIMutI CAGTG 8 cut(s) 157, 328, 556, 588, 792, 1135, 1240, 1291
BveI ACCTGC 1 cut(s) 1058
Cac8I GCNNGC 2 cut(s) 1187, 1191
CaiI CAGNNNCTG 1 cut(s) 1019
CciI TCATGA 1 cut(s) 567
CfoI GCGC 1 cut(s) 150
Cfr13I GGNCC 2 cut(s) 258, 1016
ClaI ATCGAT 2 cut(s) 1429, 1439
CsiI ACCWGGT 1 cut(s) 1012
Csp6I GTAC 2 cut(s) 1251, 1278
CviQI GTAC 2 cut(s) 1251, 1278
DdeI CTNAG 2 cut(s) 268, 1149
DpnI GATC 8 cut(s) 390, 466, 819, 933, 1128, 1352, 1428, 1432
DpnII GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
DraI TTTAAA 2 cut(s) 676, 876
Eam1104I CTCTTC 4 cut(s) 33, 42, 127, 129
EarI CTCTTC 4 cut(s) 33, 42, 127, 129
Eco147I AGGCCT 1 cut(s) 280
Eco24I GRGCYC 1 cut(s) 954
Eco31I GGTCTC 1 cut(s) 518
Eco47I GGWCC 1 cut(s) 1016
Eco57I CTGAAG 2 cut(s) 108, 259
EcoNI CCTNNNNNAGG 1 cut(s) 1011
EcoO109I RGGNCCY 2 cut(s) 258, 1016
EcoRI GAATTC 2 cut(s) 223, 880
EcoRII CCWGG 2 cut(s) 1012, 1405
EcoT38I GRGCYC 1 cut(s) 954
Esp3I CGTCTC 1 cut(s) 52
FbaI TGATCA 1 cut(s) 931
Fnu4HI GCNGC 3 cut(s) 529, 532, 750
FokI GGATG 2 cut(s) 920, 1075
FriOI GRGCYC 1 cut(s) 954
Fsp4HI GCNGC 3 cut(s) 529, 532, 750
FspBI CTAG 6 cut(s) 131, 330, 378, 522, 1239, 1359
GlaI GCGC 1 cut(s) 149
GluI GCNGC 3 cut(s) 529, 532, 750
GsaI CCCAGC 1 cut(s) 1296
HaeIII GGCC 3 cut(s) 260, 280, 1342
HhaI GCGC 1 cut(s) 150
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
HindIII AAGCTT 2 cut(s) 90, 612
HinfI GANTC 3 cut(s) 25, 668, 1441
Hpy166II GTNNAC 1 cut(s) 862
Hpy188I TCNGA 5 cut(s) 127, 235, 484, 850, 1269
Hpy188III TCNNGA 3 cut(s) 22, 568, 635
Hpy8I GTNNAC 1 cut(s) 862
HpyAV CCTTC 2 cut(s) 351, 434
HpyCH4III ACNGT 1 cut(s) 1139
HpyCH4IV ACGT 2 cut(s) 895, 928
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 422, 431, 746
HpyF3I CTNAG 2 cut(s) 268, 1149
HpySE526I ACGT 2 cut(s) 895, 928
HspAI GCGC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 931
Kzo9I GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
LguI GCTCTTC 1 cut(s) 129
Lsp1109I GCAGC 3 cut(s) 515, 543, 736
MabI ACCWGGT 1 cut(s) 1012
MaeI CTAG 6 cut(s) 131, 330, 378, 522, 1239, 1359
MaeII ACGT 2 cut(s) 895, 928
MaeIII GTNAC 6 cut(s) 373, 457, 503, 658, 790, 1100
MalI GATC 8 cut(s) 390, 466, 819, 933, 1128, 1352, 1428, 1432
MboI GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
MflI RGATCY 1 cut(s) 1126
MhlI GDGCHC 3 cut(s) 303, 687, 954
MluCI AATT 8 cut(s) 223, 560, 582, 880, 1024, 1158, 1178, 1414
MlyI GAGTC 1 cut(s) 19
MmeI TCCRAC 2 cut(s) 795, 1040
MseI TTAA 6 cut(s) 384, 675, 830, 875, 1205, 1450
MslI CAYNNNNRTG 1 cut(s) 593
MspA1I CMGCKG 1 cut(s) 534
MspR9I CCNGG 2 cut(s) 1014, 1407
MvaI CCWGG 2 cut(s) 1014, 1407
MwoI GCNNNNNNNGC 4 cut(s) 145, 422, 431, 746
NdeII GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
NlaIV GGNNCC 1 cut(s) 433
NmeAIII GCCGAG 1 cut(s) 401
NmuCI GTSAC 5 cut(s) 373, 457, 658, 790, 1100
NspI RCATGY 3 cut(s) 970, 1083, 1098
PagI TCATGA 1 cut(s) 567
PceI AGGCCT 1 cut(s) 280
PciI ACATGT 2 cut(s) 966, 1094
PciSI GCTCTTC 1 cut(s) 129
PfeI GAWTC 2 cut(s) 668, 1441
PkrI GCNGC 3 cut(s) 530, 533, 751
PleI GAGTC 1 cut(s) 19
PpsI GAGTC 1 cut(s) 19
PpuMI RGGWCCY 1 cut(s) 1016
PscI ACATGT 2 cut(s) 966, 1094
PshBI ATTAAT 1 cut(s) 830
Psp1406I AACGTT 1 cut(s) 895
Psp5II RGGWCCY 1 cut(s) 1016
Psp6I CCWGG 2 cut(s) 1012, 1405
PspFI CCCAGC 1 cut(s) 1292
PspGI CCWGG 2 cut(s) 1012, 1405
PspN4I GGNNCC 1 cut(s) 433
PspPI GGNCC 2 cut(s) 258, 1016
PspPPI RGGWCCY 1 cut(s) 1016
PsrI GAACNNNNNNTAC 2 cut(s) 693, 725
PstI CTGCAG 1 cut(s) 533
PstNI CAGNNNCTG 1 cut(s) 1019
PsuI RGATCY 1 cut(s) 1126
RsaI GTAC 2 cut(s) 1252, 1279
RsaNI GTAC 2 cut(s) 1251, 1278
RseI CAYNNNNRTG 1 cut(s) 593
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 6 cut(s) 384, 675, 830, 875, 1205, 1450
SatI GCNGC 3 cut(s) 529, 532, 750
Sau3AI GATC 8 cut(s) 388, 464, 817, 931, 1126, 1350, 1426, 1430
Sau96I GGNCC 2 cut(s) 258, 1016
SchI GAGTC 1 cut(s) 19
ScrFI CCNGG 2 cut(s) 1014, 1407
SduI GDGCHC 3 cut(s) 303, 687, 954
SexAI ACCWGGT 1 cut(s) 1012
SfcI CTRYAG 2 cut(s) 529, 1316
SinI GGWCC 1 cut(s) 1016
SmiMI CAYNNNNRTG 1 cut(s) 593
SpeI ACTAGT 1 cut(s) 377
Sse9I AATT 8 cut(s) 223, 560, 582, 880, 1024, 1158, 1178, 1414
SseBI AGGCCT 1 cut(s) 280
SsiI CCGC 1 cut(s) 534
SspMI CTAG 6 cut(s) 131, 330, 378, 522, 1239, 1359
StuI AGGCCT 1 cut(s) 280
StyD4I CCNGG 2 cut(s) 1012, 1405
TaaI ACNGT 1 cut(s) 1139
TaiI ACGT 2 cut(s) 898, 931
TaqI TCGA 4 cut(s) 438, 806, 1429, 1439
TasI AATT 8 cut(s) 223, 560, 582, 880, 1024, 1158, 1178, 1414
TfiI GAWTC 2 cut(s) 668, 1441
Tru1I TTAA 6 cut(s) 384, 675, 830, 875, 1205, 1450
Tru9I TTAA 6 cut(s) 384, 675, 830, 875, 1205, 1450
TscAI CASTG 8 cut(s) 157, 328, 556, 595, 799, 1142, 1240, 1291
TseFI GTSAC 5 cut(s) 373, 457, 658, 790, 1100
TseI GCWGC 3 cut(s) 528, 531, 749
Tsp45I GTSAC 5 cut(s) 373, 457, 658, 790, 1100
TspDTI ATGAA 5 cut(s) 17, 584, 789, 873, 1226
TspRI CASTG 8 cut(s) 157, 328, 556, 595, 799, 1142, 1240, 1291
VpaK11BI GGWCC 1 cut(s) 1016
VspI ATTAAT 1 cut(s) 830
XagI CCTNNNNNAGG 1 cut(s) 1011
XapI RAATTY 2 cut(s) 223, 880
XceI RCATGY 3 cut(s) 970, 1083, 1098
XspI CTAG 6 cut(s) 131, 330, 378, 522, 1239, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.