Prupe.5G227800_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000159
Physical Location & Seq
Forward (+)
17508533 .. 17511367
2835 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G227800.1

Sequence Viewer

Length: 2625 bp
ATGGGGCAATTTGTCTATACCATTGCAGAGAATGTCATGAATGGGCTAGCTTCCTATGCTTACCAAGAAATGTGCTTGGCGTGGGGTGTCACAGATGAACTAAACAAGCTTAAGGACACCTTCTCAAGCATCAAGTTAGTGATCCTGGATGCAGAGGAAAAGCAAAGGAAGGAACTCCATCTGAGCCAATGGCTAGGAAAGCTCAAAGATGTTTGCTACGATGTGGATGACATGCTTAATGACTTTGCATTCAAAGAACTGCAGATGCAAATGCTGATCCTCCGTGGGCGTGGGAGCATCAAAGAACAGGTACGCATATTCTTTTCGGGTTGGAATCCGGTCGTGTTTAATTTCAAAATGGGTCCTAGAATCAAGGACATTAAAGAAAGGTTAGATGTAATAGCAATTGAAAAATCTCAGTTTCATCTAGTGGAGAGAGCTGGAGATTGGCAGAGTCAGAGTGTGCACATAAAGAGGGAGACTCACTCTTTTGTGCAAGCCTATGATGTTATCGGGAGAGAGGACGATAAGAAACAGATTATCATCCATCTCTTCAACTTGACCTTGAAGGAAAAGAGTCGTGATGTCCAGGAAAATGTTTCTGTTATATCGATTACTGGATTAGGAGGTATAGGAAAGACTACCCTAGCTAAATTGGTGTATAATGATCATAGGGTAGTTAAACACTTCGACATGAGAATGTGGGTATGTGTTTCAGACCACTTTGATAATAAAAGACTGGTGCGTGAAATCGTTGCTTCTGCAACTAACCAAAACTGTGGCGATCAAGAAAGTTTTGATCGTGTGCAGAAAAAGTTGCAAAGTGCTTTGAAAGATAAACAATTTTTGTTAGTGTTGGATGATGTTTGGGATAAGGGTCAAATTGGAGTAACAACTGCAAAATGGATTGATTTAAAAGCTTTGTTAAATGTTGGAGCAAACGGGAGTAAAGTCATTGTCACAACGCGTAGCGAATCGGTTGCTTCGATTATGGACTCTGTTTGCGTGCATCAACTGAGAGGTCTTCCCCACGAGAGTTGCATGTCTTTGTTCATAAAAAGGGCATTTGGTCGAAAAGGAGAGGAGCAGCGCCATCCACACTTGATGGAAATTGCACATGGTATTGCAGAGAAGTGCGAAGGGGTTCCTCTAGCCGTAACCACCATGGGGAGCCTGCTGTGTTTGAAAAGGGAGAAACATTTTTGGTCAGAAGTGAGAGACAATGACATATGGAGATTGCCGCAGGGAAACGATGACATTCTACCTGCACTGAAATTAAGCTACGATGCATTGCCATCTTACTTGAAACCTTGTTTTGCCATTTGTTCACTTTTCCCCAAGGATTACGTTTTCCGAAGCACAGATTTAGTGTCGTTGTGGATGGCACAAGGCTTCATTCAATCCTCTAAAGGAAACCAGGAGTTGGAAGAGATCGGCCTAGACTACATAAGGCAATTATGCTCTAGATCTTTATTTCAAATTGATGAAGATTCAATTGATTTTATAGTATTCAAAATGCATGCTCTTGTGCATGATTTAGCCATGTCTGTTTCAGAAGAAGAGTGCTCATCTGTAAACTTCCGTCCTACCTCTGATACCTGTAAAAGGGTCCGACACGTGTCGATGTCGGAGGATGACTTGCCCATGAAGGGGGTACGAGTTCCCGAATTCTTACGTCAGTTGAAGAAAGTGTGGACCATTCTGTTTCCAGTTCCGGGGCATGTAGGTACCTCCAGCAAATCTGTGTTGAAAGCATGCATCTTGAGATTCAAGTACCTACGGGTGCTGGATTTGAGTGGCTTAACTTTTGAGGTGTTACCGAGTTCCATTGGTAAATTGAGCCGCTTGAGATATCTTGACTTGTCGAAAAATCCATTCATAAAGAAGCTTCCAGGTTCCATTTGCAACCTGCTGAATTTGCAGACCTTGCTGCTTTCAAACTGTGAGAAGCTCAGGGAGTTGCCCAGAGACATCGGGAACCTGATCAACCTCAGAACATTGGTGTTAACCACAAATCAGAAGGTTTTGGCAGGAGGAATTGAACGCCTCACCTCTCTTCGATTTTTACAGGTCCACAATTGTAGCTATCTTGAATCTTTGGGCCAAGGCATCCAATGCCTCACTAACCTCCGAATGCTGGTTATTAGCAACTGTGAGAATCTAAAGTCGTTGCCACCCGACATGAAATGCTTAACCGCATTAAAGACTTTGGGTATCTCCGATTGCGAGAAGCTCGACTTGATGACGTCGGGAGGAGGCATTCGAGGTCTTCGATCAGTCTCCATCTCCAAAGCTTCGCGCTTGGAGGCTCTTCCCCATTGGCTTCAAGACTCTGCAAACACCCTGCAGAGCTTGCGTGTTAAGAACTGTGAGGATCTGAAGGAACTTCCAGAGTGGCTGCAAAACTTCAAGTTGCTCCAACAACTGGTGATTGAATATTGCCCTCAATTGTTGGCTTTACCACAAGGGATGTATCACCTGGGTGCATTGAGATTATTGAAGATCGACGGGTGTTCTAAACTGAGCGAAAGATGCAAAAGCAACGAAGGTGCAGATTGGCCCAAGATTGCTCATGTCAGTAAGATTACACTTGACGGAGAAATTATCGCCTCAAAAGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

875

Amino Acids

99.14

Weight (kDa)

8.47

Isoelectric Point (pI)

40.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2249
Acc36I ACCTGC 2 cut(s) 1273, 1917
Acc65I GGTACC 1 cut(s) 1727
AccB1I GGYRCC 1 cut(s) 1727
AccB7I CCANNNNNTGG 2 cut(s) 1423, 2425
AccII CGCG 2 cut(s) 967, 2299
AciI CCGC 3 cut(s) 1241, 1843, 2196
AclWI GGATC 3 cut(s) 136, 271, 2382
AcsI RAATTY 2 cut(s) 1667, 1915
AcuI CTGAAG 1 cut(s) 2399
AcvI CACGTG 1 cut(s) 1618
AcyI GRCGYC 1 cut(s) 2246
AfaI GTAC 4 cut(s) 312, 1656, 1729, 1775
AfiI CCNNNNNNNGG 8 cut(s) 1167, 1423, 1605, 1649, 1650, 1715, 2137, 2425
AflII CTTAAG 1 cut(s) 110
AflIII ACRYGT 3 cut(s) 965, 1615, 1617
AjnI CCWGG 5 cut(s) 144, 588, 1416, 1891, 2478
AleI CACNNNNGTG 1 cut(s) 2481
Alw21I GWGCWC 2 cut(s) 468, 1568
Alw26I GTCTC 4 cut(s) 473, 1212, 1962, 2284
Alw44I GTGCAC 1 cut(s) 464
AlwI GGATC 3 cut(s) 136, 271, 2382
AoxI GGCC 3 cut(s) 1435, 2101, 2558
ApaLI GTGCAC 1 cut(s) 464
ApeKI GCWGC 3 cut(s) 1087, 1930, 2398
ApoI RAATTY 2 cut(s) 1667, 1915
Asp700I GAANNNNTTC 1 cut(s) 1143
Asp718I GGTACC 1 cut(s) 1727
AspLEI GCGC 2 cut(s) 1092, 2301
AspS9I GGNCC 6 cut(s) 362, 1609, 1695, 2071, 2101, 2559
AsuC2I CCSGG 1 cut(s) 1716
AsuHPI GGTGA 3 cut(s) 2041, 2440, 2468
AsuNHI GCTAGC 1 cut(s) 46
AvaII GGWCC 4 cut(s) 362, 1609, 1695, 2071
BaeGI GKGCMC 1 cut(s) 468
BanI GGYRCC 1 cut(s) 1727
BauI CACGAG 1 cut(s) 1031
BbrPI CACGTG 1 cut(s) 1618
BbsI GAAGAC 2 cut(s) 1016, 2261
Bbv12I GWGCWC 2 cut(s) 468, 1568
BbvI GCAGC 3 cut(s) 1099, 1917, 2385
BccI CCATC 7 cut(s) 186, 555, 1099, 1101, 1303, 1375, 2291
BceAI ACGGC 1 cut(s) 1139
BcgI CGANNNNNNTGC 2 cut(s) 962, 996
BciT130I CCWGG 5 cut(s) 146, 590, 1418, 1893, 2480
BclI TGATCA 2 cut(s) 667, 1983
BcnI CCSGG 1 cut(s) 1716
BcoDI GTCTC 4 cut(s) 473, 1212, 1962, 2284
BfaI CTAG 8 cut(s) 47, 194, 366, 428, 647, 1151, 1439, 1464
BfmI CTRYAG 2 cut(s) 260, 2345
BfoI RGCGCY 1 cut(s) 1093
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 2 cut(s) 1273, 1917
BglII AGATCT 1 cut(s) 1466
BisI GCNGC 5 cut(s) 1088, 1241, 1843, 1931, 2399
BlsI GCNGC 5 cut(s) 1089, 1242, 1844, 1932, 2400
Bme1390I CCNGG 6 cut(s) 146, 590, 1418, 1716, 1893, 2480
Bme18I GGWCC 4 cut(s) 362, 1609, 1695, 2071
BmgT120I GGNCC 6 cut(s) 362, 1609, 1695, 2071, 2101, 2559
BmiI GGNNCC 7 cut(s) 363, 1146, 1172, 1610, 1729, 1897, 1979
BmrFI CCNGG 6 cut(s) 146, 590, 1418, 1716, 1893, 2480
BmsI GCATC 9 cut(s) 138, 139, 255, 306, 1018, 1276, 1767, 2118, 2522
BmtI GCTAGC 1 cut(s) 50
BoxI GACNNNNGTC 1 cut(s) 1618
BpiI GAAGAC 2 cut(s) 1016, 2261
BplI GAGNNNNNCTC 4 cut(s) 466, 498, 470, 502
BpmI CTGGAG 2 cut(s) 462, 1717
Bpu10I CCTNAGC 1 cut(s) 1952
BpuEI CTTGAG 3 cut(s) 109, 1783, 1867
BpuMI CCSGG 1 cut(s) 1716
Bsa29I ATCGAT 1 cut(s) 611
BsaAI YACGTR 1 cut(s) 1618
BsaBI GATNNNNATC 1 cut(s) 542
BsaHI GRCGYC 1 cut(s) 2246
BsaJI CCNNGG 6 cut(s) 283, 1164, 1338, 1715, 2104, 2479
BsaWI WCCGGW 1 cut(s) 337
Bsc4I CCNNNNNNNGG 8 cut(s) 1167, 1423, 1605, 1649, 1650, 1715, 2137, 2425
Bse1I ACTGG 4 cut(s) 622, 744, 1709, 2430
Bse3DI GCAATG 2 cut(s) 21, 1289
Bse8I GATNNNNATC 1 cut(s) 542
BseBI CCWGG 5 cut(s) 146, 590, 1418, 1893, 2480
BseCI ATCGAT 1 cut(s) 611
BseDI CCNNGG 6 cut(s) 283, 1164, 1338, 1715, 2104, 2479
BseGI GGATG 9 cut(s) 154, 232, 543, 865, 1093, 1386, 1639, 2109, 2475
BseJI GATNNNNATC 1 cut(s) 542
BseLI CCNNNNNNNGG 8 cut(s) 1167, 1423, 1605, 1649, 1650, 1715, 2137, 2425
BseMI GCAATG 2 cut(s) 21, 1289
BseMII CTCAG 6 cut(s) 173, 431, 1007, 1966, 2005, 2513
BseNI ACTGG 4 cut(s) 622, 744, 1709, 2430
BseRI GAGGAG 2 cut(s) 1097, 2268
BseSI GKGCMC 1 cut(s) 468
BseXI GCAGC 3 cut(s) 1099, 1917, 2385
BsgI GTGCAG 3 cut(s) 827, 1251, 2571
Bsh1236I CGCG 2 cut(s) 967, 2299
Bsh1285I CGRYCG 1 cut(s) 342
BshFI GGCC 3 cut(s) 1437, 2103, 2560
BshNI GGYRCC 1 cut(s) 1727
BshVI ATCGAT 1 cut(s) 611
BsiEI CGRYCG 1 cut(s) 342
BsiHKAI GWGCWC 2 cut(s) 468, 1568
BsiSI CCGG 2 cut(s) 338, 1715
BslI CCNNNNNNNGG 8 cut(s) 1167, 1423, 1605, 1649, 1650, 1715, 2137, 2425
BsmAI GTCTC 4 cut(s) 473, 1212, 1962, 2284
BsmI GAATGC 3 cut(s) 248, 2139, 2259
BsnI GGCC 3 cut(s) 1437, 2103, 2560
Bsp1286I GDGCHC 2 cut(s) 468, 1568
Bsp19I CCATGG 1 cut(s) 1164
BspACI CCGC 3 cut(s) 1241, 1843, 2196
BspANI GGCC 3 cut(s) 1437, 2103, 2560
BspCNI CTCAG 6 cut(s) 174, 430, 1008, 1965, 2004, 2514
BspDI ATCGAT 1 cut(s) 611
BspFNI CGCG 2 cut(s) 967, 2299
BspHI TCATGA 1 cut(s) 36
BspLI GGNNCC 7 cut(s) 363, 1146, 1172, 1610, 1729, 1897, 1979
BspMAI CTGCAG 2 cut(s) 264, 2349
BspMI ACCTGC 2 cut(s) 1273, 1917
BspOI GCTAGC 1 cut(s) 50
BspPI GGATC 3 cut(s) 136, 271, 2382
BspQI GCTCTTC 1 cut(s) 2316
BspT107I GGYRCC 1 cut(s) 1727
BspTI CTTAAG 1 cut(s) 110
BsrDI GCAATG 2 cut(s) 21, 1289
BsrI ACTGG 4 cut(s) 622, 744, 1709, 2430
BssECI CCNNGG 6 cut(s) 283, 1164, 1338, 1715, 2104, 2479
BssNI GRCGYC 1 cut(s) 2246
BssSI CACGAG 1 cut(s) 1031
BssT1I CCWWGG 3 cut(s) 1164, 1338, 2104
Bst2BI CACGAG 1 cut(s) 1031
Bst2UI CCWGG 5 cut(s) 146, 590, 1418, 1893, 2480
Bst4CI ACNGT 4 cut(s) 779, 1943, 2153, 2369
Bst6I CTCTTC 5 cut(s) 557, 1422, 1554, 2061, 2316
BstACI GRCGYC 1 cut(s) 2246
BstAFI CTTAAG 1 cut(s) 110
BstAPI GCANNNNNTGC 3 cut(s) 1927, 2115, 2353
BstBAI YACGTR 1 cut(s) 1618
BstC8I GCNNGC 7 cut(s) 48, 498, 1007, 1175, 1521, 1756, 2354
BstDEI CTNAG 6 cut(s) 182, 417, 1016, 1952, 1991, 2522
BstDSI CCRYGG 2 cut(s) 283, 1164
BstENI CCTNNNNNAGG 1 cut(s) 1603
BstF5I GGATG 9 cut(s) 154, 232, 543, 865, 1093, 1386, 1639, 2109, 2475
BstFNI CGCG 2 cut(s) 967, 2299
BstH2I RGCGCY 1 cut(s) 1093
BstHHI GCGC 2 cut(s) 1092, 2301
BstMAI GTCTC 4 cut(s) 473, 1212, 1962, 2284
BstMCI CGRYCG 1 cut(s) 342
BstMWI GCNNNNNNNGC 7 cut(s) 56, 199, 1918, 1927, 2115, 2353, 2532
BstNI CCWGG 5 cut(s) 146, 590, 1418, 1893, 2480
BstNSI RCATGY 5 cut(s) 235, 1045, 1523, 1724, 1758
BstPAI GACNNNNGTC 1 cut(s) 1618
BstSCI CCNGG 6 cut(s) 144, 588, 1416, 1714, 1891, 2478
BstSFI CTRYAG 2 cut(s) 260, 2345
BstSLI GKGCMC 1 cut(s) 468
BstUI CGCG 2 cut(s) 967, 2299
BstV1I GCAGC 3 cut(s) 1099, 1917, 2385
BstV2I GAAGAC 2 cut(s) 1016, 2261
BstX2I RGATCY 2 cut(s) 1466, 2374
BstXI CCANNNNNNTGG 1 cut(s) 779
BstYI RGATCY 2 cut(s) 1466, 2374
Bsu15I ATCGAT 1 cut(s) 611
BsuRI GGCC 3 cut(s) 1437, 2103, 2560
BsuTUI ATCGAT 1 cut(s) 611
BtgI CCRYGG 2 cut(s) 283, 1164
BtsCI GGATG 9 cut(s) 154, 232, 543, 865, 1093, 1386, 1639, 2109, 2475
BtsIMutI CAGTG 1 cut(s) 1268
BveI ACCTGC 2 cut(s) 1273, 1917
Cac8I GCNNGC 7 cut(s) 48, 498, 1007, 1175, 1521, 1756, 2354
CciI TCATGA 1 cut(s) 36
CfoI GCGC 2 cut(s) 1092, 2301
Cfr13I GGNCC 6 cut(s) 362, 1609, 1695, 2071, 2101, 2559
ClaI ATCGAT 1 cut(s) 611
Csp6I GTAC 4 cut(s) 311, 1655, 1728, 1774
CspCI CAANNNNNGTGG 2 cut(s) 1019, 1054
CviQI GTAC 4 cut(s) 311, 1655, 1728, 1774
DdeI CTNAG 6 cut(s) 182, 417, 1016, 1952, 1991, 2522
DraI TTTAAA 1 cut(s) 915
Eam1104I CTCTTC 5 cut(s) 557, 1422, 1554, 2061, 2316
EarI CTCTTC 5 cut(s) 557, 1422, 1554, 2061, 2316
Eco130I CCWWGG 3 cut(s) 1164, 1338, 2104
Eco32I GATATC 1 cut(s) 1853
Eco47I GGWCC 4 cut(s) 362, 1609, 1695, 2071
Eco57I CTGAAG 1 cut(s) 2399
Eco72I CACGTG 1 cut(s) 1618
EcoNI CCTNNNNNAGG 1 cut(s) 1603
EcoO109I RGGNCCY 1 cut(s) 362
EcoRI GAATTC 1 cut(s) 1667
EcoRII CCWGG 5 cut(s) 144, 588, 1416, 1891, 2478
EcoRV GATATC 1 cut(s) 1853
EcoT14I CCWWGG 3 cut(s) 1164, 1338, 2104
EcoT22I ATGCAT 3 cut(s) 1291, 1521, 1760
ErhI CCWWGG 3 cut(s) 1164, 1338, 2104
FalI AAGNNNNNCTT 4 cut(s) 104, 136, 2222, 2254
FauNDI CATATG 1 cut(s) 1229
FbaI TGATCA 2 cut(s) 667, 1983
Fnu4HI GCNGC 5 cut(s) 1088, 1241, 1843, 1931, 2399
FokI GGATG 9 cut(s) 161, 239, 530, 872, 1080, 1393, 1646, 2096, 2482
Fsp4HI GCNGC 5 cut(s) 1088, 1241, 1843, 1931, 2399
FspBI CTAG 8 cut(s) 47, 194, 366, 428, 647, 1151, 1439, 1464
GlaI GCGC 2 cut(s) 1091, 2300
GluI GCNGC 5 cut(s) 1088, 1241, 1843, 1931, 2399
GsuI CTGGAG 2 cut(s) 462, 1717
HaeII RGCGCY 1 cut(s) 1093
HaeIII GGCC 3 cut(s) 1437, 2103, 2560
HapII CCGG 2 cut(s) 338, 1715
HhaI GCGC 2 cut(s) 1092, 2301
Hin1I GRCGYC 1 cut(s) 2246
Hin6I GCGC 2 cut(s) 1090, 2299
HinP1I GCGC 2 cut(s) 1090, 2299
HincII GTYRAC 1 cut(s) 2007
HindII GTYRAC 1 cut(s) 2007
HindIII AAGCTT 4 cut(s) 107, 918, 1886, 2292
HpaI GTTAAC 1 cut(s) 2007
HpaII CCGG 2 cut(s) 338, 1715
HphI GGTGA 3 cut(s) 2041, 2440, 2468
Hpy166II GTNNAC 6 cut(s) 466, 1328, 1576, 1695, 2007, 2074
Hpy8I GTNNAC 6 cut(s) 466, 1328, 1576, 1695, 2007, 2074
Hpy99I CGWCG 2 cut(s) 2251, 2510
HpyAV CCTTC 8 cut(s) 130, 163, 562, 1133, 1642, 2014, 2374, 2540
HpyCH4III ACNGT 4 cut(s) 779, 1943, 2153, 2369
HpyCH4IV ACGT 4 cut(s) 1347, 1617, 1675, 2246
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 199, 1918, 1927, 2115, 2353, 2532
HpyF3I CTNAG 6 cut(s) 182, 417, 1016, 1952, 1991, 2522
HpySE526I ACGT 4 cut(s) 1347, 1617, 1675, 2246
Hsp92I GRCGYC 1 cut(s) 2246
HspAI GCGC 2 cut(s) 1090, 2299
KpnI GGTACC 1 cut(s) 1731
Ksp22I TGATCA 2 cut(s) 667, 1983
KspAI GTTAAC 1 cut(s) 2007
LguI GCTCTTC 1 cut(s) 2316
LmnI GCTCC 5 cut(s) 294, 935, 1084, 1170, 2421
Lsp1109I GCAGC 3 cut(s) 1099, 1917, 2385
LweI GCATC 9 cut(s) 138, 139, 255, 306, 1018, 1276, 1767, 2118, 2522
MaeI CTAG 8 cut(s) 47, 194, 366, 428, 647, 1151, 1439, 1464
MaeII ACGT 4 cut(s) 1347, 1617, 1675, 2246
MaeIII GTNAC 5 cut(s) 88, 889, 958, 1156, 1815
MfeI CAATTG 4 cut(s) 405, 1494, 2077, 2447
MflI RGATCY 2 cut(s) 1466, 2374
MhlI GDGCHC 2 cut(s) 468, 1568
MluI ACGCGT 1 cut(s) 965
MlyI GAGTC 5 cut(s) 463, 475, 586, 989, 2324
MmeI TCCRAC 7 cut(s) 311, 837, 913, 1404, 1608, 1636, 2443
Mph1103I ATGCAT 3 cut(s) 1291, 1521, 1760
MroXI GAANNNNTTC 1 cut(s) 1143
MslI CAYNNNNRTG 2 cut(s) 698, 2481
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 2 cut(s) 338, 1715
MspR9I CCNGG 6 cut(s) 146, 590, 1418, 1716, 1893, 2480
MunI CAATTG 4 cut(s) 405, 1494, 2077, 2447
Mva1269I GAATGC 3 cut(s) 248, 2139, 2259
MvaI CCWGG 5 cut(s) 146, 590, 1418, 1893, 2480
MvnI CGCG 2 cut(s) 967, 2299
MwoI GCNNNNNNNGC 7 cut(s) 56, 199, 1918, 1927, 2115, 2353, 2532
NciI CCSGG 1 cut(s) 1716
NcoI CCATGG 1 cut(s) 1164
NdeI CATATG 1 cut(s) 1229
NheI GCTAGC 1 cut(s) 46
NlaIV GGNNCC 7 cut(s) 363, 1146, 1172, 1610, 1729, 1897, 1979
NmuCI GTSAC 2 cut(s) 88, 958
NsiI ATGCAT 3 cut(s) 1291, 1521, 1760
NspI RCATGY 5 cut(s) 235, 1045, 1523, 1724, 1758
OliI CACNNNNGTG 1 cut(s) 2481
PaeI GCATGC 2 cut(s) 1523, 1758
PagI TCATGA 1 cut(s) 36
PciSI GCTCTTC 1 cut(s) 2316
PcsI WCGNNNNNNNCGW 2 cut(s) 983, 2269
PctI GAATGC 3 cut(s) 248, 2139, 2259
PdmI GAANNNNTTC 1 cut(s) 1143
PfeI GAWTC 7 cut(s) 334, 369, 974, 1490, 1767, 2093, 2158
PflMI CCANNNNNTGG 2 cut(s) 1423, 2425
PfoI TCCNGGA 2 cut(s) 144, 588
PkrI GCNGC 5 cut(s) 1089, 1242, 1844, 1932, 2400
PleI GAGTC 5 cut(s) 462, 475, 585, 989, 2324
PmaCI CACGTG 1 cut(s) 1618
PmlI CACGTG 1 cut(s) 1618
PpsI GAGTC 5 cut(s) 462, 475, 585, 989, 2324
Ppu21I YACGTR 1 cut(s) 1618
PpuMI RGGWCCY 1 cut(s) 362
PshAI GACNNNNGTC 1 cut(s) 1618
Psp5II RGGWCCY 1 cut(s) 362
Psp6I CCWGG 5 cut(s) 144, 588, 1416, 1891, 2478
PspCI CACGTG 1 cut(s) 1618
PspGI CCWGG 5 cut(s) 144, 588, 1416, 1891, 2478
PspN4I GGNNCC 7 cut(s) 363, 1146, 1172, 1610, 1729, 1897, 1979
PspPI GGNCC 6 cut(s) 362, 1609, 1695, 2071, 2101, 2559
PspPPI RGGWCCY 1 cut(s) 362
PstI CTGCAG 2 cut(s) 264, 2349
PsuI RGATCY 2 cut(s) 1466, 2374
RsaI GTAC 4 cut(s) 312, 1656, 1729, 1775
RsaNI GTAC 4 cut(s) 311, 1655, 1728, 1774
RseI CAYNNNNRTG 2 cut(s) 698, 2481
SapI GCTCTTC 1 cut(s) 2316
SatI GCNGC 5 cut(s) 1088, 1241, 1843, 1931, 2399
Sau96I GGNCC 6 cut(s) 362, 1609, 1695, 2071, 2101, 2559
SchI GAGTC 5 cut(s) 463, 475, 586, 989, 2324
ScrFI CCNGG 6 cut(s) 146, 590, 1418, 1716, 1893, 2480
SduI GDGCHC 2 cut(s) 468, 1568
SfaNI GCATC 9 cut(s) 138, 139, 255, 306, 1018, 1276, 1767, 2118, 2522
SfcI CTRYAG 2 cut(s) 260, 2345
SinI GGWCC 4 cut(s) 362, 1609, 1695, 2071
SmiMI CAYNNNNRTG 2 cut(s) 698, 2481
SmlI CTYRAG 4 cut(s) 110, 124, 1762, 1846
SmoI CTYRAG 4 cut(s) 110, 124, 1762, 1846
SphI GCATGC 2 cut(s) 1523, 1758
SsiI CCGC 3 cut(s) 1241, 1843, 2196
SspI AATATT 1 cut(s) 2438
SspMI CTAG 8 cut(s) 47, 194, 366, 428, 647, 1151, 1439, 1464
StyD4I CCNGG 6 cut(s) 144, 588, 1416, 1714, 1891, 2478
StyI CCWWGG 3 cut(s) 1164, 1338, 2104
TaaI ACNGT 4 cut(s) 779, 1943, 2153, 2369
TaiI ACGT 4 cut(s) 1350, 1620, 1678, 2249
TauI GCSGC 2 cut(s) 1243, 1845
TfiI GAWTC 7 cut(s) 334, 369, 974, 1490, 1767, 2093, 2158
TscAI CASTG 1 cut(s) 1275
TseFI GTSAC 2 cut(s) 88, 958
TseI GCWGC 3 cut(s) 1087, 1930, 2398
Tsp45I GTSAC 2 cut(s) 88, 958
TspDTI ATGAA 9 cut(s) 53, 111, 413, 1042, 1384, 1500, 1661, 1867, 2198
TspGWI ACGGA 3 cut(s) 272, 1571, 2610
TspRI CASTG 1 cut(s) 1275
Van91I CCANNNNNTGG 2 cut(s) 1423, 2425
Vha464I CTTAAG 1 cut(s) 110
VneI GTGCAC 1 cut(s) 464
VpaK11BI GGWCC 4 cut(s) 362, 1609, 1695, 2071
XagI CCTNNNNNAGG 1 cut(s) 1603
XapI RAATTY 2 cut(s) 1667, 1915
XbaI TCTAGA 1 cut(s) 1463
XceI RCATGY 5 cut(s) 235, 1045, 1523, 1724, 1758
XmnI GAANNNNTTC 1 cut(s) 1143
XspI CTAG 8 cut(s) 47, 194, 366, 428, 647, 1151, 1439, 1464
ZraI GACGTC 1 cut(s) 2247
Zsp2I ATGCAT 3 cut(s) 1291, 1521, 1760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.