Rmu_ssc0000119.1_g000023

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000119.1
Physical Location & Seq
Forward (+)
84000 .. 86717
2718 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000119.1_g000023.1.cds

Sequence Viewer

Length: 2718 bp
atggggtttgcctctggcattgctgagacagtcttggttaggctagcctcctatgctgcccaagaagtttgcttggcttggggtgcccaacttgagctcaagaagctcaataagaccttgttagccatcaaacttgtactccaagatggagagaggaagcaaatgcagaaccccctcatcactcattggctaggaaacctcaaagatgtttgcaacgatgctgaggatgtactcgacgaatttgagttccgaaagctccgactcgaagtgctcaccaacgaccaccggagtgccaaagcaaaggtacaccaattcttctcccgttggaatccagtcgtgtttaactttaaaatgggtcataaaatgaaagagattagagaaagactagatgagattgatgctgaaaagacaaagttttctctcattcaagctgttgaactagttgatgattgtggtgagccccaaagggcacatgttaataaaagggagactgactctttactggaaggtcatgttgttggaagagatggtgataaggaaaaaattatccttctctttgatgacaccctttcctccaatgtcgataatgtttcagtcatttccatctttgggttagcagggttgggaaaaaccacactcgctaaatcagtgtataatgatactgcggtggagaagaaatttgatattagaatgtgggtatgcgtctcagaaaactttgatatccatacattagttcgtggcattattgctgcaactaaacaagaatgtgctgttgaaagtttagatcttatgaaaaaggggttgcagggtattttgaaagataaaaagtttttgttagtgttggacgatgtatgggataaagagtcggtgggagttacacatcaaaaatggagtgagttaaaaactgtgttacatgttggagccaaagggagtaaaataatcgtaacaacacgtaatgaatcagtagcttcacttgtgcaccctatacataagcatcagttagaaggtctttctcaggaggattccatgactttatttaaaaacaatgcatttaacaaaggagaggagtcacactatcaacacttgataaaaattggagaagacattgtgaagaagtgtggaggggttcccttagcactagctactctagggagtttacttcactcggaaagggggcgacgtcagtggttacatgtaagagataatgaaatatggagtttgcccgaaaatgacaatattatagctgcactaaaattgagttacaatgcactgccatctcacttgaaaccctgttttgccttttgttcactttaccccaaggattatgaatttggaagtcatgaaattgtccaattatggatggcacaaggcttcctcaagtcttcaagagaaaatgaagattttgacgagatgggcctagactatataaggcagttttgttccaagtctttgtttcaacttgaagctgatttgaagactcttgtgcatttcaaaatccatgatttagtgcatgacttggcaatatcagtggcacgggtagattgctccacaattaatttccgtccctctagtgcttttgaaaaagtccgacacgtgtcaatatcggaaaaagacttgtctggggatgtggcaggagtcccggcattcattctccagtcggcgaaactgcggaccattctaaatctagatagtgaagctgggatctccaatcaatattttctaaagacatgcatcttgagattcaagtatctgcgtgcgctagatgtgcgtcgttctactcttgaggagctaccaagttccatttgtaacttgattcatttaagatatctcaccctggacggaaatgcaaagataaaacagcttcccagttccatttgcaagctcttgaatttgcagttcttaagccttgcccgttgtgaggcacttgaggagttacccaaaggcatagggaacctgatcaatctcagatatttgtatataactacacagcagaagtattttccgaaaggagtatttagacgcctcaccttacttcaatccttgatcattgggaattgtgcgaatctgaaatctctgggagaagagatccaatacctcactaaccttcgtcaactgtggatcgtttactgtgaaaatctggagtccttgccacctaacatgaagaacttgactgcattccatactttggcgatcgctgattgtaagaagcttgagttaatgaggtcgggagtaggcatcaaaggtcttcgatcattacttatccaagatagttcagatttggaggttttgcccaattggcttcaagagtctgcagacactttacagagcatgacaatcgtagtgtgtgataatctcacggcacttccagagtggttgcaaaacctcacgttgctggagcaactgatgattgatgaatgccccaaattgtctgctttgccgcaagggatgcattgcctcactgccttgagagctttggcgattcgcgggtgtcctgaattgagcaaaagatgcgaaagggaaacaggagaggattggtccaagatcaaacatgtccaaaagattgaactcgatgacgaggtgcggataatatcgatgattaggaaacaaattacttgttccactactgtgatgcttttcataaattgtttgcacttcttatcccataagctctttattatttgtcttagatttaatacattctatccgtcaatttcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

905

Amino Acids

102.7

Weight (kDa)

7.13

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1183
AccB1I GGYRCC 1 cut(s) 83
AccB7I CCANNNNNTGG 1 cut(s) 2185
AccII CGCG 1 cut(s) 2484
AciI CCGC 5 cut(s) 665, 1669, 2438, 2484, 2581
AclWI GGATC 3 cut(s) 1709, 2080, 2126
AcsI RAATTY 4 cut(s) 239, 677, 1328, 1888
AcvI CACGTG 1 cut(s) 1594
AcyI GRCGYC 2 cut(s) 1180, 2020
AfaI GTAC 3 cut(s) 138, 231, 306
AfiI CCNNNNNNNGG 3 cut(s) 609, 1918, 2185
AflII CTTAAG 1 cut(s) 1900
AflIII ACRYGT 7 cut(s) 472, 913, 950, 1192, 1591, 1593, 2548
AhlI ACTAGT 1 cut(s) 439
AjnI CCWGG 1 cut(s) 1833
AleI CACNNNNGTG 2 cut(s) 288, 2624
Alw21I GWGCWC 3 cut(s) 99, 273, 981
Alw26I GTCTC 3 cut(s) 20, 482, 709
Alw44I GTGCAC 1 cut(s) 977
AlwI GGATC 3 cut(s) 1709, 2080, 2126
AoxI GGCC 1 cut(s) 1414
ApaLI GTGCAC 1 cut(s) 977
ApeKI GCWGC 3 cut(s) 56, 749, 1244
ApoI RAATTY 4 cut(s) 239, 677, 1328, 1888
AseI ATTAAT 1 cut(s) 1554
AsiSI GCGATCGC 1 cut(s) 2193
AspLEI GCGC 1 cut(s) 1759
AspS9I GGNCC 3 cut(s) 1414, 1671, 2535
AsuC2I CCSGG 1 cut(s) 1640
AsuHPI GGTGA 5 cut(s) 265, 467, 542, 1822, 2017
AsuNHI GCTAGC 1 cut(s) 43
AvaII GGWCC 2 cut(s) 1671, 2535
BaeGI GKGCMC 3 cut(s) 88, 472, 981
BaeI ACNNNNGTAYC 2 cut(s) 651, 684
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 2 cut(s) 99, 462
BbrPI CACGTG 1 cut(s) 1594
BbsI GAAGAC 4 cut(s) 1107, 1374, 1481, 2237
Bbv12I GWGCWC 3 cut(s) 99, 273, 981
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 3 cut(s) 43, 736, 1231
BccI CCATC 7 cut(s) 134, 140, 521, 611, 1282, 1354, 1405
BceAI ACGGC 1 cut(s) 2373
BcgI CGANNNNNNTGC 2 cut(s) 2317, 2351
BciT130I CCWGG 1 cut(s) 1835
BclI TGATCA 2 cut(s) 1956, 2043
BcnI CCSGG 1 cut(s) 1640
BcoDI GTCTC 3 cut(s) 20, 482, 709
BcuI ACTAGT 1 cut(s) 439
BfmI CTRYAG 1 cut(s) 2310
BfrI CTTAAG 1 cut(s) 1900
BglI GCCNNNNNGGC 1 cut(s) 2296
BglII AGATCT 1 cut(s) 784
BisI GCNGC 4 cut(s) 57, 750, 1245, 2438
BlsI GCNGC 4 cut(s) 58, 751, 1246, 2439
Bme1390I CCNGG 2 cut(s) 1640, 1835
Bme18I GGWCC 2 cut(s) 1671, 2535
BmgT120I GGNCC 3 cut(s) 1414, 1671, 2535
BmiI GGNNCC 4 cut(s) 85, 922, 1128, 1952
BmrFI CCNGG 2 cut(s) 1640, 1835
BmrI ACTGGG 1 cut(s) 1860
BmsI GCATC 8 cut(s) 208, 388, 1003, 1740, 2244, 2436, 2498, 2619
BmtI GCTAGC 1 cut(s) 47
BmuI ACTGGG 1 cut(s) 1860
BoxI GACNNNNGTC 1 cut(s) 1594
BpiI GAAGAC 4 cut(s) 1107, 1374, 1481, 2237
BplI GAGNNNNNCTC 2 cut(s) 479, 511
BpmI CTGGAG 3 cut(s) 1637, 2159, 2414
Bpu10I CCTNAGC 2 cut(s) 222, 1132
BpuEI CTTGAG 8 cut(s) 83, 113, 1361, 1756, 1802, 1946, 2231, 2485
BpuMI CCSGG 1 cut(s) 1640
Bsa29I ATCGAT 1 cut(s) 2591
BsaAI YACGTR 2 cut(s) 953, 1594
BsaHI GRCGYC 2 cut(s) 1180, 2020
BsaJI CCNNGG 2 cut(s) 1317, 1833
BsaWI WCCGGW 1 cut(s) 285
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 3 cut(s) 609, 1918, 2185
Bse1I ACTGG 4 cut(s) 332, 507, 1654, 1866
Bse3DI GCAATG 2 cut(s) 18, 2449
BseBI CCWGG 1 cut(s) 1835
BseCI ATCGAT 1 cut(s) 2591
BseDI CCNNGG 2 cut(s) 1317, 1833
BseGI GGATG 4 cut(s) 232, 1365, 1630, 2451
BseLI CCNNNNNNNGG 3 cut(s) 609, 1918, 2185
BseMI GCAATG 2 cut(s) 18, 2449
BseMII CTCAG 5 cut(s) 15, 213, 720, 1028, 1978
BseNI ACTGG 4 cut(s) 332, 507, 1654, 1866
BseRI GAGGAG 3 cut(s) 1079, 1799, 1943
BseSI GKGCMC 3 cut(s) 88, 472, 981
BseXI GCAGC 3 cut(s) 43, 736, 1231
BseYI CCCAGC 1 cut(s) 1697
BsgI GTGCAG 1 cut(s) 1230
Bsh1236I CGCG 1 cut(s) 2484
Bsh1285I CGRYCG 1 cut(s) 2193
BshFI GGCC 1 cut(s) 1416
BshNI GGYRCC 1 cut(s) 83
BshVI ATCGAT 1 cut(s) 2591
BsiEI CGRYCG 1 cut(s) 2193
BsiHKAI GWGCWC 3 cut(s) 99, 273, 981
BsiSI CCGG 2 cut(s) 286, 1640
BslFI GGGAC 2 cut(s) 1548, 1622
BslI CCNNNNNNNGG 3 cut(s) 609, 1918, 2185
BsmAI GTCTC 3 cut(s) 20, 482, 709
BsmBI CGTCTC 1 cut(s) 709
BsmFI GGGAC 2 cut(s) 1548, 1622
BsmI GAATGC 3 cut(s) 1643, 2174, 2420
BsnI GGCC 1 cut(s) 1416
Bsp1286I GDGCHC 6 cut(s) 88, 99, 273, 462, 472, 981
Bsp143I GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
BspACI CCGC 5 cut(s) 665, 1669, 2438, 2484, 2581
BspANI GGCC 1 cut(s) 1416
BspCNI CTCAG 5 cut(s) 16, 214, 719, 1027, 1977
BspDI ATCGAT 1 cut(s) 2591
BspFNI CGCG 1 cut(s) 2484
BspHI TCATGA 1 cut(s) 1339
BspLI GGNNCC 4 cut(s) 85, 922, 1128, 1952
BspMAI CTGCAG 1 cut(s) 2314
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 3 cut(s) 1709, 2080, 2126
BspT107I GGYRCC 1 cut(s) 83
BspTI CTTAAG 1 cut(s) 1900
BsrDI GCAATG 2 cut(s) 18, 2449
BsrI ACTGG 4 cut(s) 332, 507, 1654, 1866
BssECI CCNNGG 2 cut(s) 1317, 1833
BssMI GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
BssNI GRCGYC 2 cut(s) 1180, 2020
BssT1I CCWWGG 1 cut(s) 1317
Bst2UI CCWGG 1 cut(s) 1835
Bst4CI ACNGT 5 cut(s) 31, 907, 2115, 2129, 2626
Bst6I CTCTTC 2 cut(s) 517, 2076
BstACI GRCGYC 2 cut(s) 1180, 2020
BstAFI CTTAAG 1 cut(s) 1900
BstAPI GCANNNNNTGC 2 cut(s) 2446, 2508
BstBAI YACGTR 2 cut(s) 953, 1594
BstC8I GCNNGC 3 cut(s) 45, 1755, 1880
BstDEI CTNAG 7 cut(s) 24, 222, 706, 1014, 1132, 1964, 2684
BstF5I GGATG 4 cut(s) 232, 1365, 1630, 2451
BstFNI CGCG 1 cut(s) 2484
BstHHI GCGC 1 cut(s) 1759
BstKTI GATC 9 cut(s) 787, 1704, 1959, 2046, 2088, 2121, 2193, 2252, 2544
BstMAI GTCTC 3 cut(s) 20, 482, 709
BstMBI GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
BstMCI CGRYCG 1 cut(s) 2193
BstMWI GCNNNNNNNGC 8 cut(s) 53, 83, 103, 1765, 2296, 2446, 2468, 2508
BstNI CCWGG 1 cut(s) 1835
BstNSI RCATGY 5 cut(s) 476, 917, 1196, 1731, 2552
BstPAI GACNNNNGTC 1 cut(s) 1594
BstSCI CCNGG 2 cut(s) 1638, 1833
BstSFI CTRYAG 1 cut(s) 2310
BstSLI GKGCMC 3 cut(s) 88, 472, 981
BstUI CGCG 1 cut(s) 2484
BstV1I GCAGC 3 cut(s) 43, 736, 1231
BstV2I GAAGAC 4 cut(s) 1107, 1374, 1481, 2237
BstX2I RGATCY 3 cut(s) 784, 1701, 2085
BstYI RGATCY 3 cut(s) 784, 1701, 2085
Bsu15I ATCGAT 1 cut(s) 2591
BsuRI GGCC 1 cut(s) 1416
BsuTUI ATCGAT 1 cut(s) 2591
BtsCI GGATG 4 cut(s) 232, 1365, 1630, 2451
BtsI GCAGTG 2 cut(s) 1268, 2457
BtsIMutI CAGTG 5 cut(s) 654, 1190, 1268, 1533, 2457
Cac8I GCNNGC 3 cut(s) 45, 1755, 1880
CciI TCATGA 1 cut(s) 1339
CfoI GCGC 1 cut(s) 1759
Cfr13I GGNCC 3 cut(s) 1414, 1671, 2535
ClaI ATCGAT 1 cut(s) 2591
CseI GACGC 3 cut(s) 691, 1757, 2028
Csp6I GTAC 3 cut(s) 137, 230, 305
CspCI CAANNNNNGTGG 2 cut(s) 1509, 1544
CviQI GTAC 3 cut(s) 137, 230, 305
DdeI CTNAG 7 cut(s) 24, 222, 706, 1014, 1132, 1964, 2684
DpnI GATC 9 cut(s) 786, 1703, 1958, 2045, 2087, 2120, 2192, 2251, 2543
DpnII GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
DraI TTTAAA 2 cut(s) 349, 1039
Eam1104I CTCTTC 2 cut(s) 517, 2076
EarI CTCTTC 2 cut(s) 517, 2076
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 1 cut(s) 1317
Eco24I GRGCYC 2 cut(s) 99, 462
Eco32I GATATC 2 cut(s) 721, 1826
Eco47I GGWCC 2 cut(s) 1671, 2535
Eco53kI GAGCTC 1 cut(s) 97
Eco72I CACGTG 1 cut(s) 1594
EcoICRI GAGCTC 1 cut(s) 97
EcoRII CCWGG 1 cut(s) 1833
EcoRV GATATC 2 cut(s) 721, 1826
EcoT14I CCWWGG 1 cut(s) 1317
EcoT22I ATGCAT 3 cut(s) 1051, 1733, 2451
EcoT38I GRGCYC 2 cut(s) 99, 462
ErhI CCWWGG 1 cut(s) 1317
Esp3I CGTCTC 1 cut(s) 709
FaqI GGGAC 2 cut(s) 1548, 1622
FauI CCCGC 1 cut(s) 2477
FbaI TGATCA 2 cut(s) 1956, 2043
Fnu4HI GCNGC 4 cut(s) 57, 750, 1245, 2438
FokI GGATG 4 cut(s) 239, 1372, 1637, 2458
FriOI GRGCYC 2 cut(s) 99, 462
Fsp4HI GCNGC 4 cut(s) 57, 750, 1245, 2438
GlaI GCGC 1 cut(s) 1758
GluI GCNGC 4 cut(s) 57, 750, 1245, 2438
GsaI CCCAGC 1 cut(s) 1701
GsuI CTGGAG 3 cut(s) 1637, 2159, 2414
HaeIII GGCC 1 cut(s) 1416
HapII CCGG 2 cut(s) 286, 1640
HgaI GACGC 3 cut(s) 691, 1757, 2028
HhaI GCGC 1 cut(s) 1759
Hin1I GRCGYC 2 cut(s) 1180, 2020
Hin6I GCGC 1 cut(s) 1757
HinP1I GCGC 1 cut(s) 1757
HincII GTYRAC 1 cut(s) 2111
HindII GTYRAC 1 cut(s) 2111
HindIII AAGCTT 1 cut(s) 2207
HpaII CCGG 2 cut(s) 286, 1640
HphI GGTGA 5 cut(s) 265, 467, 542, 1822, 2017
Hpy166II GTNNAC 6 cut(s) 307, 979, 1157, 1307, 2111, 2125
Hpy8I GTNNAC 6 cut(s) 307, 979, 1157, 1307, 2111, 2125
Hpy99I CGWCG 3 cut(s) 239, 1182, 1773
HpyAV CCTTC 4 cut(s) 500, 560, 998, 2114
HpyCH4III ACNGT 5 cut(s) 31, 907, 2115, 2129, 2626
HpyCH4IV ACGT 4 cut(s) 952, 1180, 1593, 2387
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 83, 103, 1765, 2296, 2446, 2468, 2508
HpyF3I CTNAG 7 cut(s) 24, 222, 706, 1014, 1132, 1964, 2684
HpySE526I ACGT 4 cut(s) 952, 1180, 1593, 2387
Hsp92I GRCGYC 2 cut(s) 1180, 2020
HspAI GCGC 1 cut(s) 1757
Ksp22I TGATCA 2 cut(s) 1956, 2043
Kzo9I GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
LmnI GCTCC 5 cut(s) 261, 920, 1550, 1786, 2395
Lsp1109I GCAGC 3 cut(s) 43, 736, 1231
LweI GCATC 8 cut(s) 208, 388, 1003, 1740, 2244, 2436, 2498, 2619
MaeII ACGT 4 cut(s) 952, 1180, 1593, 2387
MaeIII GTNAC 8 cut(s) 874, 909, 943, 1068, 1188, 1259, 1805, 1932
MalI GATC 9 cut(s) 786, 1703, 1958, 2045, 2087, 2120, 2192, 2251, 2543
MboI GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
MfeI CAATTG 1 cut(s) 2293
MflI RGATCY 3 cut(s) 784, 1701, 2085
MhlI GDGCHC 6 cut(s) 88, 99, 273, 462, 472, 981
MlyI GAGTC 8 cut(s) 255, 488, 872, 1076, 1471, 1644, 2150, 2315
MmeI TCCRAC 6 cut(s) 283, 305, 499, 822, 898, 1612
Mph1103I ATGCAT 3 cut(s) 1051, 1733, 2451
MslI CAYNNNNRTG 2 cut(s) 288, 2624
MspCI CTTAAG 1 cut(s) 1900
MspI CCGG 2 cut(s) 286, 1640
MspR9I CCNGG 2 cut(s) 1640, 1835
MunI CAATTG 1 cut(s) 2293
Mva1269I GAATGC 3 cut(s) 1643, 2174, 2420
MvaI CCWGG 1 cut(s) 1835
MvnI CGCG 1 cut(s) 2484
MwoI GCNNNNNNNGC 8 cut(s) 53, 83, 103, 1765, 2296, 2446, 2468, 2508
NciI CCSGG 1 cut(s) 1640
NdeII GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 4 cut(s) 85, 922, 1128, 1952
NmuCI GTSAC 1 cut(s) 1068
NsiI ATGCAT 3 cut(s) 1051, 1733, 2451
NspI RCATGY 5 cut(s) 476, 917, 1196, 1731, 2552
OliI CACNNNNGTG 2 cut(s) 288, 2624
PagI TCATGA 1 cut(s) 1339
PciI ACATGT 4 cut(s) 472, 913, 1192, 2548
PctI GAATGC 3 cut(s) 1643, 2174, 2420
PfeI GAWTC 7 cut(s) 328, 959, 1022, 1740, 1813, 2062, 2479
PflMI CCANNNNNTGG 1 cut(s) 2185
PkrI GCNGC 4 cut(s) 58, 751, 1246, 2439
Ple19I CGATCG 1 cut(s) 2193
PleI GAGTC 8 cut(s) 255, 488, 871, 1075, 1471, 1643, 2149, 2314
PmaCI CACGTG 1 cut(s) 1594
PmlI CACGTG 1 cut(s) 1594
PpsI GAGTC 8 cut(s) 255, 488, 871, 1075, 1471, 1643, 2149, 2314
Ppu21I YACGTR 2 cut(s) 953, 1594
PscI ACATGT 4 cut(s) 472, 913, 1192, 2548
PshAI GACNNNNGTC 1 cut(s) 1594
PshBI ATTAAT 1 cut(s) 1554
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 1833
PspCI CACGTG 1 cut(s) 1594
PspFI CCCAGC 1 cut(s) 1697
PspGI CCWGG 1 cut(s) 1833
PspN4I GGNNCC 4 cut(s) 85, 922, 1128, 1952
PspPI GGNCC 3 cut(s) 1414, 1671, 2535
PstI CTGCAG 1 cut(s) 2314
PsuI RGATCY 3 cut(s) 784, 1701, 2085
PvuI CGATCG 1 cut(s) 2193
RgaI GCGATCGC 1 cut(s) 2193
RsaI GTAC 3 cut(s) 138, 231, 306
RsaNI GTAC 3 cut(s) 137, 230, 305
RseI CAYNNNNRTG 2 cut(s) 288, 2624
SacI GAGCTC 1 cut(s) 99
SatI GCNGC 4 cut(s) 57, 750, 1245, 2438
Sau3AI GATC 9 cut(s) 784, 1701, 1956, 2043, 2085, 2118, 2190, 2249, 2541
Sau96I GGNCC 3 cut(s) 1414, 1671, 2535
SchI GAGTC 8 cut(s) 255, 488, 872, 1076, 1471, 1644, 2150, 2315
ScrFI CCNGG 2 cut(s) 1640, 1835
SduI GDGCHC 6 cut(s) 88, 99, 273, 462, 472, 981
SfaAI GCGATCGC 1 cut(s) 2193
SfaNI GCATC 8 cut(s) 208, 388, 1003, 1740, 2244, 2436, 2498, 2619
SfcI CTRYAG 1 cut(s) 2310
SgfI GCGATCGC 1 cut(s) 2193
SinI GGWCC 2 cut(s) 1671, 2535
SmiMI CAYNNNNRTG 2 cut(s) 288, 2624
SmlI CTYRAG 9 cut(s) 92, 98, 1376, 1735, 1781, 1900, 1925, 2210, 2464
SmoI CTYRAG 9 cut(s) 92, 98, 1376, 1735, 1781, 1900, 1925, 2210, 2464
SpeI ACTAGT 1 cut(s) 439
SsiI CCGC 5 cut(s) 665, 1669, 2438, 2484, 2581
SspI AATATT 2 cut(s) 1237, 1715
SstI GAGCTC 1 cut(s) 99
StyD4I CCNGG 2 cut(s) 1638, 1833
StyI CCWWGG 1 cut(s) 1317
TaaI ACNGT 5 cut(s) 31, 907, 2115, 2129, 2626
TaiI ACGT 4 cut(s) 955, 1183, 1596, 2390
TaqI TCGA 6 cut(s) 234, 264, 582, 2248, 2568, 2591
TatI WGTACW 2 cut(s) 136, 229
TauI GCSGC 1 cut(s) 2440
TfiI GAWTC 7 cut(s) 328, 959, 1022, 1740, 1813, 2062, 2479
TscAI CASTG 5 cut(s) 654, 1190, 1275, 1533, 2464
TseFI GTSAC 1 cut(s) 1068
TseI GCWGC 3 cut(s) 56, 749, 1244
Tsp45I GTSAC 1 cut(s) 1068
TspGWI ACGGA 3 cut(s) 1550, 1854, 2694
TspRI CASTG 5 cut(s) 654, 1190, 1275, 1533, 2464
Van91I CCANNNNNTGG 1 cut(s) 2185
Vha464I CTTAAG 1 cut(s) 1900
VneI GTGCAC 1 cut(s) 977
VpaK11BI GGWCC 2 cut(s) 1671, 2535
VspI ATTAAT 1 cut(s) 1554
XapI RAATTY 4 cut(s) 239, 677, 1328, 1888
XbaI TCTAGA 1 cut(s) 1684
XceI RCATGY 5 cut(s) 476, 917, 1196, 1731, 2552
ZraI GACGTC 1 cut(s) 1181
Zsp2I ATGCAT 3 cut(s) 1051, 1733, 2451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.